ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet94a03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1RL40_ORYSA (P35296) 60S ribosomal protein L40 (CEP52) 114 2e-25
2RL40_NICSY (P49636) 60S ribosomal protein L40 (CEP52) 108 7e-24
3RL40_BRARA (P51423) 60S ribosomal protein L40 (CEP52) 108 7e-24
4RL40_ARATH (P19232) 60S ribosomal protein L40 (CEP52) 107 1e-23
5RL40_CHLRE (P14695) 60S ribosomal protein L40 (CEP52) 106 3e-23
6RL40_RAT (P62986) 60S ribosomal protein L40 (CEP52) 100 2e-21
7RL40_PIG (P63053) 60S ribosomal protein L40 (CEP52) 100 2e-21
8RL40_OPHHA (P68205) 60S ribosomal protein L40 (CEP52) 100 2e-21
9RL40_MOUSE (P62984) 60S ribosomal protein L40 (CEP52) 100 2e-21
10RL40_HUMAN (P62987) 60S ribosomal protein L40 (CEP52) 100 2e-21
11RL40_FELCA (P63052) 60S ribosomal protein L40 (CEP52) 100 2e-21
12RL40_CHICK (P62985) 60S ribosomal protein L40 (CEP52) 100 2e-21
13RL40_CANFA (P63050) 60S ribosomal protein L40 (CEP52) 100 2e-21
14RL40_BOVIN (P63048) 60S ribosomal protein L40 (CEP52) 100 2e-21
15RL40_ACACA (P49633) 60S ribosomal protein L40 (CEP52) 100 3e-21
16RL40_DROME (P18101) 60S ribosomal protein L40 (CEP52) 98 9e-21
17RL40_SCHPO (P0C015) 60S ribosomal protein L40 (CEP52) 97 3e-20
18RL40_DICDI (P14794) 60S ribosomal protein L40 (CEP52) 96 6e-20
19RL40_YEAST (P14796) 60S ribosomal protein L40 (CEP52) 94 2e-19
20RL40_EIMBO (P46575) 60S ribosomal protein L40 (CEP52) (CEP53) 92 6e-19
21RL40_CRYNE (P40909) 60S ribosomal protein L40 (CEP52) (CEP53) 92 8e-19
22RL40_CAEEL (P49632) 60S ribosomal protein L40 (CEP52) 88 1e-17
23RL40_TETPY (P33190) 60S ribosomal protein L40 (CEP52) (CEP53) 80 2e-15
24RL40_TOBAC (P19379) 60S ribosomal protein L40 (CEP52) 80 3e-15
25RL40_TRYBB (P21899) 60S ribosomal protein L40 (CEP52) 79 7e-15
26RL40_TRYCR (P14795) 60S ribosomal protein L40 (CEP52) 78 1e-14
27RL40_LEITA (P69200) 60S ribosomal protein L40 (CEP52) 77 2e-14
28RL40_LEIMA (P69201) 60S ribosomal protein L40 (CEP52) 77 2e-14
29RL40_PYRAE (Q8ZTH0) 50S ribosomal protein L40e 36 0.042
30RL40_METKA (Q8TXM1) 50S ribosomal protein L40e 36 0.042
31RL40_AERPE (Q9YFY7) 50S ribosomal protein L40e 35 0.093
32RL40_HALMA (Q5UYU5) 50S ribosomal protein L40e 35 0.12
33RL40_METMP (P62026) 50S ribosomal protein L40e 33 0.27
34RL40_SULTO (Q976I5) 50S ribosomal protein L40e 33 0.36
35SPRL_STAAW (P67728) Protein sprT-like 32 0.79
36SPRL_STAAS (Q6G7P7) Protein sprT-like 32 0.79
37SPRL_STAAR (Q6GF11) Protein sprT-like 32 0.79
38SPRL_STAAN (P67727) Protein sprT-like 32 0.79
39SPRL_STAAM (P67726) Protein sprT-like 32 0.79
40SPRL_STAAC (Q5HED9) Protein sprT-like 32 0.79
41RL40_METJA (P54058) 50S ribosomal protein L40e 32 1.0
42RL40_SULSO (Q980V5) 50S ribosomal protein L40e 31 1.8
43RL40_METAC (Q8TJ19) 50S ribosomal protein L40e 30 3.0
44RL40_ARCFU (O28842) 50S ribosomal protein L40e 30 3.9
45PTA_BUCBP (Q89AS7) Phosphate acetyltransferase (EC 2.3.1.8) (Pho... 29 5.1
46CFTR_CARPS (Q2QLC5) Cystic fibrosis transmembrane conductance re... 29 6.7
47CFTR_PAPAN (Q9TSP5) Cystic fibrosis transmembrane conductance re... 29 6.7
48CFTR_MICMU (Q2QL83) Cystic fibrosis transmembrane conductance re... 29 6.7
49CFTR_MACNE (Q9TUQ2) Cystic fibrosis transmembrane conductance re... 29 6.7
50CFTR_MACMU (Q00553) Cystic fibrosis transmembrane conductance re... 29 6.7
51CFTR_MACFU (Q7JII7) Cystic fibrosis transmembrane conductance re... 29 6.7
52CFTR_MACFA (Q7JII8) Cystic fibrosis transmembrane conductance re... 29 6.7
53CFTR_HORSE (Q2QLA3) Cystic fibrosis transmembrane conductance re... 29 6.7
54CFTR_CALJA (Q2QLF9) Cystic fibrosis transmembrane conductance re... 29 6.7
55CFTR_PONPY (Q2IBE4) Cystic fibrosis transmembrane conductance re... 29 6.7
56CFTR_PANTR (Q2QLE5) Cystic fibrosis transmembrane conductance re... 29 6.7
57CFTR_HUMAN (P13569) Cystic fibrosis transmembrane conductance re... 29 6.7
58CFTR_CALMO (Q2QLB4) Cystic fibrosis transmembrane conductance re... 29 6.7 
>RL40_ORYSA (P35296) 60S ribosomal protein L40 (CEP52)|
          Length = 53

