>INVO_HUMAN (P07476) Involucrin|
          Length = 585

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
 Frame = +3

Query: 36  KNREHGLIHLDLQ-----LKEDIRVQPPFLASQKRQPKTHRPIHGWIQQLTMQQLSITHT 200
           + +E  L HLD Q     L E    Q   L  Q+ QPK      G ++QL  Q+  + H 
Sbjct: 287 EQQEGQLKHLDQQEKQPELPEQQMGQLKHLEQQEGQPKHLEQQEGQLEQLEEQEGQLKHL 346

Query: 201 QQQFIHAQIRHVIKQ 245
           +QQ    Q+ H+  Q
Sbjct: 347 EQQ--EGQLEHLEHQ 359

>LVA_DROME (Q8MSS1) Protein lava lamp|
          Length = 2779

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
 Frame = +3

Query: 72   QLKEDIRVQPPFLASQKRQ-PKTHRPIHGWIQQLTMQQ-LSITHTQQQFIHAQIRHVIKQ 245
            QL+E +RV    +A Q R+   +   +    QQ+   Q L   H ++QF + ++R  +K+
Sbjct: 1026 QLREALRVSKSLVAQQVRELTSSQETVDALNQQIQEYQGLEHAHKEEQFKNRELREKLKK 1085

Query: 246  Y 248
            Y
Sbjct: 1086 Y 1086

>PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (Peroxisome|
           biogenesis disorder protein 1)
          Length = 1283

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 15/66 (22%), Positives = 31/66 (46%), Gaps = 11/66 (16%)
 Frame = +3

Query: 87  IRVQPPFLASQKRQPKTHRP-----------IHGWIQQLTMQQLSITHTQQQFIHAQIRH 233
           + V P    S K QP+ + P            + W+QQ T   L +  ++++FI  + + 
Sbjct: 435 VEVTPKIPRSLKLQPRENLPKDISEEDIKTVFYSWLQQSTTTMLPLVISEEEFIKLETKD 494

Query: 234 VIKQYT 251
            +K+++
Sbjct: 495 GLKEFS 500

>SWC4_KLULA (Q6CSS3) SWR1-complex protein 4|
          Length = 497

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
 Frame = +3

Query: 114 SQKRQPKTHRPIHGWI---QQLTMQQLSITHTQQQFIHAQI 227
           ++KR+P ++ P + W+   QQ   Q+  I H QQQF   QI
Sbjct: 289 NRKRKPDSNTPENPWMKQQQQFAQQRQQIQH-QQQFKQGQI 328

>ASNO_BACSU (O05272) Asparagine synthetase [glutamine-hydrolyzing] 3 (EC|
           6.3.5.4)
          Length = 614

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
 Frame = +3

Query: 39  NREHGLIHLDLQ--LKEDI--RVQPPFLASQKRQPKTHRP-----IHGWIQQLTMQQLSI 191
           NRE G++   L+  L +DI  R + P+       PKTH P     +  W++ +  Q+ S+
Sbjct: 506 NREKGILRKALEGILPDDILYRKKSPY-------PKTHHPEYTKGVSEWLKTIRSQKDSV 558

Query: 192 THT 200
            HT
Sbjct: 559 LHT 561

>E74EA_DROME (P20105) Ecdysone-induced protein 74EF isoform A (ETS-related|
           protein E74A)
          Length = 829

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 15/28 (53%), Positives = 18/28 (64%)
 Frame = +3

Query: 162 QQLTMQQLSITHTQQQFIHAQIRHVIKQ 245
           QQL  QQLS  H QQQ +H Q+ H  +Q
Sbjct: 575 QQLAHQQLS--HQQQQALHQQLSHQQQQ 600

>PHC1_HUMAN (P78364) Polyhomeotic-like protein 1 (hPH1) (Early development|
           regulatory protein 1)
          Length = 1004

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +3

Query: 90  RVQPPFLASQKRQPKTHRPIHGWIQQLTMQQLSITHTQQQFIHAQ 224
           ++QP  L  Q++Q      IH   +Q+ +QQ    H QQQF H Q
Sbjct: 373 QIQPHSLIQQQQQ------IHLQQKQVVIQQQIAIHHQQQFQHRQ 411

>E74EB_DROME (P11536) Ecdysone-induced protein 74EF isoform B (ETS-related|
           protein E74B)
          Length = 883

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 15/28 (53%), Positives = 18/28 (64%)
 Frame = +3

Query: 162 QQLTMQQLSITHTQQQFIHAQIRHVIKQ 245
           QQL  QQLS  H QQQ +H Q+ H  +Q
Sbjct: 629 QQLAHQQLS--HQQQQALHQQLSHQQQQ 654

>PHC1_MOUSE (Q64028) Polyhomeotic-like protein 1 (mPH1) (Early development|
           regulatory protein 1) (RAE-28)
          Length = 1012

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +3

Query: 90  RVQPPFLASQKRQPKTHRPIHGWIQQLTMQQLSITHTQQQFIHAQ 224
           ++QP  L  Q++Q      IH   +Q+ +QQ    H QQQF H Q
Sbjct: 373 QIQPHSLIQQQQQ------IHLQQKQVVIQQQIAIHHQQQFQHRQ 411

>TXND2_MOUSE (Q6P902) Thioredoxin domain-containing protein 2|
           (Spermatid-specific thioredoxin-1) (Sptrx-1)
           (Thioredoxin-4)
          Length = 515

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 17/74 (22%), Positives = 32/74 (43%)
 Frame = +3

Query: 33  RKNREHGLIHLDLQLKEDIRVQPPFLASQKRQPKTHRPIHGWIQQLTMQQLSITHTQQQF 212
           ++   H  +   +Q KE    + P  + Q ++ KTHRP+   +Q    ++   +H   Q 
Sbjct: 274 KEGEVHKPLKDSIQSKETKVPKSPQDSIQSKEDKTHRPLKDSVQSKESEEPKSSHESIQS 333

Query: 213 IHAQIRHVIKQYTP 254
              +I   +K   P
Sbjct: 334 KEDKIHKPLKDSIP 347

>CAF1_EPHMU (P18856) Collagen EMF1-alpha precursor (Fibrillar collagen)|
           (Fragment)
          Length = 547

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 189 ITHTQQQFIHAQIRHVIKQYTPICSNLGA 275
           I+ +Q QFI A  RH ++ +T  C N  A
Sbjct: 448 ISRSQLQFIRAASRHAVQSFTYKCRNSAA 476

>NPHP1_CAEEL (O17972) Nephrocystin-1-like protein (Nephronophthisis homolog)|
          Length = 682

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = +3

Query: 15  NTDFS*RKNREHGLIHLDLQLKEDI--RVQPPFLASQKRQPKTHRPI 149
           N D S   + +  +I  D+QL + +  + QPP    Q+ QPK  +PI
Sbjct: 128 NDDESEDSDNDSEIIETDVQLDDPLPSQPQPPQQQHQQPQPKPRQPI 174


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,283,551
Number of Sequences: 219361
Number of extensions: 864353
Number of successful extensions: 2010
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2002
length of database: 80,573,946
effective HSP length: 112
effective length of database: 56,005,514
effective search space used: 1344132336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)