ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet93d12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009557.1| Triticum aestivum clone wre1n.pk0001.e1:fis, full... 618 e-174
2gb|BT009206.1| Triticum aestivum clone wle1n.pk0038.f4:fis, full... 618 e-174
3gb|AY109771.1| Zea mays CL1048_1 mRNA sequence 176 3e-41
4ref|NM_187529.1| Oryza sativa (japonica cultivar-group), predic... 141 2e-30
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 141 2e-30
6gb|AC135206.3| Oryza sativa (japonica cultivar-group) chromosome... 141 2e-30
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 141 2e-30
8dbj|AK099103.1| Oryza sativa (japonica cultivar-group) cDNA clon... 141 2e-30
9dbj|AK061795.1| Oryza sativa (japonica cultivar-group) cDNA clon... 141 2e-30
10gb|AY305852.1| Elaeis guineensis clone MLT1 S-ribonuclease bindi... 107 2e-20
11ref|XM_309073.2| Anopheles gambiae str. PEST ENSANGP00000023957 ... 50 0.005
12ref|XM_309072.2| Anopheles gambiae str. PEST ENSANGP00000019541 ... 50 0.005
13ref|XM_508810.1| PREDICTED: Pan troglodytes similar to ring fing... 46 0.077
14gb|BC000058.2| Homo sapiens ring finger protein 26, mRNA (cDNA c... 46 0.077
15gb|BC007534.1| Homo sapiens ring finger protein 26, mRNA (cDNA c... 46 0.077
16emb|CR858727.1| Pongo pygmaeus mRNA; cDNA DKFZp468E156 (from clo... 46 0.077
17emb|CR624837.1| full-length cDNA clone CS0DC016YN06 of Neuroblas... 46 0.077
18dbj|AK122642.1| Homo sapiens cDNA FLJ16070 fis, clone HSYRA1000062 46 0.077
19dbj|AK075379.1| Homo sapiens cDNA PSEC0069 fis, clone NT2RP20013... 46 0.077
20emb|CR590450.1| full-length cDNA clone CS0DF034YG01 of Fetal bra... 46 0.077
21ref|NM_032015.3| Homo sapiens ring finger protein 26 (RNF26), mRNA 46 0.077
22emb|BX647424.1|HSM807569 Homo sapiens mRNA; cDNA DKFZp686F01152 ... 46 0.077
23dbj|AP003396.1| Homo sapiens genomic DNA, chromosome 11q clone:R... 46 0.077
24dbj|AP002956.1| Homo sapiens genomic DNA, chromosome 11q clone:R... 46 0.077
25dbj|AB055622.1| Homo sapiens mRNA for RING finger protein with l... 46 0.077
26gb|AC127265.4| Mus musculus BAC clone RP24-341O20 from chromosom... 44 0.30
27gb|AC151296.4| Mus musculus BAC clone RP23-127M7 from chromosome... 44 0.30
28gb|AC155809.3| Mus musculus BAC clone RP24-249H19 from chromosom... 44 0.30
29emb|BX571700.8| Zebrafish DNA sequence from clone CH211-168K14 i... 42 1.2
30emb|BX511021.9| Zebrafish DNA sequence from clone DKEY-16P21 in ... 42 1.2
31gb|AC165346.4| Mus musculus BAC clone RP23-354N5 from chromosome... 40 4.7
32gb|AC145877.3| Pan troglodytes BAC clone RP43-20I7 from 7, compl... 40 4.7
33gb|AC132085.3| Mus musculus BAC clone RP24-550M24 from chromosom... 40 4.7
34gb|AY395687.1| Escherichia coli strain BEN2908 pathogenicity isl... 40 4.7
35gb|AC153143.4| Mus musculus BAC clone RP23-241N10 from chromosom... 40 4.7
36gb|CP000243.1| Escherichia coli UTI89, complete genome 40 4.7
37emb|CR391928.7| Zebrafish DNA sequence from clone DKEYP-21F4 in ... 40 4.7
38emb|CR381585.11| Zebrafish DNA sequence from clone DKEY-27P7 in ... 40 4.7
39gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 4.7
40gb|AC009196.14| Homo sapiens chromosome 7 clone RP11-49B7, compl... 40 4.7
41gb|AC153887.6| Mus musculus 10 BAC RP23-473N3 (Roswell Park Canc... 40 4.7
42gb|AC104840.2| Homo sapiens BAC clone RP11-10E9 from 4, complete... 40 4.7
43gb|AC016679.9| Homo sapiens BAC clone RP11-58C7 from 2, complete... 40 4.7
44dbj|AP002905.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 4.7 
>gb|BT009557.1| Triticum aestivum clone wre1n.pk0001.e1:fis, full insert mRNA
           sequence
          Length = 422

