ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet93c06 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:6, subclone:16 Length = 5980 Score = 272 bits (137), Expect = 6e-70 Identities = 234/264 (88%), Gaps = 8/264 (3%) Strand = Plus / Minus Query: 38 ataaatatgacacaggtgttggatatgtgtaggcggtgctagaatttacatatgcatata 97 |||||||| |||| ||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 1454 ataaatatcacactggtgttgtatatgtgtagccggtgctagaatttacatatgcat--- 1398 Query: 98 tgccgcacaacctatgctcgtacatacacagatcatagagaag-aaaattatgctctagt 156 || ||||||||||| ||||||| |||||||||||| |||| |||| |||||||| || Sbjct: 1397 -gctccacaacctatgttcgtacaaacacagatcataccgaaggaaaaatatgctctggt 1339 Query: 157 cggaaagcagagtcatggacaaaagtgaagttcacagaagaccttcatacgacataggcc 216 ||| |||||||||| ||||||||||||||||||||| ||||| |||||| ||||||| Sbjct: 1338 cgggaagcagagtcctggacaaaagtgaagttcacaaaagacaatcatac---ataggcc 1282 Query: 217 attgtttcacctcgtagtttatgccttgccggactcctcgcaacccggtggcctgaaggc 276 ||||||| | ||||||||||| |||||||| |||||||||||||||||||||||||| || Sbjct: 1281 attgttttaactcgtagtttaggccttgccagactcctcgcaacccggtggcctgaatgc 1222 Query: 277 gatgaagctgacgcactgcacctg 300 |||||||||||||||||||||||| Sbjct: 1221 gatgaagctgacgcactgcacctg 1198 Score = 153 bits (77), Expect = 4e-34 Identities = 220/264 (83%), Gaps = 9/264 (3%) Strand = Plus / Minus Query: 38 ataaatatgacacaggtgttggatatgtgtaggcggtgctagaatttacatatgcatata 97 |||||||| ||| |||||||| |||||||||| | ||||||||||||||| ||||| Sbjct: 5857 ataaatatcacataggtgttgtatatgtgtagtcagtgctagaatttacacatgcac--- 5801 Query: 98 tgccgcacaacctatgctcgtacatacacagatcatagagaa-gaaaattatgctctagt 156 || ||||||| ||| ||||||||||||| || ||| |||| ||||| |||||||| || Sbjct: 5800 -gctccacaaccaatgttcgtacatacacatattatacagaacgaaaaatatgctctggt 5742 Query: 157 cggaaagcagagtcatggacaaaagtgaagttcacagaagaccttcatacgacataggcc 216 || | |||||||| |||| |||||||||||||||| ||||||||| ||| ||||||| Sbjct: 5741 aggca-gcagagtcgtggagaaaagtgaagttcacaaaagaccttcgtac---ataggcc 5686 Query: 217 attgtttcacctcgtagtttatgccttgccggactcctcgcaacccggtggcctgaaggc 276 ||||||||| ||| |||| || ||||||||||||||||| ||| |||| | ||||||| Sbjct: 5685 attgtttcaactcatagtctaggccttgccggactcctcacaagtcggtagactgaaggt 5626 Query: 277 gatgaagctgacgcactgcacctg 300 |||||| ||||||| |||||||| Sbjct: 5625 gatgaaagtgacgcaatgcacctg 5602 Score = 93.7 bits (47), Expect = 3e-16 Identities = 109/128 (85%), Gaps = 5/128 (3%) Strand = Plus / Minus Query: 65 tgtaggcggtgctagaatttacatatgcatatatgccgcacaacctatgctcgtacatac 124 ||||| |||||||||| |||||| |||||| || ||||||||||| | |||||||| Sbjct: 4481 tgtagccggtgctagagtttacacatgcat----gctccacaacctatgtttgtacatac 4426 Query: 125 acagatcatagagaagaaaa-ttatgctctagtcggaaagcagagtcatggacaaaagtg 183 |||||||||| |||| |||| ||||||| |||||||||||||||| |||| ||||||| Sbjct: 4425 acagatcatacagaacaaaaattatgcttaggtcggaaagcagagtcgtggagaaaagtg 4366 Query: 184 aagttcac 191 |||||||| Sbjct: 4365 aagttcac 4358 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 258 aacccggtggcctgaaggcgatgaagctgacgcactgcacctg 300 |||| ||||||| ||||| ||||||||||||||||| |||||| Sbjct: 4301 aaccaggtggcccgaaggtgatgaagctgacgcactacacctg 4259
>gb|M37328.1|WHTRUBIAA T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO) gene, exons 1 and 2 Length = 2205 Score = 200 bits (101), Expect = 2e-48 Identities = 122/129 (94%) Strand = Plus / Minus Query: 172 tggacaaaagtgaagttcacagaagaccttcatacgacataggccattgtttcacctcgt 231 ||||||||||||||||||||| |||| ||||||| || |||||||||||||||| ||| | Sbjct: 1572 tggacaaaagtgaagttcacaaaagatcttcatatgagataggccattgtttcaactcat 1513 Query: 232 agtttatgccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgca 291 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1512 agtttaggccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgca 1453 Query: 292 ctgcacctg 300 ||||||||| Sbjct: 1452 ctgcacctg 1444 Score = 44.1 bits (22), Expect = 0.25 Identities = 47/54 (87%), Gaps = 1/54 (1%) Strand = Plus / Minus Query: 118 tacatacacagatcatagagaagaaaat-tatgctctagtcggaaagcagagtc 170 |||||||||| |||||| |||| |||| ||||||| |||||||||||||||| Sbjct: 1641 tacatacacaaatcatatagaacaaaaggtatgctccggtcggaaagcagagtc 1588
>emb|AJ635206.1| Triticum durum ssp. durum partial mRNA for putative rubisco small subunit (rbcS gene) Length = 518 Score = 123 bits (62), Expect = 3e-25 Identities = 62/62 (100%) Strand = Plus / Minus Query: 239 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacc 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 514 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacc 455 Query: 299 tg 300 || Sbjct: 454 tg 453
>emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 Score = 119 bits (60), Expect = 5e-24 Identities = 66/68 (97%) Strand = Plus / Minus Query: 233 gtttatgccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcac 292 |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 616 gtttatgccttgccggactcctcgcagcccggtggcttgaaggcgatgaagctgacgcac 557 Query: 293 tgcacctg 300 |||||||| Sbjct: 556 tgcacctg 549
>dbj|AB042068.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p13-1 Length = 985 Score = 115 bits (58), Expect = 8e-23 Identities = 61/62 (98%) Strand = Plus / Minus Query: 239 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacc 298 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 981 gccttgccggactcctcgcaacccggtggcctgaaggcaatgaagctgacgcactgcacc 922 Query: 299 tg 300 || Sbjct: 921 tg 920
>dbj|AB042067.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p10-1 Length = 629 Score = 115 bits (58), Expect = 8e-23 Identities = 61/62 (98%) Strand = Plus / Minus Query: 239 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacc 298 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 625 gccttgccggactcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacc 566 Query: 299 tg 300 || Sbjct: 565 tg 564
>dbj|AB042065.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase Small subunit, complete cds, clone:p6-1 Length = 638 Score = 115 bits (58), Expect = 8e-23 Identities = 61/62 (98%) Strand = Plus / Minus Query: 239 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacc 298 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 634 gccttgccggactcctcgcaacccggtggcctgaatgcgatgaagctgacgcactgcacc 575 Query: 299 tg 300 || Sbjct: 574 tg 573