 Score =  114 bits (284), Expect = 2e-25
 Identities = 52/53 (98%), Positives = 53/53 (100%)
 Frame = -2

Query: 460 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIKN 302
           IIEPSLQALARKYNQ+KMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIKN
Sbjct: 1   IIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIKN 53
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>RL40_NICSY (P49636) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score =  108 bits (270), Expect = 7e-24
 Identities = 49/52 (94%), Positives = 51/52 (98%)
 Frame = -2

Query: 460 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 305
           IIEPSL ALARKYNQ+KMICRKCYARLHPRAVNCR+KKCGHSNQLRPKKKIK
Sbjct: 1   IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRRKKCGHSNQLRPKKKIK 52
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>RL40_BRARA (P51423) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score =  108 bits (270), Expect = 7e-24
 Identities = 50/52 (96%), Positives = 50/52 (96%)
 Frame = -2

Query: 460 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 305
           IIEPSL ALARKYNQ KMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK
Sbjct: 1   IIEPSLMALARKYNQAKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 52
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>RL40_ARATH (P19232) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score =  107 bits (268), Expect = 1e-23
 Identities = 49/52 (94%), Positives = 50/52 (96%)
 Frame = -2

Query: 460 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 305
           IIEPSL  LARKYNQ+KMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK
Sbjct: 1   IIEPSLMMLARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 52
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>RL40_CHLRE (P14695) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score =  106 bits (265), Expect = 3e-23
 Identities = 48/52 (92%), Positives = 50/52 (96%)
 Frame = -2

Query: 460 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 305
           IIEPSLQALARKYNQEKMICRKCYARLHPRA NCRKK CGH+NQLRPKKK+K
Sbjct: 1   IIEPSLQALARKYNQEKMICRKCYARLHPRAKNCRKKSCGHTNQLRPKKKLK 52
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>RL40_RAT (P62986) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score =  100 bits (248), Expect = 2e-21
 Identities = 44/52 (84%), Positives = 49/52 (94%)
 Frame = -2

Query: 460 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 305
           IIEPSL+ LA+KYN +KMICRKCYARLHPRAVNCRKKKCGH+N LRPKKK+K
Sbjct: 1   IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK 52
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>RL40_PIG (P63053) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score =  100 bits (248), Expect = 2e-21
 Identities = 44/52 (84%), Positives = 49/52 (94%)
 Frame = -2

Query: 460 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 305
           IIEPSL+ LA+KYN +KMICRKCYARLHPRAVNCRKKKCGH+N LRPKKK+K
Sbjct: 1   IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK 52
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>RL40_OPHHA (P68205) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score =  100 bits (248), Expect = 2e-21
 Identities = 44/52 (84%), Positives = 49/52 (94%)
 Frame = -2