 Score =  618 bits (312), Expect = e-174
 Identities = 345/356 (96%)
 Strand = Plus / Minus

                                                                       
Query: 1   gtaatcagaagttggctgcagtaattctaccagaaatggcagtcttatcgacccagtgag 60
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 gtaatcagaagttcgctgcagtaattctaccagaaatggcagtcttatcgacccagtgag 341

                                                                       
Query: 61  actacagttgacaatacattgatgtctaagtacatcagcatctcgaaagataagatactc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 actacagttgacaatacattgatgtctaagtacatcagcatctcgaaagataagatactc 281

                                                                       
Query: 121 aagcggtacataaaattatattctacatcacatatatatccccatgccaagtatcttgga 180
           |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 280 aagcagtacataaaattatattctacatcacatatatatctccatgccaagtatcttgga 221

                                                                       
Query: 181 ggactggcacagggggcagaagctcagcttgctcttgcactctttgcacaggcaaagatg 240
            |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 220 agactggcagagggggcagaagctcagcttgctctcgcactctttgcacaggcaaagatg 161

                                                                       
Query: 241 ccggcagggcagcaagagcatgcacgcctcgcttgatttacagaccctgcaggccatcaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 160 ccggcagggcagcaagagcatgcacgcctcgcttgatttacagaccctgcaggccgtcaa 101

                                                                   
Query: 301 atccttggggtgattgttcgccttgggcatcagctgcagattgacggcgccgccgt 356
           ||||||||||||||||||| |||||||||||| |||||||||||| ||||| ||||
Sbjct: 100 atccttggggtgattgttctccttgggcatcaactgcagattgacagcgccaccgt 45
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>gb|BT009206.1| Triticum aestivum clone wle1n.pk0038.f4:fis, full insert mRNA
           sequence
          Length = 458

 Score =  618 bits (312), Expect = e-174
 Identities = 345/356 (96%)
 Strand = Plus / Minus

                                                                       
Query: 1   gtaatcagaagttggctgcagtaattctaccagaaatggcagtcttatcgacccagtgag 60
           |||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 391 gtaatcagaagttctctgcagtaactctaccagaaatggcagtcttatcgacccagtgag 332

                                                                       
Query: 61  actacagttgacaatacattgatgtctaagtacatcagcatctcgaaagataagatactc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 actacagttgacaatacattgatgtctaagtacatcagcatctcgaaagataagatactc 272

                                                                       
Query: 121 aagcggtacataaaattatattctacatcacatatatatccccatgccaagtatcttgga 180
           |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 271 aagcagtacataaaattatattctacatcacatatatatctccatgccaagtatcttgga 212

                                                                       
Query: 181 ggactggcacagggggcagaagctcagcttgctcttgcactctttgcacaggcaaagatg 240
           ||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 211 ggactggcagaggggacagaagctcagcttgctctcgcactctttgcacaggcaaagatg 152

                                                                       
Query: 241 ccggcagggcagcaagagcatgcacgcctcgcttgatttacagaccctgcaggccatcaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 151 ccggcagggcagcaagagcatgcacgcctcgcttgatttacagaccctgcaggccgtcaa 92

                                                                   
Query: 301 atccttggggtgattgttcgccttgggcatcagctgcagattgacggcgccgccgt 356
           ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 91  atccttggggtgattgttctccttgggcatcagctgcagattgacagcgccgccgt 36
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>gb|AY109771.1| Zea mays CL1048_1 mRNA sequence
          Length = 1368

 Score =  176 bits (89), Expect = 3e-41
 Identities = 137/153 (89%)
 Strand = Plus / Minus

