ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet92d04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY106663.1| Zea mays PCO117644 mRNA sequence Length = 1461 Score = 311 bits (157), Expect = 1e-81 Identities = 256/289 (88%) Strand = Plus / Minus Query: 167 tcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagcttcagc 226 |||| |||| ||||| |||| |||||||| ||||||||| |||||||||||||||||||| Sbjct: 1089 tctttatgcggctacagctagaggtctttggctggtctttattcctttgatagcttcagc 1030 Query: 227 gtagtctttagccccgaaaaccgcagaaccagcaacaagagcattcgcgccagcttcaat 286 ||||||| |||||| ||||| |||||||| || |||| ||||| |||||||||||||| Sbjct: 1029 gtagtctggagccccaaaaactgcagaacctgcgacaatggcatttgcgccagcttcaat 970 Query: 287 gaccttgtaggcatttttgggactgactccaccatcaacctcaatccaggggttcactcc 346 ||||||||||||||||| |||| || |||||||||||||||||||||||||||||||| Sbjct: 969 aaccttgtaggcatttttcggaccaacaccaccatcaacctcaatccaggggttcactcc 910 Query: 347 cttctcttcgcataattttctcaaatcagcaattttctttacttgactctcgataaagct 406 ||||||| | ||||| |||||| || |||||||||||||||||||||||||||||||| Sbjct: 909 cttctctgcacataaccttctcagttctgcaattttctttacttgactctcgataaagct 850 Query: 407 ctgcccaccaaacccaggattgactgacataatcaataccagatcaaca 455 ||| ||||||||||||||||| || |||||||||| ||||| |||||| Sbjct: 849 ctggccaccaaacccaggattcacagacataatcagcaccaggtcaaca 801
>ref|XM_470294.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1340 Score = 281 bits (142), Expect = 1e-72 Identities = 250/286 (87%) Strand = Plus / Minus Query: 170 tcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagcttcagcgta 229 |||||||| ||| || |||||| ||| ||||||||| ||||| ||||||||||| || || Sbjct: 918 tcatgctggtacagccacaggtttttggctggtcttgattcccttgatagcttctgcata 859 Query: 230 gtctttagccccgaaaaccgcagaaccagcaacaagagcattcgcgccagcttcaatgac 289 |||| |||||||||||| || ||||||||||||| || || || |||||||||||||| Sbjct: 858 gtctggagccccgaaaacggctgaaccagcaacaatggcgttggccccagcttcaatgac 799 Query: 290 cttgtaggcatttttgggactgactccaccatcaacctcaatccaggggttcactccctt 349 ||||||||| |||||||||| ||||||||||||||||||||||| ||||| |||||||| Sbjct: 798 cttgtaggcgtttttgggaccaactccaccatcaacctcaatccaagggtttactccctt 739 Query: 350 ctcttcgcataattttctcaaatcagcaattttctttacttgactctcgataaagctctg 409 |||| | |||||| ||||||| || ||||| ||||| ||||| || || ||||||||||| Sbjct: 738 ctctgcacataatcttctcaactctgcaatcttcttcacttggctttcaataaagctctg 679 Query: 410 cccaccaaacccaggattgactgacataatcaataccagatcaaca 455 |||||||||||||||||| || |||||||||||||| ||||||||| Sbjct: 678 cccaccaaacccaggattcaccgacataatcaatactagatcaaca 633
>dbj|AK099215.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013084F18, full insert sequence Length = 1122 Score = 281 bits (142), Expect = 1e-72 Identities = 250/286 (87%) Strand = Plus / Minus Query: 170 tcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagcttcagcgta 229 |||||||| ||| || |||||| ||| ||||||||| ||||| ||||||||||| || || Sbjct: 874 tcatgctggtacagccacaggtttttggctggtcttgattcccttgatagcttctgcata 815 Query: 230 gtctttagccccgaaaaccgcagaaccagcaacaagagcattcgcgccagcttcaatgac 289 |||| |||||||||||| || ||||||||||||| || || || |||||||||||||| Sbjct: 814 gtctggagccccgaaaacggctgaaccagcaacaatggcgttggccccagcttcaatgac 755 Query: 290 cttgtaggcatttttgggactgactccaccatcaacctcaatccaggggttcactccctt 349 ||||||||| |||||||||| ||||||||||||||||||||||| ||||| |||||||| Sbjct: 754 cttgtaggcgtttttgggaccaactccaccatcaacctcaatccaagggtttactccctt 695 Query: 350 ctcttcgcataattttctcaaatcagcaattttctttacttgactctcgataaagctctg 409 |||| | |||||| ||||||| || ||||| ||||| ||||| || || ||||||||||| Sbjct: 694 ctctgcacataatcttctcaactctgcaatcttcttcacttggctttcaataaagctctg 635 Query: 410 cccaccaaacccaggattgactgacataatcaataccagatcaaca 455 |||||||||||||||||| || |||||||||||||| ||||||||| Sbjct: 634 cccaccaaacccaggattcaccgacataatcaatactagatcaaca 589
>dbj|AK066306.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013061C21, full insert sequence Length = 1276 Score = 281 bits (142), Expect = 1e-72 Identities = 250/286 (87%) Strand = Plus / Minus Query: 170 tcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagcttcagcgta 229 |||||||| ||| || |||||| ||| ||||||||| ||||| ||||||||||| || || Sbjct: 907 tcatgctggtacagccacaggtttttggctggtcttgattcccttgatagcttctgcata 848 Query: 230 gtctttagccccgaaaaccgcagaaccagcaacaagagcattcgcgccagcttcaatgac 289 |||| |||||||||||| || ||||||||||||| || || || |||||||||||||| Sbjct: 847 gtctggagccccgaaaacggctgaaccagcaacaatggcgttggccccagcttcaatgac 788 Query: 290 cttgtaggcatttttgggactgactccaccatcaacctcaatccaggggttcactccctt 349 ||||||||| |||||||||| ||||||||||||||||||||||| ||||| |||||||| Sbjct: 787 cttgtaggcgtttttgggaccaactccaccatcaacctcaatccaagggtttactccctt 728 Query: 350 ctcttcgcataattttctcaaatcagcaattttctttacttgactctcgataaagctctg 409 |||| | |||||| ||||||| || ||||| ||||| ||||| || || ||||||||||| Sbjct: 727 ctctgcacataatcttctcaactctgcaatcttcttcacttggctttcaataaagctctg 668 Query: 410 cccaccaaacccaggattgactgacataatcaataccagatcaaca 455 |||||||||||||||||| || |||||||||||||| ||||||||| Sbjct: 667 cccaccaaacccaggattcaccgacataatcaatactagatcaaca 622
>dbj|AK061772.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-C12, full insert sequence Length = 1113 Score = 281 bits (142), Expect = 1e-72 Identities = 250/286 (87%) Strand = Plus / Minus Query: 170 tcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagcttcagcgta 229 |||||||| ||| || |||||| ||| ||||||||| ||||| ||||||||||| || || Sbjct: 890 tcatgctggtacagccacaggtttttggctggtcttgattcccttgatagcttctgcata 831 Query: 230 gtctttagccccgaaaaccgcagaaccagcaacaagagcattcgcgccagcttcaatgac 289 |||| |||||||||||| || ||||||||||||| || || || |||||||||||||| Sbjct: 830 gtctggagccccgaaaacggctgaaccagcaacaatggcgttggccccagcttcaatgac 771 Query: 290 cttgtaggcatttttgggactgactccaccatcaacctcaatccaggggttcactccctt 349 ||||||||| |||||||||| ||||||||||||||||||||||| ||||| |||||||| Sbjct: 770 cttgtaggcgtttttgggaccaactccaccatcaacctcaatccaagggtttactccctt 711 Query: 350 ctcttcgcataattttctcaaatcagcaattttctttacttgactctcgataaagctctg 409 |||| | |||||| ||||||| || ||||| ||||| ||||| || || ||||||||||| Sbjct: 710 ctctgcacataatcttctcaactctgcaatcttcttcacttggctttcaataaagctctg 651 Query: 410 cccaccaaacccaggattgactgacataatcaataccagatcaaca 455 |||||||||||||||||| || |||||||||||||| ||||||||| Sbjct: 650 cccaccaaacccaggattcaccgacataatcaatactagatcaaca 605
>gb|AF047444.1|AF047444 Oryza sativa ribulose-5-phosphate-3-epimerase (RPE) mRNA, complete cds Length = 1050 Score = 268 bits (135), Expect = 1e-68 Identities = 251/287 (87%), Gaps = 2/287 (0%) Strand = Plus / Minus Query: 170 tcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagcttcagcgta 229 |||||||| ||| || |||||||||||||||||||| ||||| ||||||||||| || || Sbjct: 918 tcatgctggtacagccacaggtcttttgctggtcttgattcccttgatagcttctgcata 859 Query: 230 gtctttagccccgaaaaccgcagaaccagcaacaagagcattcgcgccagcttcaatgac 289 |||| |||||||||||| || ||||||||||||| || || || |||||||||||||| Sbjct: 858 gtctggagccccgaaaacggctgaaccagcaacaatggcgttggccccagcttcaatgac 799 Query: 290 cttgtaggcatttttgggactgactccaccatcaacctcaatccaggggttcactccctt 349 ||||||||| |||||||||| ||||||||||||||||||||||| ||||| |||||||| Sbjct: 798 cttgtaggcgtttttgggaccaactccaccatcaacctcaatccaagggtttactccctt 739 Query: 350 ctct-tcgcataattttctcaaatcagcaattttctttacttgactctcgataaagctct 408 |||| | ||| | |||||||| || ||||| ||||| ||||| || || |||||||||| Sbjct: 738 ctctgccacat-actttctcaactctgcaatcttcttcacttggctttcaataaagctct 680 Query: 409 gcccaccaaacccaggattgactgacataatcaataccagatcaaca 455 ||||||||||||||||||| || |||||||||||||| ||||||||| Sbjct: 679 gcccaccaaacccaggattcaccgacataatcaatactagatcaaca 633
