ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet91b11 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X63052.1|HVCP29 Hordeum vulgare gene for CP29 precursor for core chlorophyll a/b binding (CAB) protein of photosystem II (PSII) Length = 2689 Score = 729 bits (368), Expect = 0.0 Identities = 368/368 (100%) Strand = Plus / Minus Query: 1 gaaaacatttgagaaattactcaagtagcagtggtccgaaactcccatcagaaatcagaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2468 gaaaacatttgagaaattactcaagtagcagtggtccgaaactcccatcagaaatcagaa 2409 Query: 61 cggtcatgtttcttctgcccttgataatttacacgtacggcacattcgtactctcatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2408 cggtcatgtttcttctgcccttgataatttacacgtacggcacattcgtactctcatact 2349 Query: 121 tttccccggtaaaattcacacagcacatcatgctgcatcgcacgcacgcatgcagctgag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2348 tttccccggtaaaattcacacagcacatcatgctgcatcgcacgcacgcatgcagctgag 2289 Query: 181 catcaacagccgacggcggcggacgggcaatcaacggccagctcacaggctgggcaccct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2288 catcaacagccgacggcggcggacgggcaatcaacggccagctcacaggctgggcaccct 2229 Query: 241 ctcggcggcgccggagatgacggtgagcaggttgttgccgaaggggtcgctgaggtgggc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2228 ctcggcggcgccggagatgacggtgagcaggttgttgccgaaggggtcgctgaggtgggc 2169 Query: 301 gcacaggttctcgaagggcccctcgccggtgacgtaggcctggatgaagaagcccagcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2168 gcacaggttctcgaagggcccctcgccggtgacgtaggcctggatgaagaagcccagcat 2109 Query: 361 ggagaaca 368 |||||||| Sbjct: 2108 ggagaaca 2101 Score = 123 bits (62), Expect = 4e-25 Identities = 62/62 (100%) Strand = Plus / Minus Query: 1 gaaaacatttgagaaattactcaagtagcagtggtccgaaactcccatcagaaatcagaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2535 gaaaacatttgagaaattactcaagtagcagtggtccgaaactcccatcagaaatcagaa 2476 Query: 61 cg 62 || Sbjct: 2475 cg 2474
>gb|AC135460.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0091I11, complete sequence Length = 135993 Score = 206 bits (104), Expect = 4e-50 Identities = 134/144 (93%) Strand = Plus / Minus Query: 225 acaggctgggcaccctctcggcggcgccggagatgacggtgagcaggttgttgccgaagg 284 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 40261 acaggctgggcgtcctctcggcggcgccggagatgacggtgagcaggttgttgccgaagg 40202 Query: 285 ggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggtgacgtaggcctgga 344 ||||||||||||| | | |||||||||| ||| ||||||||||||||||||||||||| Sbjct: 40201 ggtcgctgaggtgcttggagaggttctcgacggggccctcgccggtgacgtaggcctgga 40142 Query: 345 tgaagaagcccagcatggagaaca 368 ||||||| |||||||||||||||| Sbjct: 40141 tgaagaaccccagcatggagaaca 40118
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 206 bits (104), Expect = 4e-50 Identities = 134/144 (93%) Strand = Plus / Minus Query: 225 acaggctgggcaccctctcggcggcgccggagatgacggtgagcaggttgttgccgaagg 284 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7581175 acaggctgggcgtcctctcggcggcgccggagatgacggtgagcaggttgttgccgaagg 7581116 Query: 285 ggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggtgacgtaggcctgga 344 ||||||||||||| | | |||||||||| ||| ||||||||||||||||||||||||| Sbjct: 7581115 ggtcgctgaggtgcttggagaggttctcgacggggccctcgccggtgacgtaggcctgga 7581056 Query: 345 tgaagaagcccagcatggagaaca 368 ||||||| |||||||||||||||| Sbjct: 7581055 tgaagaaccccagcatggagaaca 7581032
>dbj|AK104824.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-F05, full insert sequence Length = 1157 Score = 206 bits (104), Expect = 4e-50 Identities = 134/144 (93%) Strand = Plus / Minus Query: 225 acaggctgggcaccctctcggcggcgccggagatgacggtgagcaggttgttgccgaagg 284 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 940 acaggctgggcgtcctctcggcggcgccggagatgacggtgagcaggttgttgccgaagg 881 Query: 285 ggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggtgacgtaggcctgga 344 ||||||||||||| | | |||||||||| ||| ||||||||||||||||||||||||| Sbjct: 880 ggtcgctgaggtgcttggagaggttctcgacggggccctcgccggtgacgtaggcctgga 821 Query: 345 tgaagaagcccagcatggagaaca 368 ||||||| |||||||||||||||| Sbjct: 820 tgaagaaccccagcatggagaaca 797
>dbj|AK098872.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001B10, full insert sequence Length = 1101 Score = 206 bits (104), Expect = 4e-50 Identities = 134/144 (93%) Strand = Plus / Minus Query: 225 acaggctgggcaccctctcggcggcgccggagatgacggtgagcaggttgttgccgaagg 284 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 930 acaggctgggcgtcctctcggcggcgccggagatgacggtgagcaggttgttgccgaagg 871 Query: 285 ggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggtgacgtaggcctgga 344 ||||||||||||| | | |||||||||| ||| ||||||||||||||||||||||||| Sbjct: 870 ggtcgctgaggtgcttggagaggttctcgacggggccctcgccggtgacgtaggcctgga 811 Query: 345 tgaagaagcccagcatggagaaca 368 ||||||| |||||||||||||||| Sbjct: 810 tgaagaaccccagcatggagaaca 787
>dbj|AK061295.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D05, full insert sequence Length = 1186 Score = 206 bits (104), Expect = 4e-50 Identities = 134/144 (93%) Strand = Plus / Minus Query: 225 acaggctgggcaccctctcggcggcgccggagatgacggtgagcaggttgttgccgaagg 284 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 941 acaggctgggcgtcctctcggcggcgccggagatgacggtgagcaggttgttgccgaagg 882 Query: 285 ggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggtgacgtaggcctgga 344 ||||||||||||| | | |||||||||| ||| ||||||||||||||||||||||||| Sbjct: 881 ggtcgctgaggtgcttggagaggttctcgacggggccctcgccggtgacgtaggcctgga 822 Query: 345 tgaagaagcccagcatggagaaca 368 ||||||| |||||||||||||||| Sbjct: 821 tgaagaaccccagcatggagaaca 798
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 206 bits (104), Expect = 4e-50 Identities = 134/144 (93%) Strand = Plus / Minus Query: 225 acaggctgggcaccctctcggcggcgccggagatgacggtgagcaggttgttgccgaagg 284 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7651262 acaggctgggcgtcctctcggcggcgccggagatgacggtgagcaggttgttgccgaagg 7651203 Query: 285 ggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggtgacgtaggcctgga 344 ||||||||||||| | | |||||||||| ||| ||||||||||||||||||||||||| Sbjct: 7651202 ggtcgctgaggtgcttggagaggttctcgacggggccctcgccggtgacgtaggcctgga 7651143 Query: 345 tgaagaagcccagcatggagaaca 368 ||||||| |||||||||||||||| Sbjct: 7651142 tgaagaaccccagcatggagaaca 7651119
