| Clone Name | rbaet91c06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | DCAM_HORCH (Q42829) S-adenosylmethionine decarboxylase proenzyme... | 48 | 6e-06 | 2 | DCAM_MAIZE (O24575) S-adenosylmethionine decarboxylase proenzyme... | 30 | 1.6 | 3 | DCAM_ORYSA (O24215) S-adenosylmethionine decarboxylase proenzyme... | 28 | 7.9 |
|---|
>DCAM_HORCH (Q42829) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 393 Score = 48.1 bits (113), Expect = 6e-06 Identities = 24/28 (85%), Positives = 26/28 (92%), Gaps = 2/28 (7%) Frame = -2 Query: 284 KEGKLANLLAWRAEEDSLEE--GAVLCE 207 KEGKLANLLAWRAEE+SLEE GA+LCE Sbjct: 366 KEGKLANLLAWRAEEESLEEGTGALLCE 393
>DCAM_MAIZE (O24575) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 400 Score = 30.0 bits (66), Expect = 1.6 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = -2 Query: 284 KEGKLANLLAWRAEEDSLEEGA 219 K+ KLANLL W E D++EE A Sbjct: 374 KDYKLANLLCWEEEADAMEEKA 395
>DCAM_ORYSA (O24215) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 398 Score = 27.7 bits (60), Expect = 7.9 Identities = 14/20 (70%), Positives = 15/20 (75%) Frame = -2 Query: 284 KEGKLANLLAWRAEEDSLEE 225 KEGKL NLL W ED+LEE Sbjct: 374 KEGKLGNLLPW--GEDALEE 391 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 32,750,291 Number of Sequences: 219361 Number of extensions: 470178 Number of successful extensions: 1061 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1054 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1061 length of database: 80,573,946 effective HSP length: 70 effective length of database: 65,218,676 effective search space used: 1565248224 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)