ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbaet92c11 |
|---|---|
| Clone Library Name | barley_pub |
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 127 bits (319), Expect = 1e-29 Identities = 57/67 (85%), Positives = 64/67 (95%) Frame = -2 Query: 414 FSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI 235 +SKDPAKFEELK+KEIKNGRLA+LA VGFCVQQSAY GTGPLENLATHLADPWHNNIGD+ Sbjct: 178 YSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLENLATHLADPWHNNIGDV 237 Query: 234 VIPRNIY 214 +IP+ I+ Sbjct: 238 IIPKGIF 244
>CB2D_LYCES (P10707) Chlorophyll a-b binding protein 1D (LHCII type I CAB-1D)| (LHCP) (Fragment) Length = 116 Score = 68.6 bits (166), Expect = 6e-12 Identities = 35/55 (63%), Positives = 41/55 (74%) Frame = -2 Query: 411 SKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 ++DP F ELK+KEIKNGRLAM + GF V Q+ G GPLENLA HLADP +NN Sbjct: 51 AEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 104
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 68.6 bits (166), Expect = 6e-12 Identities = 35/55 (63%), Positives = 41/55 (74%) Frame = -2 Query: 411 SKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 ++DP F ELK+KEIKNGRLAM + GF V Q+ G GPLENLA HLADP +NN Sbjct: 201 AEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QALVTGKGPLENLADHLADPVNNN 254
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 68.6 bits (166), Expect = 6e-12 Identities = 35/55 (63%), Positives = 41/55 (74%) Frame = -2 Query: 411 SKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 ++DP F ELK+KEIKNGRLAM + GF V Q+ G GPLENLA HLADP +NN Sbjct: 201 AEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 254
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 68.6 bits (166), Expect = 6e-12 Identities = 35/55 (63%), Positives = 41/55 (74%) Frame = -2 Query: 411 SKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 ++DP F ELK+KEIKNGRLAM + GF V Q+ G GPLENLA HLADP +NN Sbjct: 202 AEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 255
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 68.6 bits (166), Expect = 6e-12 Identities = 35/55 (63%), Positives = 41/55 (74%) Frame = -2 Query: 411 SKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 ++DP F ELK+KEIKNGRLAM + GF V Q+ G GPLENLA HLADP +NN Sbjct: 202 AEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 255
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 68.6 bits (166), Expect = 6e-12 Identities = 35/55 (63%), Positives = 41/55 (74%) Frame = -2 Query: 411 SKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 ++DP F ELK+KEIKNGRLAM + GF V Q+ G GPLENLA HLADP +NN Sbjct: 202 AEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 255
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor| (LHCII type I CAB-1C) (LHCP) (Fragments) Length = 265 Score = 68.6 bits (166), Expect = 6e-12 Identities = 35/55 (63%), Positives = 41/55 (74%) Frame = -2 Query: 411 SKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 ++DP F ELK+KEIKNGRLAM + GF V Q+ G GPLENLA HLADP +NN Sbjct: 200 AEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 253
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 68.6 bits (166), Expect = 6e-12 Identities = 35/55 (63%), Positives = 41/55 (74%) Frame = -2 Query: 411 SKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 ++DP F ELK+KEIKNGRLAM + GF V Q+ G GPLENLA HLADP +NN Sbjct: 200 AEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 253
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type I CAB-1A) (LHCP) (Fragments) Length = 265 Score = 68.6 bits (166), Expect = 6e-12 Identities = 35/55 (63%), Positives = 41/55 (74%) Frame = -2 Query: 411 SKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 ++DP F ELK+KEIKNGRLAM + GF V Q+ G GPLENLA HLADP +NN Sbjct: 200 AEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 253
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 68.6 bits (166), Expect = 6e-12 Identities = 35/55 (63%), Positives = 41/55 (74%) Frame = -2 Query: 411 SKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 ++DP F ELK+KEIKNGRLAM + GF V Q+ G GPLENLA HLADP +NN Sbjct: 200 AEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 253
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 67.8 bits (164), Expect = 1e-11 Identities = 34/55 (61%), Positives = 41/55 (74%) Frame = -2 Query: 411 SKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 ++DP F ELK+KEIKNGRLAM + GF V Q+ G GP+ENLA HLADP +NN Sbjct: 209 AEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPIENLADHLADPVNNN 262
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 67.8 bits (164), Expect = 1e-11 Identities = 35/53 (66%), Positives = 39/53 (73%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP F ELK+KEIKNGRLAM + GF V Q+ G GPLENLA HLADP +NN Sbjct: 203 DPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 254