Query: 460 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 305
           IIEPSL+ LA+KYN +KMICRKCYARLHPRAVNCRKKKCGH+N LRPKKK+K
Sbjct: 1   IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK 52
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>RL40_MOUSE (P62984) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score =  100 bits (248), Expect = 2e-21
 Identities = 44/52 (84%), Positives = 49/52 (94%)
 Frame = -2

Query: 460 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 305
           IIEPSL+ LA+KYN +KMICRKCYARLHPRAVNCRKKKCGH+N LRPKKK+K
Sbjct: 1   IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK 52
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>RL40_HUMAN (P62987) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score =  100 bits (248), Expect = 2e-21
 Identities = 44/52 (84%), Positives = 49/52 (94%)
 Frame = -2

Query: 460 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 305
           IIEPSL+ LA+KYN +KMICRKCYARLHPRAVNCRKKKCGH+N LRPKKK+K
Sbjct: 1   IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK 52
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>RL40_FELCA (P63052) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score =  100 bits (248), Expect = 2e-21
 Identities = 44/52 (84%), Positives = 49/52 (94%)
 Frame = -2

Query: 460 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 305
           IIEPSL+ LA+KYN +KMICRKCYARLHPRAVNCRKKKCGH+N LRPKKK+K
Sbjct: 1   IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK 52
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>RL40_CHICK (P62985) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score =  100 bits (248), Expect = 2e-21
 Identities = 44/52 (84%), Positives = 49/52 (94%)
 Frame = -2

Query: 460 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 305
           IIEPSL+ LA+KYN +KMICRKCYARLHPRAVNCRKKKCGH+N LRPKKK+K
Sbjct: 1   IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK 52
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>RL40_CANFA (P63050) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score =  100 bits (248), Expect = 2e-21
 Identities = 44/52 (84%), Positives = 49/52 (94%)
 Frame = -2

Query: 460 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 305
           IIEPSL+ LA+KYN +KMICRKCYARLHPRAVNCRKKKCGH+N LRPKKK+K
Sbjct: 1   IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK 52
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>RL40_BOVIN (P63048) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score =  100 bits (248), Expect = 2e-21
 Identities = 44/52 (84%), Positives = 49/52 (94%)
 Frame = -2

Query: 460 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 305
           IIEPSL+ LA+KYN +KMICRKCYARLHPRAVNCRKKKCGH+N LRPKKK+K
Sbjct: 1   IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK 52
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>RL40_ACACA (P49633) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score = 99.8 bits (247), Expect = 3e-21
 Identities = 43/52 (82%), Positives = 48/52 (92%)
 Frame = -2

Query: 460 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 305
           +IEPSLQ LARKYN +K++CRKCYARLHPRAVNCRKKKCGHSN  RPKKK+K
Sbjct: 1   VIEPSLQVLARKYNCDKVVCRKCYARLHPRAVNCRKKKCGHSNHWRPKKKLK 52
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>RL40_DROME (P18101) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score = 98.2 bits (243), Expect = 9e-21
 Identities = 43/52 (82%), Positives = 48/52 (92%)
 Frame = -2

Query: 460 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 305
           IIEPSL+ LA+KYN +KMICRKCYARLHPRA NCRKKKCGH+N LRPKKK+K
Sbjct: 1   IIEPSLRILAQKYNCDKMICRKCYARLHPRATNCRKKKCGHTNNLRPKKKLK 52
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>RL40_SCHPO (P0C015) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score = 96.7 bits (239), Expect = 3e-20
 Identities = 44/52 (84%), Positives = 47/52 (90%)
 Frame = -2

Query: 460 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 305
           IIEPSL+ALA KYN EK ICRKCYARL PRA NCRKKKCGH+NQLRPKKK+K
Sbjct: 1   IIEPSLKALASKYNCEKQICRKCYARLPPRATNCRKKKCGHTNQLRPKKKLK 52
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>RL40_DICDI (P14794) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score = 95.5 bits (236), Expect = 6e-20
 Identities = 43/50 (86%), Positives = 45/50 (90%)
 Frame = -2

Query: 457 IEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKI 308
           IEPSL  LARKY  +KMICRKCYARLHPRAVNCRKKKCGHSN LRPKKK+
Sbjct: 1   IEPSLVILARKYKCDKMICRKCYARLHPRAVNCRKKKCGHSNNLRPKKKL 50
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>RL40_YEAST (P14796) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score = 93.6 bits (231), Expect = 2e-19
 Identities = 41/52 (78%), Positives = 47/52 (90%)
 Frame = -2