                                                                        
Query: 154  atatatccccatgccaagtatcttggaggactggcacagggggcagaagctcagcttgct 213
            ||||||| |||||||||||||||||||||||||||||| | |||||| ||||||||||||
Sbjct: 1028 atatatctccatgccaagtatcttggaggactggcacatgtggcagatgctcagcttgct 969

                                                                        
Query: 214  cttgcactctttgcacaggcaaagatgccggcagggcagcaagagcatgcacgcctcgct 273
            || |||||| ||||| || ||||||||||| || ||||||||||||||| | ||||| ||
Sbjct: 968  ctcgcactccttgcatagacaaagatgccgacacggcagcaagagcatggatgcctcact 909

                                             
Query: 274  tgatttacagaccctgcaggccatcaaatcctt 306
            |||||||||||||||||| ||| | ||||||||
Sbjct: 908  tgatttacagaccctgcaagccgttaaatcctt 876
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>ref|NM_187529.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1029

 Score =  141 bits (71), Expect = 2e-30
 Identities = 167/199 (83%)
 Strand = Plus / Minus

                                                                        
Query: 150  acatatatatccccatgccaagtatcttggaggactggcacagggggcagaagctcagct 209
            ||||||||||| ||||||||||||| || || |||||||| || ||||||||||||||||
Sbjct: 1027 acatatatatctccatgccaagtattttcgaagactggcatagcgggcagaagctcagct 968

                                                                        
Query: 210  tgctcttgcactctttgcacaggcaaagatgccggcagggcagcaagagcatgcacgcct 269
            |||| | |||||| ||||| |||||||||||||| || |||| ||| |||||||| ||||
Sbjct: 967  tgctttcgcactccttgcaaaggcaaagatgccgacaaggcaacaatagcatgcaagcct 908

                                                                        
Query: 270  cgcttgatttacagaccctgcaggccatcaaatccttggggtgattgttcgccttgggca 329
            ||||||| || ||||| || || ||  ||||||| |||| |||  ||||| |||| ||||
Sbjct: 907  cgcttgacttgcagactctacatgcggtcaaatctttggagtgtctgttctccttcggca 848

                               
Query: 330  tcagctgcagattgacggc 348
            | || |||| |||| ||||
Sbjct: 847  ttagttgcaaattggcggc 829
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  141 bits (71), Expect = 2e-30
 Identities = 167/199 (83%)
 Strand = Plus / Minus

                                                                           
Query: 150     acatatatatccccatgccaagtatcttggaggactggcacagggggcagaagctcagct 209
               ||||||||||| ||||||||||||| || || |||||||| || ||||||||||||||||
Sbjct: 8648623 acatatatatctccatgccaagtattttcgaagactggcatagcgggcagaagctcagct 8648564

                                                                           
Query: 210     tgctcttgcactctttgcacaggcaaagatgccggcagggcagcaagagcatgcacgcct 269
               |||| | |||||| ||||| |||||||||||||| || |||| ||| |||||||| ||||
Sbjct: 8648563 tgctttcgcactccttgcaaaggcaaagatgccgacaaggcaacaatagcatgcaagcct 8648504

                                                                           
Query: 270     cgcttgatttacagaccctgcaggccatcaaatccttggggtgattgttcgccttgggca 329
               ||||||| || ||||| || || ||  ||||||| |||| |||  ||||| |||| ||||
Sbjct: 8648503 cgcttgacttgcagactctacatgcggtcaaatctttggagtgtctgttctccttcggca 8648444

                                  
Query: 330     tcagctgcagattgacggc 348
               | || |||| |||| ||||
Sbjct: 8648443 ttagttgcaaattggcggc 8648425
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>gb|AC135206.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1041F02,
              complete sequence
          Length = 137327

 Score =  141 bits (71), Expect = 2e-30
 Identities = 167/199 (83%)
 Strand = Plus / Minus

                                                                          
Query: 150    acatatatatccccatgccaagtatcttggaggactggcacagggggcagaagctcagct 209
              ||||||||||| ||||||||||||| || || |||||||| || ||||||||||||||||
Sbjct: 129595 acatatatatctccatgccaagtattttcgaagactggcatagcgggcagaagctcagct 129536