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 67.8 bits (164), Expect = 1e-11 Identities = 35/53 (66%), Positives = 39/53 (73%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP F ELK+KEIKNGRLAM + GF V Q+ G GPLENLA HLADP +NN Sbjct: 203 DPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 254
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 67.8 bits (164), Expect = 1e-11 Identities = 35/53 (66%), Positives = 39/53 (73%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP F ELK+KEIKNGRLAM + GF V Q+ G GPLENLA HLADP +NN Sbjct: 204 DPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 255
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor| (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 67.8 bits (164), Expect = 1e-11 Identities = 34/55 (61%), Positives = 41/55 (74%) Frame = -2 Query: 411 SKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 ++DP F ELK+KEIKNGRLAM + GF V Q+ G GPLENLA H+ADP +NN Sbjct: 202 AEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHIADPVNNN 255
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 67.8 bits (164), Expect = 1e-11 Identities = 34/55 (61%), Positives = 41/55 (74%) Frame = -2 Query: 411 SKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 ++DP F ELK+KEIKNGRLAM + GF V Q+ G GPLENLA H+ADP +NN Sbjct: 202 AEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHIADPVNNN 255
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 67.8 bits (164), Expect = 1e-11 Identities = 35/53 (66%), Positives = 39/53 (73%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP F ELK+KEIKNGRLAM + GF V Q+ G GPLENLA HLADP +NN Sbjct: 204 DPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 255
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 67.8 bits (164), Expect = 1e-11 Identities = 35/53 (66%), Positives = 39/53 (73%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP F ELK+KEIKNGRLAM + GF V Q+ G GPLENLA HLADP +NN Sbjct: 204 DPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 255
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 67.8 bits (164), Expect = 1e-11 Identities = 35/53 (66%), Positives = 39/53 (73%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP F ELK+KEIKNGRLAM + GF V Q+ G GPLENLA HLADP +NN Sbjct: 198 DPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 249
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 67.8 bits (164), Expect = 1e-11 Identities = 35/53 (66%), Positives = 39/53 (73%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP F ELK+KEIKNGRLAM + GF V Q+ G GPLENLA HLADP +NN Sbjct: 202 DPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 253
>CB21_RAPSA (P14584) Chlorophyll a-b binding of LHCII type 1 protein| (Chlorophyll a-b binding of LHCII type I protein) (CAB) (LHCP) (Fragment) Length = 124 Score = 67.8 bits (164), Expect = 1e-11 Identities = 35/53 (66%), Positives = 39/53 (73%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP F ELK+KEIKNGRLAM + GF V Q+ G GPLENLA HLADP +NN Sbjct: 61 DPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 112
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 67.4 bits (163), Expect = 1e-11 Identities = 33/57 (57%), Positives = 41/57 (71%) Frame = -2 Query: 414 FSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNI 244 F KD +ELKLKEIKNGRLAMLA +G+ + Q+ G GP +NL HLADP +NN+ Sbjct: 211 FGKDEKSMKELKLKEIKNGRLAMLAILGYFI-QALVTGVGPYQNLLDHLADPVNNNV 266
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 67.0 bits (162), Expect = 2e-11 Identities = 34/53 (64%), Positives = 39/53 (73%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP F ELK+KE+KNGRLAM + GF V Q+ G GPLENLA HLADP +NN Sbjct: 206 DPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 257
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 67.0 bits (162), Expect = 2e-11 Identities = 34/53 (64%), Positives = 39/53 (73%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP F ELK+KE+KNGRLAM + GF V Q+ G GPLENLA HLADP +NN Sbjct: 143 DPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 194
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 67.0 bits (162), Expect = 2e-11 Identities = 34/53 (64%), Positives = 39/53 (73%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP F ELK+KE+KNGRLAM + GF V Q+ G GPLENLA HLADP +NN Sbjct: 192 DPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 243
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 66.6 bits (161), Expect = 2e-11 Identities = 34/55 (61%), Positives = 40/55 (72%) Frame = -2 Query: 411 SKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 ++DP F ELK+K IKNGRLAM + GF V Q+ G GPLENLA HLADP +NN Sbjct: 202 AEDPEAFAELKVKHIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 255
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 66.6 bits (161), Expect = 2e-11 Identities = 34/53 (64%), Positives = 39/53 (73%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP F ELK+KEIKNGRLAM + GF V Q+ G GP+ENLA HLADP +NN Sbjct: 215 DPDAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPIENLADHLADPVNNN 266
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 66.6 bits (161), Expect = 2e-11 Identities = 33/53 (62%), Positives = 39/53 (73%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP +F ELK+KEIKNGRLAM + GF V Q+ G GP+ENLA HL DP +NN Sbjct: 201 DPERFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPIENLADHLTDPVNNN 252
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 66.2 bits (160), Expect = 3e-11 Identities = 34/53 (64%), Positives = 39/53 (73%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP F EL++KEIKNGRLAM + GF V Q+ G GPLENLA HLADP +NN Sbjct: 203 DPEAFAELEVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 254
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 66.2 bits (160), Expect = 3e-11 Identities = 33/53 (62%), Positives = 39/53 (73%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP F ELK+KE+KNGRLAM + GF V Q+ G GP+ENLA HLADP +NN Sbjct: 204 DPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPIENLADHLADPVNNN 255
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 66.2 bits (160), Expect = 3e-11 Identities = 33/53 (62%), Positives = 39/53 (73%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP F ELK+KE+KNGRLAM + GF V Q+ G GP+ENLA HLADP +NN Sbjct: 204 DPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPIENLADHLADPVNNN 255
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 66.2 bits (160), Expect = 3e-11 Identities = 34/53 (64%), Positives = 39/53 (73%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP F ELK+KEIKNGRLAM + GF V Q+ G GPLENLA HLA+P +NN Sbjct: 182 DPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLAEPVNNN 233
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 66.2 bits (160), Expect = 3e-11 Identities = 33/53 (62%), Positives = 39/53 (73%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP F ELK+KE+KNGRLAM + GF V Q+ G GPLENLA H+ADP +NN Sbjct: 199 DPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHIADPVNNN 250
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 65.9 bits (159), Expect = 4e-11 Identities = 33/53 (62%), Positives = 39/53 (73%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP F ELK+KE+KNGRLAM + GF V Q+ G GPLENLA HL+DP +NN Sbjct: 205 DPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLSDPVNNN 256
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCI type III CAB-4) (LHCP) Length = 251 Score = 65.9 bits (159), Expect = 4e-11 Identities = 32/52 (61%), Positives = 37/52 (71%) Frame = -2 Query: 399 AKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNI 244 A +E K KE+ NGRLAMLAF+GF VQ + G GP ENL HL+DPWHN I Sbjct: 196 APTQEAKEKELANGRLAMLAFLGFVVQHNV-TGKGPFENLLQHLSDPWHNTI 246
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 65.9 bits (159), Expect = 4e-11 Identities = 33/55 (60%), Positives = 41/55 (74%) Frame = -2 Query: 411 SKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 ++DP + ELK+KE+KNGRLAM + GF V Q+ G GPLENLA HLADP +NN Sbjct: 199 AEDPERSAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 252
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 65.5 bits (158), Expect = 5e-11 Identities = 34/56 (60%), Positives = 39/56 (69%) Frame = -2 Query: 411 SKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNI 244 S PAK +EL+ KEIKNGRLAMLA +G Q Y GTGP++NL HLADP H I Sbjct: 209 SGSPAKIKELRTKEIKNGRLAMLAVMGAWFQH-IYTGTGPIDNLFAHLADPGHATI 263
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 65.5 bits (158), Expect = 5e-11 Identities = 34/56 (60%), Positives = 39/56 (69%) Frame = -2 Query: 411 SKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNI 244 S PAK +EL+ KEIKNGRLAMLA +G Q Y GTGP++NL HLADP H I Sbjct: 209 SGSPAKIKELRTKEIKNGRLAMLAVMGAWFQH-IYTGTGPIDNLFAHLADPGHATI 263
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 65.1 bits (157), Expect = 6e-11 Identities = 33/53 (62%), Positives = 38/53 (71%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP F ELK+KEIKNGRLAM + GF V Q+ G GPL+NL HLADP +NN Sbjct: 204 DPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLDNLVDHLADPVNNN 255
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 65.1 bits (157), Expect = 6e-11 Identities = 33/53 (62%), Positives = 39/53 (73%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP F ELK+KE+K GRLAML+ GF V Q+ G GPLENLA H+ADP +NN Sbjct: 202 DPEAFGELKVKELKKGRLAMLSMFGFFV-QAIVTGKGPLENLADHIADPVNNN 253
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 65.1 bits (157), Expect = 6e-11 Identities = 33/53 (62%), Positives = 38/53 (71%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP F ELK+KEIKNGRLAM + GF V Q+ G GP+ENLA H+ADP NN Sbjct: 201 DPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPIENLADHIADPVANN 252
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 64.7 bits (156), Expect = 8e-11 Identities = 33/53 (62%), Positives = 38/53 (71%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP ELK+KE+KNGRLAM + GF V Q+ G GPLENLA HLADP +NN Sbjct: 193 DPEALAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 244