>emb|X00235.1|TARUB2 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC 4.1.1.39 ribulosebisphosphate carboxylase) clones 234 and 406 Length = 743 Score = 111 bits (56), Expect = 1e-21 Identities = 65/68 (95%) Strand = Plus / Minus Query: 233 gtttatgccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcac 292 ||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 495 gtttaggccttgccggactcctcgcagcccggtggcttgaaggcgatgaagctgacgcac 436 Query: 293 tgcacctg 300 |||||||| Sbjct: 435 tgcacctg 428
>gb|K02324.1|WHTRBCC Wheat (T. aestivum) chloroplast ribulosebisphosphate carboxylase small subunit mRNA, clone pTS406, 3' end Length = 317 Score = 111 bits (56), Expect = 1e-21 Identities = 65/68 (95%) Strand = Plus / Minus Query: 233 gtttatgccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcac 292 ||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 69 gtttaggccttgccggactcctcgcagcccggtggcttgaaggcgatgaagctgacgcac 10 Query: 293 tgcacctg 300 |||||||| Sbjct: 9 tgcacctg 2
>dbj|AB042066.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p9-1 Length = 739 Score = 107 bits (54), Expect = 2e-20 Identities = 60/62 (96%) Strand = Plus / Minus Query: 239 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacc 298 |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct: 735 gccttgccggactcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacc 676 Query: 299 tg 300 || Sbjct: 675 tg 674
>dbj|AB042064.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p2-1 Length = 653 Score = 107 bits (54), Expect = 2e-20 Identities = 60/62 (96%) Strand = Plus / Minus Query: 239 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacc 298 |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct: 649 gccttgccggactcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacc 590 Query: 299 tg 300 || Sbjct: 589 tg 588
>emb|X00234.1|TARUB1 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC 4.1.1.39) (ribulosebisphosphate carboxylase, clone 512) Length = 611 Score = 103 bits (52), Expect = 3e-19 Identities = 64/68 (94%) Strand = Plus / Minus Query: 233 gtttatgccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcac 292 ||||| |||||||||||||||||||| ||||||||| ||||||| ||||||||||||||| Sbjct: 344 gtttaggccttgccggactcctcgcagcccggtggcttgaaggcaatgaagctgacgcac 285 Query: 293 tgcacctg 300 |||||||| Sbjct: 284 tgcacctg 277
>dbj|AB020943.1| Hordeum vulgare DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Hor-A Length = 605 Score = 101 bits (51), Expect = 1e-18 Identities = 51/51 (100%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgc 301 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgc 555
>dbj|AB020958.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-B2 Length = 781 Score = 99.6 bits (50), Expect = 5e-18 Identities = 50/50 (100%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 300 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 781 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 732
>dbj|AB020955.1| Triticum timopheevii subsp. armeniacum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ara-B Length = 787 Score = 99.6 bits (50), Expect = 5e-18 Identities = 50/50 (100%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 300 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 787 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 738
>dbj|AB020954.1| Triticum urartu DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ura-B Length = 787 Score = 99.6 bits (50), Expect = 5e-18 Identities = 50/50 (100%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 300 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 787 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 738
>dbj|AB020953.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Squ-B Length = 781 Score = 99.6 bits (50), Expect = 5e-18 Identities = 50/50 (100%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 300 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 781 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 732
>dbj|AB020952.1| Aegilops searsii DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sea-B Length = 728 Score = 99.6 bits (50), Expect = 5e-18 Identities = 50/50 (100%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 300 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 728 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 679
>dbj|AB020950.1| Aegilops sharonensis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sha-B Length = 792 Score = 99.6 bits (50), Expect = 5e-18 Identities = 50/50 (100%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 300 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 792 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 743
>dbj|AB020949.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-B Length = 792 Score = 99.6 bits (50), Expect = 5e-18 Identities = 50/50 (100%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 300 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 792 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 743
>dbj|AB020946.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe1-B Length = 787 Score = 99.6 bits (50), Expect = 5e-18 Identities = 50/50 (100%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 300 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 787 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 738
>dbj|AB020944.1| Agropyron intermedium DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Agr-A Length = 604 Score = 99.6 bits (50), Expect = 5e-18 Identities = 50/50 (100%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 300 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 604 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 555
>dbj|AB020939.1| Triticum timopheevii subsp. armeniacum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ara-A Length = 604 Score = 99.6 bits (50), Expect = 5e-18 Identities = 50/50 (100%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 300 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 604 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 555
