>VSI3_REOVJ (P30211) Sigma 3 protein (Major outer capsid protein)|
          Length = 365

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +2

Query: 35  KLLQSINHTQNTCKGRYSMQNTNQTGLFYRA*VKGPI 145
           KL+ ++NHT  + K RY++     TG + R   + PI
Sbjct: 297 KLVDAVNHTWGSEKIRYALGPGGMTGWYNRTMQQAPI 333


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,329,356
Number of Sequences: 219361
Number of extensions: 657894
Number of successful extensions: 1137
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1137
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 1386249648
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)