>emb|BX832544.1|CNS0A11A Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH7ZB09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1331 Score = 172 bits (87), Expect = 6e-40 Identities = 219/263 (83%) Strand = Plus / Minus Query: 189 ggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaacc 248 |||| |||||||| |||||||||||| |||||||| |||||||| ||||| || || || Sbjct: 1068 ggtcgtttgctggccttaattccttttatagcttctgcgtagtccttagctccaaataca 1009 Query: 249 gcagaaccagcaacaagagcattcgcgccagcttcaatgaccttgtaggcatttttggga 308 || || ||||| || |||||||| || ||||| |||||||||||||| ||||| ||| Sbjct: 1008 gctgatccagccactagagcatttgctccagcctcaatgaccttgtacgcattcgctgga 949 Query: 309 ctgactccaccatcaacctcaatccaggggttcactcccttctcttcgcataattttctc 368 |||| ||||||||||| |||||||| ||||| |||||||||||| | || | ||| ||| Sbjct: 948 gtgacaccaccatcaacttcaatccatgggtttactcccttctctgcacacattttcctc 889 Query: 369 aaatcagcaattttctttacttgactctcgataaagctctgcccaccaaacccaggattg 428 || || | |||||||||||||| || || ||||||||||| |||||||| ||||| ||| Sbjct: 888 aagtccgagattttctttacttggctttcaataaagctctgtccaccaaaaccagggttg 829 Query: 429 actgacataatcaataccagatc 451 || ||||| ||||| |||||||| Sbjct: 828 accgacatgatcaagaccagatc 806
>gb|AF015274.1|AF015274 Arabidopsis thaliana ribulose-5-phosphate-3-epimerase mRNA, complete cds Length = 1259 Score = 172 bits (87), Expect = 6e-40 Identities = 219/263 (83%) Strand = Plus / Minus Query: 189 ggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaacc 248 |||| |||||||| |||||||||||| |||||||| |||||||| ||||| || || || Sbjct: 932 ggtcgtttgctggccttaattccttttatagcttctgcgtagtccttagctccaaataca 873 Query: 249 gcagaaccagcaacaagagcattcgcgccagcttcaatgaccttgtaggcatttttggga 308 || |||||||| || |||||||| || ||||| ||||| |||||||| ||||| ||| Sbjct: 872 gctgaaccagccactagagcatttgctccagcctcaataaccttgtacgcattcgctgga 813 Query: 309 ctgactccaccatcaacctcaatccaggggttcactcccttctcttcgcataattttctc 368 |||| ||||||||||| |||||||| ||||| |||||||||||| | || | ||| ||| Sbjct: 812 gtgacaccaccatcaacttcaatccatgggtttactcccttctctgcacacattttcctc 753 Query: 369 aaatcagcaattttctttacttgactctcgataaagctctgcccaccaaacccaggattg 428 || || | |||||||||||||| || || ||||||||||| |||||||| ||||| ||| Sbjct: 752 aagtccgagattttctttacttggctttcaataaagctctgtccaccaaaaccagggttg 693 Query: 429 actgacataatcaataccagatc 451 || ||||| ||||| |||||||| Sbjct: 692 accgacatgatcaagaccagatc 670
>ref|NM_125534.2| Arabidopsis thaliana RPE; ribulose-phosphate 3-epimerase AT5G61410 (RPE) transcript variant AT5G61410.2 mRNA, complete cds Length = 1271 Score = 165 bits (83), Expect = 2e-37 Identities = 218/263 (82%) Strand = Plus / Minus Query: 189 ggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaacc 248 |||| |||||||| |||||||||||| |||||||| |||||||| ||||| || || || Sbjct: 965 ggtcgtttgctggccttaattccttttatagcttctgcgtagtccttagctccaaataca 906 Query: 249 gcagaaccagcaacaagagcattcgcgccagcttcaatgaccttgtaggcatttttggga 308 || || ||||| || |||||||| || ||||| ||||| |||||||| ||||| ||| Sbjct: 905 gctgatccagccactagagcatttgctccagcctcaataaccttgtacgcattcgctgga 846 Query: 309 ctgactccaccatcaacctcaatccaggggttcactcccttctcttcgcataattttctc 368 |||| ||||||||||| |||||||| ||||| |||||||||||| | || | ||| ||| Sbjct: 845 gtgacaccaccatcaacttcaatccatgggtttactcccttctctgcacacattttcctc 786 Query: 369 aaatcagcaattttctttacttgactctcgataaagctctgcccaccaaacccaggattg 428 || || | |||||||||||||| || || ||||||||||| |||||||| ||||| ||| Sbjct: 785 aagtccgagattttctttacttggctttcaataaagctctgtccaccaaaaccagggttg 726 Query: 429 actgacataatcaataccagatc 451 || ||||| ||||| |||||||| Sbjct: 725 accgacatgatcaagaccagatc 703
>ref|NM_180909.2| Arabidopsis thaliana RPE; ribulose-phosphate 3-epimerase AT5G61410 (RPE) transcript variant AT5G61410.1 mRNA, complete cds Length = 1408 Score = 165 bits (83), Expect = 2e-37 Identities = 218/263 (82%) Strand = Plus / Minus Query: 189 ggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaacc 248 |||| |||||||| |||||||||||| |||||||| |||||||| ||||| || || || Sbjct: 1096 ggtcgtttgctggccttaattccttttatagcttctgcgtagtccttagctccaaataca 1037 Query: 249 gcagaaccagcaacaagagcattcgcgccagcttcaatgaccttgtaggcatttttggga 308 || || ||||| || |||||||| || ||||| ||||| |||||||| ||||| ||| Sbjct: 1036 gctgatccagccactagagcatttgctccagcctcaataaccttgtacgcattcgctgga 977 Query: 309 ctgactccaccatcaacctcaatccaggggttcactcccttctcttcgcataattttctc 368 |||| ||||||||||| |||||||| ||||| |||||||||||| | || | ||| ||| Sbjct: 976 gtgacaccaccatcaacttcaatccatgggtttactcccttctctgcacacattttcctc 917 Query: 369 aaatcagcaattttctttacttgactctcgataaagctctgcccaccaaacccaggattg 428 || || | |||||||||||||| || || ||||||||||| |||||||| ||||| ||| Sbjct: 916 aagtccgagattttctttacttggctttcaataaagctctgtccaccaaaaccagggttg 857 Query: 429 actgacataatcaataccagatc 451 || ||||| ||||| |||||||| Sbjct: 856 accgacatgatcaagaccagatc 834
>gb|AY091381.1| Arabidopsis thaliana putative ribulose-5-phosphate-3-epimerase (At5g61410) mRNA, complete cds Length = 877 Score = 165 bits (83), Expect = 2e-37 Identities = 218/263 (82%) Strand = Plus / Minus Query: 189 ggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaacc 248 |||| |||||||| |||||||||||| |||||||| |||||||| ||||| || || || Sbjct: 827 ggtcgtttgctggccttaattccttttatagcttctgcgtagtccttagctccaaataca 768 Query: 249 gcagaaccagcaacaagagcattcgcgccagcttcaatgaccttgtaggcatttttggga 308 || || ||||| || |||||||| || ||||| ||||| |||||||| ||||| ||| Sbjct: 767 gctgatccagccactagagcatttgctccagcctcaataaccttgtacgcattcgctgga 708 Query: 309 ctgactccaccatcaacctcaatccaggggttcactcccttctcttcgcataattttctc 368 |||| ||||||||||| |||||||| ||||| |||||||||||| | || | ||| ||| Sbjct: 707 gtgacaccaccatcaacttcaatccatgggtttactcccttctctgcacacattttcctc 648 Query: 369 aaatcagcaattttctttacttgactctcgataaagctctgcccaccaaacccaggattg 428 || || | |||||||||||||| || || ||||||||||| |||||||| ||||| ||| Sbjct: 647 aagtccgagattttctttacttggctttcaataaagctctgtccaccaaaaccagggttg 588 Query: 429 actgacataatcaataccagatc 451 || ||||| ||||| |||||||| Sbjct: 587 accgacatgatcaagaccagatc 565
>gb|AY045855.1| Arabidopsis thaliana putative ribulose-5-phosphate-3-epimerase (At5g61410) mRNA, complete cds Length = 1280 Score = 165 bits (83), Expect = 2e-37 Identities = 218/263 (82%) Strand = Plus / Minus Query: 189 ggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaacc 248 |||| |||||||| |||||||||||| |||||||| |||||||| ||||| || || || Sbjct: 959 ggtcgtttgctggccttaattccttttatagcttctgcgtagtccttagctccaaataca 900 Query: 249 gcagaaccagcaacaagagcattcgcgccagcttcaatgaccttgtaggcatttttggga 308 || || ||||| || |||||||| || ||||| ||||| |||||||| ||||| ||| Sbjct: 899 gctgatccagccactagagcatttgctccagcctcaataaccttgtacgcattcgctgga 840 Query: 309 ctgactccaccatcaacctcaatccaggggttcactcccttctcttcgcataattttctc 368 |||| ||||||||||| |||||||| ||||| |||||||||||| | || | ||| ||| Sbjct: 839 gtgacaccaccatcaacttcaatccatgggtttactcccttctctgcacacattttcctc 780 Query: 369 aaatcagcaattttctttacttgactctcgataaagctctgcccaccaaacccaggattg 428 || || | |||||||||||||| || || ||||||||||| |||||||| ||||| ||| Sbjct: 779 aagtccgagattttctttacttggctttcaataaagctctgtccaccaaaaccagggttg 720 Query: 429 actgacataatcaataccagatc 451 || ||||| ||||| |||||||| Sbjct: 719 accgacatgatcaagaccagatc 697
