ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet92f08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X91659.1|HVEXTGENE H.vulgare mRNA for endoxyloglucan transfe... 735 0.0
2dbj|D16457.1|WHTEXT4 Wheat mRNA for endo-xyloglucan transferase,... 256 4e-65
3gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome... 161 2e-36
4gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome... 161 2e-36
5dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 161 2e-36
6dbj|AK071574.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 2e-36
7dbj|AK061093.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 2e-36
8gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 161 2e-36
9gb|AY104207.1| Zea mays PCO111099 mRNA sequence 100 6e-18
10gb|AY144593.1| Malus x domestica xyloglucan endotransglycosylase... 46 0.080
11ref|NM_121390.3| Arabidopsis thaliana EXGT-A4 (ENDOXYLOGLUCAN TR... 44 0.32
12emb|BX830569.1|CNS0A1EU Arabidopsis thaliana Full-length cDNA Co... 44 0.32
13emb|BX831074.1|CNS0A0QQ Arabidopsis thaliana Full-length cDNA Co... 44 0.32
14gb|AC152829.2| Ornithorhynchus anatinus BAC clone OABb-466A1 fro... 44 0.32
15dbj|AK176228.1| Arabidopsis thaliana mRNA for endoxyloglucan tra... 44 0.32
16dbj|AB005230.2| Arabidopsis thaliana genomic DNA, chromosome 5, ... 44 0.32
17gb|AF163822.1|AF163822 Arabidopsis thaliana endoxyloglucan trans... 44 0.32
18dbj|AB086395.1| Vigna angularis VaXTH1 gene for xyloglucan endot... 44 0.32
19dbj|D16458.1|VIREXT5 V.angularis mRNA for endo-xyloglucan transf... 44 0.32
20dbj|D16455.1|SOYEXT2 Soybean mRNA for endo-xyloglucan transferas... 44 0.32
21dbj|AB026486.1| Arabidopsis thaliana EXGT-A4 mRNA for endoxylogl... 44 0.32
22gb|AY841854.1| Vigna radiata xyloglucan endotransglucosylase/hyd... 42 1.3
23gb|AE001416.2| Plasmodium falciparum 3D7 chromosome 2 section 53... 42 1.3
24gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 42 1.3
25gb|AC093368.4| Homo sapiens chromosome 8, clone RP11-783P22, com... 42 1.3
26gb|AC104576.5| Homo sapiens chromosome 8, clone RP11-790L1, comp... 42 1.3
27dbj|AB196977.1| Sagittaria pygmaea SpXTH4 mRNA for xyloglucan en... 42 1.3
28dbj|AB086396.1| Vigna angularis VaXTH2 gene for xyloglucan endot... 42 1.3
29gb|DQ279095.1| Rosa x borboniana xyloglucan endotransglucosylase... 42 1.3
30ref|XM_362730.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 4.9
31gb|AC140216.3| Mus musculus BAC clone RP23-276B20 from chromosom... 40 4.9
32emb|AJ811689.1| Pyrus communis xet gene for xyloglucan endotrans... 40 4.9
33dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011 40 4.9
34dbj|AK140479.1| Mus musculus 10 days neonate cerebellum cDNA, RI... 40 4.9
35gb|DP000051.1| Carollia perspicillata target 126 genomic scaffold 40 4.9
36gb|AC161058.2| Mus musculus BAC clone RP23-205J6 from chromosome... 40 4.9
37dbj|AB095368.1| Pyrus communis PC-XET1 mRNA for xyloglucan endot... 40 4.9
38gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 4.9
39gb|L46792.1|ACTXET Actinidia deliciosa clone AdXET-5 xyloglucan ... 40 4.9
40gb|AC122201.4| Mus musculus BAC clone RP23-64I9 from 6, complete... 40 4.9 
>emb|X91659.1|HVEXTGENE H.vulgare mRNA for endoxyloglucan transferase
          Length = 1175

 Score =  735 bits (371), Expect = 0.0
 Identities = 371/371 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    gagcgaatatgattattattatagcatacttagttggatcatgcgtgagcaatcagaaga 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1175 gagcgaatatgattattattatagcatacttagttggatcatgcgtgagcaatcagaaga 1116

                                                                        
Query: 61   ataataaagcacgcatgagcatacagacacgtagggatacaaattcctcgtactagtaca 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1115 ataataaagcacgcatgagcatacagacacgtagggatacaaattcctcgtactagtaca 1056