                                                                          
Query: 210    tgctcttgcactctttgcacaggcaaagatgccggcagggcagcaagagcatgcacgcct 269
              |||| | |||||| ||||| |||||||||||||| || |||| ||| |||||||| ||||
Sbjct: 129535 tgctttcgcactccttgcaaaggcaaagatgccgacaaggcaacaatagcatgcaagcct 129476

                                                                          
Query: 270    cgcttgatttacagaccctgcaggccatcaaatccttggggtgattgttcgccttgggca 329
              ||||||| || ||||| || || ||  ||||||| |||| |||  ||||| |||| ||||
Sbjct: 129475 cgcttgacttgcagactctacatgcggtcaaatctttggagtgtctgttctccttcggca 129416

                                 
Query: 330    tcagctgcagattgacggc 348
              | || |||| |||| ||||
Sbjct: 129415 ttagttgcaaattggcggc 129397
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  141 bits (71), Expect = 2e-30
 Identities = 167/199 (83%)
 Strand = Plus / Minus

                                                                           
Query: 150     acatatatatccccatgccaagtatcttggaggactggcacagggggcagaagctcagct 209
               ||||||||||| ||||||||||||| || || |||||||| || ||||||||||||||||
Sbjct: 8646458 acatatatatctccatgccaagtattttcgaagactggcatagcgggcagaagctcagct 8646399

                                                                           
Query: 210     tgctcttgcactctttgcacaggcaaagatgccggcagggcagcaagagcatgcacgcct 269
               |||| | |||||| ||||| |||||||||||||| || |||| ||| |||||||| ||||
Sbjct: 8646398 tgctttcgcactccttgcaaaggcaaagatgccgacaaggcaacaatagcatgcaagcct 8646339

                                                                           
Query: 270     cgcttgatttacagaccctgcaggccatcaaatccttggggtgattgttcgccttgggca 329
               ||||||| || ||||| || || ||  ||||||| |||| |||  ||||| |||| ||||
Sbjct: 8646338 cgcttgacttgcagactctacatgcggtcaaatctttggagtgtctgttctccttcggca 8646279

                                  
Query: 330     tcagctgcagattgacggc 348
               | || |||| |||| ||||
Sbjct: 8646278 ttagttgcaaattggcggc 8646260
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>dbj|AK099103.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031B11, full
            insert sequence
          Length = 1201

 Score =  141 bits (71), Expect = 2e-30
 Identities = 167/199 (83%)
 Strand = Plus / Minus

                                                                        
Query: 150  acatatatatccccatgccaagtatcttggaggactggcacagggggcagaagctcagct 209
            ||||||||||| ||||||||||||| || || |||||||| || ||||||||||||||||
Sbjct: 1041 acatatatatctccatgccaagtattttcgaagactggcatagcgggcagaagctcagct 982

                                                                        
Query: 210  tgctcttgcactctttgcacaggcaaagatgccggcagggcagcaagagcatgcacgcct 269
            |||| | |||||| ||||| |||||||||||||| || |||| ||| |||||||| ||||
Sbjct: 981  tgctttcgcactccttgcaaaggcaaagatgccgacaaggcaacaatagcatgcaagcct 922

                                                                        
Query: 270  cgcttgatttacagaccctgcaggccatcaaatccttggggtgattgttcgccttgggca 329
            ||||||| || ||||| || || ||  ||||||| |||| |||  ||||| |||| ||||
Sbjct: 921  cgcttgacttgcagactctacatgcggtcaaatctttggagtgtctgttctccttcggca 862

                               
Query: 330  tcagctgcagattgacggc 348
            | || |||| |||| ||||
Sbjct: 861  ttagttgcaaattggcggc 843
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>dbj|AK061795.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-G03, full
            insert sequence
          Length = 1239

 Score =  141 bits (71), Expect = 2e-30
 Identities = 167/199 (83%)
 Strand = Plus / Minus

                                                                        
Query: 150  acatatatatccccatgccaagtatcttggaggactggcacagggggcagaagctcagct 209
            ||||||||||| ||||||||||||| || || |||||||| || ||||||||||||||||
Sbjct: 1125 acatatatatctccatgccaagtattttcgaagactggcatagcgggcagaagctcagct 1066