>emb|BX830111.1|CNS0A1DI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB60ZB12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1313 Score = 165 bits (83), Expect = 2e-37 Identities = 218/263 (82%) Strand = Plus / Minus Query: 189 ggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaacc 248 |||| |||||||| |||||||||||| |||||||| |||||||| ||||| || || || Sbjct: 1056 ggtcgtttgctggccttaattccttttatagcttctgcgtagtccttagctccaaataca 997 Query: 249 gcagaaccagcaacaagagcattcgcgccagcttcaatgaccttgtaggcatttttggga 308 || || ||||| || |||||||| || ||||| ||||| |||||||| ||||| ||| Sbjct: 996 gctgatccagccactagagcatttgctccagcctcaataaccttgtacgcattcgctgga 937 Query: 309 ctgactccaccatcaacctcaatccaggggttcactcccttctcttcgcataattttctc 368 |||| ||||||||||| |||||||| ||||| |||||||||||| | || | ||| ||| Sbjct: 936 gtgacaccaccatcaacttcaatccatgggtttactcccttctctgcacacattttcctc 877 Query: 369 aaatcagcaattttctttacttgactctcgataaagctctgcccaccaaacccaggattg 428 || || | |||||||||||||| || || ||||||||||| |||||||| ||||| ||| Sbjct: 876 aagtccgagattttctttacttggctttcaataaagctctgtccaccaaaaccagggttg 817 Query: 429 actgacataatcaataccagatc 451 || ||||| ||||| |||||||| Sbjct: 816 accgacatgatcaagaccagatc 794
>emb|BX832763.1|CNS0A101 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH9ZD09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1343 Score = 165 bits (83), Expect = 2e-37 Identities = 218/263 (82%) Strand = Plus / Minus Query: 189 ggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaacc 248 |||| |||||||| |||||||||||| |||||||| |||||||| ||||| || || || Sbjct: 1067 ggtcgtttgctggccttaattccttttatagcttctgcgtagtccttagctccaaataca 1008 Query: 249 gcagaaccagcaacaagagcattcgcgccagcttcaatgaccttgtaggcatttttggga 308 || || ||||| || |||||||| || ||||| ||||| |||||||| ||||| ||| Sbjct: 1007 gctgatccagccactagagcatttgctccagcctcaataaccttgtacgcattcgctgga 948 Query: 309 ctgactccaccatcaacctcaatccaggggttcactcccttctcttcgcataattttctc 368 |||| ||||||||||| |||||||| ||||| |||||||||||| | || | ||| ||| Sbjct: 947 gtgacaccaccatcaacttcaatccatgggtttactcccttctctgcacacattttcctc 888 Query: 369 aaatcagcaattttctttacttgactctcgataaagctctgcccaccaaacccaggattg 428 || || | |||||||||||||| || || ||||||||||| |||||||| ||||| ||| Sbjct: 887 aagtccgagattttctttacttggctttcaataaagctctgtccaccaaaaccagggttg 828 Query: 429 actgacataatcaataccagatc 451 || ||||| ||||| |||||||| Sbjct: 827 accgacatgatcaagaccagatc 805
>emb|BX832214.1|CNS0A123 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH59ZF11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1362 Score = 165 bits (83), Expect = 2e-37 Identities = 218/263 (82%) Strand = Plus / Minus Query: 189 ggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaacc 248 |||| |||||||| |||||||||||| |||||||| |||||||| ||||| || || || Sbjct: 1096 ggtcgtttgctggccttaattccttttatagcttctgcgtagtccttagctccaaataca 1037 Query: 249 gcagaaccagcaacaagagcattcgcgccagcttcaatgaccttgtaggcatttttggga 308 || || ||||| || |||||||| || ||||| ||||| |||||||| ||||| ||| Sbjct: 1036 gctgatccagccactagagcatttgctccagcctcaataaccttgtacgcattcgctgga 977 Query: 309 ctgactccaccatcaacctcaatccaggggttcactcccttctcttcgcataattttctc 368 |||| ||||||||||| |||||||| ||||| |||||||||||| | || | ||| ||| Sbjct: 976 gtgacaccaccatcaacttcaatccatgggtttactcccttctctgcacacattttcctc 917 Query: 369 aaatcagcaattttctttacttgactctcgataaagctctgcccaccaaacccaggattg 428 || || | |||||||||||||| || || ||||||||||| |||||||| ||||| ||| Sbjct: 916 aagtccgagattttctttacttggctttcaataaagctctgtccaccaaaaccagggttg 857 Query: 429 actgacataatcaataccagatc 451 || ||||| ||||| |||||||| Sbjct: 856 accgacatgatcaagaccagatc 834
>emb|Z50098.1|STPPEPIMR S.tuberosum mRNA for pentose-5-phosphate-3-epimerase Length = 1055 Score = 161 bits (81), Expect = 2e-36 Identities = 222/269 (82%) Strand = Plus / Minus Query: 187 caggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaa 246 |||| |||||||| ||||| || ||||| ||||||||||| || || ||| || || | Sbjct: 828 caggccttttgctcgtcttgatccctttaatagcttcagcataatcaggagctccaaaga 769 Query: 247 ccgcagaaccagcaacaagagcattcgcgccagcttcaatgaccttgtaggcatttttgg 306 | ||||||||||| || | ||||| || |||||||||||||||||||| |||||||||| Sbjct: 768 cagcagaaccagctaccaaggcattggctccagcttcaatgaccttgtaagcatttttgg 709 Query: 307 gactgactccaccatcaacctcaatccaggggttcactcccttctcttcgcataattttc 366 ||| |||||||||||||| |||||||| ||||| | |||| |||| |||| | ||||| Sbjct: 708 gaccaactccaccatcaacttcaatccaagggtttaatcccctctcagcgcagatttttc 649 Query: 367 tcaaatcagcaattttctttacttgactctcgataaagctctgcccaccaaacccaggat 426 |||| || | |||||||| || |||||||| || |||||||| || ||||| ||||| | Sbjct: 648 tcaagtccgagattttcttgacctgactctcaatgaagctctgtcccccaaatccagggt 589 Query: 427 tgactgacataatcaataccagatcaaca 455 | || ||||||||||| |||||||||||| Sbjct: 588 ttacagacataatcaacaccagatcaaca 560
>gb|BT014306.1| Lycopersicon esculentum clone 133557F, mRNA sequence Length = 1257 Score = 153 bits (77), Expect = 6e-34 Identities = 221/269 (82%) Strand = Plus / Minus Query: 187 caggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaa 246 |||| |||||||| ||||| || ||||| ||||||||||| || || ||| || || | Sbjct: 974 caggccttttgcttgtcttgatccctttaatagcttcagcataatcaggagctccaaaga 915 Query: 247 ccgcagaaccagcaacaagagcattcgcgccagcttcaatgaccttgtaggcatttttgg 306 | |||||||| || || | ||||| || || ||||||||||||||||| |||||||||| Sbjct: 914 cagcagaacctgctaccaaggcattggctccggcttcaatgaccttgtaagcatttttgg 855 Query: 307 gactgactccaccatcaacctcaatccaggggttcactcccttctcttcgcataattttc 366 ||| |||||||||||||| |||||||| ||||| ||||||||||| | |||| ||||| Sbjct: 854 gaccaactccaccatcaacttcaatccaagggtttactcccttctcagcacatatttttc 795 Query: 367 tcaaatcagcaattttctttacttgactctcgataaagctctgcccaccaaacccaggat 426 |||| || | |||||||| || |||||||| || |||||||| || ||||| ||||| | Sbjct: 794 tcaagtctgagattttcttgacctgactctcaatgaagctctgtcccccaaatccagggt 735 Query: 427 tgactgacataatcaataccagatcaaca 455 | || |||||||||| |||||||||||| Sbjct: 734 ttacagacataatcagcaccagatcaaca 706
>gb|AF070943.1| Expression vector pFL506 for Spinacia oleracea chloroplast ribulose-phosphate 3-epimerase mature form Length = 849 Score = 149 bits (75), Expect = 9e-33 Identities = 216/263 (82%) Strand = Plus / Minus Query: 192 cttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaaccgca 251 |||||||||| ||| || ||||| ||||||||||| || |||||||| || || || ||| Sbjct: 789 cttttgctggccttgatcccttttatagcttcagcataatctttagctccaaagactgca 730 Query: 252 gaaccagcaacaagagcattcgcgccagcttcaatgaccttgtaggcatttttgggactg 311 |||||||| || | |||||| || ||||| |||||||||||||| |||||| ||| | Sbjct: 729 gaaccagcgactaaagcattggctccagcctcaatgaccttgtatgcatttgctggagta 670 Query: 312 actccaccatcaacctcaatccaggggttcactcccttctcttcgcataattttctcaaa 371 ||||||||||| ||||||||||| |||||||| ||||||||| | || | |||||||| | Sbjct: 669 actccaccatctacctcaatccacgggttcacccccttctctacacacatttttctcaga 610 Query: 372 tcagcaattttctttacttgactctcgataaagctctgcccaccaaacccaggattgact 431 || | |||||||| ||||| ||||| || ||||| || || || || ||||| || || Sbjct: 609 tctgagattttcttgacttggctctcaatgaagctttgtccgccgaagccagggtttaca 550 Query: 432 gacataatcaataccagatcaac 454 |||||||| || ||||||||||| Sbjct: 549 gacataattaagaccagatcaac 527
>gb|AF070942.1| Expression vector pFL505 for Spinacia oleracea chloroplast ribulose-phosphate 3-epimerase transit form Length = 993 Score = 149 bits (75), Expect = 9e-33 Identities = 216/263 (82%) Strand = Plus / Minus Query: 192 cttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaaccgca 251 |||||||||| ||| || ||||| ||||||||||| || |||||||| || || || ||| Sbjct: 933 cttttgctggccttgatcccttttatagcttcagcataatctttagctccaaagactgca 874 Query: 252 gaaccagcaacaagagcattcgcgccagcttcaatgaccttgtaggcatttttgggactg 311 |||||||| || | |||||| || ||||| |||||||||||||| |||||| ||| | Sbjct: 873 gaaccagcgactaaagcattggctccagcctcaatgaccttgtatgcatttgctggagta 814 Query: 312 actccaccatcaacctcaatccaggggttcactcccttctcttcgcataattttctcaaa 371 ||||||||||| ||||||||||| |||||||| ||||||||| | || | |||||||| | Sbjct: 813 actccaccatctacctcaatccacgggttcacccccttctctacacacatttttctcaga 754 Query: 372 tcagcaattttctttacttgactctcgataaagctctgcccaccaaacccaggattgact 431 || | |||||||| ||||| ||||| || ||||| || || || || ||||| || || Sbjct: 753 tctgagattttcttgacttggctctcaatgaagctttgtccgccgaagccagggtttaca 694 Query: 432 gacataatcaataccagatcaac 454 |||||||| || ||||||||||| Sbjct: 693 gacataattaagaccagatcaac 671