>dbj|D85512.1| Oryza sativa (japonica cultivar-group) CP26 mRNA, partial sequence Length = 556 Score = 206 bits (104), Expect = 4e-50 Identities = 134/144 (93%) Strand = Plus / Minus Query: 225 acaggctgggcaccctctcggcggcgccggagatgacggtgagcaggttgttgccgaagg 284 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 395 acaggctgggcgtcctctcggcggcgccggagatgacggtgagcaggttgttgccgaagg 336 Query: 285 ggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggtgacgtaggcctgga 344 ||||||||||||| | | |||||||||| ||| ||||||||||||||||||||||||| Sbjct: 335 ggtcgctgaggtgcttggagaggttctcgacggggccctcgccggtgacgtaggcctgga 276 Query: 345 tgaagaagcccagcatggagaaca 368 ||||||| |||||||||||||||| Sbjct: 275 tgaagaaccccagcatggagaaca 252
>gb|AY105650.1| Zea mays PCO135935 mRNA sequence Length = 1366 Score = 180 bits (91), Expect = 2e-42 Identities = 133/147 (90%) Strand = Plus / Minus Query: 222 ctcacaggctgggcaccctctcggcggcgccggagatgacggtgagcaggttgttgccga 281 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1028 ctcacaggctgggcgtcctctcggcggcgccggagatgacggtgagcaggttgttgccga 969 Query: 282 aggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggtgacgtaggcct 341 |||||||||||||||| | |||||||||| ||| || ||||||||||||||||||| Sbjct: 968 aggggtcgctgaggtgcttggcgaggttctcgacggggccttcgccggtgacgtaggcct 909 Query: 342 ggatgaagaagcccagcatggagaaca 368 ||||||||||| | | ||||||||||| Sbjct: 908 ggatgaagaaggcgaacatggagaaca 882
>gb|U23188.1|ZMU23188 Zea mays chlorophyll a/b-binding apoprotein CP26 (Lhcb5-1) mRNA, complete cds Length = 957 Score = 180 bits (91), Expect = 2e-42 Identities = 133/147 (90%) Strand = Plus / Minus Query: 222 ctcacaggctgggcaccctctcggcggcgccggagatgacggtgagcaggttgttgccga 281 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 886 ctcacaggctgggcgtcctctcggcggcgccggagatgacggtgagcaggttgttgccga 827 Query: 282 aggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggtgacgtaggcct 341 |||||||||||||||| | |||||||||| ||| || ||||||||||||||||||| Sbjct: 826 aggggtcgctgaggtgcttggcgaggttctcgacggggccttcgccggtgacgtaggcct 767 Query: 342 ggatgaagaagcccagcatggagaaca 368 ||||||||||| | | ||||||||||| Sbjct: 766 ggatgaagaaggcgaacatggagaaca 740
>gb|U23189.1|ZMU23189 Zea mays chlorophyll a/b-binding apoprotein CP26 (Lhcb5-2) mRNA, complete cds Length = 1073 Score = 159 bits (80), Expect = 8e-36 Identities = 128/144 (88%) Strand = Plus / Minus Query: 225 acaggctgggcaccctctcggcggcgccggagatgacggtgagcaggttgttgccgaagg 284 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 881 acaggctaggcgtcctctcggcggcgccggagatgacggtgagcaggttgttgccgaagg 822 Query: 285 ggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggtgacgtaggcctgga 344 ||||||||||||| | |||||||| | ||| || |||||||||||||||||||||| Sbjct: 821 ggtcgctgaggtgcttggcgaggttctccacggggccttcgccggtgacgtaggcctgga 762 Query: 345 tgaagaagcccagcatggagaaca 368 |||||||| | | ||||||||||| Sbjct: 761 tgaagaaggcgaacatggagaaca 738
>gb|AY855171.1| Eleusine coracana subsp. coracana clone 1 light harvesting protein mRNA, partial cds Length = 364 Score = 143 bits (72), Expect = 5e-31 Identities = 126/144 (87%) Strand = Plus / Minus Query: 225 acaggctgggcaccctctcggcggcgccggagatgacggtgagcaggttgttgccgaagg 284 |||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 193 acaggctgggtgccctctcggcggcaccagagatgacggtgagcaggttgttgccgaagg 134 Query: 285 ggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggtgacgtaggcctgga 344 ||||||||||||| | |||||||||| ||| ||| |||| |||||||||||||||| Sbjct: 133 ggtcgctgaggtgcttggcgaggttctcgacgggacccccgcctgtgacgtaggcctgga 74 Query: 345 tgaagaagcccagcatggagaaca 368 | |||||| | | ||||||||||| Sbjct: 73 taaagaaggcgaacatggagaaca 50 Score = 44.1 bits (22), Expect = 0.31 Identities = 34/38 (89%) Strand = Plus / Minus Query: 80 cttgataatttacacgtacggcacattcgtactctcat 117 |||||||||||||||| |||| |||||| |||||||| Sbjct: 319 cttgataatttacacgcacggtacattcagactctcat 282
>ref|XM_478729.1| Oryza sativa (japonica cultivar-group), mRNA Length = 972 Score = 75.8 bits (38), Expect = 9e-11 Identities = 83/98 (84%) Strand = Plus / Minus Query: 271 gttgttgccgaaggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggt 330 ||||||| ||| ||||||| ||||||| || ||||||||| ||||| |||| |||||| Sbjct: 796 gttgttggcgacggggtcggcgaggtggtcgagcaggttctccaaggggcccttgccggt 737 Query: 331 gacgtaggcctggatgaagaagcccagcatggagaaca 368 |||| |||||||| ||||||||| | ||||||||||| Sbjct: 736 gacgatggcctggacgaagaagccgaacatggagaaca 699
>ref|XM_507374.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 995 Score = 75.8 bits (38), Expect = 9e-11 Identities = 83/98 (84%) Strand = Plus / Minus Query: 271 gttgttgccgaaggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggt 330 ||||||| ||| ||||||| ||||||| || ||||||||| ||||| |||| |||||| Sbjct: 820 gttgttggcgacggggtcggcgaggtggtcgagcaggttctccaaggggcccttgccggt 761 Query: 331 gacgtaggcctggatgaagaagcccagcatggagaaca 368 |||| |||||||| ||||||||| | ||||||||||| Sbjct: 760 gacgatggcctggacgaagaagccgaacatggagaaca 723
>ref|XM_507373.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1007 Score = 75.8 bits (38), Expect = 9e-11 Identities = 83/98 (84%) Strand = Plus / Minus Query: 271 gttgttgccgaaggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggt 330 ||||||| ||| ||||||| ||||||| || ||||||||| ||||| |||| |||||| Sbjct: 820 gttgttggcgacggggtcggcgaggtggtcgagcaggttctccaaggggcccttgccggt 761 Query: 331 gacgtaggcctggatgaagaagcccagcatggagaaca 368 |||| |||||||| ||||||||| | ||||||||||| Sbjct: 760 gacgatggcctggacgaagaagccgaacatggagaaca 723
>ref|XM_507372.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1108 Score = 75.8 bits (38), Expect = 9e-11 Identities = 83/98 (84%) Strand = Plus / Minus Query: 271 gttgttgccgaaggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggt 330 ||||||| ||| ||||||| ||||||| || ||||||||| ||||| |||| |||||| Sbjct: 822 gttgttggcgacggggtcggcgaggtggtcgagcaggttctccaaggggcccttgccggt 763 Query: 331 gacgtaggcctggatgaagaagcccagcatggagaaca 368 |||| |||||||| ||||||||| | ||||||||||| Sbjct: 762 gacgatggcctggacgaagaagccgaacatggagaaca 725
>ref|XM_507371.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1000 Score = 75.8 bits (38), Expect = 9e-11 Identities = 83/98 (84%) Strand = Plus / Minus Query: 271 gttgttgccgaaggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggt 330 ||||||| ||| ||||||| ||||||| || ||||||||| ||||| |||| |||||| Sbjct: 825 gttgttggcgacggggtcggcgaggtggtcgagcaggttctccaaggggcccttgccggt 766 Query: 331 gacgtaggcctggatgaagaagcccagcatggagaaca 368 |||| |||||||| ||||||||| | ||||||||||| Sbjct: 765 gacgatggcctggacgaagaagccgaacatggagaaca 728
>ref|XM_507370.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1012 Score = 75.8 bits (38), Expect = 9e-11 Identities = 83/98 (84%) Strand = Plus / Minus Query: 271 gttgttgccgaaggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggt 330 ||||||| ||| ||||||| ||||||| || ||||||||| ||||| |||| |||||| Sbjct: 825 gttgttggcgacggggtcggcgaggtggtcgagcaggttctccaaggggcccttgccggt 766 Query: 331 gacgtaggcctggatgaagaagcccagcatggagaaca 368 |||| |||||||| ||||||||| | ||||||||||| Sbjct: 765 gacgatggcctggacgaagaagccgaacatggagaaca 728