                                                                        
Query: 121  tctcatcgaccgcaccgcgaccggtggtacaacaacaactactgtagtagcggtccttta 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1055 tctcatcgaccgcaccgcgaccggtggtacaacaacaactactgtagtagcggtccttta 996

                                                                        
Query: 181  catcagtagtagtaagtaaagtatatcacgctcagacgtcgcggtcgcgtttgcactcgg 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 995  catcagtagtagtaagtaaagtatatcacgctcagacgtcgcggtcgcgtttgcactcgg 936

                                                                        
Query: 241  gcgacatggcggcgtatcgttcgcggtctgtgcagtagttgtagatggtgtgctccttcc 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 935  gcgacatggcggcgtatcgttcgcggtctgtgcagtagttgtagatggtgtgctccttcc 876

                                                                        
Query: 301  tgacccaggcgaggcggcggtactgcgcggcgtccaggtcctggaactcgggctgatccc 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875  tgacccaggcgaggcggcggtactgcgcggcgtccaggtcctggaactcgggctgatccc 816

                       
Query: 361  accagcgggcg 371
            |||||||||||
Sbjct: 815  accagcgggcg 805
to top
>dbj|D16457.1|WHTEXT4 Wheat mRNA for endo-xyloglucan transferase, complete cds
          Length = 1088

 Score =  256 bits (129), Expect = 4e-65
 Identities = 153/161 (95%)
 Strand = Plus / Minus

                                                                       
Query: 211 ctcagacgtcgcggtcgcgtttgcactcgggcgacatggcggcgtatcgttcgcggtctg 270
           ||||||||||||||||||| |||||||| |||| |||||||||||| || ||| |||| |
Sbjct: 926 ctcagacgtcgcggtcgcgcttgcactctggcgccatggcggcgtagcggtcgtggtcgg 867

                                                                       
Query: 271 tgcagtagttgtagatggtgtgctccttcctgacccaggcgaggcggcggtactgcgcgg 330
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 tgcagtagttgtagatggtgtgctccttcctgacccaggcgaggcggcggtactgcgcgg 807

                                                    
Query: 331 cgtccaggtcctggaactcgggctgatcccaccagcgggcg 371
           ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 806 cgtccaggtcctggaactcgggctggtcccaccagcgggcg 766



 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 64/71 (90%)
 Strand = Plus / Minus

                                                                        
Query: 91   gtagggatacaaattcctcgtactagtacatctcatcgaccgcaccgcgaccggtggtac 150
            ||||||||||||||||||||||||| ||  ||||| |||||||||||||||| | || ||
Sbjct: 1039 gtagggatacaaattcctcgtactactaggtctcagcgaccgcaccgcgaccagcggcac 980

                       
Query: 151  aacaacaacta 161
            |||||||||||
Sbjct: 979  aacaacaacta 969
to top
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17,
              complete sequence
          Length = 148829

 Score =  161 bits (81), Expect = 2e-36
 Identities = 141/161 (87%)
 Strand = Plus / Minus

                                                                          
Query: 211    ctcagacgtcgcggtcgcgtttgcactcgggcgacatggcggcgtatcgttcgcggtctg 270
              ||||| ||||||||||||| | |||||||||||||||||||| ||| |||||||||||  
Sbjct: 115781 ctcaggcgtcgcggtcgcggtggcactcgggcgacatggcggggtagcgttcgcggtcgt 115722

                                                                          
Query: 271    tgcagtagttgtagatggtgtgctccttcctgacccaggcgaggcggcggtactgcgcgg 330
               ||||||||||||||||||||||  ||| | ||||||||||||||||||||||||  |||
Sbjct: 115721 cgcagtagttgtagatggtgtgcgtcttgcggacccaggcgaggcggcggtactggtcgg 115662

                                                       
Query: 331    cgtccaggtcctggaactcgggctgatcccaccagcgggcg 371
              |||| |||||  ||||||| ||||| |||||||| ||||||
Sbjct: 115661 cgtcgaggtcgcggaactccggctggtcccaccaccgggcg 115621
to top
>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0007D07, complete sequence
          Length = 133930

 Score =  161 bits (81), Expect = 2e-36
 Identities = 141/161 (87%)
 Strand = Plus / Minus