>dbj|AB020936.1| Aegilops bicornis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bic-A Length = 605 Score = 99.6 bits (50), Expect = 5e-18 Identities = 50/50 (100%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 300 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 556
>dbj|AB020935.1| Aegilops sharonensis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sha-A Length = 605 Score = 99.6 bits (50), Expect = 5e-18 Identities = 50/50 (100%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 300 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 556
>dbj|AB020934.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A3 Length = 605 Score = 99.6 bits (50), Expect = 5e-18 Identities = 50/50 (100%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 300 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 556
>dbj|AB020933.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A2 Length = 605 Score = 99.6 bits (50), Expect = 5e-18 Identities = 50/50 (100%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 300 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 556
>dbj|AB020932.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A1 Length = 605 Score = 99.6 bits (50), Expect = 5e-18 Identities = 50/50 (100%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 300 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 556
>emb|X83095.1|ASRBCSSS A.squarrosa mRNA for ribulose-1,5-bisphosphate carboxylase/oxygenase, small subunit Length = 837 Score = 95.6 bits (48), Expect = 8e-17 Identities = 63/68 (92%) Strand = Plus / Minus Query: 233 gtttatgccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcac 292 ||||| |||||||||||||||||||| ||||||||| || ||||||||||||||||| || Sbjct: 576 gtttaggccttgccggactcctcgcagcccggtggcttggaggcgatgaagctgacggac 517 Query: 293 tgcacctg 300 |||||||| Sbjct: 516 tgcacctg 509
>emb|AJ131737.1|SCE131737 Secale cereale mRNA for hypothetical protein, clone 5 Length = 845 Score = 95.6 bits (48), Expect = 8e-17 Identities = 62/67 (92%) Strand = Plus / Minus Query: 234 tttatgccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcact 293 |||||||||||||||| |||||||| | |||||||||||||| |||||||||||||||| Sbjct: 596 tttatgccttgccggattcctcgcagcntggtggcctgaaggcaatgaagctgacgcact 537 Query: 294 gcacctg 300 ||||||| Sbjct: 536 gcacctg 530
>dbj|AB020959.1| Secale cereale DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sec-B Length = 789 Score = 91.7 bits (46), Expect = 1e-15 Identities = 46/46 (100%) Strand = Plus / Minus Query: 255 cgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 300 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 785 cgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 740
>dbj|AB020957.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-B1 Length = 787 Score = 91.7 bits (46), Expect = 1e-15 Identities = 49/50 (98%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 300 |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 787 tcctcgcaacccggtggcctaaaggcgatgaagctgacgcactgcacctg 738
>dbj|AB020948.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-B Length = 772 Score = 91.7 bits (46), Expect = 1e-15 Identities = 49/50 (98%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 300 ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 772 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctg 723
>dbj|AB020942.1| Secale cereale DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sec-A Length = 591 Score = 91.7 bits (46), Expect = 1e-15 Identities = 49/50 (98%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 300 |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 591 tcctcgcaacccggtggcctaaaggcgatgaagctgacgcactgcacctg 542
>dbj|AB020941.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-A Length = 605 Score = 91.7 bits (46), Expect = 1e-15 Identities = 49/50 (98%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 300 ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 605 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctg 556
>dbj|AB020940.1| Triticum turgidum subsp. dicoccoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Dic-A Length = 605 Score = 91.7 bits (46), Expect = 1e-15 Identities = 49/50 (98%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 300 ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 605 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctg 556
>dbj|AB020937.1| Aegilops searsii DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sea-A Length = 611 Score = 91.7 bits (46), Expect = 1e-15 Identities = 49/50 (98%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 300 |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 611 tcctcgcaacccggtggcctaaaggcgatgaagctgacgcactgcacctg 562
>dbj|AB020930.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A2 Length = 604 Score = 91.7 bits (46), Expect = 1e-15 Identities = 49/50 (98%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 300 ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 604 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctg 555
>dbj|AB020929.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A1 Length = 604 Score = 91.7 bits (46), Expect = 1e-15 Identities = 49/50 (98%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 300 ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 604 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctg 555
>dbj|AB020928.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe2-A Length = 604 Score = 91.7 bits (46), Expect = 1e-15 Identities = 49/50 (98%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 300 ||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 604 tcctcgcaacccggtggcctgaaggcgctgaagctgacgcactgcacctg 555
>dbj|AB020960.1| Bromus catharticus DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bro-B Length = 784 Score = 91.7 bits (46), Expect = 1e-15 Identities = 49/50 (98%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 300 |||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 784 tcctcgcaacccggtggcttgaaggcgatgaagctgacgcactgcacctg 735