>ref|XM_507369.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1032 Score = 75.8 bits (38), Expect = 9e-11 Identities = 83/98 (84%) Strand = Plus / Minus Query: 271 gttgttgccgaaggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggt 330 ||||||| ||| ||||||| ||||||| || ||||||||| ||||| |||| |||||| Sbjct: 827 gttgttggcgacggggtcggcgaggtggtcgagcaggttctccaaggggcccttgccggt 768 Query: 331 gacgtaggcctggatgaagaagcccagcatggagaaca 368 |||| |||||||| ||||||||| | ||||||||||| Sbjct: 767 gacgatggcctggacgaagaagccgaacatggagaaca 730
>ref|XM_506410.2| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1159 Score = 75.8 bits (38), Expect = 9e-11 Identities = 83/98 (84%) Strand = Plus / Minus Query: 271 gttgttgccgaaggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggt 330 ||||||| ||| ||||||| ||||||| || ||||||||| ||||| |||| |||||| Sbjct: 860 gttgttggcgacggggtcggcgaggtggtcgagcaggttctccaaggggcccttgccggt 801 Query: 331 gacgtaggcctggatgaagaagcccagcatggagaaca 368 |||| |||||||| ||||||||| | ||||||||||| Sbjct: 800 gacgatggcctggacgaagaagccgaacatggagaaca 763
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 75.8 bits (38), Expect = 9e-11 Identities = 83/98 (84%) Strand = Plus / Minus Query: 271 gttgttgccgaaggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggt 330 ||||||| ||| ||||||| ||||||| || ||||||||| ||||| |||| |||||| Sbjct: 22434833 gttgttggcgacggggtcggcgaggtggtcgagcaggttctccaaggggcccttgccggt 22434774 Query: 331 gacgtaggcctggatgaagaagcccagcatggagaaca 368 |||| |||||||| ||||||||| | ||||||||||| Sbjct: 22434773 gacgatggcctggacgaagaagccgaacatggagaaca 22434736
>dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0406F06 Length = 144533 Score = 75.8 bits (38), Expect = 9e-11 Identities = 83/98 (84%) Strand = Plus / Minus Query: 271 gttgttgccgaaggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggt 330 ||||||| ||| ||||||| ||||||| || ||||||||| ||||| |||| |||||| Sbjct: 95900 gttgttggcgacggggtcggcgaggtggtcgagcaggttctccaaggggcccttgccggt 95841 Query: 331 gacgtaggcctggatgaagaagcccagcatggagaaca 368 |||| |||||||| ||||||||| | ||||||||||| Sbjct: 95840 gacgatggcctggacgaagaagccgaacatggagaaca 95803
>dbj|AK109399.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C08, full insert sequence Length = 1111 Score = 75.8 bits (38), Expect = 9e-11 Identities = 83/98 (84%) Strand = Plus / Minus Query: 271 gttgttgccgaaggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggt 330 ||||||| ||| ||||||| ||||||| || ||||||||| ||||| |||| |||||| Sbjct: 825 gttgttggcgacggggtcggcgaggtggtcgagcaggttctccaaggggcccttgccggt 766 Query: 331 gacgtaggcctggatgaagaagcccagcatggagaaca 368 |||| |||||||| ||||||||| | ||||||||||| Sbjct: 765 gacgatggcctggacgaagaagccgaacatggagaaca 728
>dbj|AK119545.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-G05, full insert sequence Length = 1012 Score = 75.8 bits (38), Expect = 9e-11 Identities = 83/98 (84%) Strand = Plus / Minus Query: 271 gttgttgccgaaggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggt 330 ||||||| ||| ||||||| ||||||| || ||||||||| ||||| |||| |||||| Sbjct: 825 gttgttggcgacggggtcggcgaggtggtcgagcaggttctccaaggggcccttgccggt 766 Query: 331 gacgtaggcctggatgaagaagcccagcatggagaaca 368 |||| |||||||| ||||||||| | ||||||||||| Sbjct: 765 gacgatggcctggacgaagaagccgaacatggagaaca 728
>dbj|AK119533.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F03, full insert sequence Length = 1000 Score = 75.8 bits (38), Expect = 9e-11 Identities = 83/98 (84%) Strand = Plus / Minus Query: 271 gttgttgccgaaggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggt 330 ||||||| ||| ||||||| ||||||| || ||||||||| ||||| |||| |||||| Sbjct: 825 gttgttggcgacggggtcggcgaggtggtcgagcaggttctccaaggggcccttgccggt 766 Query: 331 gacgtaggcctggatgaagaagcccagcatggagaaca 368 |||| |||||||| ||||||||| | ||||||||||| Sbjct: 765 gacgatggcctggacgaagaagccgaacatggagaaca 728
>dbj|AK104495.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C03, full insert sequence Length = 973 Score = 75.8 bits (38), Expect = 9e-11 Identities = 83/98 (84%) Strand = Plus / Minus Query: 271 gttgttgccgaaggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggt 330 ||||||| ||| ||||||| ||||||| || ||||||||| ||||| |||| |||||| Sbjct: 796 gttgttggcgacggggtcggcgaggtggtcgagcaggttctccaaggggcccttgccggt 737 Query: 331 gacgtaggcctggatgaagaagcccagcatggagaaca 368 |||| |||||||| ||||||||| | ||||||||||| Sbjct: 736 gacgatggcctggacgaagaagccgaacatggagaaca 699
>dbj|AK104465.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C07, full insert sequence Length = 1012 Score = 75.8 bits (38), Expect = 9e-11 Identities = 83/98 (84%) Strand = Plus / Minus Query: 271 gttgttgccgaaggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggt 330 ||||||| ||| ||||||| ||||||| || ||||||||| ||||| |||| |||||| Sbjct: 825 gttgttggcgacggggtcggcgaggtggtcgagcaggttctccaaggggcccttgccggt 766 Query: 331 gacgtaggcctggatgaagaagcccagcatggagaaca 368 |||| |||||||| ||||||||| | ||||||||||| Sbjct: 765 gacgatggcctggacgaagaagccgaacatggagaaca 728
>dbj|AK104224.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-E11, full insert sequence Length = 995 Score = 75.8 bits (38), Expect = 9e-11 Identities = 83/98 (84%) Strand = Plus / Minus Query: 271 gttgttgccgaaggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggt 330 ||||||| ||| ||||||| ||||||| || ||||||||| ||||| |||| |||||| Sbjct: 820 gttgttggcgacggggtcggcgaggtggtcgagcaggttctccaaggggcccttgccggt 761 Query: 331 gacgtaggcctggatgaagaagcccagcatggagaaca 368 |||| |||||||| ||||||||| | ||||||||||| Sbjct: 760 gacgatggcctggacgaagaagccgaacatggagaaca 723
>dbj|AK103999.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-D10, full insert sequence Length = 1007 Score = 75.8 bits (38), Expect = 9e-11 Identities = 83/98 (84%) Strand = Plus / Minus Query: 271 gttgttgccgaaggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggt 330 ||||||| ||| ||||||| ||||||| || ||||||||| ||||| |||| |||||| Sbjct: 820 gttgttggcgacggggtcggcgaggtggtcgagcaggttctccaaggggcccttgccggt 761 Query: 331 gacgtaggcctggatgaagaagcccagcatggagaaca 368 |||| |||||||| ||||||||| | ||||||||||| Sbjct: 760 gacgatggcctggacgaagaagccgaacatggagaaca 723