                                                                         
Query: 211   ctcagacgtcgcggtcgcgtttgcactcgggcgacatggcggcgtatcgttcgcggtctg 270
             ||||| ||||||||||||| | |||||||||||||||||||| ||| |||||||||||  
Sbjct: 15400 ctcaggcgtcgcggtcgcggtggcactcgggcgacatggcggggtagcgttcgcggtcgt 15341

                                                                         
Query: 271   tgcagtagttgtagatggtgtgctccttcctgacccaggcgaggcggcggtactgcgcgg 330
              ||||||||||||||||||||||  ||| | ||||||||||||||||||||||||  |||
Sbjct: 15340 cgcagtagttgtagatggtgtgcgtcttgcggacccaggcgaggcggcggtactggtcgg 15281

                                                      
Query: 331   cgtccaggtcctggaactcgggctgatcccaccagcgggcg 371
             |||| |||||  ||||||| ||||| |||||||| ||||||
Sbjct: 15280 cgtcgaggtcgcggaactccggctggtcccaccaccgggcg 15240
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  161 bits (81), Expect = 2e-36
 Identities = 141/161 (87%)
 Strand = Plus / Minus

                                                                            
Query: 211      ctcagacgtcgcggtcgcgtttgcactcgggcgacatggcggcgtatcgttcgcggtctg 270
                ||||| ||||||||||||| | |||||||||||||||||||| ||| |||||||||||  
Sbjct: 19012583 ctcaggcgtcgcggtcgcggtggcactcgggcgacatggcggggtagcgttcgcggtcgt 19012524

                                                                            
Query: 271      tgcagtagttgtagatggtgtgctccttcctgacccaggcgaggcggcggtactgcgcgg 330
                 ||||||||||||||||||||||  ||| | ||||||||||||||||||||||||  |||
Sbjct: 19012523 cgcagtagttgtagatggtgtgcgtcttgcggacccaggcgaggcggcggtactggtcgg 19012464

                                                         
Query: 331      cgtccaggtcctggaactcgggctgatcccaccagcgggcg 371
                |||| |||||  ||||||| ||||| |||||||| ||||||
Sbjct: 19012463 cgtcgaggtcgcggaactccggctggtcccaccaccgggcg 19012423
to top
>dbj|AK071574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105D14, full
           insert sequence
          Length = 977

 Score =  161 bits (81), Expect = 2e-36
 Identities = 141/161 (87%)
 Strand = Plus / Minus

                                                                       
Query: 211 ctcagacgtcgcggtcgcgtttgcactcgggcgacatggcggcgtatcgttcgcggtctg 270
           ||||| ||||||||||||| | |||||||||||||||||||| ||| |||||||||||  
Sbjct: 916 ctcaggcgtcgcggtcgcggtggcactcgggcgacatggcggggtagcgttcgcggtcgt 857

                                                                       
Query: 271 tgcagtagttgtagatggtgtgctccttcctgacccaggcgaggcggcggtactgcgcgg 330
            ||||||||||||||||||||||  ||| | ||||||||||||||||||||||||  |||
Sbjct: 856 cgcagtagttgtagatggtgtgcgtcttgcggacccaggcgaggcggcggtactggtcgg 797

                                                    
Query: 331 cgtccaggtcctggaactcgggctgatcccaccagcgggcg 371
           |||| |||||  ||||||| ||||| |||||||| ||||||
Sbjct: 796 cgtcgaggtcgcggaactccggctggtcccaccaccgggcg 756
to top
>dbj|AK061093.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-A02, full
           insert sequence
          Length = 1053

 Score =  161 bits (81), Expect = 2e-36
 Identities = 141/161 (87%)
 Strand = Plus / Minus

                                                                       
Query: 211 ctcagacgtcgcggtcgcgtttgcactcgggcgacatggcggcgtatcgttcgcggtctg 270
           ||||| ||||||||||||| | |||||||||||||||||||| ||| |||||||||||  
Sbjct: 913 ctcaggcgtcgcggtcgcggtggcactcgggcgacatggcggggtagcgttcgcggtcgt 854

                                                                       
Query: 271 tgcagtagttgtagatggtgtgctccttcctgacccaggcgaggcggcggtactgcgcgg 330
            ||||||||||||||||||||||  ||| | ||||||||||||||||||||||||  |||
Sbjct: 853 cgcagtagttgtagatggtgtgcgtcttgcggacccaggcgaggcggcggtactggtcgg 794