>dbj|AB020951.1| Aegilops bicornis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bic-B Length = 783 Score = 89.7 bits (45), Expect = 5e-15 Identities = 45/45 (100%) Strand = Plus / Minus Query: 256 gcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 300 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 783 gcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 739
>gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 816 Score = 87.7 bits (44), Expect = 2e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 233 gtttatgccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcac 292 |||||||||||||| ||||||| ||| || |||||| |||| |||||||||||||||||| Sbjct: 550 gtttatgccttgcccgactcctggcagcctggtggcttgaaagcgatgaagctgacgcac 491 Query: 293 tgcacctg 300 |||||||| Sbjct: 490 tgcacctg 483
>gb|AF192776.1|AF192776 Avena clauda clone Cl5 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 83.8 bits (42), Expect = 3e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 300 |||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctg 448
>gb|AF192775.1|AF192775 Avena strigosa clone Str5 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 83.8 bits (42), Expect = 3e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 300 |||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctg 448
>gb|AF192774.1|AF192774 Avena strigosa clone Str3 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 83.8 bits (42), Expect = 3e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 300 |||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctg 448
>gb|AF097360.1|AF097360 Avena strigosa ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 83.8 bits (42), Expect = 3e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 300 |||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctg 448
>gb|AF096617.1|AF096617 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, partial cds Length = 504 Score = 83.8 bits (42), Expect = 3e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 300 |||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctg 448
>gb|M37477.1|WHTRUBIAB T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO) gene, complete cds Length = 779 Score = 83.8 bits (42), Expect = 3e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 239 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacc 298 ||||||||||| |||||||| || |||||||||||||| |||||||||||||| |||||| Sbjct: 581 gccttgccggattcctcgcagcctggtggcctgaaggcaatgaagctgacgcattgcacc 522 Query: 299 tg 300 || Sbjct: 521 tg 520
>dbj|AB020956.1| Triticum turgidum subsp. dicoccoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Dic-B Length = 787 Score = 83.8 bits (42), Expect = 3e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 300 |||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 787 tcctcgcaacccggtggcctataggcgatgaagctgacgcactgcacctg 738
>dbj|AB020938.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Squ-A Length = 607 Score = 83.8 bits (42), Expect = 3e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 300 ||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 607 tcctcgcaacctggtggcctaaaggcgatgaagctgacgcactgcacctg 558
>dbj|AB020931.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A3 Length = 604 Score = 83.8 bits (42), Expect = 3e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 300 ||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 604 tcctcccaacctggtggcctgaaggcgatgaagctgacgcactgcacctg 555
>dbj|AB020927.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe1-A1 Length = 604 Score = 83.8 bits (42), Expect = 3e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 300 ||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 604 tcctcgcaacctggtggcctgaaggcgatgaaactgacgcactgcacctg 555
>dbj|AB020926.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds Length = 604 Score = 83.8 bits (42), Expect = 3e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 300 ||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 604 tcctcgcaacctggtggcctgaaggcgatgaaactgacgcactgcacctg 555
>gb|AF192779.1|AF192779 Avena maroccana clone Ma4 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 77.8 bits (39), Expect = 2e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 254 tcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 300 ||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 494 tcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctg 448
>gb|AF192777.1|AF192777 Avena clauda clone Cl9 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 77.8 bits (39), Expect = 2e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcac 297 |||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcac 451
>gb|AF104249.1|AF104249 Avena vaviloviana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 77.8 bits (39), Expect = 2e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcac 297 |||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcac 451
>dbj|AB020945.1| Avena sativa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ave-A Length = 590 Score = 75.8 bits (38), Expect = 7e-11 Identities = 47/50 (94%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 300 |||||||| || |||||| ||||||||||||||||||||||||||||||| Sbjct: 590 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctg 541
>gb|AF202648.1|AF202648 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 620 Score = 73.8 bits (37), Expect = 3e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 245 ccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcac 297 ||||| |||||||| ||||||||| |||| ||||||||||||||||||||||| Sbjct: 619 ccggattcctcgcagcccggtggcttgaatgcgatgaagctgacgcactgcac 567
>gb|AF202646.1|AF202646 Avena clauda clone ClG4 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 586 Score = 73.8 bits (37), Expect = 3e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 245 ccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcac 297 ||||| |||||||| || |||||| |||||||||||||||||||||||||||| Sbjct: 585 ccggattcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcac 533