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 64.7 bits (156), Expect = 8e-11 Identities = 32/55 (58%), Positives = 39/55 (70%) Frame = -2 Query: 411 SKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 ++DP F ELK+KE KNGRLAM + GF + Q+ G GPLENLA HL DP +NN Sbjct: 202 AEDPEAFAELKVKETKNGRLAMFSMFGFFI-QAIVTGKGPLENLADHLVDPVNNN 255
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 64.7 bits (156), Expect = 8e-11 Identities = 32/60 (53%), Positives = 44/60 (73%) Frame = -2 Query: 411 SKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIV 232 +KDP + LK+KEIKNGRLAM A +GF + Q+ G GP+ENLA HL+DP+ NN+ ++ Sbjct: 212 AKDPEQGALLKVKEIKNGRLAMFAMLGFFI-QAYVTGEGPVENLAKHLSDPFGNNLLTVI 270
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 64.7 bits (156), Expect = 8e-11 Identities = 32/53 (60%), Positives = 39/53 (73%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP F ++K+KE+KNGRLAM + GF V Q+ G GPLENLA HLADP +NN Sbjct: 202 DPEAFADVKVKELKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 253
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 64.7 bits (156), Expect = 8e-11 Identities = 34/53 (64%), Positives = 38/53 (71%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 D F ELK+KEIKNGRLAM + GF V Q+ G GPLENLA HLADP +NN Sbjct: 201 DAEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 252
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 64.3 bits (155), Expect = 1e-10 Identities = 32/53 (60%), Positives = 39/53 (73%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP F ++K+KEIKNGRLAM + GF V Q+ G GP+ENLA HLADP +NN Sbjct: 215 DPDAFADVKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPIENLADHLADPVNNN 266
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 64.3 bits (155), Expect = 1e-10 Identities = 33/53 (62%), Positives = 38/53 (71%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP F ELK+KE+KNGRLAM + GF V Q+ G GPLENLA HLA P +NN Sbjct: 200 DPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLAGPVNNN 251
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 63.9 bits (154), Expect = 1e-10 Identities = 33/53 (62%), Positives = 38/53 (71%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP F ELK+KEIKNGRLAM + GF V Q+ G GP++NLA HLADP NN Sbjct: 193 DPDTFAELKVKEIKNGRLAMFSCFGFFV-QAIVTGKGPIQNLADHLADPGTNN 244
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 63.9 bits (154), Expect = 1e-10 Identities = 33/53 (62%), Positives = 38/53 (71%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP F ELK+KEIKNGRLAM A +GF V Q+ G GP+ENL HLA+P NN Sbjct: 211 DPDTFAELKVKEIKNGRLAMFACLGFFV-QAIVTGKGPIENLTDHLANPAENN 262
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 63.9 bits (154), Expect = 1e-10 Identities = 32/53 (60%), Positives = 38/53 (71%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP F ELK+KEIKNGRLAM + GF V Q+ G GP+ENL+ H+ADP NN Sbjct: 174 DPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPIENLSDHIADPVANN 225
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 63.9 bits (154), Expect = 1e-10 Identities = 33/56 (58%), Positives = 40/56 (71%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGD 238 DP K +L+L EIK+ RLAM+AF+GF VQ +A G GPL N ATHL+DP H I D Sbjct: 231 DPEKTAQLQLAEIKHARLAMVAFLGFAVQAAA-TGKGPLNNWATHLSDPLHTTIID 285
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 63.9 bits (154), Expect = 1e-10 Identities = 34/53 (64%), Positives = 37/53 (69%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP F ELK+KEIKNGRLAM + GF V Q+ G GPLENL HLADP NN Sbjct: 205 DPDTFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLNDHLADPVANN 256
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 63.5 bits (153), Expect = 2e-10 Identities = 32/53 (60%), Positives = 38/53 (71%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP F ELK+KE+KNGRLAM + GF V Q+ G GP+ENL+ HLADP NN Sbjct: 202 DPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPIENLSDHLADPAVNN 253
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 63.2 bits (152), Expect = 2e-10 Identities = 33/53 (62%), Positives = 37/53 (69%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP F ELK+KEIKNGRLAM + GF V Q+ G GP+ENL HLADP NN Sbjct: 202 DPDAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPIENLFDHLADPVANN 253
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 62.8 bits (151), Expect = 3e-10 Identities = 32/52 (61%), Positives = 38/52 (73%) Frame = -2 Query: 402 PAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 P F ELK+KEIKNGRLAM + GF V Q+ G GPLE+LA H+ADP +NN Sbjct: 204 PQAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLEDLADHIADPVNNN 254
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 62.8 bits (151), Expect = 3e-10 Identities = 32/58 (55%), Positives = 40/58 (68%) Frame = -2 Query: 411 SKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGD 238 + DP K +L+L EIK+ RLAM+ F+GF VQ +A G GPL N ATHL+DP H I D Sbjct: 226 ASDPVKKAQLQLAEIKHARLAMVGFLGFAVQAAA-TGKGPLNNWATHLSDPLHTTIID 282
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 62.4 bits (150), Expect = 4e-10 Identities = 32/53 (60%), Positives = 37/53 (69%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP F ELK+KEIKNGRLAM + GF V Q+ G GP+ENL H+ADP NN Sbjct: 202 DPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPIENLYDHVADPVANN 253
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 62.4 bits (150), Expect = 4e-10 Identities = 32/53 (60%), Positives = 37/53 (69%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP F ELK+KEIKNGRLAM + GF V Q+ G GP+ENL H+ADP NN Sbjct: 202 DPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPIENLFDHVADPVANN 253
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 62.4 bits (150), Expect = 4e-10 Identities = 33/53 (62%), Positives = 36/53 (67%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP F ELK+KEIKNGRLAM + GF V Q+ G GPLENL HL DP NN Sbjct: 205 DPVTFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLFDHLDDPVANN 256
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 62.4 bits (150), Expect = 4e-10 Identities = 32/52 (61%), Positives = 37/52 (71%) Frame = -2 Query: 402 PAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 P F ELK+KE+KNGRLAM + GF V + G GPLENLA HLADP +NN Sbjct: 166 PEAFAELKVKELKNGRLAMFSMFGFFV-PAIVTGKGPLENLADHLADPVNNN 216
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 61.6 bits (148), Expect = 7e-10 Identities = 31/53 (58%), Positives = 37/53 (69%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP F ELK+KEIKNGRLAM + GF V Q+ G GP+ENL+ H+ DP NN Sbjct: 202 DPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPIENLSDHINDPVANN 253
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 61.2 bits (147), Expect = 9e-10 Identities = 31/53 (58%), Positives = 37/53 (69%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP F ELK+KE+KNGRLAM + GF V Q+ G GP+ENL H+ADP NN Sbjct: 200 DPDTFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPIENLFDHVADPVANN 251
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 60.8 bits (146), Expect = 1e-09 Identities = 32/53 (60%), Positives = 36/53 (67%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP F ELK+KEIKNGRLAM + GF V Q+ G GPLENL HL +P NN Sbjct: 202 DPTTFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLLDHLDNPVANN 253
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 60.5 bits (145), Expect = 2e-09 Identities = 32/53 (60%), Positives = 36/53 (67%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP ELK+KEIKNGRLAM + GF V Q+ G GP+ENL HLADP NN Sbjct: 203 DPEACAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPIENLYDHLADPVANN 254
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 60.5 bits (145), Expect = 2e-09 Identities = 30/53 (56%), Positives = 37/53 (69%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP F ELK+KE+KNGRLAM + GF V Q+ G GP++NL H+ADP NN Sbjct: 202 DPDSFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPIQNLYDHVADPVANN 253
>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2| (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP) (Fragment) Length = 150 Score = 60.1 bits (144), Expect = 2e-09 Identities = 32/53 (60%), Positives = 36/53 (67%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP ELK+KEIKNGRLAM + GF V Q+ G GP+ENL HLADP NN Sbjct: 87 DPEAKAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPIENLYDHLADPVANN 138
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 60.1 bits (144), Expect = 2e-09 Identities = 31/52 (59%), Positives = 37/52 (71%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHN 250 DP F ELK+KEIKNGRLAM + +GF V Q+ G GP++NL HLADP N Sbjct: 190 DPDTFAELKVKEIKNGRLAMFSCLGFFV-QAIVTGKGPVQNLTDHLADPTVN 240
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 57.4 bits (137), Expect = 1e-08 Identities = 30/53 (56%), Positives = 36/53 (67%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 DP F ELK+KEIKNGRLA + GF V Q+ G GP++NL HLA+P NN Sbjct: 190 DPDTFAELKVKEIKNGRLASFSMFGFFV-QAIVTGKGPVQNLDDHLANPTVNN 241
>CB21_EUGGR (P12327) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 127 Score = 55.1 bits (131), Expect = 6e-08 Identities = 31/59 (52%), Positives = 37/59 (62%), Gaps = 1/59 (1%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADP-WHNNIGDIV 232 DP F ELK+KEIKNGRLAM +GF Q+ G GP+EN HL DP HN + +V Sbjct: 59 DPDTFPELKVKEIKNGRLAMSGMLGF-YAQAIVTGEGPVENWLYHLQDPSAHNGLTALV 116
