ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet93e03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK109334.2| Oryza sativa (japonica cultivar-group) cDNA clon... 68 2e-08
2ref|XM_466744.1| Oryza sativa (japonica cultivar-group), mRNA 60 4e-06
3ref|XM_466743.1| Oryza sativa (japonica cultivar-group), mRNA 60 4e-06
4ref|XM_507509.1| PREDICTED Oryza sativa (japonica cultivar-group... 60 4e-06
5ref|XM_507508.1| PREDICTED Oryza sativa (japonica cultivar-group... 60 4e-06
6ref|XM_507507.1| PREDICTED Oryza sativa (japonica cultivar-group... 60 4e-06
7ref|XM_507506.1| PREDICTED Oryza sativa (japonica cultivar-group... 60 4e-06
8ref|XM_507505.1| PREDICTED Oryza sativa (japonica cultivar-group... 60 4e-06
9ref|XM_507504.1| PREDICTED Oryza sativa (japonica cultivar-group... 60 4e-06
10ref|XM_507503.1| PREDICTED Oryza sativa (japonica cultivar-group... 60 4e-06
11ref|XM_507502.1| PREDICTED Oryza sativa (japonica cultivar-group... 60 4e-06
12ref|XM_507501.1| PREDICTED Oryza sativa (japonica cultivar-group... 60 4e-06
13ref|XM_507500.1| PREDICTED Oryza sativa (japonica cultivar-group... 60 4e-06
14ref|XM_507499.1| PREDICTED Oryza sativa (japonica cultivar-group... 60 4e-06
15ref|XM_507498.1| PREDICTED Oryza sativa (japonica cultivar-group... 60 4e-06
16ref|XM_507497.1| PREDICTED Oryza sativa (japonica cultivar-group... 60 4e-06
17ref|XM_506867.2| PREDICTED Oryza sativa (japonica cultivar-group... 60 4e-06
18dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 60 4e-06
19dbj|AP004097.3| Oryza sativa (japonica cultivar-group) genomic D... 60 4e-06
20dbj|AK105020.2| Oryza sativa (japonica cultivar-group) cDNA clon... 60 4e-06
21dbj|AK119668.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 4e-06
22dbj|AK106124.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 4e-06
23dbj|AK106204.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 4e-06
24dbj|AK104569.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 4e-06
25dbj|AK104563.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 4e-06
26dbj|AK104662.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 4e-06
27dbj|AK104643.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 4e-06
28dbj|AK104632.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 4e-06
29dbj|AK104607.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 4e-06
30dbj|AK104455.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 4e-06
31dbj|AK104383.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 4e-06
32dbj|AK104310.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 4e-06
33dbj|AK104307.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 4e-06
34dbj|AK104284.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 4e-06
35dbj|AK103939.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 4e-06
36dbj|AK064829.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 4e-06
37dbj|AK061687.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 4e-06
38dbj|AK060972.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 4e-06
39dbj|AK059998.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 4e-06
40gb|AY107303.1| Zea mays PCO142509 mRNA sequence 52 0.001
41emb|AL009051.1|HS747L4 Human DNA sequence from clone RP4-747L4 o... 42 0.91
42ref|XM_785758.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 3.6
43gb|AY040819.1| Galleria mellonella trypsin-like protein mRNA, co... 40 3.6
44gb|AY593845.1| Foot-and-mouth disease virus SAT 1 isolate sat1bo... 40 3.6
45gb|AY110727.1| Zea mays CL18204_1 mRNA sequence 40 3.6 
>dbj|AK109334.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-B09, full
            insert sequence
          Length = 1589

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                          
Query: 231  ctcactcatgcagagtggcgtacaccacgtagctggagtagtcctt 276
            ||||||| ||||| |||||||||| |||||||||||||||||||||
Sbjct: 1354 ctcactcgtgcagggtggcgtacatcacgtagctggagtagtcctt 1309



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                         
Query: 146  tcacgtgcacaccaaacgcatacaagaatacaaagagcaaatacc 190
            ||||| ||||| |||||| | |||||||||| |||||||||||||
Sbjct: 1475 tcacgagcacaacaaacgaacacaagaatac-aagagcaaatacc 1432
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>ref|XM_466744.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1574