>dbj|AK103926.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D02, full insert sequence Length = 1000 Score = 75.8 bits (38), Expect = 9e-11 Identities = 83/98 (84%) Strand = Plus / Minus Query: 271 gttgttgccgaaggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggt 330 ||||||| ||| ||||||| ||||||| || ||||||||| ||||| |||| |||||| Sbjct: 825 gttgttggcgacggggtcggcgaggtggtcgagcaggttctccaaggggcccttgccggt 766 Query: 331 gacgtaggcctggatgaagaagcccagcatggagaaca 368 |||| |||||||| ||||||||| | ||||||||||| Sbjct: 765 gacgatggcctggacgaagaagccgaacatggagaaca 728
>dbj|AK061512.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-G12, full insert sequence Length = 1032 Score = 75.8 bits (38), Expect = 9e-11 Identities = 83/98 (84%) Strand = Plus / Minus Query: 271 gttgttgccgaaggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggt 330 ||||||| ||| ||||||| ||||||| || ||||||||| ||||| |||| |||||| Sbjct: 827 gttgttggcgacggggtcggcgaggtggtcgagcaggttctccaaggggcccttgccggt 768 Query: 331 gacgtaggcctggatgaagaagcccagcatggagaaca 368 |||| |||||||| ||||||||| | ||||||||||| Sbjct: 767 gacgatggcctggacgaagaagccgaacatggagaaca 730
>gb|AC135564.4| Oryza sativa chromosome 3 BAC OSJNBb0056O10 genomic sequence, complete sequence Length = 139771 Score = 67.9 bits (34), Expect = 2e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 271 gttgttgccgaaggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggt 330 ||||||| ||| ||||||| || |||| || | |||||||||| ||| |||| |||||| Sbjct: 79011 gttgttggcgacggggtcggcgacgtggtcgaagaggttctcgatggggcccttgccggt 79070 Query: 331 gacgtaggcctggatgaagaagcccagcatggagaaca 368 |||| |||||||| ||||||||| | ||||||||||| Sbjct: 79071 gacgatggcctggacgaagaagccgaacatggagaaca 79108
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 67.9 bits (34), Expect = 2e-08 Identities = 82/98 (83%) Strand = Plus / Minus Query: 271 gttgttgccgaaggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggt 330 ||||||| ||| ||||||| || |||| || | |||||||||| ||| |||| |||||| Sbjct: 21808805 gttgttggcgacggggtcggcgacgtggtcgaagaggttctcgatggggcccttgccggt 21808746 Query: 331 gacgtaggcctggatgaagaagcccagcatggagaaca 368 |||| |||||||| ||||||||| | ||||||||||| Sbjct: 21808745 gacgatggcctggacgaagaagccgaacatggagaaca 21808708
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 67.9 bits (34), Expect = 2e-08 Identities = 82/98 (83%) Strand = Plus / Minus Query: 271 gttgttgccgaaggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggt 330 ||||||| ||| ||||||| || |||| || | |||||||||| ||| |||| |||||| Sbjct: 21801834 gttgttggcgacggggtcggcgacgtggtcgaagaggttctcgatggggcccttgccggt 21801775 Query: 331 gacgtaggcctggatgaagaagcccagcatggagaaca 368 |||| |||||||| ||||||||| | ||||||||||| Sbjct: 21801774 gacgatggcctggacgaagaagccgaacatggagaaca 21801737
>dbj|AK068972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001G03, full insert sequence Length = 1107 Score = 67.9 bits (34), Expect = 2e-08 Identities = 82/98 (83%) Strand = Plus / Minus Query: 271 gttgttgccgaaggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggt 330 ||||||| ||| ||||||| ||||||| || ||||||||| ||||| |||| |||||| Sbjct: 821 gttgttggcgacggggtcggcgaggtggtcgagcaggttctccaaggggcccttgccggt 762 Query: 331 gacgtaggcctggatgaagaagcccagcatggagaaca 368 |||| || ||||| ||||||||| | ||||||||||| Sbjct: 761 gacgatggtctggacgaagaagccgaacatggagaaca 724
>dbj|AK066762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075I09, full insert sequence Length = 1106 Score = 67.9 bits (34), Expect = 2e-08 Identities = 82/98 (83%) Strand = Plus / Minus Query: 271 gttgttgccgaaggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggt 330 ||||||| ||| ||||||| || |||| || | |||||||||| ||| |||| |||||| Sbjct: 804 gttgttggcgacggggtcggcgacgtggtcgaagaggttctcgatggggcccttgccggt 745 Query: 331 gacgtaggcctggatgaagaagcccagcatggagaaca 368 |||| |||||||| ||||||||| | ||||||||||| Sbjct: 744 gacgatggcctggacgaagaagccgaacatggagaaca 707
>dbj|AK058315.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-A06, full insert sequence Length = 685 Score = 67.9 bits (34), Expect = 2e-08 Identities = 82/98 (83%) Strand = Plus / Minus Query: 271 gttgttgccgaaggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggt 330 ||||||| ||| ||||||| || |||| || | |||||||||| ||| |||| |||||| Sbjct: 379 gttgttggcgacggggtcggcgacgtggtcgaagaggttctcgatggggcccttgccggt 320 Query: 331 gacgtaggcctggatgaagaagcccagcatggagaaca 368 |||| |||||||| ||||||||| | ||||||||||| Sbjct: 319 gacgatggcctggacgaagaagccgaacatggagaaca 282
>dbj|AK058312.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H12, full insert sequence Length = 1040 Score = 67.9 bits (34), Expect = 2e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 283 ggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggtgacgtaggcctg 342 ||||||| ||||||| || ||||||||| ||||| |||| |||||||||| |||||| Sbjct: 813 ggggtcggcgaggtggtcgagcaggttctccaaggggcccttgccggtgacgatggcctg 754 Query: 343 gatgaagaagcccagcatggagaaca 368 || ||||||||| | ||||||||||| Sbjct: 753 gacgaagaagccgaacatggagaaca 728
>gb|AF061577.1|AF061577 Oryza sativa chlorophyll a/b binding protein (RCABP89) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1027 Score = 67.9 bits (34), Expect = 2e-08 Identities = 82/98 (83%) Strand = Plus / Minus Query: 271 gttgttgccgaaggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggt 330 ||||||| ||| ||||||| || |||| || | |||||||||| ||| |||| |||||| Sbjct: 793 gttgttggcgacggggtcggcgacgtggtcgaagaggttctcgatggggcccttgccggt 734 Query: 331 gacgtaggcctggatgaagaagcccagcatggagaaca 368 |||| |||||||| ||||||||| | ||||||||||| Sbjct: 733 gacgatggcctggacgaagaagccgaacatggagaaca 696
>dbj|D00642.1|RICLHCP2 Oryza sativa (japonica cultivar-group) mRNA for type II light-harvesting chlorophyll a/b binding protein of photosystem II (LHCPII), complete cds Length = 989 Score = 67.9 bits (34), Expect = 2e-08 Identities = 82/98 (83%) Strand = Plus / Minus Query: 271 gttgttgccgaaggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggt 330 ||||||| ||| ||||||| ||| |||| || | |||||||||| ||| |||| |||||| Sbjct: 785 gttgttggcgacggggtcggtgacgtggtcgaagaggttctcgatggggcccttgccggt 726 Query: 331 gacgtaggcctggatgaagaagcccagcatggagaaca 368 |||| |||||||| |||||| || | ||||||||||| Sbjct: 725 gacgatggcctggacgaagaatccgaacatggagaaca 688
>ref|NM_192636.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 789 Score = 63.9 bits (32), Expect = 3e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 305 aggttctcgaagggcccctcgccggtgacgtaggcctggatgaagaagcccagcatggag 364 |||||||||| ||| |||| |||||||||| |||||||| ||||||||| | ||||||| Sbjct: 713 aggttctcgagggggcccttgccggtgacgatggcctggacgaagaagccgaacatggag 654 Query: 365 aaca 368 |||| Sbjct: 653 aaca 650