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor| [Contains: LH38 protein 1; LH38 protein 2; LH38 protein 3] (Fragment) Length = 530 Score = 47.8 bits (112), Expect = 1e-05 Identities = 26/51 (50%), Positives = 32/51 (62%) Frame = -2 Query: 381 KLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIVI 229 K EIKNGRLA+ A +GF VQ+ G+ PL NLA HL P NI D ++ Sbjct: 123 KEAEIKNGRLALTALLGFEVQRHVVGGS-PLANLAEHLQQPLQRNIADSIM 172 Score = 40.4 bits (93), Expect = 0.002 Identities = 22/43 (51%), Positives = 26/43 (60%) Frame = -2 Query: 372 EIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNI 244 E+KNGRLA+ A G Q A G PL NL+ HLA+P NI Sbjct: 314 EVKNGRLALTAVAGLTAQYLA-TGESPLANLSAHLANPIGANI 355 Score = 33.9 bits (76), Expect = 0.15 Identities = 18/37 (48%), Positives = 23/37 (62%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTG 295 DP FE +++ E+ +GRLAMLA VG V Y G G Sbjct: 33 DPDTFERMRIAEVYHGRLAMLAVVGALVPD--YLGKG 67 Score = 30.0 bits (66), Expect = 2.2 Identities = 19/37 (51%), Positives = 20/37 (54%) Frame = -2 Query: 390 EELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENL 280 E K EIKNGRLAM G V QS G P+ NL Sbjct: 493 EYTKEAEIKNGRLAMNGMFGLEV-QSHVTGKSPINNL 528 Score = 29.3 bits (64), Expect = 3.7 Identities = 13/30 (43%), Positives = 20/30 (66%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQ 316 DP FE +++ E+ + RL+MLA VG V + Sbjct: 402 DPVTFERMQVAEVFHCRLSMLALVGCLVPE 431
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast| precursor (LHCII type I CAB-AB10) (LHCP) Length = 268 Score = 47.0 bits (110), Expect = 2e-05 Identities = 27/55 (49%), Positives = 34/55 (61%) Frame = -2 Query: 411 SKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 247 ++D F ELK+KE+KNGRLAM + GF V Q+ LENLA HL +NN Sbjct: 203 AEDTEAFAELKVKELKNGRLAMFSMFGFFV-QAIVSRKDRLENLADHLGWTVNNN 256
>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast| precursor (LHCII protein 4.3) (LHCB4.3) Length = 276 Score = 45.8 bits (107), Expect = 4e-05 Identities = 24/44 (54%), Positives = 32/44 (72%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLAT 274 DP K + LKL EIK+ RLAM+AF+ F + Q+A+ G GP+ LAT Sbjct: 231 DPEKLDTLKLAEIKHSRLAMVAFLIFAL-QAAFTGKGPVSFLAT 273
>L181_CHLEU (Q03965) Chlorophyll a-b binding protein L1818, chloroplast| precursor Length = 270 Score = 45.1 bits (105), Expect = 7e-05 Identities = 20/43 (46%), Positives = 29/43 (67%) Frame = -2 Query: 408 KDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENL 280 +DP + EL+ KE+ NGRLAM+A GF +Q+ A PG ++L Sbjct: 193 EDPEELRELQTKELNNGRLAMIAIAGFVLQEVAEPGVEIFQHL 235
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor| [Contains: LH35 protein 1; LH35 protein 2] (Fragment) Length = 331 Score = 42.4 bits (98), Expect = 4e-04 Identities = 27/56 (48%), Positives = 31/56 (55%), Gaps = 6/56 (10%) Frame = -2 Query: 393 FEELKL------KEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNI 244 F+ LKL +EIKNGRLAM +G Q A G PL NLA H A+P NI Sbjct: 272 FDPLKLTTDYTKREIKNGRLAMTGLLGLTFQYLA-TGESPLANLAAHFANPVGANI 326 Score = 40.8 bits (94), Expect = 0.001 Identities = 24/50 (48%), Positives = 26/50 (52%) Frame = -2 Query: 390 EELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIG 241 E K EIKNGRLAM+ G VQ GP+ NL HL P NIG Sbjct: 91 EYTKAAEIKNGRLAMIGMFGLEVQNHV-TAQGPVANLIEHLRHPLAANIG 139 Score = 32.0 bits (71), Expect = 0.58 Identities = 15/27 (55%), Positives = 20/27 (74%) Frame = -2 Query: 402 PAKFEELKLKEIKNGRLAMLAFVGFCV 322 P +E +++ E+ NGRLAMLA VG CV Sbjct: 1 PTVYERMRVAEVFNGRLAMLAIVG-CV 26
>FCPD_PHATR (Q08587) Fucoxanthin-chlorophyll a-c binding protein D, chloroplast| precursor Length = 197 Score = 38.9 bits (89), Expect = 0.005 Identities = 19/38 (50%), Positives = 27/38 (71%), Gaps = 2/38 (5%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSA--YPGT 298 D KF+ L+ EIK+GR++MLA VG+ VQ++ PGT Sbjct: 56 DQEKFDRLRYVEIKHGRISMLAVVGYLVQEAGVRLPGT 93
>FCPC_PHATR (Q08586) Fucoxanthin-chlorophyll a-c binding protein C, chloroplast| precursor Length = 197 Score = 38.9 bits (89), Expect = 0.005 Identities = 19/38 (50%), Positives = 27/38 (71%), Gaps = 2/38 (5%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSA--YPGT 298 D KF+ L+ EIK+GR++MLA VG+ VQ++ PGT Sbjct: 56 DQEKFDRLRYVEIKHGRISMLAVVGYLVQEAGVRLPGT 93
>FCPF_PHATR (Q41094) Fucoxanthin-chlorophyll a-c binding protein F, chloroplast| precursor Length = 197 Score = 38.5 bits (88), Expect = 0.006 Identities = 18/47 (38%), Positives = 29/47 (61%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLA 265 D KF+ L+ E+K+GR++MLA VG+ VQ++ G ++ T A Sbjct: 56 DQEKFDRLRYVELKHGRISMLAVVGYLVQENGIRLPGDIDYSGTSFA 102
>FCPB_PHATR (Q08585) Fucoxanthin-chlorophyll a-c binding protein B, chloroplast| precursor Length = 198 Score = 37.0 bits (84), Expect = 0.018 Identities = 18/48 (37%), Positives = 28/48 (58%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLAD 262 D KF+ L+ EIK+GR++MLA G+ Q++ + G + T AD Sbjct: 56 DQEKFDRLRYVEIKHGRISMLAVAGYLAQEAGWRLGGDIALDGTKFAD 103
>FCPE_PHATR (Q41093) Fucoxanthin-chlorophyll a-c binding protein E, chloroplast| precursor Length = 197 Score = 36.6 bits (83), Expect = 0.023 Identities = 17/44 (38%), Positives = 27/44 (61%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLAT 274 D KF+ L+ EIK+GR++MLA G+ VQ++ G ++ T Sbjct: 56 DQEKFDRLRYVEIKHGRISMLAVAGYLVQENGIRLPGDIDYSGT 99
