ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet93f02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YMI4_YEAST (Q04521) Hypothetical protein YML084W precursor 28 8.1

>YMI4_YEAST (Q04521) Hypothetical protein YML084W precursor|
          Length = 102

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
 Frame = -1

Query: 109 LFCFV--CSLLVKSLKGLIFWNGGSSNY 32
           LFCFV  CSL+    +G+  W+  + NY
Sbjct: 3   LFCFVLFCSLVFPLARGVFAWHNPAGNY 30


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,303,013
Number of Sequences: 219361
Number of extensions: 441157
Number of successful extensions: 762
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 762
length of database: 80,573,946
effective HSP length: 63
effective length of database: 66,754,203
effective search space used: 1602100872
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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