| Clone Name | rbaet92h09 |
|---|---|
| Clone Library Name | barley_pub |
>7SBG2_SOYBN (Q8RVH5) Basic 7S globulin 2 precursor (Bg) (SBg7S) [Contains:| Basic 7S globulin 2 high-kDa subunit; Basic 7S globulin 2 low-kDa subunit] Length = 433 Score = 45.1 bits (105), Expect = 7e-05 Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 5/86 (5%) Frame = -1 Query: 412 PNVVLALD--GGGEWAMTGKNSMVDVKPGTACVAFVEMEAGDGGAPAVILGGAQMEDFVL 239 P+V L +D G W ++G++ MV +PG C+ M G V LG Q+E+ ++ Sbjct: 344 PSVDLVMDKPNGPVWRISGEDLMVQAQPGVTCLGV--MNGGMQPRAEVTLGTRQLEEKLM 401 Query: 238 DFDMEKKRLGFIRL---PHFTGCGNL 170 FD+ + R+GF H CG+L Sbjct: 402 VFDLARSRVGFSTSSLHSHGVKCGDL 427
>7SB1_SOYBN (P13917) Basic 7S globulin precursor (Bg) (SBg7S) [Contains: Basic| 7S globulin high-kDa subunit; Basic 7S globulin low-kDa subunit] Length = 427 Score = 43.9 bits (102), Expect = 1e-04 Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 2/71 (2%) Frame = -1 Query: 412 PNVVLALD--GGGEWAMTGKNSMVDVKPGTACVAFVEMEAGDGGAPAVILGGAQMEDFVL 239 P+V L +D G W ++G++ MV +PG C+ M G + LG Q+E+ ++ Sbjct: 338 PSVDLVMDKPNGPVWRISGEDLMVQAQPGVTCLGV--MNGGMQPRAEITLGARQLEENLV 395 Query: 238 DFDMEKKRLGF 206 FD+ + R+GF Sbjct: 396 VFDLARSRVGF 406
>ATG21_CANGA (Q6FRU4) Autophagy-related protein 21| Length = 453 Score = 30.4 bits (67), Expect = 1.7 Identities = 10/25 (40%), Positives = 17/25 (68%) Frame = -2 Query: 105 LFIYSVLSITPCNNNNPVHRGCILR 31 + +Y L++ P N N VH+GC+L+ Sbjct: 245 IVVYDALNLKPINYLNSVHKGCVLK 269
>ASP3_CAEEL (P55956) Aspartic protease 3 precursor (EC 3.4.23.-)| Length = 398 Score = 30.4 bits (67), Expect = 1.7 Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 4/74 (5%) Frame = -1 Query: 415 VPNVVLALDGGGEWAMTGKNSMVDVKPG----TACVAFVEMEAGDGGAPAVILGGAQMED 248 +PN+ L GG + + GK+ ++ + G T F+ M+ P ILG + Sbjct: 319 LPNITFNL-GGQNFDLQGKDYILQMSNGNGGSTCLSGFMGMDIPAPAGPLWILGDVFIGR 377 Query: 247 FVLDFDMEKKRLGF 206 F FD KR+GF Sbjct: 378 FYSVFDHGNKRVGF 391
>CATD_CLUHA (Q9DEX3) Cathepsin D precursor (EC 3.4.23.5)| Length = 396 Score = 28.9 bits (63), Expect = 4.9 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 3/66 (4%) Frame = -1 Query: 388 GGGEWAMTGKNSMVDVKPG--TACVA-FVEMEAGDGGAPAVILGGAQMEDFVLDFDMEKK 218 GG +++TG+ ++ G T C++ + +E P ILG + + FD E Sbjct: 329 GGKTYSLTGEQYVLKESQGGKTICLSGLMGLEIPPPAGPLWILGDVFIGQYYTVFDRESN 388 Query: 217 RLGFIR 200 R+GF + Sbjct: 389 RVGFAK 394
>OTX1_HUMAN (P32242) Homeobox protein OTX1| Length = 354 Score = 28.9 bits (63), Expect = 4.9 Identities = 15/50 (30%), Positives = 22/50 (44%) Frame = +3 Query: 207 NPXXXXXXXXXXXXXXIWAPPRITAGAPPSPASISTNATHAVPGLTSTIE 356 NP IW+P I+ G+ +PAS+S A P TS ++ Sbjct: 160 NPVAAASSLSTPAASSIWSPASISPGS--APASVSVPEPLAAPSNTSCMQ 207
>FSH_DROME (P13709) Homeotic protein female sterile (Fragile-chorion membrane| protein) Length = 2038 Score = 28.9 bits (63), Expect = 4.9 Identities = 14/25 (56%), Positives = 15/25 (60%) Frame = +3 Query: 276 TAGAPPSPASISTNATHAVPGLTST 350 TAG PS IST H VPG T+T Sbjct: 249 TAGGAPSIPPISTMPPHTVPGSTNT 273
>ATG21_ASHGO (Q75D34) Autophagy-related protein 21| Length = 409 Score = 28.9 bits (63), Expect = 4.9 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = -2 Query: 117 YVISLFIYSVLSITPCNNNNPVHRG 43 Y+ L +Y L++TP N N VH+G Sbjct: 200 YINDLVVYDALNMTPLNYLNTVHKG 224