>emb|X13908.1|OSCABR1 Rice cab1R gene for light harvesting chlorophyll a/b-binding protein Length = 1664 Score = 63.9 bits (32), Expect = 3e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 305 aggttctcgaagggcccctcgccggtgacgtaggcctggatgaagaagcccagcatggag 364 |||||||||| ||| |||| |||||||||| |||||||| ||||||||| | ||||||| Sbjct: 1174 aggttctcgagggggcccttgccggtgacgatggcctggacgaagaagccgaacatggag 1115 Query: 365 aaca 368 |||| Sbjct: 1114 aaca 1111
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 63.9 bits (32), Expect = 3e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 305 aggttctcgaagggcccctcgccggtgacgtaggcctggatgaagaagcccagcatggag 364 |||||||||| ||| |||| |||||||||| |||||||| ||||||||| | ||||||| Sbjct: 10793709 aggttctcgagggggcccttgccggtgacgatggcctggacgaagaagccgaacatggag 10793650 Query: 365 aaca 368 |||| Sbjct: 10793649 aaca 10793646
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 63.9 bits (32), Expect = 3e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 305 aggttctcgaagggcccctcgccggtgacgtaggcctggatgaagaagcccagcatggag 364 |||||||||| ||| |||| |||||||||| |||||||| ||||||||| | ||||||| Sbjct: 23604256 aggttctcgagggggcccttgccggtgacgatggcctggacgaagaagccgaacatggag 23604197 Query: 365 aaca 368 |||| Sbjct: 23604196 aaca 23604193 Score = 52.0 bits (26), Expect = 0.001 Identities = 71/86 (82%) Strand = Plus / Minus Query: 283 ggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggtgacgtaggcctg 342 ||||||| ||||||| || ||||||||| | ||||||| |||||||||| |||||| Sbjct: 30025084 ggggtcggcgaggtggtcggccaggttctccagtggccccttgccggtgacgatggcctg 30025025 Query: 343 gatgaagaagcccagcatggagaaca 368 || |||||| || | ||||||||||| Sbjct: 30025024 gacgaagaacccgaacatggagaaca 30024999
>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0512H04 Length = 151049 Score = 63.9 bits (32), Expect = 3e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 305 aggttctcgaagggcccctcgccggtgacgtaggcctggatgaagaagcccagcatggag 364 |||||||||| ||| |||| |||||||||| |||||||| ||||||||| | ||||||| Sbjct: 17432 aggttctcgagggggcccttgccggtgacgatggcctggacgaagaagccgaacatggag 17373 Query: 365 aaca 368 |||| Sbjct: 17372 aaca 17369
>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518F01 Length = 154541 Score = 63.9 bits (32), Expect = 3e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 305 aggttctcgaagggcccctcgccggtgacgtaggcctggatgaagaagcccagcatggag 364 |||||||||| ||| |||| |||||||||| |||||||| ||||||||| | ||||||| Sbjct: 66955 aggttctcgagggggcccttgccggtgacgatggcctggacgaagaagccgaacatggag 66896 Query: 365 aaca 368 |||| Sbjct: 66895 aaca 66892
>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0085I16 Length = 141701 Score = 63.9 bits (32), Expect = 3e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 305 aggttctcgaagggcccctcgccggtgacgtaggcctggatgaagaagcccagcatggag 364 |||||||||| ||| |||| |||||||||| |||||||| ||||||||| | ||||||| Sbjct: 130327 aggttctcgagggggcccttgccggtgacgatggcctggacgaagaagccgaacatggag 130268 Query: 365 aaca 368 |||| Sbjct: 130267 aaca 130264
>dbj|AK121563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034J10, full insert sequence Length = 1180 Score = 63.9 bits (32), Expect = 3e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 305 aggttctcgaagggcccctcgccggtgacgtaggcctggatgaagaagcccagcatggag 364 |||||||||| ||| |||| |||||||||| |||||||| ||||||||| | ||||||| Sbjct: 784 aggttctcgagggggcccttgccggtgacgatggcctggacgaagaagccgaacatggag 725 Query: 365 aaca 368 |||| Sbjct: 724 aaca 721
>dbj|AK119173.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B06, full insert sequence Length = 1126 Score = 63.9 bits (32), Expect = 3e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 305 aggttctcgaagggcccctcgccggtgacgtaggcctggatgaagaagcccagcatggag 364 |||||||||| ||| |||| |||||||||| |||||||| ||||||||| | ||||||| Sbjct: 783 aggttctcgagggggcccttgccggtgacgatggcctggacgaagaagccgaacatggag 724 Query: 365 aaca 368 |||| Sbjct: 723 aaca 720
>emb|X13909.1|OSCABR2 Rice cab2R gene for light harvesting chlorophyll a/b-binding protein Length = 1442 Score = 63.9 bits (32), Expect = 3e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 305 aggttctcgaagggcccctcgccggtgacgtaggcctggatgaagaagcccagcatggag 364 |||||||||| ||| |||| |||||||||| |||||||| ||||||||| | ||||||| Sbjct: 1213 aggttctcgagggggcccttgccggtgacgatggcctggacgaagaagccgaacatggag 1154 Query: 365 aaca 368 |||| Sbjct: 1153 aaca 1150
>dbj|AK104350.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-G02, full insert sequence Length = 1013 Score = 63.9 bits (32), Expect = 3e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 305 aggttctcgaagggcccctcgccggtgacgtaggcctggatgaagaagcccagcatggag 364 |||||||||| ||| |||| |||||||||| |||||||| ||||||||| | ||||||| Sbjct: 777 aggttctcgagggggcccttgccggtgacgatggcctggacgaagaagccgaacatggag 718 Query: 365 aaca 368 |||| Sbjct: 717 aaca 714
>dbj|AK104288.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-E05, full insert sequence Length = 1021 Score = 63.9 bits (32), Expect = 3e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 305 aggttctcgaagggcccctcgccggtgacgtaggcctggatgaagaagcccagcatggag 364 |||||||||| ||| |||| |||||||||| |||||||| ||||||||| | ||||||| Sbjct: 782 aggttctcgagggggcccttgccggtgacgatggcctggacgaagaagccgaacatggag 723 Query: 365 aaca 368 |||| Sbjct: 722 aaca 719
>dbj|AK104281.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-D01, full insert sequence Length = 1056 Score = 63.9 bits (32), Expect = 3e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 305 aggttctcgaagggcccctcgccggtgacgtaggcctggatgaagaagcccagcatggag 364 |||||||||| ||| |||| |||||||||| |||||||| ||||||||| | ||||||| Sbjct: 784 aggttctcgagggggcccttgccggtgacgatggcctggacgaagaagccgaacatggag 725 Query: 365 aaca 368 |||| Sbjct: 724 aaca 721
>dbj|AK060851.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E08, full insert sequence Length = 1235 Score = 63.9 bits (32), Expect = 3e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 305 aggttctcgaagggcccctcgccggtgacgtaggcctggatgaagaagcccagcatggag 364 |||||||||| ||| |||| |||||||||| |||||||| ||||||||| | ||||||| Sbjct: 782 aggttctcgagggggcccttgccggtgacgatggcctggacgaagaagccgaacatggag 723 Query: 365 aaca 368 |||| Sbjct: 722 aaca 719
>dbj|AK058305.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H02, full insert sequence Length = 1045 Score = 63.9 bits (32), Expect = 3e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 305 aggttctcgaagggcccctcgccggtgacgtaggcctggatgaagaagcccagcatggag 364 |||||||||| ||| |||| |||||||||| |||||||| ||||||||| | ||||||| Sbjct: 782 aggttctcgagggggcccttgccggtgacgatggcctggacgaagaagccgaacatggag 723 Query: 365 aaca 368 |||| Sbjct: 722 aaca 719