Query: 460 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 305
           IIEPSL+ALA KYN +K +CRKCYARL PRA NCRK+KCGH+NQLRPKKK+K
Sbjct: 1   IIEPSLKALASKYNCDKSVCRKCYARLPPRATNCRKRKCGHTNQLRPKKKLK 52
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>RL40_EIMBO (P46575) 60S ribosomal protein L40 (CEP52) (CEP53)|
          Length = 53

 Score = 92.0 bits (227), Expect = 6e-19
 Identities = 43/53 (81%), Positives = 45/53 (84%)
 Frame = -2

Query: 460 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIKN 302
           IIEPSL  LA KYN EK ICRKCYARL PRA NCRKKKCGH++QLRPKKK KN
Sbjct: 1   IIEPSLALLASKYNCEKKICRKCYARLPPRATNCRKKKCGHTSQLRPKKKPKN 53
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>RL40_CRYNE (P40909) 60S ribosomal protein L40 (CEP52) (CEP53)|
          Length = 53

 Score = 91.7 bits (226), Expect = 8e-19
 Identities = 41/52 (78%), Positives = 46/52 (88%)
 Frame = -2

Query: 460 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 305
           IIEPSL+ALA KYN EK ICRKCYARL PRA NCRK+KCGHS+Q+RPKK +K
Sbjct: 1   IIEPSLKALASKYNCEKQICRKCYARLPPRATNCRKRKCGHSSQIRPKKALK 52
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>RL40_CAEEL (P49632) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score = 87.8 bits (216), Expect = 1e-17
 Identities = 40/52 (76%), Positives = 46/52 (88%)
 Frame = -2

Query: 460 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 305
           IIEPSL+ LA+KYN +K ICRKCYARL PRA NCRKKKCGHS++LR KKK+K
Sbjct: 1   IIEPSLRQLAQKYNCDKQICRKCYARLPPRASNCRKKKCGHSSELRIKKKLK 52
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>RL40_TETPY (P33190) 60S ribosomal protein L40 (CEP52) (CEP53)|
          Length = 53

 Score = 80.5 bits (197), Expect = 2e-15
 Identities = 35/51 (68%), Positives = 42/51 (82%)
 Frame = -2

Query: 457 IEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 305
           +EP++ ALA+KYN EK +CR CYARL P+A NCRK+KCGHSN LR KKK K
Sbjct: 2   MEPTIAALAKKYNCEKKVCRDCYARLPPKATNCRKRKCGHSNSLRLKKKPK 52
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>RL40_TOBAC (P19379) 60S ribosomal protein L40 (CEP52)|
          Length = 72

 Score = 79.7 bits (195), Expect = 3e-15
 Identities = 40/72 (55%), Positives = 47/72 (65%), Gaps = 20/72 (27%)
 Frame = -2

Query: 460 IIEPSLQALARKYNQEKMICRKCY--------------------ARLHPRAVNCRKKKCG 341
           IIEPSL+ALA K+N +KMICRKCY                    ARL PRA NCRK+KCG
Sbjct: 1   IIEPSLKALASKFNCDKMICRKCYVRCPRRTPQRTCRVLTWIPQARLPPRATNCRKRKCG 60

Query: 340 HSNQLRPKKKIK 305
           H+N +RPKKK+K
Sbjct: 61  HTNHVRPKKKLK 72
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>RL40_TRYBB (P21899) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score = 78.6 bits (192), Expect = 7e-15
 Identities = 33/52 (63%), Positives = 43/52 (82%)
 Frame = -2

Query: 460 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 305
           ++EP+L+ALA+KYN EK +CR+CYARL  RA NCRKK CGH + LR KKK++
Sbjct: 1   VMEPTLEALAKKYNWEKKVCRRCYARLPVRATNCRKKGCGHCSNLRMKKKLR 52
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>RL40_TRYCR (P14795) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score = 78.2 bits (191), Expect = 1e-14
 Identities = 33/52 (63%), Positives = 43/52 (82%)
 Frame = -2

Query: 460 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 305
           ++EP+L+ALA+KYN EK +CR+CYARL  RA NCRKK CGH + LR KKK++
Sbjct: 1   VMEPTLEALAKKYNWEKKVCRRCYARLPVRASNCRKKACGHCSNLRMKKKLR 52
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>RL40_LEITA (P69200) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score = 77.4 bits (189), Expect = 2e-14
 Identities = 33/52 (63%), Positives = 42/52 (80%)
 Frame = -2

