ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet93d09 |
|---|---|
| Clone Library Name | barley_pub |
>UPTG_MAIZE (P80607) Alpha-1,4-glucan-protein synthase [UDP-forming] (EC| 2.4.1.112) (UDP-glucose:protein transglucosylase) (UPTG) (Amylogenin) (Golgi-associated protein se-wap41) Length = 364 Score = 60.5 bits (145), Expect = 1e-09 Identities = 26/29 (89%), Positives = 27/29 (93%) Frame = -3 Query: 382 KLGKIDPYFLKLADAMVTWIEAWDELNPS 296 KLG IDPYF+KL DAMVTWIEAWDELNPS Sbjct: 326 KLGTIDPYFVKLGDAMVTWIEAWDELNPS 354
>UPTG2_SOLTU (Q8RU27) Alpha-1,4-glucan-protein synthase [UDP-forming] 2 (EC| 2.4.1.112) (UDP-glucose:protein transglucosylase 2) (UPTG 2) Length = 366 Score = 57.8 bits (138), Expect = 6e-09 Identities = 25/29 (86%), Positives = 26/29 (89%) Frame = -3 Query: 382 KLGKIDPYFLKLADAMVTWIEAWDELNPS 296 KL IDPYF KLADAMVTWIEAWDELNP+ Sbjct: 320 KLSTIDPYFTKLADAMVTWIEAWDELNPT 348
>UPTG_PEA (O04300) Alpha-1,4-glucan-protein synthase [UDP-forming] (EC| 2.4.1.112) (UDP-glucose:protein transglucosylase) (UPTG) (Reversibly glycosylated polypeptide) Length = 364 Score = 57.0 bits (136), Expect = 1e-08 Identities = 23/27 (85%), Positives = 26/27 (96%) Frame = -3 Query: 382 KLGKIDPYFLKLADAMVTWIEAWDELN 302 KLG IDPYF+KLADAMVTW+EAWDE+N Sbjct: 319 KLGTIDPYFIKLADAMVTWVEAWDEIN 345
>UPTG1_SOLTU (Q9SC19) Alpha-1,4-glucan-protein synthase [UDP-forming] 1 (EC| 2.4.1.112) (UDP-glucose:protein transglucosylase 1) (UPTG 1) Length = 365 Score = 52.0 bits (123), Expect = 3e-07 Identities = 22/27 (81%), Positives = 23/27 (85%) Frame = -3 Query: 382 KLGKIDPYFLKLADAMVTWIEAWDELN 302 KL IDPYF KL +AMVTWIEAWDELN Sbjct: 316 KLSSIDPYFTKLGEAMVTWIEAWDELN 342
>FBIC_MYCPA (Q73WP9) FO synthase (EC 2.5.1.-)| (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase) Length = 867 Score = 29.6 bits (65), Expect = 1.8 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Frame = -2 Query: 299 ICYS*CRCCCW-ERQGSSQVASLGSQECMVTAW 204 ICY+ CR C + +R+G + SL ++E AW Sbjct: 568 ICYTGCRFCAFAQRKGDADAYSLSTEEVADRAW 600
>FBIC_MYCLE (Q9CBX6) FO synthase (EC 2.5.1.-)| (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase) Length = 863 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%) Frame = -2 Query: 299 ICYS*CRCCCW-ERQGSSQVASLGSQECMVTAW 204 ICY+ CR C + +R+G + SL +E AW Sbjct: 564 ICYTGCRFCAFAQRKGDTDAYSLSREEVAERAW 596
>FBIC_NOCFA (Q5YQD7) FO synthase (EC 2.5.1.-)| (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase) Length = 865 Score = 28.5 bits (62), Expect = 4.1 Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Frame = -2 Query: 299 ICYS*CRCCCW-ERQGSSQVASLGSQECMVTAW 204 ICY+ CR C + +R+G + +L ++E AW Sbjct: 557 ICYTGCRFCAFAQRKGDADAFTLSTEEVADRAW 589
>NOTC1_RAT (Q07008) Neurogenic locus notch homolog protein 1 precursor (Notch 1)| [Contains: Notch 1 extracellular truncation; Notch 1 intracellular domain] Length = 2531 Score = 28.1 bits (61), Expect = 5.4 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = +2 Query: 218 YTLDFPS*LLGCCLAVPSSSNGIRSSRWVQLVPGLDPG 331 +T+ P+ L G C +P NG+ S++ L PG+ PG Sbjct: 2286 FTVGAPASLNGQCEWLPRLQNGMVPSQYNPLRPGVTPG 2323
>NOTC1_MOUSE (Q01705) Neurogenic locus notch homolog protein 1 precursor (Notch 1)| (Motch A) (mT14) (p300) [Contains: Notch 1 extracellular truncation; Notch 1 intracellular domain] Length = 2531 Score = 28.1 bits (61), Expect = 5.4 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = +2 Query: 218 YTLDFPS*LLGCCLAVPSSSNGIRSSRWVQLVPGLDPG 331 +T+ P+ L G C +P NG+ S++ L PG+ PG Sbjct: 2286 FTVGAPASLNGQCEWLPRLQNGMVPSQYNPLRPGVTPG 2323
>GP171_HUMAN (O14626) Probable G-protein coupled receptor 171 (G-protein coupled| receptor H963) Length = 319 Score = 27.7 bits (60), Expect = 7.0 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = +1 Query: 19 QLQRFHCNNKRCLISQNYMINIIVLNYVNDNKSL 120 +L+ FHC CLI N ++II L +V+ ++ L Sbjct: 81 KLKIFHCQVTACLIYINMYLSIIFLAFVSIDRCL 114
>NOSZ_BRUSU (Q8FX16) Nitrous-oxide reductase precursor (EC 1.7.99.6) (N(2)OR)| (N2O reductase) Length = 639 Score = 27.7 bits (60), Expect = 7.0 Identities = 8/19 (42%), Positives = 12/19 (63%) Frame = -3 Query: 142 WWFFCSWIRICYHLHNSRQ 86 WW++CSW C+ +H Q Sbjct: 613 WWYYCSW--FCHAMHMEMQ 629
>NOSZ_BRUME (Q8YBC6) Nitrous-oxide reductase precursor (EC 1.7.99.6) (N(2)OR)| (N2O reductase) Length = 639 Score = 27.7 bits (60), Expect = 7.0 Identities = 8/19 (42%), Positives = 12/19 (63%) Frame = -3 Query: 142 WWFFCSWIRICYHLHNSRQ 86 WW++CSW C+ +H Q Sbjct: 613 WWYYCSW--FCHAMHMEMQ 629
>RPOC2_CHLRE (Q7PCJ6) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)| (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) Length = 3120 Score = 27.7 bits (60), Expect = 7.0 Identities = 17/52 (32%), Positives = 24/52 (46%) Frame = +1 Query: 7 MSDAQLQRFHCNNKRCLISQNYMINIIVLNYVNDNKSLSSYKRTTSIT*KNY 162 +S L+ + NK C + + N L Y+N +K L S R S T NY Sbjct: 40 VSSVFLKSLNKVNKTCNTNSGILYNQYSLGYINMHKQLPSLIRNKSKTIGNY 91 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,069,998 Number of Sequences: 219361 Number of extensions: 700080 Number of successful extensions: 1528 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 1504 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1523 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 1391514312 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