>FCPD_MACPY (Q40298) Fucoxanthin-chlorophyll a-c binding protein D, chloroplast| precursor (Fragment) Length = 182 Score = 36.6 bits (83), Expect = 0.023 Identities = 16/32 (50%), Positives = 22/32 (68%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSA 310 D +FE L+ E+K+GR+AMLA G QQ+A Sbjct: 29 DQERFERLRYVEVKHGRIAMLAIAGHLTQQNA 60
>FCPE_MACPY (Q40301) Fucoxanthin-chlorophyll a-c binding protein E, chloroplast| precursor Length = 212 Score = 35.8 bits (81), Expect = 0.040 Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 2/45 (4%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSA-YPGTGPL-ENLA 277 D +F+ L+ EIK+GR+AMLA VG QQ+ PG ENLA Sbjct: 59 DQERFDRLRYVEIKHGRIAMLAVVGHITQQNTRLPGMLSFKENLA 103
>FCPB_MACPY (Q40296) Fucoxanthin-chlorophyll a-c binding protein B, chloroplast| precursor Length = 217 Score = 35.0 bits (79), Expect = 0.068 Identities = 15/31 (48%), Positives = 21/31 (67%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQS 313 D +FE L+ E+K+GR+AMLA G QQ+ Sbjct: 64 DQERFERLRYVEVKHGRIAMLAIAGHLTQQN 94
>FCPF_MACPY (Q40300) Fucoxanthin-chlorophyll a-c binding protein F, chloroplast| precursor (Fragment) Length = 211 Score = 35.0 bits (79), Expect = 0.068 Identities = 15/31 (48%), Positives = 21/31 (67%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQS 313 D +FE L+ E+K+GR+AMLA G QQ+ Sbjct: 58 DQERFERLRYVEVKHGRIAMLAIAGHLTQQN 88
>FCPA_MACPY (Q40297) Fucoxanthin-chlorophyll a-c binding protein A, chloroplast| precursor Length = 217 Score = 34.7 bits (78), Expect = 0.089 Identities = 16/32 (50%), Positives = 21/32 (65%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSA 310 D FE L+ E+K+GR+AMLA G QQ+A Sbjct: 64 DQDGFERLRYVEVKHGRIAMLAIAGHLTQQNA 95
>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29| Length = 279 Score = 34.3 bits (77), Expect = 0.12 Identities = 24/57 (42%), Positives = 33/57 (57%) Frame = -2 Query: 411 SKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIG 241 S+D + LK EIK+ RLAM++F G+ V Q+ G G L +LA AD +N G Sbjct: 224 SEDEERAFRLKTAEIKHARLAMVSFFGYGV-QALSTGEGALGSLA-KFADGLNNGKG 278
>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast| precursor (FCP) Length = 208 Score = 33.5 bits (75), Expect = 0.20 Identities = 14/31 (45%), Positives = 22/31 (70%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQS 313 DP +F ++ KE+ +GRLAM+A GF Q++ Sbjct: 163 DPDEFRLMQEKELSHGRLAMIAAAGFLAQEA 193 Score = 31.6 bits (70), Expect = 0.76 Identities = 15/35 (42%), Positives = 22/35 (62%) Frame = -2 Query: 408 KDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYP 304 KD + L+ E +GR+AMLA +GF VQ+ +P Sbjct: 55 KDKLEVYRLREAETTHGRVAMLASLGFVVQEKFHP 89
>FCPC_MACPY (Q40299) Fucoxanthin-chlorophyll a-c binding protein C, chloroplast| precursor Length = 216 Score = 33.5 bits (75), Expect = 0.20 Identities = 16/32 (50%), Positives = 20/32 (62%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSA 310 D FE L+ E+K GR+AMLA G QQ+A Sbjct: 63 DQDAFERLRYVEVKLGRIAMLAIAGHLTQQNA 94
>FCPA_PHATR (Q08584) Fucoxanthin-chlorophyll a-c binding protein A, chloroplast| precursor Length = 196 Score = 33.1 bits (74), Expect = 0.26 Identities = 15/41 (36%), Positives = 24/41 (58%) Frame = -2 Query: 396 KFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLAT 274 KF+ L+ EIK+GR+ MLA G+ Q++ G ++ T Sbjct: 59 KFDRLRYVEIKHGRICMLAVAGYLTQEAGIRLPGDIDYSGT 99
>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast| precursor Length = 261 Score = 32.3 bits (72), Expect = 0.44 Identities = 16/29 (55%), Positives = 20/29 (68%) Frame = -2 Query: 414 FSKDPAKFEELKLKEIKNGRLAMLAFVGF 328 ++ D K E LKL EIK+ RLAMLA + F Sbjct: 217 YNPDTDKLERLKLAEIKHARLAMLAMLIF 245
>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast| precursor (CAB-10B) (LHCP) Length = 256 Score = 31.6 bits (70), Expect = 0.76 Identities = 16/26 (61%), Positives = 18/26 (69%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGF 328 D K E LKL EIK+ RLAMLA + F Sbjct: 215 DTEKLERLKLAEIKHSRLAMLAMLIF 240
>Y1541_METJA (Q58936) Hypothetical protein MJ1541| Length = 420 Score = 30.8 bits (68), Expect = 1.3 Identities = 19/65 (29%), Positives = 32/65 (49%) Frame = -2 Query: 411 SKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIV 232 +K+ AK +K EI+ G LA + + P P EN+ +HL ++ + D++ Sbjct: 333 TKNGAKALNIKAGEIREGYLADIVLINL-----DKPYLYPKENIMSHLVYAFNGFVDDVI 387 Query: 231 IPRNI 217 I NI Sbjct: 388 IDGNI 392
>FCP_ODOSI (Q42395) Fucoxanthin-chlorophyll a-c binding protein, chloroplast| precursor (FCP) Length = 203 Score = 30.4 bits (67), Expect = 1.7 Identities = 13/40 (32%), Positives = 26/40 (65%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLE 286 D +F+ L+ E+K+GR+A +AF+G V ++ +G ++ Sbjct: 55 DQERFDRLRYVEVKHGRIAHVAFLGQIVTRNGIHLSGNID 94