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 231  ctcactcatgcagagtggcgtacaccacgtagctggagtagtcctt 276
            ||||||| ||||| |||||||||  |||||||||||||||||||||
Sbjct: 1339 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagtcctt 1294



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                         
Query: 146  tcacgtgcacaccaaacgcatacaagaatacaaagagcaaatacc 190
            ||||| ||||| |||||| | |||||||||| |||||||||||||
Sbjct: 1460 tcacgagcacaacaaacgaacacaagaatac-aagagcaaatacc 1417
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>ref|XM_466743.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1371

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 231  ctcactcatgcagagtggcgtacaccacgtagctggagtagtcctt 276
            ||||||| ||||| |||||||||  |||||||||||||||||||||
Sbjct: 1136 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagtcctt 1091



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                         
Query: 146  tcacgtgcacaccaaacgcatacaagaatacaaagagcaaatacc 190
            ||||| ||||| |||||| | |||||||||| |||||||||||||
Sbjct: 1257 tcacgagcacaacaaacgaacacaagaatac-aagagcaaatacc 1214
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>ref|XM_507509.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA
          Length = 1586

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 231  ctcactcatgcagagtggcgtacaccacgtagctggagtagtcctt 276
            ||||||| ||||| |||||||||  |||||||||||||||||||||
Sbjct: 1351 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagtcctt 1306



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                         
Query: 146  tcacgtgcacaccaaacgcatacaagaatacaaagagcaaatacc 190
            ||||| ||||| |||||| | |||||||||| |||||||||||||
Sbjct: 1472 tcacgagcacaacaaacgaacacaagaatac-aagagcaaatacc 1429
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>ref|XM_507508.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA
          Length = 1631

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 231  ctcactcatgcagagtggcgtacaccacgtagctggagtagtcctt 276
            ||||||| ||||| |||||||||  |||||||||||||||||||||
Sbjct: 1352 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagtcctt 1307



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                         
Query: 146  tcacgtgcacaccaaacgcatacaagaatacaaagagcaaatacc 190
            ||||| ||||| |||||| | |||||||||| |||||||||||||
Sbjct: 1473 tcacgagcacaacaaacgaacacaagaatac-aagagcaaatacc 1430
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>ref|XM_507507.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA
          Length = 1589

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 231  ctcactcatgcagagtggcgtacaccacgtagctggagtagtcctt 276
            ||||||| ||||| |||||||||  |||||||||||||||||||||
Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagtcctt 1309



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                         
Query: 146  tcacgtgcacaccaaacgcatacaagaatacaaagagcaaatacc 190
            ||||| ||||| |||||| | |||||||||| |||||||||||||
Sbjct: 1475 tcacgagcacaacaaacgaacacaagaatac-aagagcaaatacc 1432
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>ref|XM_507506.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA
          Length = 1589

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 231  ctcactcatgcagagtggcgtacaccacgtagctggagtagtcctt 276
            ||||||| ||||| |||||||||  |||||||||||||||||||||
Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagtcctt 1309



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                         
Query: 146  tcacgtgcacaccaaacgcatacaagaatacaaagagcaaatacc 190
            ||||| ||||| |||||| | |||||||||| |||||||||||||
Sbjct: 1475 tcacgagcacaacaaacgaacacaagaatac-aagagcaaatacc 1432
to top
>ref|XM_507505.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA
          Length = 1589

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 231  ctcactcatgcagagtggcgtacaccacgtagctggagtagtcctt 276
            ||||||| ||||| |||||||||  |||||||||||||||||||||
Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagtcctt 1309



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                         
Query: 146  tcacgtgcacaccaaacgcatacaagaatacaaagagcaaatacc 190
            ||||| ||||| |||||| | |||||||||| |||||||||||||
Sbjct: 1475 tcacgagcacaacaaacgaacacaagaatac-aagagcaaatacc 1432
to top
>ref|XM_507504.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA
          Length = 1589

