ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet91h11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_480223.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1928 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Minus Query: 152 ctacgtgtcgagctccaggggatcggggga 181 ||||||||||||||| |||||||| ||||| Sbjct: 1711 ctacgtgtcgagctcgaggggatcagggga 1682
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Minus Query: 152 ctacgtgtcgagctccaggggatcggggga 181 ||||||||||||||| |||||||| ||||| Sbjct: 3738824 ctacgtgtcgagctcgaggggatcagggga 3738795
>dbj|AP005847.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ9990_A01 Length = 101684 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Minus Query: 152 ctacgtgtcgagctccaggggatcggggga 181 ||||||||||||||| |||||||| ||||| Sbjct: 62321 ctacgtgtcgagctcgaggggatcagggga 62292
>dbj|AP005605.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1449_C01 Length = 192857 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Minus Query: 152 ctacgtgtcgagctccaggggatcggggga 181 ||||||||||||||| |||||||| ||||| Sbjct: 4041 ctacgtgtcgagctcgaggggatcagggga 4012
>dbj|AK060560.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-F11, full insert sequence Length = 1928 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Minus Query: 152 ctacgtgtcgagctccaggggatcggggga 181 ||||||||||||||| |||||||| ||||| Sbjct: 1711 ctacgtgtcgagctcgaggggatcagggga 1682
>dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 1, complete sequence Length = 3288558 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 66 gtttggtcgaaacaagtgg 84 ||||||||||||||||||| Sbjct: 333948 gtttggtcgaaacaagtgg 333930
>emb|AL732572.10| Mouse DNA sequence from clone RP23-32C16 on chromosome 2, complete sequence Length = 213704 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 23 gactggatttacagttgcc 41 ||||||||||||||||||| Sbjct: 181675 gactggatttacagttgcc 181657 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,320,545 Number of Sequences: 3902068 Number of extensions: 1320545 Number of successful extensions: 87704 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 87641 Number of HSP's gapped (non-prelim): 63 length of query: 185 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 163 effective length of database: 17,147,199,772 effective search space: 2794993562836 effective search space used: 2794993562836 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