                                                    
Query: 331 cgtccaggtcctggaactcgggctgatcccaccagcgggcg 371
           |||| |||||  ||||||| ||||| |||||||| ||||||
Sbjct: 793 cgtcgaggtcgcggaactccggctggtcccaccaccgggcg 753
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  161 bits (81), Expect = 2e-36
 Identities = 141/161 (87%)
 Strand = Plus / Minus

                                                                            
Query: 211      ctcagacgtcgcggtcgcgtttgcactcgggcgacatggcggcgtatcgttcgcggtctg 270
                ||||| ||||||||||||| | |||||||||||||||||||| ||| |||||||||||  
Sbjct: 19171232 ctcaggcgtcgcggtcgcggtggcactcgggcgacatggcggggtagcgttcgcggtcgt 19171173

                                                                            
Query: 271      tgcagtagttgtagatggtgtgctccttcctgacccaggcgaggcggcggtactgcgcgg 330
                 ||||||||||||||||||||||  ||| | ||||||||||||||||||||||||  |||
Sbjct: 19171172 cgcagtagttgtagatggtgtgcgtcttgcggacccaggcgaggcggcggtactggtcgg 19171113

                                                         
Query: 331      cgtccaggtcctggaactcgggctgatcccaccagcgggcg 371
                |||| |||||  ||||||| ||||| |||||||| ||||||
Sbjct: 19171112 cgtcgaggtcgcggaactccggctggtcccaccaccgggcg 19171072
to top
>gb|AY104207.1| Zea mays PCO111099 mRNA sequence
          Length = 1202

 Score = 99.6 bits (50), Expect = 6e-18
 Identities = 135/160 (84%), Gaps = 5/160 (3%)
 Strand = Plus / Minus

                                                                       
Query: 212 tcagacgtcgcggtcgcgtttgcactcgggcgacatggcggcg---tatcgttcgcggtc 268
           ||||||||||||||||||   ||||||||||| || |||||||   || || ||||| ||
Sbjct: 941 tcagacgtcgcggtcgcgggcgcactcgggcggcacggcggcgccgtagcggtcgcgatc 882

                                                                       
Query: 269 tgtgcagtagttgtagatggtgt-gctccttcctgacccaggcgaggcggcggtactgcg 327
            |||||||||||||||||||||| ||  |  |||||||  ||| ||||||||||||||||
Sbjct: 881 ggtgcagtagttgtagatggtgtagcggcg-cctgacctcggccaggcggcggtactgcg 823

                                                   
Query: 328 cggcgtccaggtcctggaactcgggctgatcccaccagcg 367
           ||||||| ||||||  |||||| ||||| |||||||||||
Sbjct: 822 cggcgtcgaggtccctgaactccggctggtcccaccagcg 783
to top
>gb|AY144593.1| Malus x domestica xyloglucan endotransglycosylase (XET01) mRNA,
           complete cds
          Length = 1268

 Score = 46.1 bits (23), Expect = 0.080
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 264 cggtctgtgcagtagttgtagatggtg 290
           ||||| |||||||||||||||||||||
Sbjct: 890 cggtcagtgcagtagttgtagatggtg 864
to top
>ref|NM_121390.3| Arabidopsis thaliana EXGT-A4 (ENDOXYLOGLUCAN TRANSFERASE A4);
            hydrolase, acting on glycosyl bonds / hydrolase,
            hydrolyzing O-glycosyl compounds AT5G13870 (EXGT-A4)
            mRNA, complete cds
          Length = 1386

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 262  cgcggtctgtgcagtagttgtagatggtgt 291
            ||||||| ||||| ||||||||||||||||
Sbjct: 1229 cgcggtcagtgcaatagttgtagatggtgt 1200
to top
>emb|BX830569.1|CNS0A1EU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB90ZE02 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1347

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 262  cgcggtctgtgcagtagttgtagatggtgt 291
            ||||||| ||||| ||||||||||||||||
Sbjct: 1229 cgcggtcagtgcaatagttgtagatggtgt 1200
to top
>emb|BX831074.1|CNS0A0QQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS55ZF02 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1362