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 231  ctcactcatgcagagtggcgtacaccacgtagctggagtagtcctt 276
            ||||||| ||||| |||||||||  |||||||||||||||||||||
Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagtcctt 1309



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                         
Query: 146  tcacgtgcacaccaaacgcatacaagaatacaaagagcaaatacc 190
            ||||| ||||| |||||| | |||||||||| |||||||||||||
Sbjct: 1475 tcacgagcacaacaaacgaacacaagaatac-aagagcaaatacc 1432
to top
>ref|XM_507503.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA
          Length = 1589

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 231  ctcactcatgcagagtggcgtacaccacgtagctggagtagtcctt 276
            ||||||| ||||| |||||||||  |||||||||||||||||||||
Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagtcctt 1309



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                         
Query: 146  tcacgtgcacaccaaacgcatacaagaatacaaagagcaaatacc 190
            ||||| ||||| |||||| | |||||||||| |||||||||||||
Sbjct: 1475 tcacgagcacaacaaacgaacacaagaatac-aagagcaaatacc 1432
to top
>ref|XM_507502.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA
          Length = 1589

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 231  ctcactcatgcagagtggcgtacaccacgtagctggagtagtcctt 276
            ||||||| ||||| |||||||||  |||||||||||||||||||||
Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagtcctt 1309



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                         
Query: 146  tcacgtgcacaccaaacgcatacaagaatacaaagagcaaatacc 190
            ||||| ||||| |||||| | |||||||||| |||||||||||||
Sbjct: 1475 tcacgagcacaacaaacgaacacaagaatac-aagagcaaatacc 1432
to top
>ref|XM_507501.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA
          Length = 1589

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 231  ctcactcatgcagagtggcgtacaccacgtagctggagtagtcctt 276
            ||||||| ||||| |||||||||  |||||||||||||||||||||
Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagtcctt 1309



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                         
Query: 146  tcacgtgcacaccaaacgcatacaagaatacaaagagcaaatacc 190
            ||||| ||||| |||||| | |||||||||| |||||||||||||
Sbjct: 1475 tcacgagcacaacaaacgaacacaagaatac-aagagcaaatacc 1432
to top
>ref|XM_507500.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA
          Length = 1589

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 231  ctcactcatgcagagtggcgtacaccacgtagctggagtagtcctt 276
            ||||||| ||||| |||||||||  |||||||||||||||||||||
Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagtcctt 1309



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                         
Query: 146  tcacgtgcacaccaaacgcatacaagaatacaaagagcaaatacc 190
            ||||| ||||| |||||| | |||||||||| |||||||||||||
Sbjct: 1475 tcacgagcacaacaaacgaacacaagaatac-aagagcaaatacc 1432
to top
>ref|XM_507499.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA
          Length = 1589

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 231  ctcactcatgcagagtggcgtacaccacgtagctggagtagtcctt 276
            ||||||| ||||| |||||||||  |||||||||||||||||||||
Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagtcctt 1309



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                         
Query: 146  tcacgtgcacaccaaacgcatacaagaatacaaagagcaaatacc 190
            ||||| ||||| |||||| | |||||||||| |||||||||||||
Sbjct: 1475 tcacgagcacaacaaacgaacacaagaatac-aagagcaaatacc 1432
to top
>ref|XM_507498.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA
          Length = 1592

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 231  ctcactcatgcagagtggcgtacaccacgtagctggagtagtcctt 276
            ||||||| ||||| |||||||||  |||||||||||||||||||||
Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagtcctt 1309



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                         
Query: 146  tcacgtgcacaccaaacgcatacaagaatacaaagagcaaatacc 190
            ||||| ||||| |||||| | |||||||||| |||||||||||||
Sbjct: 1475 tcacgagcacaacaaacgaacacaagaatac-aagagcaaatacc 1432
to top
>ref|XM_507497.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA
          Length = 1624

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 231  ctcactcatgcagagtggcgtacaccacgtagctggagtagtcctt 276
            ||||||| ||||| |||||||||  |||||||||||||||||||||
Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagtcctt 1309