>gb|AF070941.1| Spinacia oleracea ribulose-phosphate 3-epimerase (RPE) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1230 Score = 149 bits (75), Expect = 9e-33 Identities = 216/263 (82%) Strand = Plus / Minus Query: 192 cttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaaccgca 251 |||||||||| ||| || ||||| ||||||||||| || |||||||| || || || ||| Sbjct: 898 cttttgctggccttgatcccttttatagcttcagcataatctttagctccaaagactgca 839 Query: 252 gaaccagcaacaagagcattcgcgccagcttcaatgaccttgtaggcatttttgggactg 311 |||||||| || | |||||| || ||||| |||||||||||||| |||||| ||| | Sbjct: 838 gaaccagcgactaaagcattggctccagcctcaatgaccttgtatgcatttgctggagta 779 Query: 312 actccaccatcaacctcaatccaggggttcactcccttctcttcgcataattttctcaaa 371 ||||||||||| ||||||||||| |||||||| ||||||||| | || | |||||||| | Sbjct: 778 actccaccatctacctcaatccacgggttcacccccttctctacacacatttttctcaga 719 Query: 372 tcagcaattttctttacttgactctcgataaagctctgcccaccaaacccaggattgact 431 || | |||||||| ||||| ||||| || ||||| || || || || ||||| || || Sbjct: 718 tctgagattttcttgacttggctctcaatgaagctttgtccgccgaagccagggtttaca 659 Query: 432 gacataatcaataccagatcaac 454 |||||||| || ||||||||||| Sbjct: 658 gacataattaagaccagatcaac 636
>gb|L42328.1|SPIR5P3E Spinacia oleracea nuclear-encoded chloroplast ribulose-5-phosphate 3-epimerase mRNA, complete cds Length = 1198 Score = 149 bits (75), Expect = 9e-33 Identities = 216/263 (82%) Strand = Plus / Minus Query: 192 cttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaaccgca 251 |||||||||| ||| || ||||| ||||||||||| || |||||||| || || || ||| Sbjct: 890 cttttgctggccttgatcccttttatagcttcagcataatctttagctccaaagactgca 831 Query: 252 gaaccagcaacaagagcattcgcgccagcttcaatgaccttgtaggcatttttgggactg 311 |||||||| || | |||||| || ||||| |||||||||||||| |||||| ||| | Sbjct: 830 gaaccagcgactaaagcattggctccagcctcaatgaccttgtatgcatttgctggagta 771 Query: 312 actccaccatcaacctcaatccaggggttcactcccttctcttcgcataattttctcaaa 371 ||||||||||| ||||||||||| |||||||| ||||||||| | || | |||||||| | Sbjct: 770 actccaccatctacctcaatccacgggttcacccccttctctacacacatttttctcaga 711 Query: 372 tcagcaattttctttacttgactctcgataaagctctgcccaccaaacccaggattgact 431 || | |||||||| ||||| ||||| || ||||| || || || || ||||| || || Sbjct: 710 tctgagattttcttgacttggctctcaatgaagctttgtccgccgaagccagggtttaca 651 Query: 432 gacataatcaataccagatcaac 454 |||||||| || ||||||||||| Sbjct: 650 gacataattaagaccagatcaac 628
>gb|AF369887.1| Pisum sativum ribulose-5-phosphate-3-epimerase mRNA, complete cds Length = 1156 Score = 143 bits (72), Expect = 6e-31 Identities = 219/268 (81%) Strand = Plus / Minus Query: 187 caggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaa 246 ||||||||||||| | || || ||||| ||||||||||| || |||||||| || || | Sbjct: 852 caggtcttttgctagctttgatcccttttatagcttcagcataatctttagctccaaata 793 Query: 247 ccgcagaaccagcaacaagagcattcgcgccagcttcaatgaccttgtaggcatttttgg 306 | |||||||||||||| || ||||| || ||||| ||||| |||||||| |||||| | Sbjct: 792 cagcagaaccagcaactagtgcattagctccagcctcaatcaccttgtaagcatttgctg 733 Query: 307 gactgactccaccatcaacctcaatccaggggttcactcccttctcttcgcataattttc 366 | | || |||||||| || |||||||| || || || |||||||| |||| ||| ||| Sbjct: 732 gggtaaccccaccatcgacttcaatccatggattgacacccttctccacgcacaatcttc 673 Query: 367 tcaaatcagcaattttctttacttgactctcgataaagctctgcccaccaaacccaggat 426 |||| ||||||||||||||||| |||||||| ||||| || || |||||||| ||||| | Sbjct: 672 tcaactcagcaattttctttacgtgactctcaataaaactttggccaccaaagccagggt 613 Query: 427 tgactgacataatcaataccagatcaac 454 | || |||||||| || |||| |||||| Sbjct: 612 ttacagacataattaagaccaaatcaac 585
>emb|BX829553.1|CNS0A1DD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB1ZH01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1311 Score = 141 bits (71), Expect = 2e-30 Identities = 215/263 (81%) Strand = Plus / Minus Query: 189 ggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaacc 248 |||| ||||| || |||||||||||| |||||||| |||||||| ||||| || || || Sbjct: 1056 ggtcgtttgcaggccttaattccttttatagcttctgcgtagtccttagctccaaataca 997 Query: 249 gcagaaccagcaacaagagcattcgcgccagcttcaatgaccttgtaggcatttttggga 308 || || ||||| || |||||||| || ||||| ||||| |||||||| ||||| ||| Sbjct: 996 gctgatccagccactagagcatttgctccagcctcaataaccttgtacgcattcgctgga 937 Query: 309 ctgactccaccatcaacctcaatccaggggttcactcccttctcttcgcataattttctc 368 | || ||||||||||| ||||| || ||||| |||||||||||| | || | ||| ||| Sbjct: 936 gtcacaccaccatcaacttcaattcatgggtttactcccttctctgcacacattttcctc 877 Query: 369 aaatcagcaattttctttacttgactctcgataaagctctgcccaccaaacccaggattg 428 || || | |||||||||||||| || || ||||||||||| |||||||| ||||| ||| Sbjct: 876 aagtccgagattttctttacttggctttcaataaagctctgtccaccaaaaccagggttg 817 Query: 429 actgacataatcaataccagatc 451 || ||||| ||||| |||||||| Sbjct: 816 accgacatgatcaagaccagatc 794
>emb|BX832443.1|CNS0A0ZZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH73ZD01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1325 Score = 117 bits (59), Expect = 3e-23 Identities = 212/263 (80%) Strand = Plus / Minus Query: 189 ggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaacc 248 |||| |||||||| |||||||||||| ||||| || |||||||| ||||| || || || Sbjct: 1056 ggtcgtttgctggccttaattccttttatagcgtcggcgtagtccttagcgccaaataca 997 Query: 249 gcagaaccagcaacaagagcattcgcgccagcttcaatgaccttgtaggcatttttggga 308 || || ||||| || |||||||| |||||||| |||||||| ||||| ||||| |||| Sbjct: 996 gcggatccagccacgagagcatttgcgccagcgtcaatgacgttgtacgcattcgcggga 937 Query: 309 ctgactccaccatcaacctcaatccaggggttcactcccttctcttcgcataattttctc 368 |||| |||||||||| |||||||| ||||| || |||||| || | || | ||| ||| Sbjct: 936 gtgacaccaccatcaaggtcaatccatgggtttacgcccttcgctgcacacattttcctc 877 Query: 369 aaatcagcaattttctttacttgactctcgataaagctctgcccaccaaacccaggattg 428 || | | |||||||| ||||| || || ||||||| ||| ||||||| ||||| ||| Sbjct: 876 aagttcgagattttcttcacttggctttcaataaagcgctgtgcaccaaaaccagggttg 817 Query: 429 actgacataatcaataccagatc 451 || ||||| ||||| |||||||| Sbjct: 816 accgacatgatcaagaccagatc 794
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 115 bits (58), Expect = 1e-22 Identities = 97/110 (88%) Strand = Plus / Minus Query: 346 ccttctcttcgcataattttctcaaatcagcaattttctttacttgactctcgataaagc 405 |||||||| | |||||| ||||||| || ||||| ||||| ||||| || || ||||||| Sbjct: 3698162 ccttctctgcacataatcttctcaactctgcaatcttcttcacttggctttcaataaagc 3698103 Query: 406 tctgcccaccaaacccaggattgactgacataatcaataccagatcaaca 455 |||||||||||||||||||||| || |||||||||||||| ||||||||| Sbjct: 3698102 tctgcccaccaaacccaggattcaccgacataatcaatactagatcaaca 3698053 Score = 85.7 bits (43), Expect = 1e-13 Identities = 58/63 (92%) Strand = Plus / Minus Query: 286 tgaccttgtaggcatttttgggactgactccaccatcaacctcaatccaggggttcactc 345 ||||||||||||| |||||||||| ||||||||||||||||||||||| ||||| |||| Sbjct: 3698293 tgaccttgtaggcgtttttgggaccaactccaccatcaacctcaatccaagggtttactc 3698234 Query: 346 cct 348 ||| Sbjct: 3698233 cct 3698231 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 236 agccccgaaaaccgcagaaccagcaacaagagcattcgcgccagcttcaatgacct 291 |||||||||||| || ||||||||||||| || || || |||||||||||||||| Sbjct: 3698462 agccccgaaaacggctgaaccagcaacaatggcgttggccccagcttcaatgacct 3698407 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gtgatacaacgtatggcttg 75 |||||||||||||||||||| Sbjct: 35475891 gtgatacaacgtatggcttg 35475910
>gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 genomic sequence, complete sequence Length = 160738 Score = 115 bits (58), Expect = 1e-22 Identities = 97/110 (88%) Strand = Plus / Plus Query: 346 ccttctcttcgcataattttctcaaatcagcaattttctttacttgactctcgataaagc 405 |||||||| | |||||| ||||||| || ||||| ||||| ||||| || || ||||||| Sbjct: 83215 ccttctctgcacataatcttctcaactctgcaatcttcttcacttggctttcaataaagc 83274 Query: 406 tctgcccaccaaacccaggattgactgacataatcaataccagatcaaca 455 |||||||||||||||||||||| || |||||||||||||| ||||||||| Sbjct: 83275 tctgcccaccaaacccaggattcaccgacataatcaatactagatcaaca 83324 Score = 85.7 bits (43), Expect = 1e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 286 tgaccttgtaggcatttttgggactgactccaccatcaacctcaatccaggggttcactc 345 ||||||||||||| |||||||||| ||||||||||||||||||||||| ||||| |||| Sbjct: 83084 tgaccttgtaggcgtttttgggaccaactccaccatcaacctcaatccaagggtttactc 83143 Query: 346 cct 348 ||| Sbjct: 83144 cct 83146 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 236 agccccgaaaaccgcagaaccagcaacaagagcattcgcgccagcttcaatgacct 291 |||||||||||| || ||||||||||||| || || || |||||||||||||||| Sbjct: 82915 agccccgaaaacggctgaaccagcaacaatggcgttggccccagcttcaatgacct 82970
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 115 bits (58), Expect = 1e-22 Identities = 97/110 (88%) Strand = Plus / Minus Query: 346 ccttctcttcgcataattttctcaaatcagcaattttctttacttgactctcgataaagc 405 |||||||| | |||||| ||||||| || ||||| ||||| ||||| || || ||||||| Sbjct: 3698273 ccttctctgcacataatcttctcaactctgcaatcttcttcacttggctttcaataaagc 3698214 Query: 406 tctgcccaccaaacccaggattgactgacataatcaataccagatcaaca 455 |||||||||||||||||||||| || |||||||||||||| ||||||||| Sbjct: 3698213 tctgcccaccaaacccaggattcaccgacataatcaatactagatcaaca 3698164 Score = 85.7 bits (43), Expect = 1e-13 Identities = 58/63 (92%) Strand = Plus / Minus Query: 286 tgaccttgtaggcatttttgggactgactccaccatcaacctcaatccaggggttcactc 345 ||||||||||||| |||||||||| ||||||||||||||||||||||| ||||| |||| Sbjct: 3698404 tgaccttgtaggcgtttttgggaccaactccaccatcaacctcaatccaagggtttactc 3698345 Query: 346 cct 348 ||| Sbjct: 3698344 cct 3698342 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 236 agccccgaaaaccgcagaaccagcaacaagagcattcgcgccagcttcaatgacct 291 |||||||||||| || ||||||||||||| || || || |||||||||||||||| Sbjct: 3698573 agccccgaaaacggctgaaccagcaacaatggcgttggccccagcttcaatgacct 3698518 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gtgatacaacgtatggcttg 75 |||||||||||||||||||| Sbjct: 35565963 gtgatacaacgtatggcttg 35565982
>dbj|AP004930.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT13G01, TM0093a, complete sequence Length = 42990 Score = 97.6 bits (49), Expect = 3e-17 Identities = 94/109 (86%) Strand = Plus / Minus Query: 346 ccttctcttcgcataattttctcaaatcagcaattttctttacttgactctcgataaagc 405 |||||||| |||||||| ||||||| |||| |||||||||||||||||| || ||||| | Sbjct: 3528 ccttctctgcgcataatcttctcaagtcagaaattttctttacttgactttcaataaaac 3469 Query: 406 tctgcccaccaaacccaggattgactgacataatcaataccagatcaac 454 |||| |||||||| ||||| || || |||||||| || |||| |||||| Sbjct: 3468 tctggccaccaaagccagggtttacagacataattaagaccaaatcaac 3420
>emb|BX831851.1|CNS0A0WJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH33ZH11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1372 Score = 91.7 bits (46), Expect = 2e-15 Identities = 133/162 (82%) Strand = Plus / Minus Query: 189 ggtcttttgctggtcttaattcctttgatagcttcagcgtagtctttagccccgaaaacc 248 |||| ||||| || |||||||||||| |||||||| |||||||| ||||| || || || Sbjct: 1111 ggtcgtttgcgggccttaattccttttatagcttctgcgtagtccttagctccaaataca 1052 Query: 249 gcagaaccagcaacaagagcattcgcgccagcttcaatgaccttgtaggcatttttggga 308 || || ||||| || |||||||| |||||||| ||||||||| |||| ||||| |||| Sbjct: 1051 gctgatccagcgacgagagcatttgcgccagcgtcaatgaccgtgtacgcattcgcggga 992 Query: 309 ctgactccaccatcaacctcaatccaggggttcactcccttc 350 |||| ||||||||| |||||||| ||||| || |||||| Sbjct: 991 gtgacaacaccatcaaggtcaatccatgggtttacgcccttc 950
>gb|AY350711.1| Sisymbrium irio clone BAC Sio11E11, complete sequence Length = 95357 Score = 85.7 bits (43), Expect = 1e-13 Identities = 70/79 (88%) Strand = Plus / Minus Query: 364 ttctcaaatcagcaattttctttacttgactctcgataaagctctgcccaccaaacccag 423 ||||||| || || |||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 90038 ttctcaagtctgcgattttctttacttggctttcgataaagctctgcccaccaaacccag 89979 Query: 424 gattgactgacataatcaa 442 | || || ||||| ||||| Sbjct: 89978 ggttcacagacattatcaa 89960 Score = 42.1 bits (21), Expect = 1.6 Identities = 60/73 (82%) Strand = Plus / Minus Query: 220 cttcagcgtagtctttagccccgaaaaccgcagaaccagcaacaagagcattcgcgccag 279 ||||||||||||||||||| || || || || || ||||| || | |||||| || |||| Sbjct: 90389 cttcagcgtagtctttagctccaaatacagctgatccagccactaaagcatttgctccag 90330 Query: 280 cttcaatgacctt 292 | ||||| ||||| Sbjct: 90329 cctcaataacctt 90317
>dbj|AB010073.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MFB13 Length = 80376 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 378 attttctttacttgactctcgataaagctctgcccaccaaacccaggattgactgacata 437 |||||||||||||| || || ||||||||||| |||||||| ||||| ||||| ||||| Sbjct: 55130 attttctttacttggctttcaataaagctctgtccaccaaaaccagggttgaccgacatg 55189 Query: 438 atcaataccagatc 451 ||||| |||||||| Sbjct: 55190 atcaagaccagatc 55203 Score = 46.1 bits (23), Expect = 0.099 Identities = 35/39 (89%) Strand = Plus / Plus Query: 310 tgactccaccatcaacctcaatccaggggttcactccct 348 |||| ||||||||||| |||||||| ||||| ||||||| Sbjct: 54987 tgacaccaccatcaacttcaatccatgggtttactccct 55025 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 189 ggtcttttgctggtcttaattcctttgatagct 221 |||| |||||||| |||||||||||| |||||| Sbjct: 54662 ggtcgtttgctggccttaattccttttatagct 54694
>gb|AY513905.1| Zea mays subsp. parviglumis voucher PI331786 RFLP marker csu1171 Length = 468 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 167 tcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 172 tctttatgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377719.1| Zea mays subsp. mays clone B73 anonymous genomic RFLP marker Csu1171 Length = 468 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 167 tcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 172 tctttatgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377714.1| Zea mays subsp. mays clone Mo24W anonymous genomic RFLP marker Csu1171 Length = 468 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 167 tcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 172 tctttatgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377712.1| Zea mays subsp. mays clone Ky21 anonymous genomic RFLP marker Csu1171 Length = 468 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 167 tcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 172 tctttatgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377711.1| Zea mays subsp. mays clone W153R anonymous genomic RFLP marker Csu1171 Length = 468 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 167 tcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 172 tctttatgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377710.1| Zea mays subsp. mays clone SIN2 anonymous genomic RFLP marker Csu1171 Length = 468 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 167 tcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 172 tctttatgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377709.1| Zea mays subsp. mays clone SAN329 anonymous genomic RFLP marker Csu1171 