>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast| precursor (CAB-10A) (LHCP) Length = 256 Score = 30.4 bits (67), Expect = 1.7 Identities = 15/26 (57%), Positives = 18/26 (69%) Frame = -2 Query: 405 DPAKFEELKLKEIKNGRLAMLAFVGF 328 D K E LK+ EIK+ RLAMLA + F Sbjct: 215 DTEKLERLKVAEIKHARLAMLAMLIF 240
>CCAC_AMPCA (P55738) Caroteno-chlorophyll a-c binding protein (Fragment)| Length = 102 Score = 30.0 bits (66), Expect = 2.2 Identities = 13/26 (50%), Positives = 20/26 (76%) Frame = -2 Query: 393 FEELKLKEIKNGRLAMLAFVGFCVQQ 316 F++L EIK+GR+AMLA +G+ Q+ Sbjct: 29 FKKLAQTEIKHGRVAMLATMGYITQE 54
>GFRA4_RAT (Q9EPI2) GDNF family receptor alpha-4 precursor (GFR-alpha-4)| (Persephin receptor) Length = 273 Score = 30.0 bits (66), Expect = 2.2 Identities = 18/61 (29%), Positives = 24/61 (39%), Gaps = 5/61 (8%) Frame = +2 Query: 161 CAPAPRSPLSPVGSAQGP*IFLGMTMSPMLLCHGSARCVARF-----SSGPVPGYADCCT 325 CA R +P + GP + + P+ C S RC R S P PG D C Sbjct: 107 CAERRRQTFAPACAFSGPQLAPPSCLKPLDRCERSRRCRPRLFAFQASCAPAPGSRDGCP 166 Query: 326 Q 328 + Sbjct: 167 E 167
>TREA_PSEAE (Q9I165) Periplasmic trehalase precursor (EC 3.2.1.28)| (Alpha,alpha-trehalase) (Alpha,alpha-trehalose glucohydrolase) Length = 545 Score = 28.9 bits (63), Expect = 4.9 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%) Frame = -2 Query: 408 KDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLE---NLATHLADPW 256 ++PA+ L+E + + AFVG ++S T P E +LA+H++D W Sbjct: 78 REPARIRADYLRERERPGFDLRAFVGRNFEESGSVETAPPEAGADLASHISDLW 131
>TR4_RAT (P55094) Orphan nuclear receptor TR4| Length = 596 Score = 28.9 bits (63), Expect = 4.9 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 6/54 (11%) Frame = -3 Query: 146 VFESIHWLITLPRWLC------ARTVRACWNCTTTSALRPATFVMCKA*VTAAV 3 +F S+HW ++P + VRACWN T L VM + + AA+ Sbjct: 394 LFLSMHWARSIPAFQALGQDCNTSLVRACWNELFTLGLAQCAQVMSLSTILAAI 447
>TR4_MOUSE (P49117) Orphan nuclear receptor TR4 (Orphan nuclear receptor TAK1)| Length = 596 Score = 28.9 bits (63), Expect = 4.9 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 6/54 (11%) Frame = -3 Query: 146 VFESIHWLITLPRWLC------ARTVRACWNCTTTSALRPATFVMCKA*VTAAV 3 +F S+HW ++P + VRACWN T L VM + + AA+ Sbjct: 394 LFLSMHWARSIPAFQALGQDCNTSLVRACWNELFTLGLAQCAQVMSLSTILAAI 447
>TR4_HUMAN (P49116) Orphan nuclear receptor TR4 (Orphan nuclear receptor TAK1)| Length = 596 Score = 28.9 bits (63), Expect = 4.9 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 6/54 (11%) Frame = -3 Query: 146 VFESIHWLITLPRWLC------ARTVRACWNCTTTSALRPATFVMCKA*VTAAV 3 +F S+HW ++P + VRACWN T L VM + + AA+ Sbjct: 394 LFLSMHWARSIPAFQALGQDCNTSLVRACWNELFTLGLAQCAQVMSLSTILAAI 447
>OR6N2_HUMAN (Q8NGY6) Olfactory receptor 6N2| Length = 317 Score = 28.9 bits (63), Expect = 4.9 Identities = 9/29 (31%), Positives = 16/29 (55%) Frame = -3 Query: 155 FIHVFESIHWLITLPRWLCARTVRACWNC 69 ++ + +H+ I + LCA+ ACW C Sbjct: 123 YLAICRPLHYPIIMTTTLCAKMAAACWTC 151
>COE4_HUMAN (Q9BQW3) Transcription factor COE4 (Early B-cell factor 4) (EBF-4)| (Olf-1/EBF-like 4) (OE-4) (O/E-4) Length = 644 Score = 28.9 bits (63), Expect = 4.9 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Frame = +2 Query: 158 PCAPAPRSPLSPVGSAQGP*IF-LGMTMSPMLLCHGSARCVARFSSGPVPGYADCCT 325 P AP P +PL+P S P + + SP+ + G A + GP PGYA C+ Sbjct: 509 PRAPGPLAPLAP--SHPHPAVVGINAFSSPLAIAVGDA------TPGPEPGYARSCS 557
>FABP6_CAEEL (O01812) Fatty acid-binding protein homolog 6| Length = 135 Score = 28.5 bits (62), Expect = 6.4 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 5/51 (9%) Frame = +1 Query: 46 GRRADVVVQFQHARTVRAQ-----SQRGKVINQWIDSKT*MKTMRSGSSIS 183 GR VV F++ + + Q S + +I +W++ + T+ SGS +S Sbjct: 78 GRTVKSVVNFENGKFIHIQKKIKDSDKESIITRWLEGDKLITTLESGSVVS 128
>BAZ2A_HUMAN (Q9UIF9) Bromodomain adjacent to zinc finger domain 2A (Transcription| termination factor I-interacting protein 5) (TTF-I-interacting protein 5) (Tip5) (hWALp3) Length = 1878 Score = 28.5 bits (62), Expect = 6.4 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%) Frame = -1 Query: 298 RPAGEPGHAPRGP--VAQQHRRHRHPQKYLRPL 206 R AG+PG P+ P + Q RR R P K+ + + Sbjct: 1359 RRAGDPGEMPQSPTGLGQPKRRGRPPSKFFKQM 1391
>GFRA4_MOUSE (Q9JJT2) GDNF family receptor alpha-4 precursor (GFR-alpha-4)| (Persephin receptor) Length = 260 Score = 28.1 bits (61), Expect = 8.3 Identities = 17/61 (27%), Positives = 23/61 (37%), Gaps = 5/61 (8%) Frame = +2 Query: 161 CAPAPRSPLSPVGSAQGP*IFLGMTMSPMLLCHGSARCVARF-----SSGPVPGYADCCT 325 CA R +P + GP + + P+ C S C R S P PG D C Sbjct: 99 CAERRRQTFAPACAFSGPGLVPPSCLEPLERCERSRLCRPRLLAFQASCAPAPGSRDRCP 158 Query: 326 Q 328 + Sbjct: 159 E 159 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,779,098 Number of Sequences: 219361 Number of extensions: 996483 Number of successful extensions: 3100 Number of sequences better than 10.0: 106 Number of HSP's better than 10.0 without gapping: 2876 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3024 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
