| Clone Name | rbaet92e05 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | ELF1_DROME (P13002) Protein grainyhead (Protein grainy-head) (DN... | 30 | 2.3 | 2 | PSAG_HORVU (Q00327) Photosystem I reaction center subunit V, chl... | 28 | 6.7 |
|---|
>ELF1_DROME (P13002) Protein grainyhead (Protein grainy-head) (DNA-binding| protein ELF-1) (Element I-binding activity) (Transcription factor NTF-1) Length = 1333 Score = 29.6 bits (65), Expect = 2.3 Identities = 17/54 (31%), Positives = 23/54 (42%) Frame = +1 Query: 19 PSHIHTYILMMVHHQRIQN**KHGGLQQQSRSGRHAGRQGRRTDQPKKGGSYPL 180 P T +L VHH + Q + QQQ + H +Q D GG+ PL Sbjct: 733 PPPATTTVLTSVHHHQQQQQQQQQHQQQQQQQQHHQQQQHHSQDGKSNGGATPL 786
>PSAG_HORVU (Q00327) Photosystem I reaction center subunit V, chloroplast| precursor (PSI-G) (Photosystem I 9 kDa protein) Length = 143 Score = 28.1 bits (61), Expect = 6.7 Identities = 10/10 (100%), Positives = 10/10 (100%) Frame = -1 Query: 182 SNGYDPPFFG 153 SNGYDPPFFG Sbjct: 134 SNGYDPPFFG 143 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 22,996,066 Number of Sequences: 219361 Number of extensions: 325794 Number of successful extensions: 879 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 858 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 878 length of database: 80,573,946 effective HSP length: 36 effective length of database: 72,676,950 effective search space used: 1744246800 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)