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 262  cgcggtctgtgcagtagttgtagatggtgt 291
            ||||||| ||||| ||||||||||||||||
Sbjct: 1220 cgcggtcagtgcaatagttgtagatggtgt 1191
to top
>gb|AC152829.2| Ornithorhynchus anatinus BAC clone OABb-466A1 from chromosome unknown,
             complete sequence
          Length = 160523

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 9     atgattattattatagcatact 30
             ||||||||||||||||||||||
Sbjct: 33686 atgattattattatagcatact 33665
to top
>dbj|AK176228.1| Arabidopsis thaliana mRNA for endoxyloglucan transferase, complete
           cds, clone: RAFL23-11-K19
          Length = 1028

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 262 cgcggtctgtgcagtagttgtagatggtgt 291
           ||||||| ||||| ||||||||||||||||
Sbjct: 852 cgcggtcagtgcaatagttgtagatggtgt 823
to top
>dbj|AB005230.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MAC12
          Length = 74613

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 262   cgcggtctgtgcagtagttgtagatggtgt 291
             ||||||| ||||| ||||||||||||||||
Sbjct: 25611 cgcggtcagtgcaatagttgtagatggtgt 25640
to top
>gb|AF163822.1|AF163822 Arabidopsis thaliana endoxyloglucan transferase (EXGT-A4) gene,
            complete cds
          Length = 2645

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 262  cgcggtctgtgcagtagttgtagatggtgt 291
            ||||||| ||||| ||||||||||||||||
Sbjct: 2377 cgcggtcagtgcaatagttgtagatggtgt 2348
to top
>dbj|AB086395.1| Vigna angularis VaXTH1 gene for xyloglucan
            endotransglucosylase/hydrolase, complete cds
          Length = 1913

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 270  gtgcagtagttgtagatggtgt 291
            ||||||||||||||||||||||
Sbjct: 1607 gtgcagtagttgtagatggtgt 1586
to top
>dbj|D16458.1|VIREXT5 V.angularis mRNA for endo-xyloglucan transferase, complete cds
          Length = 1319

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 270 gtgcagtagttgtagatggtgt 291
           ||||||||||||||||||||||
Sbjct: 996 gtgcagtagttgtagatggtgt 975
to top
>dbj|D16455.1|SOYEXT2 Soybean mRNA for endo-xyloglucan transferase, partial cds
          Length = 975

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 270 gtgcagtagttgtagatggtgt 291
           ||||||||||||||||||||||
Sbjct: 829 gtgcagtagttgtagatggtgt 808
to top
>dbj|AB026486.1| Arabidopsis thaliana EXGT-A4 mRNA for endoxyloglucan transferase,
           complete cds
          Length = 1050

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 262 cgcggtctgtgcagtagttgtagatggtgt 291
           ||||||| ||||| ||||||||||||||||
Sbjct: 872 cgcggtcagtgcaatagttgtagatggtgt 843
to top
>gb|AY841854.1| Vigna radiata xyloglucan endotransglucosylase/hydrolase precursor
           (XTH1) mRNA, complete cds
          Length = 1112

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 270 gtgcagtagttgtagatggtg 290
           |||||||||||||||||||||
Sbjct: 809 gtgcagtagttgtagatggtg 789
to top
>gb|AE001416.2| Plasmodium falciparum 3D7 chromosome 2 section 53 of 73 of the
            complete sequence
          Length = 17429

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 6    aatatgattattattatagca 26
            |||||||||||||||||||||
Sbjct: 2013 aatatgattattattatagca 2033
to top
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 317     gcggtactgcgcggcgtccaggtcc 341
               ||||| |||||||||||||||||||
Sbjct: 2666683 gcggttctgcgcggcgtccaggtcc 2666707
to top
>gb|AC093368.4| Homo sapiens chromosome 8, clone RP11-783P22, complete sequence
          Length = 158535

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 47    gagcaatcagaagaataataa 67
             |||||||||||||||||||||
Sbjct: 24758 gagcaatcagaagaataataa 24738
to top
>gb|AC104576.5| Homo sapiens chromosome 8, clone RP11-790L1, complete sequence
          Length = 174399

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 47    gagcaatcagaagaataataa 67
             |||||||||||||||||||||
Sbjct: 43813 gagcaatcagaagaataataa 43833
to top
>dbj|AB196977.1| Sagittaria pygmaea SpXTH4 mRNA for xyloglucan
            endotransglucosylase/hydrolase, complete cds
          Length = 1181