>dbj|D00641.1|RICLHCP1 Oryza sativa (japonica cultivar-group) mRNA for type I light-harvesting chlorophyll a/b binding protein of photosystem II (LHCPII), complete cds Length = 1022 Score = 63.9 bits (32), Expect = 3e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 305 aggttctcgaagggcccctcgccggtgacgtaggcctggatgaagaagcccagcatggag 364 |||||||||| ||| |||| |||||||||| |||||||| ||||||||| | ||||||| Sbjct: 763 aggttctcgagggggcccttgccggtgacgatggcctggacgaagaagccgaacatggag 704 Query: 365 aaca 368 |||| Sbjct: 703 aaca 700
>emb|X68682.1|ZMLHCB Z.mays mRNA for type II light-harvesting chlorophyll a/b-binding protein Length = 1126 Score = 60.0 bits (30), Expect = 5e-06 Identities = 81/98 (82%) Strand = Plus / Minus Query: 271 gttgttgccgaaggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggt 330 ||||||| ||| ||||||| || |||| || | |||||||||| ||| |||| |||||| Sbjct: 789 gttgttggcgacggggtcggcgacgtggtcgaagaggttctcgatggggcccttgccggt 730 Query: 331 gacgtaggcctggatgaagaagcccagcatggagaaca 368 |||| |||||| | ||||||||| | ||||||||||| Sbjct: 729 gacgatggcctgcacgaagaagccgaacatggagaaca 692
>gb|AY112240.1| Zea mays CL187_6 mRNA sequence Length = 770 Score = 60.0 bits (30), Expect = 5e-06 Identities = 81/98 (82%) Strand = Plus / Minus Query: 271 gttgttgccgaaggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggt 330 ||||||| ||| ||||||| || |||| || | |||||||||| ||| |||| |||||| Sbjct: 437 gttgttggcgacggggtcggcgacgtggtcgaagaggttctcgatggggcccttgccggt 378 Query: 331 gacgtaggcctggatgaagaagcccagcatggagaaca 368 |||| |||||| | ||||||||| | ||||||||||| Sbjct: 377 gacgatggcctgcacgaagaagccgaacatggagaaca 340
>gb|AF022739.1|AF022739 Oryza sativa chlorophyll a-b binding protein mRNA, complete cds Length = 1100 Score = 60.0 bits (30), Expect = 5e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 307 gttctcgaagggcccctcgccggtgacgtaggcctggatgaagaagcccagcatggagaa 366 |||||||| ||| |||| |||||||||| |||||||| |||||| |||| ||||||||| Sbjct: 764 gttctcgatggggcccttgccggtgacgatggcctggacgaagaaacccaacatggagaa 705 Query: 367 ca 368 || Sbjct: 704 ca 703
>gb|M12152.1|LGIAB19A Lemna gibba chlorophyll a/b apoprotein gene, complete cds Length = 1913 Score = 60.0 bits (30), Expect = 5e-06 Identities = 81/98 (82%) Strand = Plus / Minus Query: 271 gttgttgccgaaggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggt 330 ||||||| ||| ||||||| || |||| || ||||||||||| ||| |||| |||||| Sbjct: 1495 gttgttggcgacggggtcggcgatgtggtcggccaggttctcgatggggcccttgccggt 1436 Query: 331 gacgtaggcctggatgaagaagcccagcatggagaaca 368 |||| |||||| | ||||||||| | ||||||||||| Sbjct: 1435 gacgatggcctgaacgaagaagccgaacatggagaaca 1398
>gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds Length = 1044 Score = 56.0 bits (28), Expect = 8e-05 Identities = 55/64 (85%) Strand = Plus / Minus Query: 305 aggttctcgaagggcccctcgccggtgacgtaggcctggatgaagaagcccagcatggag 364 |||||||||| ||| |||| |||||||||| |||||| | ||||||||| | ||||||| Sbjct: 791 aggttctcgagggggcccttgccggtgacgatggcctgcacgaagaagccgaacatggag 732 Query: 365 aaca 368 |||| Sbjct: 731 aaca 728
>gb|AF079590.1|AF079590 Sorghum bicolor photosystem II type II chlorophyll a/b binding protein (CABII) mRNA, partial cds Length = 714 Score = 56.0 bits (28), Expect = 8e-05 Identities = 55/64 (85%) Strand = Plus / Minus Query: 305 aggttctcgaagggcccctcgccggtgacgtaggcctggatgaagaagcccagcatggag 364 |||||||||| ||| |||| |||||||||| |||||||| |||||| || | ||||||| Sbjct: 505 aggttctcgatgggtcccttgccggtgacgatggcctggacgaagaacccaaacatggag 446 Query: 365 aaca 368 |||| Sbjct: 445 aaca 442
>ref|NM_191799.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 798 Score = 52.0 bits (26), Expect = 0.001 Identities = 71/86 (82%) Strand = Plus / Minus Query: 283 ggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggtgacgtaggcctg 342 ||||||| ||||||| || ||||||||| | ||||||| |||||||||| |||||| Sbjct: 747 ggggtcggcgaggtggtcggccaggttctccagtggccccttgccggtgacgatggcctg 688 Query: 343 gatgaagaagcccagcatggagaaca 368 || |||||| || | ||||||||||| Sbjct: 687 gacgaagaacccgaacatggagaaca 662
>gb|AY100470.1| Oryza sativa (indica cultivar-group) putative soluble starch synthase IV-1 gene, complete cds Length = 15000 Score = 52.0 bits (26), Expect = 0.001 Identities = 71/86 (82%) Strand = Plus / Plus Query: 283 ggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggtgacgtaggcctg 342 ||||||| ||||||| || ||||||||| | ||||||| |||||||||| |||||| Sbjct: 13927 ggggtcggcgaggtggtcggccaggttctccagtggccccttgccggtgacgatggcctg 13986 Query: 343 gatgaagaagcccagcatggagaaca 368 || |||||| || | ||||||||||| Sbjct: 13987 gacgaagaacccgaacatggagaaca 14012
>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0690B02 Length = 153116 Score = 52.0 bits (26), Expect = 0.001 Identities = 71/86 (82%) Strand = Plus / Minus Query: 283 ggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggtgacgtaggcctg 342 ||||||| ||||||| || ||||||||| | ||||||| |||||||||| |||||| Sbjct: 21074 ggggtcggcgaggtggtcggccaggttctccagtggccccttgccggtgacgatggcctg 21015 Query: 343 gatgaagaagcccagcatggagaaca 368 || |||||| || | ||||||||||| Sbjct: 21014 gacgaagaacccgaacatggagaaca 20989
>emb|X63205.1|ZMCAB48 Zea mays cab48 gene for chlorophyll a/b binding protein precursor Length = 2780 Score = 52.0 bits (26), Expect = 0.001 Identities = 71/86 (82%) Strand = Plus / Minus Query: 283 ggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggtgacgtaggcctg 342 ||||||| |||||||| || |||||||||| ||| |||| |||||||||| ||||| Sbjct: 2670 ggggtcggtgaggtggtcggcgaggttctcgatggggcccttgccggtgacgatagcctg 2611 Query: 343 gatgaagaagcccagcatggagaaca 368 | ||||||||| | ||||||||||| Sbjct: 2610 cacgaagaagccgaacatggagaaca 2585
>dbj|AK104176.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C12, full insert sequence Length = 1055 Score = 52.0 bits (26), Expect = 0.001 Identities = 71/86 (82%) Strand = Plus / Minus Query: 283 ggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggtgacgtaggcctg 342 ||||||| ||||||| || ||||||||| | ||||||| |||||||||| |||||| Sbjct: 828 ggggtcggcgaggtggtcggccaggttctccagtggccccttgccggtgacgatggcctg 769 Query: 343 gatgaagaagcccagcatggagaaca 368 || |||||| || | ||||||||||| Sbjct: 768 gacgaagaacccgaacatggagaaca 743
>dbj|AK103946.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B02, full insert sequence Length = 1055 Score = 52.0 bits (26), Expect = 0.001 Identities = 71/86 (82%) Strand = Plus / Minus Query: 283 ggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggtgacgtaggcctg 342 ||||||| ||||||| || ||||||||| | ||||||| |||||||||| |||||| Sbjct: 828 ggggtcggcgaggtggtcggccaggttctccagtggccccttgccggtgacgatggcctg 769 Query: 343 gatgaagaagcccagcatggagaaca 368 || |||||| || | ||||||||||| Sbjct: 768 gacgaagaacccgaacatggagaaca 743