Query: 460 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 305
           ++EP+L ALA+KYN EK +CR+CYARL  RA NCRKK CGH + LR KKK++
Sbjct: 1   VMEPTLVALAKKYNWEKKVCRRCYARLPVRATNCRKKACGHCSNLRMKKKLR 52
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>RL40_LEIMA (P69201) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score = 77.4 bits (189), Expect = 2e-14
 Identities = 33/52 (63%), Positives = 42/52 (80%)
 Frame = -2

Query: 460 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 305
           ++EP+L ALA+KYN EK +CR+CYARL  RA NCRKK CGH + LR KKK++
Sbjct: 1   VMEPTLVALAKKYNWEKKVCRRCYARLPVRATNCRKKACGHCSNLRMKKKLR 52
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>RL40_PYRAE (Q8ZTH0) 50S ribosomal protein L40e|
          Length = 53

 Score = 36.2 bits (82), Expect = 0.042
 Identities = 18/48 (37%), Positives = 28/48 (58%)
 Frame = -2

Query: 457 IEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKK 314
           ++P   A+  K+  +  ICR+C A+  P AV CR+ +   S  LRPK+
Sbjct: 5   LDPEKLAIVMKHRFQYKICRECGAKNPPDAVKCRRCR---SRNLRPKR 49
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>RL40_METKA (Q8TXM1) 50S ribosomal protein L40e|
          Length = 49

 Score = 36.2 bits (82), Expect = 0.042
 Identities = 22/44 (50%), Positives = 27/44 (61%)
 Frame = -2

Query: 442 QALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKK 311
           +A AR +N  K+IC KC AR  P A  CR  KCG+   LRPK +
Sbjct: 6   EAEARIFN--KLICMKCNARNPPDATKCR--KCGYKG-LRPKAR 44
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>RL40_AERPE (Q9YFY7) 50S ribosomal protein L40e|
          Length = 50

 Score = 35.0 bits (79), Expect = 0.093
 Identities = 20/50 (40%), Positives = 26/50 (52%)
 Frame = -2

Query: 460 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKK 311
           I +P L A+  K    K +CR+C A     A  CR+ +   S  LRPKKK
Sbjct: 3   ITDPELVAIFEKRVLNKKVCRRCGALNPMSATKCRRCR---SKNLRPKKK 49
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>RL40_HALMA (Q5UYU5) 50S ribosomal protein L40e|
          Length = 49

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 19/34 (55%), Positives = 21/34 (61%)
 Frame = -2

Query: 412 KMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKK 311
           K IC +C AR   RA  CR  KCG+ N LRPK K
Sbjct: 14  KQICMRCNARNPQRAQQCR--KCGYGN-LRPKAK 44
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>RL40_METMP (P62026) 50S ribosomal protein L40e|
          Length = 47

 Score = 33.5 bits (75), Expect = 0.27
 Identities = 18/34 (52%), Positives = 22/34 (64%)
 Frame = -2

Query: 412 KMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKK 311
           K IC KC +R   +A  CR  KCG++N LRPK K
Sbjct: 13  KKICMKCNSRNSWKATKCR--KCGYTN-LRPKAK 43
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>RL40_SULTO (Q976I5) 50S ribosomal protein L40e|
          Length = 56

 Score = 33.1 bits (74), Expect = 0.36
 Identities = 18/34 (52%), Positives = 20/34 (58%)
 Frame = -2

Query: 412 KMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKK 311
           K +CR C A    RA  CR  +C HS  LRPKKK
Sbjct: 19  KKVCRDCGALNSVRATKCR--RC-HSKNLRPKKK 49
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>SPRL_STAAW (P67728) Protein sprT-like|
          Length = 151

 Score = 32.0 bits (71), Expect = 0.79
 Identities = 17/50 (34%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
 Frame = -2

Query: 448 SLQALARKYNQEKMICRKCYAR-LHPRAVNCRKKKCGHSN-QLRPKKKIK 305
           S+++  ++ N E   C KC+A+ +  R V+  + +CGH N +LR K+++K
Sbjct: 103 SIESYQQRANYE-YYCTKCHAKYIRIRKVDTNRMRCGHCNGKLRMKRQLK 151
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>SPRL_STAAS (Q6G7P7) Protein sprT-like|
          Length = 151

 Score = 32.0 bits (71), Expect = 0.79
 Identities = 17/50 (34%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
 Frame = -2