                                                                        
Query: 210  tgctcttgcactctttgcacaggcaaagatgccggcagggcagcaagagcatgcacgcct 269
            |||| | |||||| ||||| |||||||||||||| || |||| ||| |||||||| ||||
Sbjct: 1065 tgctttcgcactccttgcaaaggcaaagatgccgacaaggcaacaatagcatgcaagcct 1006

                                                                        
Query: 270  cgcttgatttacagaccctgcaggccatcaaatccttggggtgattgttcgccttgggca 329
            ||||||| || ||||| || || ||  ||||||| |||| |||  ||||| |||| ||||
Sbjct: 1005 cgcttgacttgcagactctacatgcggtcaaatctttggagtgtctgttctccttcggca 946

                               
Query: 330  tcagctgcagattgacggc 348
            | || |||| |||| ||||
Sbjct: 945  ttagttgcaaattggcggc 927
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>gb|AY305852.1| Elaeis guineensis clone MLT1 S-ribonuclease binding protein-like
           mRNA, partial cds
          Length = 291

 Score =  107 bits (54), Expect = 2e-20
 Identities = 105/122 (86%)
 Strand = Plus / Minus

                                                                       
Query: 150 acatatatatccccatgccaagtatcttggaggactggcacagggggcagaagctcagct 209
           ||||||| ||| ||||||| |  | ||| |||||||| ||||| || ||||| |||||||
Sbjct: 131 acatatagatctccatgccgataaactttgaggactgacacagcggacagaaactcagct 72

                                                                       
Query: 210 tgctcttgcactctttgcacaggcaaagatgccggcagggcagcaagagcatgcacgcct 269
           ||||||  ||||||||||| |||||||||||||||||||||||||| ||||| || ||||
Sbjct: 71  tgctctcacactctttgcagaggcaaagatgccggcagggcagcaaaagcatacatgcct 12

             
Query: 270 cg 271
           ||
Sbjct: 11  cg 10
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>ref|XM_309073.2| Anopheles gambiae str. PEST ENSANGP00000023957
           (ENSANGG00000017052), partial mRNA
          Length = 1044

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 224 ttgcacaggcaaagatgccggcagggcag 252
           ||||||||||| |||||||||||||||||
Sbjct: 950 ttgcacaggcacagatgccggcagggcag 922
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>ref|XM_309072.2| Anopheles gambiae str. PEST ENSANGP00000019541 (ENSANGG00000017052),
            partial mRNA
          Length = 1306

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 224  ttgcacaggcaaagatgccggcagggcag 252
            ||||||||||| |||||||||||||||||
Sbjct: 1209 ttgcacaggcacagatgccggcagggcag 1181
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>ref|XM_508810.1| PREDICTED: Pan troglodytes similar to ring finger protein 26; ring
           finger protein with leucine zipper (LOC451607), mRNA
          Length = 1050

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 226 gcacaggcaaagatgccggcagggcag 252
           ||||||||| |||||||||||||||||
Sbjct: 951 gcacaggcacagatgccggcagggcag 925
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>gb|BC000058.2| Homo sapiens ring finger protein 26, mRNA (cDNA clone MGC:2642
            IMAGE:3507662), complete cds
          Length = 2598

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 226  gcacaggcaaagatgccggcagggcag 252
            ||||||||| |||||||||||||||||
Sbjct: 1595 gcacaggcacagatgccggcagggcag 1569
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>gb|BC007534.1| Homo sapiens ring finger protein 26, mRNA (cDNA clone MGC:15384
            IMAGE:3028875), complete cds
          Length = 2616

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 226  gcacaggcaaagatgccggcagggcag 252
            ||||||||| |||||||||||||||||
Sbjct: 1566 gcacaggcacagatgccggcagggcag 1540
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>emb|CR858727.1| Pongo pygmaeus mRNA; cDNA DKFZp468E156 (from clone DKFZp468E156)
          Length = 2804

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 226  gcacaggcaaagatgccggcagggcag 252
            ||||||||| |||||||||||||||||
Sbjct: 1799 gcacaggcacagatgccggcagggcag 1773
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>emb|CR624837.1| full-length cDNA clone CS0DC016YN06 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 1742

