ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet91h11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1HNLS_SORBI (P52708) P-(S)-hydroxymandelonitrile lyase precursor ... 28 5.1

>HNLS_SORBI (P52708) P-(S)-hydroxymandelonitrile lyase precursor (EC 4.1.2.11)|
           (Hydroxynitrile lyase) (HNL) [Contains:
           P-(S)-hydroxymandelonitrile lyase chain A;
           P-(S)-hydroxymandelonitrile lyase chain B] (Fragment)
          Length = 366

 Score = 28.5 bits (62), Expect = 5.1
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 109 DHPWPLCKSTCFDQTGQ 59
           ++PW +C +T FDQ GQ
Sbjct: 227 EYPWTVCSNTIFDQWGQ 243


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,870,507
Number of Sequences: 219361
Number of extensions: 352828
Number of successful extensions: 731
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 731
length of database: 80,573,946
effective HSP length: 37
effective length of database: 72,457,589
effective search space used: 1738982136
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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