ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet92h09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
17SBG2_SOYBN (Q8RVH5) Basic 7S globulin 2 precursor (Bg) (SBg7S) ... 45 7e-05
27SB1_SOYBN (P13917) Basic 7S globulin precursor (Bg) (SBg7S) [Co... 44 1e-04
3ATG21_CANGA (Q6FRU4) Autophagy-related protein 21 30 1.7
4ASP3_CAEEL (P55956) Aspartic protease 3 precursor (EC 3.4.23.-) 30 1.7
5CATD_CLUHA (Q9DEX3) Cathepsin D precursor (EC 3.4.23.5) 29 4.9
6OTX1_HUMAN (P32242) Homeobox protein OTX1 29 4.9
7FSH_DROME (P13709) Homeotic protein female sterile (Fragile-chor... 29 4.9
8ATG21_ASHGO (Q75D34) Autophagy-related protein 21 29 4.9
9CATD_BOVIN (P80209) Cathepsin D precursor (EC 3.4.23.5) 28 6.4
10CATD_CANFA (Q4LAL9) Cathepsin D precursor (EC 3.4.23.5) 28 6.4
11Y1408_METKA (Q8TVI1) UPF0245 protein MK1408 28 6.4
12CX6A1_MOUSE (P43024) Cytochrome c oxidase polypeptide VIa-liver,... 28 8.3
13ASPR_HORVU (P42210) Phytepsin precursor (EC 3.4.23.40) (Aspartic... 28 8.3
14DGA1_SCHPO (O74850) Diacylglycerol O-acyltransferase 1 (EC 2.3.1... 28 8.3
15CATD_PIG (P00795) Cathepsin D precursor (EC 3.4.23.5) [Contains:... 28 8.3

>7SBG2_SOYBN (Q8RVH5) Basic 7S globulin 2 precursor (Bg) (SBg7S) [Contains:|
           Basic 7S globulin 2 high-kDa subunit; Basic 7S globulin
           2 low-kDa subunit]
          Length = 433

 Score = 45.1 bits (105), Expect = 7e-05
 Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
 Frame = -1

Query: 412 PNVVLALD--GGGEWAMTGKNSMVDVKPGTACVAFVEMEAGDGGAPAVILGGAQMEDFVL 239
           P+V L +D   G  W ++G++ MV  +PG  C+    M  G      V LG  Q+E+ ++
Sbjct: 344 PSVDLVMDKPNGPVWRISGEDLMVQAQPGVTCLGV--MNGGMQPRAEVTLGTRQLEEKLM 401

Query: 238 DFDMEKKRLGFIRL---PHFTGCGNL 170
            FD+ + R+GF       H   CG+L
Sbjct: 402 VFDLARSRVGFSTSSLHSHGVKCGDL 427



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>7SB1_SOYBN (P13917) Basic 7S globulin precursor (Bg) (SBg7S) [Contains: Basic|
           7S globulin high-kDa subunit; Basic 7S globulin low-kDa
           subunit]
          Length = 427

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
 Frame = -1

Query: 412 PNVVLALD--GGGEWAMTGKNSMVDVKPGTACVAFVEMEAGDGGAPAVILGGAQMEDFVL 239
           P+V L +D   G  W ++G++ MV  +PG  C+    M  G      + LG  Q+E+ ++
Sbjct: 338 PSVDLVMDKPNGPVWRISGEDLMVQAQPGVTCLGV--MNGGMQPRAEITLGARQLEENLV 395

Query: 238 DFDMEKKRLGF 206
            FD+ + R+GF
Sbjct: 396 VFDLARSRVGF 406



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>ATG21_CANGA (Q6FRU4) Autophagy-related protein 21|
          Length = 453

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -2

Query: 105 LFIYSVLSITPCNNNNPVHRGCILR 31
           + +Y  L++ P N  N VH+GC+L+
Sbjct: 245 IVVYDALNLKPINYLNSVHKGCVLK 269



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>ASP3_CAEEL (P55956) Aspartic protease 3 precursor (EC 3.4.23.-)|
          Length = 398

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
 Frame = -1

Query: 415 VPNVVLALDGGGEWAMTGKNSMVDVKPG----TACVAFVEMEAGDGGAPAVILGGAQMED 248
           +PN+   L GG  + + GK+ ++ +  G    T    F+ M+      P  ILG   +  
Sbjct: 319 LPNITFNL-GGQNFDLQGKDYILQMSNGNGGSTCLSGFMGMDIPAPAGPLWILGDVFIGR 377

Query: 247 FVLDFDMEKKRLGF 206
           F   FD   KR+GF
Sbjct: 378 FYSVFDHGNKRVGF 391



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>CATD_CLUHA (Q9DEX3) Cathepsin D precursor (EC 3.4.23.5)|
          Length = 396

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
 Frame = -1

Query: 388 GGGEWAMTGKNSMVDVKPG--TACVA-FVEMEAGDGGAPAVILGGAQMEDFVLDFDMEKK 218
           GG  +++TG+  ++    G  T C++  + +E      P  ILG   +  +   FD E  
Sbjct: 329 GGKTYSLTGEQYVLKESQGGKTICLSGLMGLEIPPPAGPLWILGDVFIGQYYTVFDRESN 388

Query: 217 RLGFIR 200
           R+GF +
Sbjct: 389 RVGFAK 394



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>OTX1_HUMAN (P32242) Homeobox protein OTX1|
          Length = 354

