>gb|AC114763.6| Homo sapiens BAC clone RP11-369K2 from 2, complete sequence
          Length = 87248

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 101   acagcagcttggcgtacaaccgtctt 126
             ||||||||||||| ||||||||||||
Sbjct: 13338 acagcagcttggcttacaaccgtctt 13313

>gb|AC016737.8| Homo sapiens BAC clone RP11-394I13 from 2, complete sequence
          Length = 196085

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 42     caagttacagaatattcaacta 63
              ||||||||||||||||||||||
Sbjct: 126156 caagttacagaatattcaacta 126177

>ref|XM_763279.1| Giardia lamblia ATCC 50803 hypothetical protein
           (GLP_15_12905_13390) partial mRNA
          Length = 486

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 68  ttgagcaggttctcatcagct 88
           |||||||||||||||||||||
Sbjct: 443 ttgagcaggttctcatcagct 423

>ref|XM_763280.1| Giardia lamblia ATCC 50803 hypothetical protein
           (GLP_15_13494_12943) partial mRNA
          Length = 552

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 68  ttgagcaggttctcatcagct 88
           |||||||||||||||||||||
Sbjct: 148 ttgagcaggttctcatcagct 168

>emb|BX957258.12| Zebrafish DNA sequence from clone DKEY-285J17 in linkage group 22,
              complete sequence
          Length = 169327

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 207    aattatttccccctaaaaatg 227
              |||||||||||||||||||||
Sbjct: 120544 aattatttccccctaaaaatg 120524

>gb|AC147382.3| Pan troglodytes BAC clone RP43-171M24 from 7, complete sequence
          Length = 198872

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 208    attatttccccctaaaaatg 227
              ||||||||||||||||||||
Sbjct: 121848 attatttccccctaaaaatg 121829

>gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118, complete genome
          Length = 1827111

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 97     cctaacagcagcttggcgtacaac 120
              ||||||||| ||||||||||||||
Sbjct: 609609 cctaacagctgcttggcgtacaac 609632

>gb|AC091730.5| Homo sapiens BAC clone RP11-84F15 from 7, complete sequence
          Length = 128032

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 208   attatttccccctaaaaatg 227
             ||||||||||||||||||||
Sbjct: 12035 attatttccccctaaaaatg 12054

>gb|AC091726.2| Gallus gallus clone WAG-126P17, complete sequence
          Length = 129285

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   tgagcactgattgcagaggg 149
             ||||||||||||||||||||
Sbjct: 58108 tgagcactgattgcagaggg 58127

>gb|AC157993.7| Mus musculus chromosome 1, clone RP23-74E8, complete sequence
          Length = 157271

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   aactaattatttccccctaa 222
             ||||||||||||||||||||
Sbjct: 78284 aactaattatttccccctaa 78303

>gb|AC087231.1|AC087231 Caenorhabditis briggsae cosmid CB034P13, complete sequence
          Length = 71462

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 12    ttgcgaaaacatttatatctttcc 35
             |||||||||||||||| |||||||
Sbjct: 68882 ttgcgaaaacatttatttctttcc 68859

>gb|AC118196.12| Mus musculus chromosome 1, clone RP23-354J2, complete sequence
          Length = 189918

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 203  aactaattatttccccctaa 222
            ||||||||||||||||||||
Sbjct: 8892 aactaattatttccccctaa 8873


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,932,854
Number of Sequences: 3902068
Number of extensions: 2932854
Number of successful extensions: 53911
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53893
Number of HSP's gapped (non-prelim): 18
length of query: 310
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 288
effective length of database: 17,147,199,772
effective search space: 4938393534336
effective search space used: 4938393534336
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)