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                         
Query: 146  tcacgtgcacaccaaacgcatacaagaatacaaagagcaaatacc 190
            ||||| ||||| |||||| | |||||||||| |||||||||||||
Sbjct: 1475 tcacgagcacaacaaacgaacacaagaatac-aagagcaaatacc 1432
to top
>ref|XM_506867.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA
          Length = 1590

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 231  ctcactcatgcagagtggcgtacaccacgtagctggagtagtcctt 276
            ||||||| ||||| |||||||||  |||||||||||||||||||||
Sbjct: 1358 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagtcctt 1313



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                         
Query: 146  tcacgtgcacaccaaacgcatacaagaatacaaagagcaaatacc 190
            ||||| ||||| |||||| | |||||||||| |||||||||||||
Sbjct: 1479 tcacgagcacaacaaacgaacacaagaatac-aagagcaaatacc 1436
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                              
Query: 231      ctcactcatgcagagtggcgtacaccacgtagctggagtagtcctt 276
                ||||||| ||||| |||||||||  |||||||||||||||||||||
Sbjct: 24393555 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagtcctt 24393510



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                             
Query: 146      tcacgtgcacaccaaacgcatacaagaatacaaagagcaaatacc 190
                ||||| ||||| |||||| | |||||||||| |||||||||||||
Sbjct: 24393676 tcacgagcacaacaaacgaacacaagaatac-aagagcaaatacc 24393633
to top
>dbj|AP004097.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1792_D02
          Length = 141649

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                           
Query: 231   ctcactcatgcagagtggcgtacaccacgtagctggagtagtcctt 276
             ||||||| ||||| |||||||||  |||||||||||||||||||||
Sbjct: 21761 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagtcctt 21716



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                          
Query: 146   tcacgtgcacaccaaacgcatacaagaatacaaagagcaaatacc 190
             ||||| ||||| |||||| | |||||||||| |||||||||||||
Sbjct: 21882 tcacgagcacaacaaacgaacacaagaatac-aagagcaaatacc 21839
to top
>dbj|AK105020.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-A05, full
            insert sequence
          Length = 1329

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 231  ctcactcatgcagagtggcgtacaccacgtagctggagtagtcctt 276
            ||||||| ||||| |||||||||  |||||||||||||||||||||
Sbjct: 1094 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagtcctt 1049



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                         
Query: 146  tcacgtgcacaccaaacgcatacaagaatacaaagagcaaatacc 190
            ||||| ||||| |||||| | |||||||||| |||||||||||||
Sbjct: 1215 tcacgagcacaacaaacgaacacaagaatac-aagagcaaatacc 1172
to top
>dbj|AK119668.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-H04, full
            insert sequence
          Length = 1631

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 231  ctcactcatgcagagtggcgtacaccacgtagctggagtagtcctt 276
            ||||||| ||||| |||||||||  |||||||||||||||||||||
Sbjct: 1352 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagtcctt 1307



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                         
Query: 146  tcacgtgcacaccaaacgcatacaagaatacaaagagcaaatacc 190
            ||||| ||||| |||||| | |||||||||| |||||||||||||
Sbjct: 1473 tcacgagcacaacaaacgaacacaagaatac-aagagcaaatacc 1430
to top
>dbj|AK106124.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-F02, full
            insert sequence
          Length = 1586

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 231  ctcactcatgcagagtggcgtacaccacgtagctggagtagtcctt 276
            ||||||| ||||| |||||||||  |||||||||||||||||||||
Sbjct: 1351 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagtcctt 1306



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                         
Query: 146  tcacgtgcacaccaaacgcatacaagaatacaaagagcaaatacc 190
            ||||| ||||| |||||| | |||||||||| |||||||||||||
Sbjct: 1472 tcacgagcacaacaaacgaacacaagaatac-aagagcaaatacc 1429
to top
>dbj|AK106204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-F12, full
            insert sequence
          Length = 1589

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 231  ctcactcatgcagagtggcgtacaccacgtagctggagtagtcctt 276
            ||||||| ||||| |||||||||  |||||||||||||||||||||
Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagtcctt 1309