>gb|AF202645.1|AF202645 Avena clauda clone ClG2 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 600 Score = 69.9 bits (35), Expect = 4e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcac 297 |||||||| || |||||| |||||||||||||||||||||||||||| Sbjct: 593 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcac 547
>gb|AF200303.1|AF200303 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, nuclear gene encoding chloroplast protein, partial cds Length = 594 Score = 69.9 bits (35), Expect = 4e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcac 297 |||||||| || |||||| |||||||||||||||||||||||||||| Sbjct: 587 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcac 541
>gb|AF192778.1|AF192778 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 69.9 bits (35), Expect = 4e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcac 297 |||||||| ||||||||| ||||||||||||| |||||||||||||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaaactgacgcactgcac 451
>gb|AF097361.1|AF097361 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 69.9 bits (35), Expect = 4e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcac 297 |||||||| ||||||||| ||||||||||||||||||| |||||||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacacactgcac 451
>gb|AF192773.1|AF192773 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 300 |||||||| || |||||| ||||||||||||||||||| ||||||||||| Sbjct: 497 tcctcgcagcctggtggcttgaaggcgatgaagctgacacactgcacctg 448
>gb|AF202647.1|AF202647 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 593 Score = 65.9 bits (33), Expect = 7e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 245 ccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcac 297 ||||| |||||||| || |||||| |||| ||||||||||||||||||||||| Sbjct: 592 ccggattcctcgcagcctggtggcttgaatgcgatgaagctgacgcactgcac 540
>gb|AF192780.1|AF192780 Avena maroccana clone Ma7 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcac 297 |||||||| || |||||| |||| ||||||||||||||||||||||| Sbjct: 497 tcctcgcagcctggtggcttgaatgcgatgaagctgacgcactgcac 451
>gb|AF097359.1|AF097359 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcac 297 |||||||| || |||||| ||||||||||||||||||| |||||||| Sbjct: 497 tcctcgcagcctggtggcttgaaggcgatgaagctgacacactgcac 451
>gb|AF104250.1|AF104250 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 251 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcac 297 |||||||| || |||||| |||| ||||||||||||||||||||||| Sbjct: 497 tcctcgcagcctggtggcttgaatgcgatgaagctgacgcactgcac 451
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 60.0 bits (30), Expect = 4e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 244 gccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgc 301 ||||||||||||||||||||| ||| || ||||||||||||| | ||||||||||| Sbjct: 11276965 gccggactcctcgcaacccgggggcttgtaggcgatgaagctaatcaactgcacctgc 11276908 Score = 52.0 bits (26), Expect = 0.001 Identities = 47/54 (87%) Strand = Plus / Minus Query: 248 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgc 301 ||||||||||||||||||||| | | ||||||||||||| ||||||||||| Sbjct: 11320108 gactcctcgcaacccggtggcttatacgcgatgaagctgattaactgcacctgc 11320055 Score = 52.0 bits (26), Expect = 0.001 Identities = 47/54 (87%) Strand = Plus / Plus Query: 248 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgc 301 ||||||||||| ||||| ||| || ||||||||||||||| | |||||||||| Sbjct: 10079783 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgc 10079836 Score = 44.1 bits (22), Expect = 0.25 Identities = 46/54 (85%) Strand = Plus / Minus Query: 248 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgc 301 |||||||||||||| || ||| || ||||||||||||| | ||||||||||| Sbjct: 11262298 gactcctcgcaacctgggggcttgtaggcgatgaagctaatcaactgcacctgc 11262245
>dbj|AK099574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036G21, full insert sequence Length = 947 Score = 60.0 bits (30), Expect = 4e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 244 gccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgc 301 ||||||||||||||||||||| ||| || ||||||||||||| | ||||||||||| Sbjct: 587 gccggactcctcgcaacccgggggcttgtaggcgatgaagctaatcaactgcacctgc 530
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 60.0 bits (30), Expect = 4e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 244 gccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgc 301 ||||||||||||||||||||| ||| || ||||||||||||| | ||||||||||| Sbjct: 11276636 gccggactcctcgcaacccgggggcttgtaggcgatgaagctaatcaactgcacctgc 11276579 Score = 52.0 bits (26), Expect = 0.001 Identities = 47/54 (87%) Strand = Plus / Minus Query: 248 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgc 301 ||||||||||||||||||||| | | ||||||||||||| ||||||||||| Sbjct: 11319779 gactcctcgcaacccggtggcttatacgcgatgaagctgattaactgcacctgc 11319726 Score = 52.0 bits (26), Expect = 0.001 Identities = 47/54 (87%) Strand = Plus / Plus Query: 248 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgc 301 ||||||||||| ||||| ||| || ||||||||||||||| | |||||||||| Sbjct: 10079668 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgc 10079721 Score = 44.1 bits (22), Expect = 0.25 Identities = 46/54 (85%) Strand = Plus / Minus Query: 248 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgc 301 |||||||||||||| || ||| || ||||||||||||| | ||||||||||| Sbjct: 11261969 gactcctcgcaacctgggggcttgtaggcgatgaagctaatcaactgcacctgc 11261916
>emb|BX119951.3|CNS09S4U Oryza sativa chromosome 12, . BAC OJ1523_A01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127267 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 244 gccggactcctcgcaacccggtggcctgaaggcgatgaagct 285 ||||||||||||||||||||| ||| || ||||||||||||| Sbjct: 95089 gccggactcctcgcaacccgggggcttgtaggcgatgaagct 95130 Score = 52.0 bits (26), Expect = 0.001 Identities = 47/54 (87%) Strand = Plus / Plus Query: 248 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgc 301 ||||||||||||||||||||| | | ||||||||||||| ||||||||||| Sbjct: 51946 gactcctcgcaacccggtggcttatacgcgatgaagctgattaactgcacctgc 51999 Score = 44.1 bits (22), Expect = 0.25 Identities = 34/38 (89%) Strand = Plus / Plus Query: 248 gactcctcgcaacccggtggcctgaaggcgatgaagct 285 |||||||||||||| || ||| || ||||||||||||| Sbjct: 109756 gactcctcgcaacctgggggcttgtaggcgatgaagct 109793
