>COG1_MOUSE (Q9Z160) Conserved oligomeric Golgi complex component 1 (Low|
           density lipoprotein receptor defect B-complementing
           protein)
          Length = 980

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 230 SLSTIQRNHSQGNGLGGISGERRPC 156
           +L T+ R H  G G+G + GE + C
Sbjct: 293 TLETVTRQHPTGKGIGALQGEMKLC 317

>HBA1_PLEWA (P06639) Hemoglobin alpha-1 subunit (Hemoglobin alpha-1 chain)|
           (Alpha-1-globin) (Hemoglobin alpha-major chain)
          Length = 141

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -1

Query: 240 IPTVPVYYPAKPQPRERAWRNQRGKKTLLSLT 145
           +PT  +Y+PAK      ++ +  GKK + +LT
Sbjct: 36  MPTTRIYFPAKDLSERSSYLHSHGKKVVGALT 67

>NALP2_HUMAN (Q9NX02) NACHT-, LRR- and PYD-containing protein 2 (PYRIN domain-|
           and NACHT domain-containing protein 1) (PYRIN-containing
           APAF1-like protein 2) (Nucleotide-binding site protein
           1)
          Length = 1062

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -1

Query: 162 TLLSLTLVR-LCEMTQSTVG*CKCSTYRSSSMHIAFFHLCLLLRGIDPCTYL 10
           + LS +LVR LCE   S     +   +++ S   A  +LCL LRG    TYL
Sbjct: 709 SFLSASLVRILCEQIASDTCHLQRVVFKNISPADAHRNLCLALRGHKTVTYL 760

>HETR_ANAVT (Q9F5Y3) Heterocyst differentiation control protein (EC 3.4.21.-)|
          Length = 299

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 294 GSQMPRHLISDAHEWINEIPTVP 226
           GSQ PR+LI   + W+ + P +P
Sbjct: 96  GSQEPRYLIQFPYVWMEQYPWIP 118

>HETR_ANASP (P27709) Heterocyst differentiation control protein (EC 3.4.21.-)|
          Length = 298

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 294 GSQMPRHLISDAHEWINEIPTVP 226
           GSQ PR+LI   + W+ + P +P
Sbjct: 95  GSQEPRYLIQFPYVWMEQYPWIP 117

>SYFB_CHLPN (Q9Z7W0) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 792

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -2

Query: 305 DSLKVAKCPVI*LVTRMNGLT-RFPLSLSTIQRNHSQGNGLGGISGERRP 159
           DSL+V K      +T +NG T   P  +  ++ +HS   GLGG+ G + P
Sbjct: 277 DSLRVEKLSTPESLTLLNGETVLLPSGVPVVRDDHSL-LGLGGVMGAKAP 325

>GPR88_RAT (Q9ESP4) Probable G-protein coupled receptor 88 (Striatum-specific|
           G-protein coupled receptor)
          Length = 384

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
 Frame = -1

Query: 219 YPAKPQPRERAWRNQRGKKTLLSLTLVRLCEM----TQSTVG*CKCSTYRSS---SMHIA 61
           +PA+PQP   A + +R ++ L  L+++ LC +    TQ  V     S +       +  A
Sbjct: 261 HPAQPQPLPAALQPRRAQRRLSGLSVLLLCCVFLLATQPLVWVSLASGFSLPVPWGVQAA 320

Query: 60  FFHLCLLLRGIDPCTY 13
            + LC  L  ++P  Y
Sbjct: 321 SWLLCCALSALNPLLY 336

>GPR88_MOUSE (Q9EPB7) Probable G-protein coupled receptor 88 (Striatum-specific|
           G-protein coupled receptor)
          Length = 384

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
 Frame = -1

Query: 219 YPAKPQPRERAWRNQRGKKTLLSLTLVRLCEM----TQSTVG*CKCSTYRSS---SMHIA 61
           +PA+PQP   A + +R ++ L  L+++ LC +    TQ  V     S +       +  A
Sbjct: 261 HPAQPQPLPAALQPRRAQRRLSGLSVLLLCCVFLLATQPLVWVSLASGFSLPVPWGVQAA 320

Query: 60  FFHLCLLLRGIDPCTY 13
            + LC  L  ++P  Y
Sbjct: 321 SWLLCCALSALNPLLY 336


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,240,744
Number of Sequences: 219361
Number of extensions: 861021
Number of successful extensions: 1932
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1932
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 1370455656
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)