>dbj|AK062725.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-D08, full insert sequence Length = 1057 Score = 52.0 bits (26), Expect = 0.001 Identities = 71/86 (82%) Strand = Plus / Minus Query: 283 ggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggtgacgtaggcctg 342 ||||||| ||||||| || ||||||||| | ||||||| |||||||||| |||||| Sbjct: 830 ggggtcggcgaggtggtcggccaggttctccagtggccccttgccggtgacgatggcctg 771 Query: 343 gatgaagaagcccagcatggagaaca 368 || |||||| || | ||||||||||| Sbjct: 770 gacgaagaacccgaacatggagaaca 745
>dbj|AK058289.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E06, full insert sequence Length = 1057 Score = 52.0 bits (26), Expect = 0.001 Identities = 71/86 (82%) Strand = Plus / Minus Query: 283 ggggtcgctgaggtgggcgcacaggttctcgaagggcccctcgccggtgacgtaggcctg 342 ||||||| ||||||| || ||||||||| | ||||||| |||||||||| |||||| Sbjct: 830 ggggtcggcgaggtggtcggccaggttctccagtggccccttgccggtgacgatggcctg 771 Query: 343 gatgaagaagcccagcatggagaaca 368 || |||||| || | ||||||||||| Sbjct: 770 gacgaagaacccgaacatggagaaca 745
>gb|BT014450.1| Lycopersicon esculentum clone 133776F, mRNA sequence Length = 1196 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Minus Query: 256 gatgacggtgagcaggttgttgccgaaggggtc 288 |||||||||||||| ||||||||| |||||||| Sbjct: 907 gatgacggtgagcaagttgttgccaaaggggtc 875
>gb|AF479779.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m7 (Lhcbm7) mRNA, complete cds Length = 1016 Score = 50.1 bits (25), Expect = 0.005 Identities = 55/65 (84%) Strand = Plus / Minus Query: 304 caggttctcgaagggcccctcgccggtgacgtaggcctggatgaagaagcccagcatgga 363 |||||||| || ||| |||| |||||| ||| |||||||| ||||||||| | |||||| Sbjct: 719 caggttctggatggggcccttgccggtcacgatggcctggacgaagaagccgaacatgga 660 Query: 364 gaaca 368 ||||| Sbjct: 659 gaaca 655
>gb|AF479777.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m10 (Lhcbm10) mRNA, complete cds Length = 1077 Score = 50.1 bits (25), Expect = 0.005 Identities = 55/65 (84%) Strand = Plus / Minus Query: 304 caggttctcgaagggcccctcgccggtgacgtaggcctggatgaagaagcccagcatgga 363 |||||||| || ||| |||| |||||| ||| |||||||| ||||||||| | |||||| Sbjct: 720 caggttctggatggggcccttgccggtcacgatggcctggacgaagaagccgaacatgga 661 Query: 364 gaaca 368 ||||| Sbjct: 660 gaaca 656
>gb|DQ122900.1| Chlamydomonas incerta chloroplast light-harvesting chlorophyll-a/b binding protein (LhcII-1.3) mRNA, complete cds; nuclear gene for chloroplast product Length = 1100 Score = 50.1 bits (25), Expect = 0.005 Identities = 55/65 (84%) Strand = Plus / Minus Query: 304 caggttctcgaagggcccctcgccggtgacgtaggcctggatgaagaagcccagcatgga 363 |||||||| || ||| |||| |||||| ||| |||||||| ||||||||| | |||||| Sbjct: 714 caggttctggacggggcccttgccggtcacgatggcctggacgaagaagccgaacatgga 655 Query: 364 gaaca 368 ||||| Sbjct: 654 gaaca 650
>gb|AF330793.1|AF330793 Chlamydomonas reinhardtii light-harvesting complex II protein precursor (cabII-2) mRNA, complete cds Length = 1068 Score = 50.1 bits (25), Expect = 0.005 Identities = 55/65 (84%) Strand = Plus / Minus Query: 304 caggttctcgaagggcccctcgccggtgacgtaggcctggatgaagaagcccagcatgga 363 |||||||| || ||| |||| |||||| ||| |||||||| ||||||||| | |||||| Sbjct: 702 caggttctggatggggcccttgccggtcacgatggcctggacgaagaagccgaacatgga 643 Query: 364 gaaca 368 ||||| Sbjct: 642 gaaca 638
>emb|X61287.1|LECAB9 L.esculentum Cab9 gene for type I (26 kD) CP29 polypeptide Length = 2327 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Minus Query: 256 gatgacggtgagcaggttgttgccgaaggggtc 288 |||||||||||||| ||||||||| |||||||| Sbjct: 1939 gatgacggtgagcaagttgttgccaaaggggtc 1907
>gb|AF104630.1|AF104630 Chlamydomonas reinhardtii light harvesting complex II protein precursor (Lhcb2) mRNA, complete cds Length = 1200 Score = 50.1 bits (25), Expect = 0.005 Identities = 55/65 (84%) Strand = Plus / Minus Query: 304 caggttctcgaagggcccctcgccggtgacgtaggcctggatgaagaagcccagcatgga 363 |||||||| || ||| |||| |||||| ||| |||||||| ||||||||| | |||||| Sbjct: 726 caggttctggacggggcccttgccggtcacgatggcctggacgaagaagccgaacatgga 667 Query: 364 gaaca 368 ||||| Sbjct: 666 gaaca 662
>dbj|AB051209.1| Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b binding protein LhcII-3, complete cds Length = 1256 Score = 50.1 bits (25), Expect = 0.005 Identities = 55/65 (84%) Strand = Plus / Minus Query: 304 caggttctcgaagggcccctcgccggtgacgtaggcctggatgaagaagcccagcatgga 363 |||||||| || ||| |||| |||||| ||| |||||||| ||||||||| | |||||| Sbjct: 718 caggttctggatggggcccttgccggtcacgatggcctggacgaagaagccgaacatgga 659 Query: 364 gaaca 368 ||||| Sbjct: 658 gaaca 654
>dbj|AB051208.1| Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b binding protein LhcII-1.3, complete cds Length = 1107 Score = 50.1 bits (25), Expect = 0.005 Identities = 55/65 (84%) Strand = Plus / Minus Query: 304 caggttctcgaagggcccctcgccggtgacgtaggcctggatgaagaagcccagcatgga 363 |||||||| || ||| |||| |||||| ||| |||||||| ||||||||| | |||||| Sbjct: 748 caggttctggatggggcccttgccggtcacgatggcctggacgaagaagccgaacatgga 689 Query: 364 gaaca 368 ||||| Sbjct: 688 gaaca 684
>dbj|AB051205.1| Chlamydomonas reinhardtii gene for light-harvesting chlorophyll-a/b binding protein LhcII-3, complete cds Length = 1508 Score = 50.1 bits (25), Expect = 0.005 Identities = 55/65 (84%) Strand = Plus / Minus Query: 304 caggttctcgaagggcccctcgccggtgacgtaggcctggatgaagaagcccagcatgga 363 |||||||| || ||| |||| |||||| ||| |||||||| ||||||||| | |||||| Sbjct: 1399 caggttctggatggggcccttgccggtcacgatggcctggacgaagaagccgaacatgga 1340 Query: 364 gaaca 368 ||||| Sbjct: 1339 gaaca 1335
>dbj|AB051204.1| Chlamydomonas reinhardtii gene for light-harvesting chlorophyll-a/b binding protein LhcII-1.3, complete cds Length = 1835 Score = 50.1 bits (25), Expect = 0.005 Identities = 55/65 (84%) Strand = Plus / Minus Query: 304 caggttctcgaagggcccctcgccggtgacgtaggcctggatgaagaagcccagcatgga 363 |||||||| || ||| |||| |||||| ||| |||||||| ||||||||| | |||||| Sbjct: 1590 caggttctggatggggcccttgccggtcacgatggcctggacgaagaagccgaacatgga 1531 Query: 364 gaaca 368 ||||| Sbjct: 1530 gaaca 1526
>emb|X55892.1|ZMLHCABB Zea mays L. mRNA for light-harvesting chlorophyll a/b binding protein Length = 869 Score = 48.1 bits (24), Expect = 0.020 Identities = 54/64 (84%) Strand = Plus / Minus Query: 305 aggttctcgaagggcccctcgccggtgacgtaggcctggatgaagaagcccagcatggag 364 |||||||||| || |||| |||||||||| |||||||| |||||| || | ||||||| Sbjct: 737 aggttctcgagcgggcccttgccggtgacgatggcctggacgaagaacccgaacatggag 678 Query: 365 aaca 368 |||| Sbjct: 677 aaca 674