>gb|AF474982.1| Hordeum vulgare clone BAC 011009, complete sequence Length = 77136 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 1 ccgacggaattaatagcctctttattattaggtaa 35 ||||||||| |||||||||||||||||||||||| Sbjct: 2024 ccgacggaagcaatagcctctttattattaggtaa 2058
>dbj|AK121444.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141B14, full insert sequence Length = 984 Score = 52.0 bits (26), Expect = 0.001 Identities = 47/54 (87%) Strand = Plus / Minus Query: 248 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgc 301 ||||||||||| ||||| ||| || ||||||||||||||| | |||||||||| Sbjct: 725 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgc 672
>dbj|AK119219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-F11, full insert sequence Length = 828 Score = 52.0 bits (26), Expect = 0.001 Identities = 47/54 (87%) Strand = Plus / Minus Query: 248 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgc 301 ||||||||||| ||||| ||| || ||||||||||||||| | |||||||||| Sbjct: 571 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgc 518
>dbj|AK070556.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062J10, full insert sequence Length = 2409 Score = 52.0 bits (26), Expect = 0.001 Identities = 47/54 (87%) Strand = Plus / Minus Query: 248 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgc 301 ||||||||||| ||||| ||| || ||||||||||||||| | |||||||||| Sbjct: 572 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgc 519
>dbj|AK070257.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042N11, full insert sequence Length = 845 Score = 52.0 bits (26), Expect = 0.001 Identities = 47/54 (87%) Strand = Plus / Minus Query: 248 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgc 301 ||||||||||||||||||||| | | ||||||||||||| ||||||||||| Sbjct: 579 gactcctcgcaacccggtggcttatacgcgatgaagctgattaactgcacctgc 526
>dbj|AK068266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149A10, full insert sequence Length = 1999 Score = 52.0 bits (26), Expect = 0.001 Identities = 47/54 (87%) Strand = Plus / Minus Query: 248 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgc 301 ||||||||||||||||||||| | | ||||||||||||| ||||||||||| Sbjct: 581 gactcctcgcaacccggtggcttatacgcgatgaagctgattaactgcacctgc 528
>dbj|AK061611.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F07, full insert sequence Length = 830 Score = 52.0 bits (26), Expect = 0.001 Identities = 47/54 (87%) Strand = Plus / Minus Query: 248 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgc 301 ||||||||||| ||||| ||| || ||||||||||||||| | |||||||||| Sbjct: 574 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgc 521
>emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa0056I18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145890 Score = 52.0 bits (26), Expect = 0.001 Identities = 47/54 (87%) Strand = Plus / Minus Query: 248 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgc 301 ||||||||||| ||||| ||| || ||||||||||||||| | |||||||||| Sbjct: 82838 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgc 82785
>gb|L22155.1|RICCPRBCLA Oryza sativum mitochondrial ribulose bisphosphate carboxylase/oxygenase (rbcS) mRNA, complete cds Length = 808 Score = 52.0 bits (26), Expect = 0.001 Identities = 47/54 (87%) Strand = Plus / Minus Query: 248 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgc 301 ||||||||||| ||||| ||| || ||||||||||||||| | |||||||||| Sbjct: 549 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgc 496
>dbj|D00643.1|RICRUBPC1 Oryza sativa (japonica cultivar-group) mRNA for the small subunit of ribulose-1,5-bisphosphate carboxylase, complete cds, clone pOSSS1139 Length = 830 Score = 52.0 bits (26), Expect = 0.001 Identities = 47/54 (87%) Strand = Plus / Minus Query: 248 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgc 301 ||||||||||| ||||| ||| || ||||||||||||||| | |||||||||| Sbjct: 569 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgc 516
>emb|AJ428877.1|ROB428877 Rumex obtusifolius mRNA for putative ribulose 1,5 biphosphate carboxylase small subunit percursor (rbcs gene) Length = 686 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Minus Query: 273 aggcgatgaagctgacgcactgcac 297 ||||||||||||||||||||||||| Sbjct: 574 aggcgatgaagctgacgcactgcac 550
>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence Length = 114996 Score = 48.1 bits (24), Expect = 0.016 Identities = 27/28 (96%) Strand = Plus / Plus Query: 13 atagcctctttattattaggtaaagata 40 ||||| |||||||||||||||||||||| Sbjct: 64059 atagcttctttattattaggtaaagata 64086 Score = 44.1 bits (22), Expect = 0.25 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1 ccgacggaattaatagcctctttattattaggta 34 ||||||||| ||||||| ||||||||||||||| Sbjct: 62595 ccgacggaagcaatagccgctttattattaggta 62628
>emb|Y00322.1|ZMRBCS Maize rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (EC 4.1.1.39) Length = 1648 Score = 48.1 bits (24), Expect = 0.016 Identities = 33/36 (91%) Strand = Plus / Minus Query: 260 cccggtggcctgaaggcgatgaagctgacgcactgc 295 ||||| ||| || ||||||||||||||||||||||| Sbjct: 1153 cccgggggcttgtaggcgatgaagctgacgcactgc 1118
>emb|X06535.1|ZMRUBSSU Maize mRNA for ribulose-1,5-bisphosphate carboxylase small subunit (RuBPC; EC 4.1.1.39) Length = 830 Score = 48.1 bits (24), Expect = 0.016 Identities = 33/36 (91%) Strand = Plus / Minus Query: 260 cccggtggcctgaaggcgatgaagctgacgcactgc 295 ||||| ||| || ||||||||||||||||||||||| Sbjct: 568 cccgggggcttgtaggcgatgaagctgacgcactgc 533
>gb|AY103730.1| Zea mays PCO095823 mRNA sequence Length = 1172 Score = 48.1 bits (24), Expect = 0.016 Identities = 33/36 (91%) Strand = Plus / Minus Query: 260 cccggtggcctgaaggcgatgaagctgacgcactgc 295 ||||| ||| || ||||||||||||||||||||||| Sbjct: 688 cccgggggcttgtaggcgatgaagctgacgcactgc 653