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = +3

Query: 207 NPXXXXXXXXXXXXXXIWAPPRITAGAPPSPASISTNATHAVPGLTSTIE 356
           NP              IW+P  I+ G+  +PAS+S     A P  TS ++
Sbjct: 160 NPVAAASSLSTPAASSIWSPASISPGS--APASVSVPEPLAAPSNTSCMQ 207



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>FSH_DROME (P13709) Homeotic protein female sterile (Fragile-chorion membrane|
           protein)
          Length = 2038

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 14/25 (56%), Positives = 15/25 (60%)
 Frame = +3

Query: 276 TAGAPPSPASISTNATHAVPGLTST 350
           TAG  PS   IST   H VPG T+T
Sbjct: 249 TAGGAPSIPPISTMPPHTVPGSTNT 273



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>ATG21_ASHGO (Q75D34) Autophagy-related protein 21|
          Length = 409

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 117 YVISLFIYSVLSITPCNNNNPVHRG 43
           Y+  L +Y  L++TP N  N VH+G
Sbjct: 200 YINDLVVYDALNMTPLNYLNTVHKG 224



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>CATD_BOVIN (P80209) Cathepsin D precursor (EC 3.4.23.5)|
          Length = 390

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
 Frame = -1

Query: 415 VPNVVLALDGGGEWAMTGKNSMVDVKPG--TACVA-FVEMEAGDGGAPAVILGGAQMEDF 245
           +P V + L GG ++A++ ++  + V     T C++ F+ M+    G P  ILG   +  +
Sbjct: 313 LPEVTVKL-GGKDYALSPEDYALKVSQAETTVCLSGFMGMDIPPPGGPLWILGDVFIGRY 371

Query: 244 VLDFDMEKKRLG 209
              FD ++ R+G
Sbjct: 372 YTVFDRDQNRVG 383



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>CATD_CANFA (Q4LAL9) Cathepsin D precursor (EC 3.4.23.5)|
          Length = 410

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
 Frame = -1

Query: 415 VPNVVLALDGGGEWAMTGKNSMVDVKPG--TACVA-FVEMEAGDGGAPAVILGGAQMEDF 245
           +P+V L L GG  + ++ ++  + V  G  T C++ F+ M+    G P  ILG   +  +
Sbjct: 333 LPDVTLKL-GGKLYKLSSEDYTLKVSQGGKTICLSGFMGMDIPPPGGPLWILGDVFIGCY 391

Query: 244 VLDFDMEKKRLG 209
              FD ++ R+G
Sbjct: 392 YTVFDRDQNRVG 403



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>Y1408_METKA (Q8TVI1) UPF0245 protein MK1408|
          Length = 402

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = -1

Query: 355 SMVDVKPGTACVAFVEMEAGDG 290
           S+VD+KPG   +A+VE E G G
Sbjct: 367 SVVDLKPGDKVLAYVETEEGKG 388



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>CX6A1_MOUSE (P43024) Cytochrome c oxidase polypeptide VIa-liver, mitochondrial|
           precursor (EC 1.9.3.1)
          Length = 111

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +2

Query: 269 EDHRRRPAVAGLHLHERNARRPWLDVHHRVLPGHRP 376
           E+H R P VA  HL  R    PW D +H +   H P
Sbjct: 66  EEHERPPFVAYPHLRIRTKPFPWGDGNHTLF--HNP 99



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>ASPR_HORVU (P42210) Phytepsin precursor (EC 3.4.23.40) (Aspartic proteinase)|
           [Contains: Phytepsin 32 kDa subunit; Phytepsin 29 kDa
           subunit; Phytepsin 16 kDa subunit; Phytepsin 11 kDa
           subunit]
          Length = 508

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
 Frame = -1

Query: 388 GGGEWAMTGKNSMVDVKPGTA--CVA-FVEMEAGDGGAPAVILGGAQMEDFVLDFDMEKK 218
           GG ++A+  +  ++ V  G A  C++ F  M+      P  ILG   M  +   FD  K 
Sbjct: 441 GGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKL 500

Query: 217 RLGFIR 200
           R+GF +
Sbjct: 501 RIGFAK 506



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>DGA1_SCHPO (O74850) Diacylglycerol O-acyltransferase 1 (EC 2.3.1.20)|
           (Diglyceride acyltransferase)
          Length = 345

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
 Frame = -1

Query: 328 ACVAFVEMEAGD------GGAPAVILGGAQMEDFVLDFDMEKKRLGFIRLPHFTG 182
           +CV+ +  + GD      GGA   +L      + VL     KKR GF++L   TG
Sbjct: 178 SCVSILSRKPGDSVLIVIGGAQESLLSRPGQNNLVL-----KKRFGFVKLAFLTG 227



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>CATD_PIG (P00795) Cathepsin D precursor (EC 3.4.23.5) [Contains: Cathepsin D|
           light chain; Cathepsin D heavy chain]
          Length = 345

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
 Frame = -1

Query: 415 VPNVVLALDGGGEWAMTGKNSMVDVKPG--TACVA-FVEMEAGDGGAPAVILGGAQMEDF 245
           +P+V + L GG ++ ++ +N  + V     T C++ F+ M+    G P  ILG   +  +
Sbjct: 270 LPDVTVTL-GGKKYKLSSENYTLKVSQAGQTICLSGFMGMDIPPPGGPLWILGDVFIGRY 328

Query: 244 VLDFDMEKKRLG 209
              FD +  R+G
Sbjct: 329 YTVFDRDLNRVG 340


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,695,474
Number of Sequences: 219361
Number of extensions: 975972
Number of successful extensions: 3210
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3210
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2169600302
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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