Length = 468 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 167 tcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 172 tctttatgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377708.1| Zea mays subsp. mays clone APC13 anonymous genomic RFLP marker Csu1171 Length = 468 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 167 tcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 172 tctttatgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377706.1| Zea mays subsp. mays clone PI213793 anonymous genomic RFLP marker Csu1171 Length = 468 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 167 tcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 172 tctttatgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377699.1| Zea mays subsp. mays clone GUA131 anonymous genomic RFLP marker Csu1171 Length = 468 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 167 tcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 172 tctttatgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377698.1| Zea mays subsp. mays clone OAX68 anonymous genomic RFLP marker Csu1171 Length = 468 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 167 tcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 172 tctttatgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377695.1| Zea mays subsp. mays clone CHI349 anonymous genomic RFLP marker Csu1171 Length = 468 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 167 tcttcatgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 172 tctttatgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513910.1| Zea luxurians voucher G-5 RFLP marker csu1171 Length = 414 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 172 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513909.1| Zea mays subsp. mexicana voucher PI566673 RFLP marker csu1171 Length = 470 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 172 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513908.1| Zea mays subsp. mexicana voucher 11066 RFLP marker csu1171 Length = 469 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 172 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513907.1| Zea luxurians voucher PI311282 RFLP marker csu1171 Length = 470 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 172 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513904.1| Zea mays subsp. parviglumis voucher PI331783 RFLP marker csu1171 Length = 469 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 172 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcagctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513903.1| Zea mays subsp. parviglumis voucher 967 RFLP marker csu1171 Length = 469 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 172 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513902.1| Zea mays subsp. parviglumis voucher Site4 RFLP marker csu1171 Length = 468 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 172 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513901.1| Zea mays subsp. parviglumis voucher Site3 RFLP marker csu1171 Length = 468 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 172 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513900.1| Zea mays subsp. parviglumis voucher PI566691 RFLP marker csu1171 Length = 467 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 172 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513898.1| Zea mays subsp. parviglumis voucher PI384062 RFLP marker csu1171 Length = 468 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 172 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513897.1| Zea mays subsp. parviglumis voucher PI331789 RFLP marker csu1171 Length = 470 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 172 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513896.1| Zea mays subsp. mexicana voucher s.n.2 RFLP marker csu1171 Length = 468 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 172 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513895.1| Zea mays subsp. mexicana voucher 5630 RFLP marker csu1171 Length = 468 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 172 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513894.1| Zea mays subsp. mexicana voucher 28620 RFLP marker csu1171 Length = 468 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 172 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513893.1| Zea mays subsp. mexicana voucher PI566685 RFLP marker csu1171 Length = 470 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 172 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513892.1| Zea mays subsp. mexicana voucher PI566682 RFLP marker csu1171 Length = 432 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 172 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513891.1| Zea mays subsp. mexicana voucher PI566681 RFLP marker csu1171 Length = 468 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 172 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513890.1| Zea mays subsp. mexicana voucher PI566680 RFLP marker csu1171 Length = 469 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 172 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513888.1| Zea luxurians voucher 30900 RFLP marker csu1171 Length = 465 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 172 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513887.1| Zea luxurians voucher G-38 RFLP marker csu1171 Length = 465 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 172 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513886.1| Zea luxurians voucher G-36 RFLP marker csu1171 Length = 466 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 172 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513885.1| Zea luxurians voucher G-42 RFLP marker csu1171 Length = 465 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 172 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AY513884.1| Zea luxurians voucher 2440 RFLP marker csu1171 Length = 465 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 172 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377720.1| Tripsacum dactyloides clone T. anonymous genomic RFLP marker Csu1171 Length = 467 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 172 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 164 atgcagctacagctagaggtctttggctggtcttgattcctttgatagct 115
>gb|AF377718.1| Zea mays subsp. mays clone Tx601 anonymous genomic RFLP marker Csu1171 Length = 469 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 172 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377717.1| Zea mays subsp. mays clone T8 anonymous genomic RFLP marker Csu1171 Length = 468 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 172 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377716.1| Zea mays subsp. mays clone OH43 anonymous genomic RFLP marker Csu1171 Length = 468 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 172 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377715.1| Zea mays subsp. mays clone NC258 anonymous genomic RFLP marker Csu1171 Length = 469 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 172 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377713.1| Zea mays subsp. mays clone Mo17 anonymous genomic RFLP marker Csu1171 Length = 469 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 172 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377707.1| Zea mays subsp. mays clone CHH160 anonymous genomic RFLP marker Csu1171 Length = 469 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 172 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377705.1| Zea mays subsp. mays clone VEN453 anonymous genomic RFLP marker Csu1171 Length = 469 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 172 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377704.1| Zea mays subsp. mays clone OAX70 anonymous genomic RFLP marker Csu1171 Length = 469 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 172 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377703.1| Zea mays subsp. mays clone MAG450 anonymous genomic RFLP marker Csu1171 Length = 469 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 172 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377702.1| Zea mays subsp. mays clone YUC7 anonymous genomic RFLP marker Csu1171 Length = 468 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 172 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377700.1| Zea mays subsp. mays clone PUE32 anonymous genomic RFLP marker Csu1171 Length = 469 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 172 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377697.1| Zea mays subsp. mays clone URGII anonymous genomic RFLP marker Csu1171 Length = 469 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 172 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>gb|AF377696.1| Zea mays subsp. mays clone MEX48 anonymous genomic RFLP marker Csu1171 Length = 470 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 172 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| ||||| |||| |||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggctggtctttattcctttgatagct 118
>emb|X96878.1|CRPPEGENE C.reinhardtii mRNA for pentose-5-phosphate 3-epimerase Length = 820 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 315 ccaccatcaacctcaatccaggggttcactcccttctc 352 ||||| ||||||||||||||||||||||| |||||||| Sbjct: 286 ccaccgtcaacctcaatccaggggttcacgcccttctc 249
>gb|AY513906.1| Zea luxurians voucher 30919 RFLP marker csu1171 Length = 468 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 172 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| ||||| |||| |||||||| || |||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggccggtctttattcctttgatagct 118
>gb|AY513899.1| Zea mays subsp. parviglumis voucher PI384070 RFLP marker csu1171 Length = 469 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 172 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| ||||| |||| ||||||| ||||||||| ||||||||||||||| Sbjct: 167 atgcagctacagctaggggtctttggctggtctttattcctttgatagct 118
>gb|AY513889.1| Zea mays subsp. mexicana voucher PI566677 RFLP marker csu1171 Length = 468 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 172 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| ||||| |||| |||||||| || |||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggccggtctttattcctttgatagct 118
>gb|AF377701.1| Zea mays subsp. mays clone GUA14 anonymous genomic RFLP marker Csu1171 Length = 468 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 172 atgctgctacggctacaggtcttttgctggtcttaattcctttgatagct 221 |||| ||||| |||| |||||||| || |||||| ||||||||||||||| Sbjct: 167 atgcggctacagctagaggtctttggccggtctttattcctttgatagct 118
>gb|AF389523.1| Physcomitrella patens clone PPAR4 mRNA sequence Length = 206 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 381 ttctttacttgactctcgataaagctctgcccaccaaacccaggattgactgacataatc 440 ||||||||||| | ||||| |||||||| |||||||| ||||| ||||| ||||| ||| Sbjct: 32 ttctttacttgggtttcgatgaagctctgtccaccaaatccagggttgacagacatgatc 91 Query: 441 aa 442 || Sbjct: 92 aa 93
>gb|AE006199.1| Pasteurella multocida subsp. multocida str. Pm70 section 166 of 204 of the complete genome Length = 10462 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Minus Query: 411 ccaccaaacccaggattgactgacataa 438 ||||||||||| |||||||||||||||| Sbjct: 1253 ccaccaaaccccggattgactgacataa 1226
>gb|AC154408.2| Mus musculus BAC clone RP24-259A5 from 16, complete sequence Length = 158312 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 401 aaagctctgcccaccaaacccag 423 ||||||||||||||||||||||| Sbjct: 53875 aaagctctgcccaccaaacccag 53853
>gb|AE017196.1| Wolbachia endosymbiont of Drosophila melanogaster, complete genome Length = 1267782 Score = 46.1 bits (23), Expect = 0.099 Identities = 32/35 (91%) Strand = Plus / Plus Query: 407 ctgcccaccaaacccaggattgactgacataatca 441 |||||| ||||| ||||||||||||| |||||||| Sbjct: 687354 ctgccctccaaagccaggattgactgtcataatca 687388
>emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete sequence Length = 3214944 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 399 ataaagctctgcccaccaaacccaggattgactgacat 436 |||||||| |||||||||||||| ||||| || ||||| Sbjct: 2873558 ataaagctttgcccaccaaaccctggattaaccgacat 2873595
>gb|AC073193.10| Homo sapiens BAC clone RP11-175C14 from 7, complete sequence Length = 120436 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 125 aaagaggagatgttacacagtg 146 |||||||||||||||||||||| Sbjct: 56375 aaagaggagatgttacacagtg 56396
>gb|AC104831.3| Homo sapiens 3 BAC RP11-451G4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 115000 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3 gaaaatatatttctttgttgcc 24 |||||||||||||||||||||| Sbjct: 14453 gaaaatatatttctttgttgcc 14474
>gb|AC110381.5| Mus musculus BAC clone RP24-198I16 from chromosome 10, complete sequence Length = 166554 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 atgatggtgatctctgtgata 61 ||||||||||||||||||||| Sbjct: 6279 atgatggtgatctctgtgata 6299
>gb|AC159503.10| Mus musculus 10 BAC RP24-293I2 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 199258 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 atgatggtgatctctgtgata 61 ||||||||||||||||||||| Sbjct: 17097 atgatggtgatctctgtgata 17077
>gb|AC093532.2| Homo sapiens chromosome 5 clone RP11-407N4, complete sequence Length = 182564 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 193 ttttgctggtcttaattcctttgat 217 |||||||||||||| |||||||||| Sbjct: 99511 ttttgctggtcttacttcctttgat 99535
>gb|AC140372.3| Mus musculus BAC clone RP23-185B17 from chromosome 3, complete sequence Length = 180084 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 atctgatgatggtgatctctg 56 ||||||||||||||||||||| Sbjct: 20939 atctgatgatggtgatctctg 20959
>gb|AC026108.29| Homo sapiens 12 BAC RP11-438H24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 77790 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 193 ttttgctggtcttaattcctttgatagcttcag 225 ||||| || |||||||||||||||||| ||||| Sbjct: 16082 ttttgatgctcttaattcctttgatagattcag 16050 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 202 tcttaattcctttgatagcttcag 225 |||||||||||||||||| ||||| Sbjct: 15941 tcttaattcctttgatagattcag 15918
>emb|BX005405.11| Zebrafish DNA sequence from clone DKEY-19I22 in linkage group 20, complete sequence Length = 62329 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 108 gacaatggtaaaacaaaaaag 128 ||||||||||||||||||||| Sbjct: 4808 gacaatggtaaaacaaaaaag 4828
>gb|AC006975.2|AC006975 Homo sapiens PAC clone RP5-1026B21 from X, complete sequence Length = 146410 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 338 gttcactcccttctcttcgcataattttc 366 |||||||| ||||||| |||||||||||| Sbjct: 80199 gttcactctcttctctacgcataattttc 80227
>emb|BX470148.15| Zebrafish DNA sequence from clone CH211-198A16 in linkage group 20, complete sequence Length = 64300 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 gacaatggtaaaacaaaaaag 128 ||||||||||||||||||||| Sbjct: 59493 gacaatggtaaaacaaaaaag 59473