Query: 448 SLQALARKYNQEKMICRKCYAR-LHPRAVNCRKKKCGHSN-QLRPKKKIK 305
           S+++  ++ N E   C KC+A+ +  R V+  + +CGH N +LR K+++K
Sbjct: 103 SIESYQQRANYE-YYCTKCHAKYIRIRKVDTNRMRCGHCNGKLRMKRQLK 151
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>SPRL_STAAR (Q6GF11) Protein sprT-like|
          Length = 151

 Score = 32.0 bits (71), Expect = 0.79
 Identities = 17/50 (34%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
 Frame = -2

Query: 448 SLQALARKYNQEKMICRKCYAR-LHPRAVNCRKKKCGHSN-QLRPKKKIK 305
           S+++  ++ N E   C KC+A+ +  R V+  + +CGH N +LR K+++K
Sbjct: 103 SIESYQQRANYE-YYCTKCHAKYIRIRKVDTNRMRCGHCNGKLRMKRQLK 151
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>SPRL_STAAN (P67727) Protein sprT-like|
          Length = 151

 Score = 32.0 bits (71), Expect = 0.79
 Identities = 17/50 (34%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
 Frame = -2

Query: 448 SLQALARKYNQEKMICRKCYAR-LHPRAVNCRKKKCGHSN-QLRPKKKIK 305
           S+++  ++ N E   C KC+A+ +  R V+  + +CGH N +LR K+++K
Sbjct: 103 SIESYQQRANYE-YYCTKCHAKYIRIRKVDTNRMRCGHCNGKLRMKRQLK 151
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>SPRL_STAAM (P67726) Protein sprT-like|
          Length = 151

 Score = 32.0 bits (71), Expect = 0.79
 Identities = 17/50 (34%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
 Frame = -2

Query: 448 SLQALARKYNQEKMICRKCYAR-LHPRAVNCRKKKCGHSN-QLRPKKKIK 305
           S+++  ++ N E   C KC+A+ +  R V+  + +CGH N +LR K+++K
Sbjct: 103 SIESYQQRANYE-YYCTKCHAKYIRIRKVDTNRMRCGHCNGKLRMKRQLK 151
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>SPRL_STAAC (Q5HED9) Protein sprT-like|
          Length = 151

 Score = 32.0 bits (71), Expect = 0.79
 Identities = 17/50 (34%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
 Frame = -2

Query: 448 SLQALARKYNQEKMICRKCYAR-LHPRAVNCRKKKCGHSN-QLRPKKKIK 305
           S+++  ++ N E   C KC+A+ +  R V+  + +CGH N +LR K+++K
Sbjct: 103 SIESYQQRANYE-YYCTKCHAKYIRIRKVDTNRMRCGHCNGKLRMKRQLK 151
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>RL40_METJA (P54058) 50S ribosomal protein L40e|
          Length = 47

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 18/34 (52%), Positives = 20/34 (58%)
 Frame = -2

Query: 412 KMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKK 311
           K IC +C AR   RA  CR  KCG+   LRPK K
Sbjct: 13  KKICMRCNARNPWRATKCR--KCGYKG-LRPKAK 43
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>RL40_SULSO (Q980V5) 50S ribosomal protein L40e|
          Length = 56

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 18/34 (52%), Positives = 20/34 (58%)
 Frame = -2

Query: 412 KMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKK 311
           K +CRKC A    RA  CR  +C HS  LR KKK
Sbjct: 19  KKVCRKCGALNPIRATKCR--RC-HSTNLRLKKK 49
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>RL40_METAC (Q8TJ19) 50S ribosomal protein L40e|
          Length = 49

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 18/34 (52%), Positives = 19/34 (55%)
 Frame = -2

Query: 412 KMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKK 311
           K IC KC AR   RA  CR  KCG+   LR K K
Sbjct: 14  KKICMKCNARNAIRATRCR--KCGYGT-LRVKSK 44
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>RL40_ARCFU (O28842) 50S ribosomal protein L40e|
          Length = 49

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 20/44 (45%), Positives = 26/44 (59%)
 Frame = -2

Query: 442 QALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKK 311
           +A AR +N +  IC +C AR   +A  CR  KCG+   LRPK K
Sbjct: 6   EAEARLFNVK--ICMRCNARNPMKARVCR--KCGYKG-LRPKSK 44
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>PTA_BUCBP (Q89AS7) Phosphate acetyltransferase (EC 2.3.1.8)|
           (Phosphotransacetylase)
          Length = 715

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 18/64 (28%), Positives = 32/64 (50%)
 Frame = -2