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                         
Query: 146  tcacgtgcacaccaaacgcatacaagaatacaaagagcaaatacc 190
            ||||| ||||| |||||| | |||||||||| |||||||||||||
Sbjct: 1475 tcacgagcacaacaaacgaacacaagaatac-aagagcaaatacc 1432
to top
>dbj|AK104569.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-G04, full
            insert sequence
          Length = 1589

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 231  ctcactcatgcagagtggcgtacaccacgtagctggagtagtcctt 276
            ||||||| ||||| |||||||||  |||||||||||||||||||||
Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagtcctt 1309



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                         
Query: 146  tcacgtgcacaccaaacgcatacaagaatacaaagagcaaatacc 190
            ||||| ||||| |||||| | |||||||||| |||||||||||||
Sbjct: 1475 tcacgagcacaacaaacgaacacaagaatac-aagagcaaatacc 1432
to top
>dbj|AK104563.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-D08, full
            insert sequence
          Length = 1589

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 231  ctcactcatgcagagtggcgtacaccacgtagctggagtagtcctt 276
            ||||||| ||||| |||||||||  |||||||||||||||||||||
Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagtcctt 1309



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                         
Query: 146  tcacgtgcacaccaaacgcatacaagaatacaaagagcaaatacc 190
            ||||| ||||| |||||| | |||||||||| |||||||||||||
Sbjct: 1475 tcacgagcacaacaaacgaacacaagaatac-aagagcaaatacc 1432
to top
>dbj|AK104662.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-E08, full
            insert sequence
          Length = 1589

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 231  ctcactcatgcagagtggcgtacaccacgtagctggagtagtcctt 276
            ||||||| ||||| |||||||||  |||||||||||||||||||||
Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagtcctt 1309



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                         
Query: 146  tcacgtgcacaccaaacgcatacaagaatacaaagagcaaatacc 190
            ||||| ||||| |||||| | |||||||||| |||||||||||||
Sbjct: 1475 tcacgagcacaacaaacgaacacaagaatac-aagagcaaatacc 1432
to top
>dbj|AK104643.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-G04, full
           insert sequence
          Length = 975

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                         
Query: 231 ctcactcatgcagagtggcgtacaccacgtagctggagtagtcctt 276
           ||||||| ||||| |||||||||  |||||||||||||||||||||
Sbjct: 740 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagtcctt 695



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                        
Query: 146 tcacgtgcacaccaaacgcatacaagaatacaaagagcaaatacc 190
           ||||| ||||| |||||| | |||||||||| |||||||||||||
Sbjct: 861 tcacgagcacaacaaacgaacacaagaatac-aagagcaaatacc 818
to top
>dbj|AK104632.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-C05, full
            insert sequence
          Length = 1624

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 231  ctcactcatgcagagtggcgtacaccacgtagctggagtagtcctt 276
            ||||||| ||||| |||||||||  |||||||||||||||||||||
Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagtcctt 1309



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                         
Query: 146  tcacgtgcacaccaaacgcatacaagaatacaaagagcaaatacc 190
            ||||| ||||| |||||| | |||||||||| |||||||||||||
Sbjct: 1475 tcacgagcacaacaaacgaacacaagaatac-aagagcaaatacc 1432
to top
>dbj|AK104607.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-B08, full
           insert sequence
          Length = 1016

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                         
Query: 231 ctcactcatgcagagtggcgtacaccacgtagctggagtagtcctt 276
           ||||||| ||||| |||||||||  |||||||||||||||||||||
Sbjct: 757 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagtcctt 712



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                        
Query: 146 tcacgtgcacaccaaacgcatacaagaatacaaagagcaaatacc 190
           ||||| ||||| |||||| | |||||||||| |||||||||||||
Sbjct: 878 tcacgagcacaacaaacgaacacaagaatac-aagagcaaatacc 835
to top
>dbj|AK104455.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-A09, full
            insert sequence
          Length = 1589

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 231  ctcactcatgcagagtggcgtacaccacgtagctggagtagtcctt 276
            ||||||| ||||| |||||||||  |||||||||||||||||||||
Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagtcctt 1309