>CATD_BOVIN (P80209) Cathepsin D precursor (EC 3.4.23.5)| Length = 390 Score = 28.5 bits (62), Expect = 6.4 Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 3/72 (4%) Frame = -1 Query: 415 VPNVVLALDGGGEWAMTGKNSMVDVKPG--TACVA-FVEMEAGDGGAPAVILGGAQMEDF 245 +P V + L GG ++A++ ++ + V T C++ F+ M+ G P ILG + + Sbjct: 313 LPEVTVKL-GGKDYALSPEDYALKVSQAETTVCLSGFMGMDIPPPGGPLWILGDVFIGRY 371 Query: 244 VLDFDMEKKRLG 209 FD ++ R+G Sbjct: 372 YTVFDRDQNRVG 383
>CATD_CANFA (Q4LAL9) Cathepsin D precursor (EC 3.4.23.5)| Length = 410 Score = 28.5 bits (62), Expect = 6.4 Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%) Frame = -1 Query: 415 VPNVVLALDGGGEWAMTGKNSMVDVKPG--TACVA-FVEMEAGDGGAPAVILGGAQMEDF 245 +P+V L L GG + ++ ++ + V G T C++ F+ M+ G P ILG + + Sbjct: 333 LPDVTLKL-GGKLYKLSSEDYTLKVSQGGKTICLSGFMGMDIPPPGGPLWILGDVFIGCY 391 Query: 244 VLDFDMEKKRLG 209 FD ++ R+G Sbjct: 392 YTVFDRDQNRVG 403
>Y1408_METKA (Q8TVI1) UPF0245 protein MK1408| Length = 402 Score = 28.5 bits (62), Expect = 6.4 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = -1 Query: 355 SMVDVKPGTACVAFVEMEAGDG 290 S+VD+KPG +A+VE E G G Sbjct: 367 SVVDLKPGDKVLAYVETEEGKG 388
>CX6A1_MOUSE (P43024) Cytochrome c oxidase polypeptide VIa-liver, mitochondrial| precursor (EC 1.9.3.1) Length = 111 Score = 28.1 bits (61), Expect = 8.3 Identities = 15/36 (41%), Positives = 18/36 (50%) Frame = +2 Query: 269 EDHRRRPAVAGLHLHERNARRPWLDVHHRVLPGHRP 376 E+H R P VA HL R PW D +H + H P Sbjct: 66 EEHERPPFVAYPHLRIRTKPFPWGDGNHTLF--HNP 99
>ASPR_HORVU (P42210) Phytepsin precursor (EC 3.4.23.40) (Aspartic proteinase)| [Contains: Phytepsin 32 kDa subunit; Phytepsin 29 kDa subunit; Phytepsin 16 kDa subunit; Phytepsin 11 kDa subunit] Length = 508 Score = 28.1 bits (61), Expect = 8.3 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%) Frame = -1 Query: 388 GGGEWAMTGKNSMVDVKPGTA--CVA-FVEMEAGDGGAPAVILGGAQMEDFVLDFDMEKK 218 GG ++A+ + ++ V G A C++ F M+ P ILG M + FD K Sbjct: 441 GGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKL 500 Query: 217 RLGFIR 200 R+GF + Sbjct: 501 RIGFAK 506
>DGA1_SCHPO (O74850) Diacylglycerol O-acyltransferase 1 (EC 2.3.1.20)| (Diglyceride acyltransferase) Length = 345 Score = 28.1 bits (61), Expect = 8.3 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 6/55 (10%) Frame = -1 Query: 328 ACVAFVEMEAGD------GGAPAVILGGAQMEDFVLDFDMEKKRLGFIRLPHFTG 182 +CV+ + + GD GGA +L + VL KKR GF++L TG Sbjct: 178 SCVSILSRKPGDSVLIVIGGAQESLLSRPGQNNLVL-----KKRFGFVKLAFLTG 227
>CATD_PIG (P00795) Cathepsin D precursor (EC 3.4.23.5) [Contains: Cathepsin D| light chain; Cathepsin D heavy chain] Length = 345 Score = 28.1 bits (61), Expect = 8.3 Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 3/72 (4%) Frame = -1 Query: 415 VPNVVLALDGGGEWAMTGKNSMVDVKPG--TACVA-FVEMEAGDGGAPAVILGGAQMEDF 245 +P+V + L GG ++ ++ +N + V T C++ F+ M+ G P ILG + + Sbjct: 270 LPDVTVTL-GGKKYKLSSENYTLKVSQAGQTICLSGFMGMDIPPPGGPLWILGDVFIGRY 328 Query: 244 VLDFDMEKKRLG 209 FD + R+G Sbjct: 329 YTVFDRDLNRVG 340 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,695,474 Number of Sequences: 219361 Number of extensions: 975972 Number of successful extensions: 3210 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 3079 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3210 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)