Query: 448 SLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIKN*ADCCFRCLDK 269
           +L+ LA+K+ +  ++   C  R+   A  C K    +   L   KKIKN A+     L+ 
Sbjct: 396 NLKHLAKKFMKNILLPEGCELRIIKAASICSKNDIAYCTLLGNPKKIKNIAESNNIVLNS 455

Query: 268 SVDI 257
           +++I
Sbjct: 456 NIEI 459
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>CFTR_CARPS (Q2QLC5) Cystic fibrosis transmembrane conductance regulator (CFTR)|
           (cAMP-dependent chloride channel) (ATP-binding cassette
           transporter sub-family C member 7)
          Length = 1482

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
 Frame = -1

Query: 161 VCLLLV---MFMVTCMIVHPTRSDFGLLLLCHHNVSKFVGLFSEIQNSFAEF 15
           VC L+      +VT  + H  ++D   +L+ H   S F G FSE+QN   +F
Sbjct: 591 VCKLMANKTRILVTSKMEHLKKAD--KILILHEGSSYFYGTFSELQNLRPDF 640
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>CFTR_PAPAN (Q9TSP5) Cystic fibrosis transmembrane conductance regulator (CFTR)|
           (cAMP-dependent chloride channel) (ATP-binding cassette
           transporter sub-family C member 7)
          Length = 1481

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
 Frame = -1

Query: 161 VCLLLV---MFMVTCMIVHPTRSDFGLLLLCHHNVSKFVGLFSEIQNSFAEF 15
           VC L+      +VT  + H  ++D   +L+ H   S F G FSE+QN   +F
Sbjct: 591 VCKLMANKTRILVTSKMEHLKKAD--KILILHEGSSYFYGTFSELQNLRPDF 640
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>CFTR_MICMU (Q2QL83) Cystic fibrosis transmembrane conductance regulator (CFTR)|
           (cAMP-dependent chloride channel) (ATP-binding cassette
           transporter sub-family C member 7)
          Length = 1481

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
 Frame = -1

Query: 161 VCLLLV---MFMVTCMIVHPTRSDFGLLLLCHHNVSKFVGLFSEIQNSFAEF 15
           VC L+      +VT  + H  ++D   +L+ H   S F G FSE+QN   +F
Sbjct: 591 VCKLMANKTRILVTSKMEHLKKAD--KILILHEGSSYFYGTFSELQNLRPDF 640
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>CFTR_MACNE (Q9TUQ2) Cystic fibrosis transmembrane conductance regulator (CFTR)|
           (cAMP-dependent chloride channel) (ATP-binding cassette
           transporter sub-family C member 7)
          Length = 1481

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
 Frame = -1

Query: 161 VCLLLV---MFMVTCMIVHPTRSDFGLLLLCHHNVSKFVGLFSEIQNSFAEF 15
           VC L+      +VT  + H  ++D   +L+ H   S F G FSE+QN   +F
Sbjct: 591 VCKLMANKTRILVTSKMEHLKKAD--KILILHEGSSYFYGTFSELQNLRPDF 640
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>CFTR_MACMU (Q00553) Cystic fibrosis transmembrane conductance regulator (CFTR)|
           (cAMP-dependent chloride channel) (ATP-binding cassette
           transporter sub-family C member 7)
          Length = 1481

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
 Frame = -1

Query: 161 VCLLLV---MFMVTCMIVHPTRSDFGLLLLCHHNVSKFVGLFSEIQNSFAEF 15
           VC L+      +VT  + H  ++D   +L+ H   S F G FSE+QN   +F
Sbjct: 591 VCKLMANKTRILVTSKMEHLKKAD--KILILHEGSSYFYGTFSELQNLRPDF 640
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>CFTR_MACFU (Q7JII7) Cystic fibrosis transmembrane conductance regulator (CFTR)|
           (cAMP-dependent chloride channel) (ATP-binding cassette
           transporter sub-family C member 7)
          Length = 1481

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
 Frame = -1

Query: 161 VCLLLV---MFMVTCMIVHPTRSDFGLLLLCHHNVSKFVGLFSEIQNSFAEF 15
           VC L+      +VT  + H  ++D   +L+ H   S F G FSE+QN   +F
Sbjct: 591 VCKLMANKTRILVTSKMEHLKKAD--KILILHEGSSYFYGTFSELQNLRPDF 640
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>CFTR_MACFA (Q7JII8) Cystic fibrosis transmembrane conductance regulator (CFTR)|
           (cAMP-dependent chloride channel) (ATP-binding cassette
           transporter sub-family C member 7)
          Length = 1481