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                         
Query: 146  tcacgtgcacaccaaacgcatacaagaatacaaagagcaaatacc 190
            ||||| ||||| |||||| | |||||||||| |||||||||||||
Sbjct: 1475 tcacgagcacaacaaacgaacacaagaatac-aagagcaaatacc 1432
to top
>dbj|AK104383.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-C11, full
            insert sequence
          Length = 1589

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 231  ctcactcatgcagagtggcgtacaccacgtagctggagtagtcctt 276
            ||||||| ||||| |||||||||  |||||||||||||||||||||
Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagtcctt 1309



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                         
Query: 146  tcacgtgcacaccaaacgcatacaagaatacaaagagcaaatacc 190
            ||||| ||||| |||||| | |||||||||| |||||||||||||
Sbjct: 1475 tcacgagcacaacaaacgaacacaagaatac-aagagcaaatacc 1432
to top
>dbj|AK104310.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H06, full
            insert sequence
          Length = 1589

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 231  ctcactcatgcagagtggcgtacaccacgtagctggagtagtcctt 276
            ||||||| ||||| |||||||||  |||||||||||||||||||||
Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagtcctt 1309



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                         
Query: 146  tcacgtgcacaccaaacgcatacaagaatacaaagagcaaatacc 190
            ||||| ||||| |||||| | |||||||||| |||||||||||||
Sbjct: 1475 tcacgagcacaacaaacgaacacaagaatac-aagagcaaatacc 1432
to top
>dbj|AK104307.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-E07, full
            insert sequence
          Length = 1589

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 231  ctcactcatgcagagtggcgtacaccacgtagctggagtagtcctt 276
            ||||||| ||||| |||||||||  |||||||||||||||||||||
Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagtcctt 1309



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                         
Query: 146  tcacgtgcacaccaaacgcatacaagaatacaaagagcaaatacc 190
            ||||| ||||| |||||| | |||||||||| |||||||||||||
Sbjct: 1475 tcacgagcacaacaaacgaacacaagaatac-aagagcaaatacc 1432
to top
>dbj|AK104284.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-A03, full
            insert sequence
          Length = 1574

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 231  ctcactcatgcagagtggcgtacaccacgtagctggagtagtcctt 276
            ||||||| ||||| |||||||||  |||||||||||||||||||||
Sbjct: 1339 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagtcctt 1294



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                         
Query: 146  tcacgtgcacaccaaacgcatacaagaatacaaagagcaaatacc 190
            ||||| ||||| |||||| | |||||||||| |||||||||||||
Sbjct: 1460 tcacgagcacaacaaacgaacacaagaatac-aagagcaaatacc 1417
to top
>dbj|AK103939.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G07, full
            insert sequence
          Length = 1589

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 231  ctcactcatgcagagtggcgtacaccacgtagctggagtagtcctt 276
            ||||||| ||||| |||||||||  |||||||||||||||||||||
Sbjct: 1354 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagtcctt 1309



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                         
Query: 146  tcacgtgcacaccaaacgcatacaagaatacaaagagcaaatacc 190
            ||||| ||||| |||||| | |||||||||| |||||||||||||
Sbjct: 1475 tcacgagcacaacaaacgaacacaagaatac-aagagcaaatacc 1432
to top
>dbj|AK064829.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000F09, full
            insert sequence
          Length = 1591

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 231  ctcactcatgcagagtggcgtacaccacgtagctggagtagtcctt 276
            ||||||| ||||| |||||||||  |||||||||||||||||||||
Sbjct: 1359 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagtcctt 1314



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                         
Query: 146  tcacgtgcacaccaaacgcatacaagaatacaaagagcaaatacc 190
            ||||| ||||| |||||| | |||||||||| |||||||||||||
Sbjct: 1480 tcacgagcacaacaaacgaacacaagaatac-aagagcaaatacc 1437
to top
>dbj|AK061687.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B02, full
            insert sequence
          Length = 1323

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 231  ctcactcatgcagagtggcgtacaccacgtagctggagtagtcctt 276
            ||||||| ||||| |||||||||  |||||||||||||||||||||
Sbjct: 1088 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagtcctt 1043