>dbj|D00170.1|MZEPCSSU Zea mays mRNA for ribulose 1,5-bisphosphate carboxylase small subunit, complete cds Length = 830 Score = 48.1 bits (24), Expect = 0.016 Identities = 33/36 (91%) Strand = Plus / Minus Query: 260 cccggtggcctgaaggcgatgaagctgacgcactgc 295 ||||| ||| || ||||||||||||||||||||||| Sbjct: 568 cccgggggcttgtaggcgatgaagctgacgcactgc 533
>gb|AC092642.2| Homo sapiens BAC clone RP11-391P1 from 2, complete sequence Length = 152251 Score = 46.1 bits (23), Expect = 0.064 Identities = 23/23 (100%) Strand = Plus / Plus Query: 78 agaatttacatatgcatatatgc 100 ||||||||||||||||||||||| Sbjct: 124176 agaatttacatatgcatatatgc 124198
>emb|Y09214.1|ZMRUBSMSU Z.mays rubisco small subunit gene Length = 1274 Score = 46.1 bits (23), Expect = 0.064 Identities = 23/23 (100%) Strand = Plus / Minus Query: 273 aggcgatgaagctgacgcactgc 295 ||||||||||||||||||||||| Sbjct: 803 aggcgatgaagctgacgcactgc 781
>gb|AY268139.1| Hordeum vulgare BAC 184G9, complete sequece Length = 120562 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 12 aatagcctctttattattaggt 33 |||||||||||||||||||||| Sbjct: 73609 aatagcctctttattattaggt 73630
>gb|AY137515.1| Hordeum vulgare subsp. vulgare hypersensitive-induced reaction protein 4 (hir4) gene, complete cds Length = 4830 Score = 44.1 bits (22), Expect = 0.25 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1 ccgacggaattaatagcctctttattattaggta 34 ||||||||| ||||||| ||||||||||||||| Sbjct: 973 ccgacggaagcaatagccactttattattaggta 1006
>gb|AY445627.1| Oryza sativa (japonica cultivar-group) ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, complete cds; chloroplast Length = 860 Score = 44.1 bits (22), Expect = 0.25 Identities = 46/54 (85%) Strand = Plus / Minus Query: 248 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgc 301 |||||||||||||| || ||| || ||||||||||||| | ||||||||||| Sbjct: 566 gactcctcgcaacctgggggcttgtaggcgatgaagctaatcaactgcacctgc 513
>gb|AE016828.2| Coxiella burnetii RSA 493, complete genome Length = 1995281 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Minus Query: 6 ggaattaatagcctctttatta 27 |||||||||||||||||||||| Sbjct: 1576848 ggaattaatagcctctttatta 1576827
>gb|AC090695.14| Homo sapiens chromosome 15, clone RP11-192M23, complete sequence Length = 173632 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Minus Query: 39 taaatatgacacaggtgttgga 60 |||||||||||||||||||||| Sbjct: 80155 taaatatgacacaggtgttgga 80134
>gb|DQ351213.1| Hordeum vulgare subsp. vulgare resistance protein (ABC1037) gene, complete cds Length = 25080 Score = 44.1 bits (22), Expect = 0.25 Identities = 34/38 (89%) Strand = Plus / Plus Query: 2 cgacggaattaatagcctctttattattaggtaaagat 39 |||||||| ||||||| ||||||||||||||| |||| Sbjct: 23727 cgacggaagcaatagccgctttattattaggtatagat 23764
>dbj|AK068555.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156H12, full insert sequence Length = 899 Score = 44.1 bits (22), Expect = 0.25 Identities = 46/54 (85%) Strand = Plus / Minus Query: 248 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgc 301 |||||||||||||| || ||| || ||||||||||||| | ||||||||||| Sbjct: 583 gactcctcgcaacctgggggcttgtaggcgatgaagctaatcaactgcacctgc 530
>dbj|AK058875.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-F10, full insert sequence Length = 418 Score = 44.1 bits (22), Expect = 0.25 Identities = 46/54 (85%) Strand = Plus / Minus Query: 248 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgc 301 |||||||||||||| || ||| || ||||||||||||| | ||||||||||| Sbjct: 61 gactcctcgcaacctgggggcttgtaggcgatgaagctaatcaactgcacctgc 8
>gb|AF052305.1|AF052305 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 835 Score = 44.1 bits (22), Expect = 0.25 Identities = 46/54 (85%) Strand = Plus / Minus Query: 248 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgc 301 ||||||||||| ||||| ||| || |||||||||| |||| | |||||||||| Sbjct: 560 gactcctcgcagcccgggggcttgtaggcgatgaaactgatgagctgcacctgc 507
>gb|AF017364.1|AF017364 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 854 Score = 44.1 bits (22), Expect = 0.25 Identities = 46/54 (85%) Strand = Plus / Minus Query: 248 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgc 301 ||||| ||||| ||||| ||| || ||||||||||||||| | |||||||||| Sbjct: 597 gactcttcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgc 544
>dbj|D00644.1|RICRUBPC2 Oryza sativa (japonica cultivar-group) mRNA for the small subunit of ribulose-1,5-bisphosphate carboxylase, complete cds, clone pOSSS2106 Length = 895 Score = 44.1 bits (22), Expect = 0.25 Identities = 46/54 (85%) Strand = Plus / Minus Query: 248 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgc 301 |||||||||||||| || ||| || ||||||||||||| | ||||||||||| Sbjct: 581 gactcctcgcaacctgggggcttgtaggcgatgaagctaatcaactgcacctgc 528
>gb|AC135567.3| Mus musculus BAC clone RP23-312I24 from chromosome 16, complete sequence Length = 208603 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 81 atttacatatgcatatatgcc 101 ||||||||||||||||||||| Sbjct: 85767 atttacatatgcatatatgcc 85747
>gb|AC133967.2| Mus musculus BAC clone RP23-14J5 from chromosome 16, complete sequence Length = 195446 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 81 atttacatatgcatatatgcc 101 ||||||||||||||||||||| Sbjct: 152904 atttacatatgcatatatgcc 152884
>gb|AY382881.1| Spirodela polyrrhiza strain P143 ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS) mRNA, partial cds; nuclear gene for chloroplast product Length = 345 Score = 42.1 bits (21), Expect = 1.00 Identities = 24/25 (96%) Strand = Plus / Minus Query: 273 aggcgatgaagctgacgcactgcac 297 ||||||||||||||| ||||||||| Sbjct: 39 aggcgatgaagctgatgcactgcac 15
>emb|V00458.1|GMRUBP Glycine max gene encoding ribulose-1,5-bisphosphate carboxylase small subunit Length = 1601 Score = 42.1 bits (21), Expect = 1.00 Identities = 24/25 (96%) Strand = Plus / Minus Query: 273 aggcgatgaagctgacgcactgcac 297 ||||||||||||||| ||||||||| Sbjct: 1285 aggcgatgaagctgatgcactgcac 1261
>gb|AF303941.1|AF303941 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit rbcS3 mRNA, complete cds Length = 772 Score = 42.1 bits (21), Expect = 1.00 Identities = 24/25 (96%) Strand = Plus / Minus Query: 273 aggcgatgaagctgacgcactgcac 297 ||||||||||||||| ||||||||| Sbjct: 551 aggcgatgaagctgatgcactgcac 527