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
 Frame = -1

Query: 161 VCLLLV---MFMVTCMIVHPTRSDFGLLLLCHHNVSKFVGLFSEIQNSFAEF 15
           VC L+      +VT  + H  ++D   +L+ H   S F G FSE+QN   +F
Sbjct: 591 VCKLMANKTRILVTSKMEHLKKAD--KILILHEGSSYFYGTFSELQNLRPDF 640
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>CFTR_HORSE (Q2QLA3) Cystic fibrosis transmembrane conductance regulator (CFTR)|
           (cAMP-dependent chloride channel) (ATP-binding cassette
           transporter sub-family C member 7)
          Length = 1481

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
 Frame = -1

Query: 161 VCLLLV---MFMVTCMIVHPTRSDFGLLLLCHHNVSKFVGLFSEIQNSFAEF 15
           VC L+      +VT  + H  ++D   +L+ H   S F G FSE+QN   +F
Sbjct: 590 VCKLMANKTRILVTSKMEHLKKAD--KILILHEGSSYFYGTFSELQNLRPDF 639
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>CFTR_CALJA (Q2QLF9) Cystic fibrosis transmembrane conductance regulator (CFTR)|
           (cAMP-dependent chloride channel) (ATP-binding cassette
           transporter sub-family C member 7)
          Length = 1481

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
 Frame = -1

Query: 161 VCLLLV---MFMVTCMIVHPTRSDFGLLLLCHHNVSKFVGLFSEIQNSFAEF 15
           VC L+      +VT  + H  ++D   +L+ H   S F G FSE+QN   +F
Sbjct: 591 VCKLMANKTRILVTSKMEHLKKAD--KILILHEGSSYFYGTFSELQNLRPDF 640
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>CFTR_PONPY (Q2IBE4) Cystic fibrosis transmembrane conductance regulator (CFTR)|
           (cAMP-dependent chloride channel) (ATP-binding cassette
           transporter sub-family C member 7)
          Length = 1480

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
 Frame = -1

Query: 161 VCLLLV---MFMVTCMIVHPTRSDFGLLLLCHHNVSKFVGLFSEIQNSFAEF 15
           VC L+      +VT  + H  ++D   +L+ H   S F G FSE+QN   +F
Sbjct: 591 VCKLMANKTRILVTSKMEHLKKAD--KILILHEGSSYFYGTFSELQNLRPDF 640
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>CFTR_PANTR (Q2QLE5) Cystic fibrosis transmembrane conductance regulator (CFTR)|
           (cAMP-dependent chloride channel) (ATP-binding cassette
           transporter sub-family C member 7)
          Length = 1480

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
 Frame = -1

Query: 161 VCLLLV---MFMVTCMIVHPTRSDFGLLLLCHHNVSKFVGLFSEIQNSFAEF 15
           VC L+      +VT  + H  ++D   +L+ H   S F G FSE+QN   +F
Sbjct: 591 VCKLMANKTRILVTSKMEHLKKAD--KILILHEGSSYFYGTFSELQNLRPDF 640
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>CFTR_HUMAN (P13569) Cystic fibrosis transmembrane conductance regulator (CFTR)|
           (cAMP-dependent chloride channel) (ATP-binding cassette
           transporter sub-family C member 7)
          Length = 1480

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
 Frame = -1

Query: 161 VCLLLV---MFMVTCMIVHPTRSDFGLLLLCHHNVSKFVGLFSEIQNSFAEF 15
           VC L+      +VT  + H  ++D   +L+ H   S F G FSE+QN   +F
Sbjct: 591 VCKLMANKTRILVTSKMEHLKKAD--KILILHEGSSYFYGTFSELQNLQPDF 640
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>CFTR_CALMO (Q2QLB4) Cystic fibrosis transmembrane conductance regulator (CFTR)|
           (cAMP-dependent chloride channel) (ATP-binding cassette
           transporter sub-family C member 7)
          Length = 1480

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
 Frame = -1

Query: 161 VCLLLV---MFMVTCMIVHPTRSDFGLLLLCHHNVSKFVGLFSEIQNSFAEF 15
           VC L+      +VT  + H  ++D   +L+ H   S F G FSE+QN   +F
Sbjct: 591 VCKLMANKTRILVTSKMEHLKKAD--KILILHEGSSYFYGTFSELQNLRPDF 640


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,148,659
Number of Sequences: 219361
Number of extensions: 1008552
Number of successful extensions: 3301
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 3065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3285
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2968155324
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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