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 226 gcacaggcaaagatgccggcagggcag 252
           ||||||||| |||||||||||||||||
Sbjct: 789 gcacaggcacagatgccggcagggcag 763
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>dbj|AK122642.1| Homo sapiens cDNA FLJ16070 fis, clone HSYRA1000062
          Length = 2787

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 226  gcacaggcaaagatgccggcagggcag 252
            ||||||||| |||||||||||||||||
Sbjct: 1799 gcacaggcacagatgccggcagggcag 1773
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>dbj|AK075379.1| Homo sapiens cDNA PSEC0069 fis, clone NT2RP2001341, highly similar to
            RING finger protein 26
          Length = 2568

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 226  gcacaggcaaagatgccggcagggcag 252
            ||||||||| |||||||||||||||||
Sbjct: 1584 gcacaggcacagatgccggcagggcag 1558
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>emb|CR590450.1| full-length cDNA clone CS0DF034YG01 of Fetal brain of Homo sapiens
           (human)
          Length = 1939

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 226 gcacaggcaaagatgccggcagggcag 252
           ||||||||| |||||||||||||||||
Sbjct: 992 gcacaggcacagatgccggcagggcag 966
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>ref|NM_032015.3| Homo sapiens ring finger protein 26 (RNF26), mRNA
          Length = 2803

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 226  gcacaggcaaagatgccggcagggcag 252
            ||||||||| |||||||||||||||||
Sbjct: 1799 gcacaggcacagatgccggcagggcag 1773
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>emb|BX647424.1|HSM807569 Homo sapiens mRNA; cDNA DKFZp686F01152 (from clone DKFZp686F01152)
          Length = 2800

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 226  gcacaggcaaagatgccggcagggcag 252
            ||||||||| |||||||||||||||||
Sbjct: 1799 gcacaggcacagatgccggcagggcag 1773
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>dbj|AP003396.1| Homo sapiens genomic DNA, chromosome 11q clone:RP11-334E6, complete
            sequences
          Length = 191362

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 226  gcacaggcaaagatgccggcagggcag 252
            ||||||||| |||||||||||||||||
Sbjct: 2858 gcacaggcacagatgccggcagggcag 2832
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>dbj|AP002956.1| Homo sapiens genomic DNA, chromosome 11q clone:R1105h09, complete
              sequence
          Length = 219574

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 226    gcacaggcaaagatgccggcagggcag 252
              ||||||||| |||||||||||||||||
Sbjct: 205596 gcacaggcacagatgccggcagggcag 205570
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>dbj|AB055622.1| Homo sapiens mRNA for RING finger protein with leucine zipper RNF26,
            complete cds
          Length = 1682

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 226  gcacaggcaaagatgccggcagggcag 252
            ||||||||| |||||||||||||||||
Sbjct: 1514 gcacaggcacagatgccggcagggcag 1488
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>gb|AC127265.4| Mus musculus BAC clone RP24-341O20 from chromosome 8, complete sequence
          Length = 176580

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 68    ttgacaatacattgatgtctaa 89
             ||||||||||||||||||||||
Sbjct: 41670 ttgacaatacattgatgtctaa 41649
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>gb|AC151296.4| Mus musculus BAC clone RP23-127M7 from chromosome 8, complete sequence
          Length = 210633

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 68     ttgacaatacattgatgtctaa 89
              ||||||||||||||||||||||
Sbjct: 200852 ttgacaatacattgatgtctaa 200831
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>gb|AC155809.3| Mus musculus BAC clone RP24-249H19 from chromosome 8, complete sequence
          Length = 193277

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 68    ttgacaatacattgatgtctaa 89
             ||||||||||||||||||||||
Sbjct: 77938 ttgacaatacattgatgtctaa 77917
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>emb|BX571700.8| Zebrafish DNA sequence from clone CH211-168K14 in linkage group 9,
             complete sequence
          Length = 137898

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 69    tgacaatacattgatgtctaa 89
             |||||||||||||||||||||
Sbjct: 42876 tgacaatacattgatgtctaa 42896
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>emb|BX511021.9| Zebrafish DNA sequence from clone DKEY-16P21 in linkage group 3, complete
              sequence
          Length = 235632

