>CYBH_AZOVI (P23000) Probable Ni/Fe-hydrogenase B-type cytochrome subunit|
          Length = 240

 Score = 30.8 bits (68), Expect = 0.89
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = +1

Query: 145 NRHTNKTMYLPTQNLRWR*PWRHLYQAVRWWRWLSASPLK 264
           N H  +   +P     W   W+ L+  VRW+ +L  +P K
Sbjct: 96  NHHARELFLVPVHRKAW---WKELWHEVRWYLFLEKTPKK 132

>CYBH_AZOCH (Q43953) Probable Ni/Fe-hydrogenase B-type cytochrome subunit|
          Length = 240

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +1

Query: 145 NRHTNKTMYLPTQNLRWR*PWRHLYQAVRWWRWLSASPLK 264
           N H  +   +P     W   W+ L+  VRW+ +L   P K
Sbjct: 96  NHHARELFLVPVHRKAW---WKELWHEVRWYLFLEKVPKK 132

>YQ55_SALTI (P68665) P4 prophage-derived hypothetical protein t2655|
          Length = 106

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -2

Query: 313 GEEKGEEIAQRMVEAFLSAGKLKATATIAQL 221
           GEEKG +IA  ++E  + +G LKA  +++ L
Sbjct: 57  GEEKGRQIACALLEDLMESGPLKAAPSLSFL 87

>YQ55_BPP4 (P68666) Hypothetical protein ORF106|
          Length = 106

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -2

Query: 313 GEEKGEEIAQRMVEAFLSAGKLKATATIAQL 221
           GEEKG +IA  ++E  + +G LKA  +++ L
Sbjct: 57  GEEKGRQIACALLEDLMESGPLKAAPSLSFL 87

>CYBH_BRAJA (P21960) Probable Ni/Fe-hydrogenase B-type cytochrome subunit|
          Length = 247

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 9/38 (23%), Positives = 19/38 (50%)
 Frame = +1

Query: 145 NRHTNKTMYLPTQNLRWR*PWRHLYQAVRWWRWLSASP 258
           N H+ +  Y+P    ++   W+ +   +RW+ +L   P
Sbjct: 107 NHHSRQIFYIPVHRKQF---WKEVLHEIRWYAFLEREP 141

>OPGG2_SHEON (Q8EDL2) Glucans biosynthesis protein G 2 precursor|
          Length = 528

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 15/46 (32%), Positives = 28/46 (60%)
 Frame = -2

Query: 304 KGEEIAQRMVEAFLSAGKLKATATIAQLDRDGARVISTSSFE*EGT 167
           K ++I +  ++A +S GK+ ++  +A  + +GAR+  T  FE E T
Sbjct: 455 KPQDIEKITIDASISKGKILSSRIVAHPEINGARIFIT--FEPEST 498

>IRF1_HUMAN (P10914) Interferon regulatory factor 1 (IRF-1)|
          Length = 325

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +3

Query: 153 HKQDNVPSYSK-LEVEITLAPSLSSCAM 233
           H    VP Y + LEVE  L P+LS CA+
Sbjct: 161 HSSYTVPGYMQDLEVEQALTPALSPCAV 188


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,835,059
Number of Sequences: 219361
Number of extensions: 775707
Number of successful extensions: 2156
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2154
length of database: 80,573,946
effective HSP length: 81
effective length of database: 62,805,705
effective search space used: 1507336920
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)