>gb|AF303940.1|AF303940 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit rbcS2 mRNA, complete cds Length = 830 Score = 42.1 bits (21), Expect = 1.00 Identities = 24/25 (96%) Strand = Plus / Minus Query: 273 aggcgatgaagctgacgcactgcac 297 ||||||||||||||| ||||||||| Sbjct: 551 aggcgatgaagctgatgcactgcac 527
>gb|AF303939.1|AF303939 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit rbcS1 mRNA, complete cds Length = 750 Score = 42.1 bits (21), Expect = 1.00 Identities = 24/25 (96%) Strand = Plus / Minus Query: 273 aggcgatgaagctgacgcactgcac 297 ||||||||||||||| ||||||||| Sbjct: 551 aggcgatgaagctgatgcactgcac 527
>gb|U39567.1|GMU39567 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 765 Score = 42.1 bits (21), Expect = 1.00 Identities = 24/25 (96%) Strand = Plus / Minus Query: 273 aggcgatgaagctgacgcactgcac 297 ||||||||||||||| ||||||||| Sbjct: 548 aggcgatgaagctgatgcactgcac 524
>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence Length = 108608 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 ttattattaggtaaagataaa 42 ||||||||||||||||||||| Sbjct: 91880 ttattattaggtaaagataaa 91860
>emb|AL772245.7| Mouse DNA sequence from clone RP23-332K6 on chromosome 4, complete sequence Length = 70508 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 80 aatttacatatgcatatatgc 100 ||||||||||||||||||||| Sbjct: 46373 aatttacatatgcatatatgc 46393
>gb|U39857.1|GTU39857 Glycine tomentella ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit precursor (rbcS) gene, nuclear gene encoding chloroplast protein, complete cds Length = 1069 Score = 42.1 bits (21), Expect = 1.00 Identities = 24/25 (96%) Strand = Plus / Minus Query: 273 aggcgatgaagctgacgcactgcac 297 ||||||||||||||| ||||||||| Sbjct: 1048 aggcgatgaagctgatgcactgcac 1024
>gb|U39856.1|GSU39856 Glycine soja ribulose 1,5-bisphosphate carboxylase small subunit precursor (rbcS) gene, nuclear gene encoding chloroplast protein, complete cds Length = 1089 Score = 42.1 bits (21), Expect = 1.00 Identities = 24/25 (96%) Strand = Plus / Minus Query: 273 aggcgatgaagctgacgcactgcac 297 ||||||||||||||| ||||||||| Sbjct: 1068 aggcgatgaagctgatgcactgcac 1044
>emb|AL596456.15| Mouse DNA sequence from clone RP23-353K20 on chromosome 11, complete sequence Length = 228428 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 79 gaatttacatatgcatatatg 99 ||||||||||||||||||||| Sbjct: 158744 gaatttacatatgcatatatg 158764
>gb|M16889.1|SOYRUBPA Soybean ribulose 1,5-bisphosphate carboxylase small subunit (SRS4) gene, complete cds Length = 2185 Score = 42.1 bits (21), Expect = 1.00 Identities = 24/25 (96%) Strand = Plus / Minus Query: 273 aggcgatgaagctgacgcactgcac 297 ||||||||||||||| ||||||||| Sbjct: 1719 aggcgatgaagctgatgcactgcac 1695
>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome Length = 4222334 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 attattaggtaaagataaat 43 |||||||||||||||||||| Sbjct: 725422 attattaggtaaagataaat 725441
>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome Length = 4222645 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 attattaggtaaagataaat 43 |||||||||||||||||||| Sbjct: 725206 attattaggtaaagataaat 725225
>gb|AC139748.12| Medicago truncatula clone mth2-15o24, complete sequence Length = 144217 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 tcctcgcaacccggtggcct 270 |||||||||||||||||||| Sbjct: 57925 tcctcgcaacccggtggcct 57944
>emb|CR382380.5| Zebrafish DNA sequence from clone DKEY-112M3 in linkage group 14, complete sequence Length = 84200 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 atcatagagaagaaaattat 148 |||||||||||||||||||| Sbjct: 30579 atcatagagaagaaaattat 30560
>gb|AC127430.4| Homo sapiens chromosome 3 clone CTD-2563A18, complete sequence Length = 181750 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 134 agagaagaaaattatgctctagtc 157 |||||||||||||||| ||||||| Sbjct: 134558 agagaagaaaattatgttctagtc 134581
>emb|AL929220.13| Zebrafish DNA sequence from clone DKEY-65B13 in linkage group 20, complete sequence Length = 227539 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 aggtgttggatatgtgtagg 70 |||||||||||||||||||| Sbjct: 153318 aggtgttggatatgtgtagg 153299
>emb|BX465837.11| Zebrafish DNA sequence from clone DKEY-27C15 in linkage group 19, complete sequence Length = 206154 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 gagtcatggacaaaagtgaa 185 |||||||||||||||||||| Sbjct: 165557 gagtcatggacaaaagtgaa 165538
>emb|BX000366.6| Zebrafish DNA sequence from clone CH211-204I4, complete sequence Length = 169542 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 aattaatagcctctttattattag 31 ||||| |||||||||||||||||| Sbjct: 20504 aattattagcctctttattattag 20481
>gb|AF008214.1|AF008214 Musa acuminata ribulose-1,5-bisphosphate carboxylase small subunit (rbcS1) mRNA, complete cds Length = 853 Score = 40.1 bits (20), Expect = 3.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 273 aggcgatgaagctgacgcactgcacctg 300 |||||||||| |||| |||||||||||| Sbjct: 591 aggcgatgaaactgatgcactgcacctg 564
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 gcctgaaggcgatgaagctg 286 |||||||||||||||||||| Sbjct: 2694162 gcctgaaggcgatgaagctg 2694143
>emb|AL935140.6| Zebrafish DNA sequence from clone DKEYP-122E7 in linkage group 9, complete sequence Length = 83763 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 agtcatggacaaaagtgaag 186 |||||||||||||||||||| Sbjct: 18452 agtcatggacaaaagtgaag 18433 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,769,514 Number of Sequences: 3902068 Number of extensions: 2769514 Number of successful extensions: 59926 Number of sequences better than 10.0: 127 Number of HSP's better than 10.0 without gapping: 127 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 59710 Number of HSP's gapped (non-prelim): 210 length of query: 301 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 279 effective length of database: 17,147,199,772 effective search space: 4784068736388 effective search space used: 4784068736388 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