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 266  gtctgtgcagtagttgtagat 286
            |||||||||||||||||||||
Sbjct: 1065 gtctgtgcagtagttgtagat 1045
to top
>dbj|AB086396.1| Vigna angularis VaXTH2 gene for xyloglucan
            endotransglucosylase/hydrolase, complete cds
          Length = 1712

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 270  gtgcagtagttgtagatggtg 290
            |||||||||||||||||||||
Sbjct: 1446 gtgcagtagttgtagatggtg 1426
to top
>gb|DQ279095.1| Rosa x borboniana xyloglucan endotransglucosylase hydrolase mRNA,
           complete cds
          Length = 1130

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 270 gtgcagtagttgtagatggtg 290
           |||||||||||||||||||||
Sbjct: 868 gtgcagtagttgtagatggtg 848
to top
>ref|XM_362730.1| Magnaporthe grisea 70-15 hypothetical protein (MG08318.4) partial
           mRNA
          Length = 816

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 320 gtactgcgcggcgtccaggtcctggaactcgg 351
           |||| |||| |||||||||||| |||||||||
Sbjct: 366 gtacagcgccgcgtccaggtccaggaactcgg 335
to top
>gb|AC140216.3| Mus musculus BAC clone RP23-276B20 from chromosome 5, complete
            sequence
          Length = 194560

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 70   cacgcatgagcatacagaca 89
            ||||||||||||||||||||
Sbjct: 9765 cacgcatgagcatacagaca 9784
to top
>emb|AJ811689.1| Pyrus communis xet gene for xyloglucan endotransglycosilase, exon 1
          Length = 1007

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 271 tgcagtagttgtagatggtg 290
           ||||||||||||||||||||
Sbjct: 925 tgcagtagttgtagatggtg 906
to top
>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011
          Length = 2505489

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 38      atcatgcgtgagcaatcaga 57
               ||||||||||||||||||||
Sbjct: 1688270 atcatgcgtgagcaatcaga 1688251
to top
>dbj|AK140479.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:B930008M23 product:Similar to
           dynein heavy chain at 16F homolog [Homo sapiens], full
           insert sequence
          Length = 4389

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 289 tgtgctccttcctgacccag 308
           ||||||||||||||||||||
Sbjct: 90  tgtgctccttcctgacccag 71
to top
>gb|DP000051.1| Carollia perspicillata target 126 genomic scaffold
          Length = 501879

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     tacagacacgtagggataca 101
              ||||||||||||||||||||
Sbjct: 498467 tacagacacgtagggataca 498448
to top
>gb|AC161058.2| Mus musculus BAC clone RP23-205J6 from chromosome 5, complete sequence
          Length = 222180

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 70    cacgcatgagcatacagaca 89
             ||||||||||||||||||||
Sbjct: 82293 cacgcatgagcatacagaca 82274
to top
>dbj|AB095368.1| Pyrus communis PC-XET1 mRNA for xyloglucan endotransglycosylase,
           partial cds
          Length = 1292

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 271 tgcagtagttgtagatggtg 290
           ||||||||||||||||||||
Sbjct: 949 tgcagtagttgtagatggtg 930
to top
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 325     gcgcggcgtccaggtcctgg 344
               ||||||||||||||||||||
Sbjct: 4628592 gcgcggcgtccaggtcctgg 4628573
to top
>gb|L46792.1|ACTXET Actinidia deliciosa clone AdXET-5 xyloglucan endotransglycosylase
           precursor (XET) mRNA, complete cds
          Length = 1178

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 gtgcagtagttgtagatggt 289
           ||||||||||||||||||||
Sbjct: 855 gtgcagtagttgtagatggt 836
to top
>gb|AC122201.4| Mus musculus BAC clone RP23-64I9 from 6, complete sequence
          Length = 239994

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 289    tgtgctccttcctgacccag 308
              ||||||||||||||||||||
Sbjct: 195584 tgtgctccttcctgacccag 195565


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,397,012
Number of Sequences: 3902068
Number of extensions: 4397012
Number of successful extensions: 59974
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59809
Number of HSP's gapped (non-prelim): 164
length of query: 371
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 349
effective length of database: 17,147,199,772
effective search space: 5984372720428
effective search space used: 5984372720428
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top