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                         
Query: 146  tcacgtgcacaccaaacgcatacaagaatacaaagagcaaatacc 190
            ||||| ||||| |||||| | |||||||||| |||||||||||||
Sbjct: 1209 tcacgagcacaacaaacgaacacaagaatac-aagagcaaatacc 1166
to top
>dbj|AK060972.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-D12, full
            insert sequence
          Length = 1371

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 231  ctcactcatgcagagtggcgtacaccacgtagctggagtagtcctt 276
            ||||||| ||||| |||||||||  |||||||||||||||||||||
Sbjct: 1136 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagtcctt 1091



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                         
Query: 146  tcacgtgcacaccaaacgcatacaagaatacaaagagcaaatacc 190
            ||||| ||||| |||||| | |||||||||| |||||||||||||
Sbjct: 1257 tcacgagcacaacaaacgaacacaagaatac-aagagcaaatacc 1214
to top
>dbj|AK059998.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-G05, full
           insert sequence
          Length = 1043

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                         
Query: 231 ctcactcatgcagagtggcgtacaccacgtagctggagtagtcctt 276
           ||||||| ||||| |||||||||  |||||||||||||||||||||
Sbjct: 766 ctcactcgtgcagggtggcgtacgtcacgtagctggagtagtcctt 721



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                        
Query: 146 tcacgtgcacaccaaacgcatacaagaatacaaagagcaaatacc 190
           ||||| ||||| |||||| | |||||||||| |||||||||||||
Sbjct: 887 tcacgagcacaacaaacgaacacaagaatac-aagagcaaatacc 844
to top
>gb|AY107303.1| Zea mays PCO142509 mRNA sequence
          Length = 946

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                         
Query: 231 ctcactcatgcagagtggcgtacaccacgtagctggagtagtcctt 276
           |||| ||||||||||| ||||||  ||||||||||||||| |||||
Sbjct: 699 ctcagtcatgcagagtagcgtacgtcacgtagctggagtaatcctt 654
to top
>emb|AL009051.1|HS747L4 Human DNA sequence from clone RP4-747L4 on chromosome 1q23-24
            Contains a novel gene (LOC375035), the TBX19 gene for
            T-box 19 and a CpG island, complete sequence
          Length = 106319

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 252  acaccacgtagctggagtagt 272
            |||||||||||||||||||||
Sbjct: 7484 acaccacgtagctggagtagt 7504
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>ref|XM_785758.1| PREDICTED: Strongylocentrotus purpuratus similar to THAP domain
            containing 9 (LOC585954), mRNA
          Length = 2508

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 223  gctgtcacctcactcatgca 242
            ||||||||||||||||||||
Sbjct: 2123 gctgtcacctcactcatgca 2104
to top
>gb|AY040819.1| Galleria mellonella trypsin-like protein mRNA, complete cds
          Length = 993

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 178 aagagcaaataccgacgacg 197
           ||||||||||||||||||||
Sbjct: 699 aagagcaaataccgacgacg 680
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>gb|AY593845.1| Foot-and-mouth disease virus SAT 1 isolate sat1bot iso47, complete
           genome
          Length = 8175

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 166 tacaagaatacaaagagcaa 185
           ||||||||||||||||||||
Sbjct: 570 tacaagaatacaaagagcaa 551
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>gb|AY110727.1| Zea mays CL18204_1 mRNA sequence
          Length = 1134

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 231 ctcactcatgcagagtggcgtacaccacgtagctggagtagtcc 274
           ||||||||||||| || ||||||  ||| |||||| ||||||||
Sbjct: 727 ctcactcatgcagtgtagcgtacgtcacatagctgaagtagtcc 770


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,368,879
Number of Sequences: 3902068
Number of extensions: 2368879
Number of successful extensions: 39533
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 39444
Number of HSP's gapped (non-prelim): 89
length of query: 276
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 254
effective length of database: 17,147,199,772
effective search space: 4355388742088
effective search space used: 4355388742088
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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