>emb|CR936503.1| Lactobacillus sakei strain 23K complete genome Length = 1884661 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 372 tcagcaattttctttacttga 392 ||||||||||||||||||||| Sbjct: 144844 tcagcaattttctttacttga 144824
>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome Length = 2201561 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 392 actctcgataaagctctgcccaccaaacccaggatt 427 |||||| ||||| || ||||||||||| |||||||| Sbjct: 1685972 actctctataaaactttgcccaccaaatccaggatt 1685937
>gb|AC119291.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0052K01, complete sequence Length = 144395 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 taaaacaaaaaagaggagat 135 |||||||||||||||||||| Sbjct: 50754 taaaacaaaaaagaggagat 50735
>gb|AC123811.3| Mus musculus BAC clone RP24-179L19 from chromosome 9, complete sequence Length = 204171 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 cagaaccagcaacaagagca 269 |||||||||||||||||||| Sbjct: 5857 cagaaccagcaacaagagca 5876
>emb|CR788248.24| Zebrafish DNA sequence from clone CH211-112B1 in linkage group 1, complete sequence Length = 87741 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 ctcaaatcagcaattttctt 385 |||||||||||||||||||| Sbjct: 25467 ctcaaatcagcaattttctt 25448
>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence Length = 3281944 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 cgcagaaccagcaacaagag 267 |||||||||||||||||||| Sbjct: 2961180 cgcagaaccagcaacaagag 2961199
>emb|AL035409.15|HS564M11 Human DNA sequence from clone RP4-564M11 on chromosome 1p31.1 Contains the 3' end of the SIAT7E gene for sialyltransferase 7 ((alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1, 3)-N-acetyl galactosaminide alpha-2,6-sialyltransferase) E, a novel gene and 3' end of the PIGK gene for phosphatidylinositol glycan class K, complete sequence Length = 138783 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 ctgacataatcaataccaga 449 |||||||||||||||||||| Sbjct: 52851 ctgacataatcaataccaga 52832
>emb|BX465853.12| Zebrafish DNA sequence from clone DKEY-18F23 in linkage group 23, complete sequence Length = 220945 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 ctcaaatcagcaattttctt 385 |||||||||||||||||||| Sbjct: 172979 ctcaaatcagcaattttctt 172998
>emb|AL935256.1| Lactobacillus plantarum strain WCFS1 complete genome; segment 5/11 Length = 302050 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 411 ccaccaaacccaggattgactgacataatcaa 442 |||||||| ||||||||||| | ||||||||| Sbjct: 223764 ccaccaaaaccaggattgacggtcataatcaa 223733
>emb|AL672262.11| Mouse DNA sequence from clone RP23-318G8 on chromosome 11, complete sequence Length = 101598 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 gtaggcatttttgggactga 312 |||||||||||||||||||| Sbjct: 63403 gtaggcatttttgggactga 63422
>emb|CR545472.6| Zebrafish DNA sequence from clone DKEYP-32B1 in linkage group 5, complete sequence Length = 75199 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 aggaaaatatatttctttgt 20 |||||||||||||||||||| Sbjct: 63100 aggaaaatatatttctttgt 63081
>gb|AC023886.7| Homo sapiens BAC clone RP11-402J6 from 4, complete sequence Length = 179697 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 aaaatatatttctttgttgc 23 |||||||||||||||||||| Sbjct: 137261 aaaatatatttctttgttgc 137242
>gb|AC073358.14| Homo sapiens 3 BAC RP11-501M7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164078 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 368 caaatcagcaattttctttacttg 391 ||||||||||||||| |||||||| Sbjct: 112291 caaatcagcaattttgtttacttg 112268
>gb|AC023394.11| Homo sapiens chromosome 18, clone RP11-389J22, complete sequence Length = 158050 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 aaaagaggagatgttacaca 143 |||||||||||||||||||| Sbjct: 78709 aaaagaggagatgttacaca 78728
>ref|XM_677933.1| PREDICTED: Danio rerio hypothetical protein LOC555433 (LOC555433), mRNA Length = 2460 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 atctgatgatggtgatctctgtga 59 ||||| |||||||||||||||||| Sbjct: 328 atctgctgatggtgatctctgtga 305
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 taaaacaaaaaagaggagat 135 |||||||||||||||||||| Sbjct: 26537279 taaaacaaaaaagaggagat 26537260
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 gaaaggcacctatgcaacgcaaac 104 ||||||||| |||||||||||||| Sbjct: 21557516 gaaaggcacatatgcaacgcaaac 21557493
>emb|BX821313.1|CNS0AA43 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL33ZE05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 433 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 ataattttctcaaatcagca 377 |||||||||||||||||||| Sbjct: 410 ataattttctcaaatcagca 391
>gb|AC002978.1| Homo sapiens 12 PAC P336P3 (Research Park Cancer Institute Human Genome PAC library) complete sequence Length = 102591 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 ctccaccatcaacctcaatccagg 336 ||||||||||| |||||||||||| Sbjct: 10927 ctccaccatcagcctcaatccagg 10904
>gb|AC092559.4| Oryza sativa chromosome 3 BAC OSJNBb0096M04 genomic sequence, complete sequence Length = 133846 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gtgatacaacgtatggcttg 75 |||||||||||||||||||| Sbjct: 11735 gtgatacaacgtatggcttg 11716
>gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genomic sequence, complete sequence Length = 145290 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gtgatacaacgtatggcttg 75 |||||||||||||||||||| Sbjct: 8854 gtgatacaacgtatggcttg 8873
>dbj|AP003342.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0049O23 Length = 121038 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 gaaaggcacctatgcaacgcaaac 104 ||||||||| |||||||||||||| Sbjct: 51055 gaaaggcacatatgcaacgcaaac 51032
>dbj|AP003296.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0697C12 Length = 149098 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 gaaaggcacctatgcaacgcaaac 104 ||||||||| |||||||||||||| Sbjct: 14069 gaaaggcacatatgcaacgcaaac 14046
>emb|AL954182.18| Zebrafish DNA sequence from clone CH211-205N18 in linkage group 20, complete sequence Length = 151552 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 36 atctgatgatggtgatctctgtga 59 ||||| |||||||||||||||||| Sbjct: 37242 atctgctgatggtgatctctgtga 37265
>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome Length = 5224283 Score = 40.1 bits (20), Expect = 6.1 Identities = 41/48 (85%) Strand = Plus / Plus Query: 406 tctgcccaccaaacccaggattgactgacataatcaataccagatcaa 453 ||||||||||||| ||||| || |||| ||||| ||||||| ||||| Sbjct: 3651218 tctgcccaccaaatccagggtttactgtcataagtaataccatatcaa 3651265
>gb|AC139378.4| Mus musculus BAC clone RP23-265F20 from 9, complete sequence Length = 256632 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 cagaaccagcaacaagagca 269 |||||||||||||||||||| Sbjct: 35845 cagaaccagcaacaagagca 35826 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,546,967 Number of Sequences: 3902068 Number of extensions: 5546967 Number of successful extensions: 117748 Number of sequences better than 10.0: 126 Number of HSP's better than 10.0 without gapping: 128 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 117269 Number of HSP's gapped (non-prelim): 457 length of query: 455 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 433 effective length of database: 17,147,199,772 effective search space: 7424737501276 effective search space used: 7424737501276 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