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 63     tacagttgacaatacattgat 83
              |||||||||||||||||||||
Sbjct: 189779 tacagttgacaatacattgat 189799
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>gb|AC165346.4| Mus musculus BAC clone RP23-354N5 from chromosome 13, complete
            sequence
          Length = 233740

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 12   ttggctgcagtaattctacc 31
            ||||||||||||||||||||
Sbjct: 1785 ttggctgcagtaattctacc 1766
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>gb|AC145877.3| Pan troglodytes BAC clone RP43-20I7 from 7, complete sequence
          Length = 192794

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    ttggctgcagtaattctacc 31
             ||||||||||||||||||||
Sbjct: 37976 ttggctgcagtaattctacc 37995
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>gb|AC132085.3| Mus musculus BAC clone RP24-550M24 from chromosome 13, complete
             sequence
          Length = 150362

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    ttggctgcagtaattctacc 31
             ||||||||||||||||||||
Sbjct: 90411 ttggctgcagtaattctacc 90392
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>gb|AY395687.1| Escherichia coli strain BEN2908 pathogenicity island AGI-1, complete
            sequence
          Length = 29505

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 104  cgaaagataagatactcaag 123
            ||||||||||||||||||||
Sbjct: 2133 cgaaagataagatactcaag 2114
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>gb|AC153143.4| Mus musculus BAC clone RP23-241N10 from chromosome 13, complete sequence
          Length = 207860

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 12     ttggctgcagtaattctacc 31
              ||||||||||||||||||||
Sbjct: 202322 ttggctgcagtaattctacc 202303
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>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 104    cgaaagataagatactcaag 123
              ||||||||||||||||||||
Sbjct: 270290 cgaaagataagatactcaag 270309
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>emb|CR391928.7| Zebrafish DNA sequence from clone DKEYP-21F4 in linkage group 5,
             complete sequence
          Length = 72746

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 66    agttgacaatacattgatgt 85
             ||||||||||||||||||||
Sbjct: 50821 agttgacaatacattgatgt 50802
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>emb|CR381585.11| Zebrafish DNA sequence from clone DKEY-27P7 in linkage group 20 Contains
              the gene for a novel protein similar to mouse and human
              integrin beta 1 binding protein 1 (ITGB1BP1), the gene for
              a novel protein similar to vertebrate development and
              differentiation enhancing factor 2 (DDEF2) and three CpG
              islands, complete sequence
          Length = 209698

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 68     ttgacaatacattgatgtct 87
              ||||||||||||||||||||
Sbjct: 168852 ttgacaatacattgatgtct 168871
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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 229     caggcaaagatgccggcagg 248
               ||||||||||||||||||||
Sbjct: 1229602 caggcaaagatgccggcagg 1229621
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>gb|AC009196.14| Homo sapiens chromosome 7 clone RP11-49B7, complete sequence
          Length = 170763

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 12     ttggctgcagtaattctacc 31
              ||||||||||||||||||||
Sbjct: 132808 ttggctgcagtaattctacc 132789
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>gb|AC153887.6| Mus musculus 10 BAC RP23-473N3 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 165306

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 208    cttgctcttgcactctttgcacag 231
              ||||||||| ||||||||||||||
Sbjct: 127525 cttgctcttacactctttgcacag 127502
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>gb|AC104840.2| Homo sapiens BAC clone RP11-10E9 from 4, complete sequence
          Length = 159946

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    caatacattgatgtctaagt 91
             ||||||||||||||||||||
Sbjct: 72409 caatacattgatgtctaagt 72428
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>gb|AC016679.9| Homo sapiens BAC clone RP11-58C7 from 2, complete sequence
          Length = 89212

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    ttgacaatacattgatgtct 87
             ||||||||||||||||||||
Sbjct: 17008 ttgacaatacattgatgtct 17027
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>dbj|AP002905.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1672E10
          Length = 158401

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 128  acataaaattatattctaca 147
            ||||||||||||||||||||
Sbjct: 9176 acataaaattatattctaca 9157


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,295,809
Number of Sequences: 3902068
Number of extensions: 3295809
Number of successful extensions: 65218
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65074
Number of HSP's gapped (non-prelim): 144
length of query: 356
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 334
effective length of database: 17,147,199,772
effective search space: 5727164723848
effective search space used: 5727164723848
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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