>gb|L23107.1|GBICABBP Ginkgo biloba nuclear-encoded chloroplast chlorophyll a/b binding protein mRNA, complete cds Length = 997 Score = 48.1 bits (24), Expect = 0.020 Identities = 54/64 (84%) Strand = Plus / Minus Query: 305 aggttctcgaagggcccctcgccggtgacgtaggcctggatgaagaagcccagcatggag 364 |||||||||| ||| || | |||||||||| |||||||| |||||| || | ||||||| Sbjct: 798 aggttctcgatggggcctttgccggtgacgatggcctggacgaagaaaccgaacatggag 739 Query: 365 aaca 368 |||| Sbjct: 738 aaca 735
>dbj|AB050007.2| Chlamydomonas reinhardtii lhcb5 mRNA for CP26, complete cds Length = 952 Score = 46.1 bits (23), Expect = 0.079 Identities = 29/31 (93%) Strand = Plus / Minus Query: 259 gacggtgagcaggttgttgccgaaggggtcg 289 |||||| |||||||||| ||||||||||||| Sbjct: 883 gacggtcagcaggttgtagccgaaggggtcg 853 Score = 46.1 bits (23), Expect = 0.079 Identities = 44/51 (86%) Strand = Plus / Minus Query: 315 agggcccctcgccggtgacgtaggcctggatgaagaagcccagcatggaga 365 |||| ||||||||||| ||||||| ||||| | ||||||||||| ||||| Sbjct: 827 aggggccctcgccggtcacgtaggactggacggcgaagcccagcacggaga 777
>dbj|AB211497.1| Lemna paucicostata LpCAB1 mRNA for CAB homologue1, partial cds Length = 695 Score = 44.1 bits (22), Expect = 0.31 Identities = 52/62 (83%) Strand = Plus / Minus Query: 307 gttctcgaagggcccctcgccggtgacgtaggcctggatgaagaagcccagcatggagaa 366 |||||||| ||| |||| |||||| ||| |||||||| |||||| || | ||||||||| Sbjct: 634 gttctcgaggggtcccttgccggtcacgatggcctggacgaagaatccgaacatggagaa 575 Query: 367 ca 368 || Sbjct: 574 ca 573
>emb|X12735.1|HVCAB2 Barley Cab-2 gene for major light-harvesting chlorophyll a/b- binding protein ( LHCP ) Length = 1030 Score = 44.1 bits (22), Expect = 0.31 Identities = 52/62 (83%) Strand = Plus / Minus Query: 307 gttctcgaagggcccctcgccggtgacgtaggcctggatgaagaagcccagcatggagaa 366 |||||||| |||||||| ||||||||| |||||| | |||||| || | ||||||||| Sbjct: 900 gttctcgaggggccccttcccggtgacgatggcctgcacgaagaatccgaacatggagaa 841 Query: 367 ca 368 || Sbjct: 840 ca 839
>dbj|AP005228.3| Homo sapiens genomic DNA, chromosome 18 clone:RP11-119P12, complete sequence Length = 186978 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Minus Query: 338 gcctggatgaagaagcccagcatgga 363 |||||| ||||||||||||||||||| Sbjct: 160178 gcctgggtgaagaagcccagcatgga 160153
>dbj|AP000874.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-760N9, complete sequences Length = 150638 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Minus Query: 338 gcctggatgaagaagcccagcatgga 363 |||||| ||||||||||||||||||| Sbjct: 33339 gcctgggtgaagaagcccagcatgga 33314
>gb|AF104631.3| Chlamydomonas reinhardtii light harvesting complex II protein precursor (Lhcb3) mRNA, complete cds Length = 1314 Score = 42.1 bits (21), Expect = 1.2 Identities = 42/49 (85%) Strand = Plus / Minus Query: 320 ccctcgccggtgacgtaggcctggatgaagaagcccagcatggagaaca 368 |||| |||||| ||| |||||||| ||||||||| | ||||||||||| Sbjct: 758 cccttgccggtcacgatggcctggacgaagaagccgaacatggagaaca 710
>gb|AC145591.5| Mus musculus BAC clone RP24-176N2 from chromosome 18, complete sequence Length = 167532 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 aaattcacacagcacatcatg 152 ||||||||||||||||||||| Sbjct: 74556 aaattcacacagcacatcatg 74536
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 243 cggcggcgccggagatgacgg 263 ||||||||||||||||||||| Sbjct: 23574580 cggcggcgccggagatgacgg 23574600
>dbj|AP003629.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0481H08 Length = 146841 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 243 cggcggcgccggagatgacgg 263 ||||||||||||||||||||| Sbjct: 55544 cggcggcgccggagatgacgg 55564
>gb|AF165529.1|AF165529 Rumex palustris chlorophyll a/b binding protein (CAB1) mRNA, complete cds Length = 986 Score = 42.1 bits (21), Expect = 1.2 Identities = 42/49 (85%) Strand = Plus / Minus Query: 320 ccctcgccggtgacgtaggcctggatgaagaagcccagcatggagaaca 368 |||| |||||||||| |||||||| |||||| || | ||||||||||| Sbjct: 761 cccttgccggtgacgatggcctggacgaagaatccgaacatggagaaca 713
>gb|U25812.1|PSU25812 Pseudomonas syringae pv. syringae hrp gene cluster, hrpU, hrpW, hrpO, hrpX, and hrpY genes, complete cds, and hrpU2, partial cds Length = 3672 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 260 acggtgagcaggttgttgccgaagg 284 ||||||||||||| ||||||||||| Sbjct: 488 acggtgagcaggtggttgccgaagg 512
>gb|AC139637.17| Mus musculus chromosome 15, clone RP24-253M12, complete sequence Length = 136076 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 caggctgggcaccctctcgg 245 |||||||||||||||||||| Sbjct: 97871 caggctgggcaccctctcgg 97852
>ref|NM_001039970.1| Homo sapiens protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched) (PTPN5), transcript variant 3, mRNA Length = 3105 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 ctcacaggctgggcaccctc 241 |||||||||||||||||||| Sbjct: 2657 ctcacaggctgggcaccctc 2638
>ref|NM_032781.3| Homo sapiens protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched) (PTPN5), transcript variant 2, mRNA Length = 3156 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 ctcacaggctgggcaccctc 241 |||||||||||||||||||| Sbjct: 2708 ctcacaggctgggcaccctc 2689
>ref|NM_006906.1| Homo sapiens protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched) (PTPN5), transcript variant 1, mRNA Length = 3201 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 ctcacaggctgggcaccctc 241 |||||||||||||||||||| Sbjct: 2753 ctcacaggctgggcaccctc 2734
>gb|AY171229.1| Chlamydomonas reinhardtii light-harvesting complex II protein (Lhcb) mRNA, complete cds; nuclear gene for chloroplast product Length = 1024 Score = 40.1 bits (20), Expect = 4.9 Identities = 62/76 (81%) Strand = Plus / Minus Query: 293 aggtgggcgcacaggttctcgaagggcccctcgccggtgacgtaggcctggatgaagaag 352 |||||| || ||||||||| | ||| |||| |||||| ||| |||||| | ||||||| Sbjct: 733 aggtggtcggacaggttctgcagggggcccttgccggtcacgatggcctgaacgaagaag 674 Query: 353 cccagcatggagaaca 368 || | ||||||||||| Sbjct: 673 ccgaacatggagaaca 658
>gb|AC142474.4| Mus musculus BAC clone RP24-362N7 from chromosome 15, complete sequence Length = 172879 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 caggctgggcaccctctcgg 245 |||||||||||||||||||| Sbjct: 152256 caggctgggcaccctctcgg 152275
>emb|X53398.1|ZMCABM7 Z.mays cab-m7 gene for light harvesting chlorophyll a/b binding protein Length = 2261 Score = 40.1 bits (20), Expect = 4.9 Identities = 53/64 (82%) Strand = Plus / Minus Query: 305 aggttctcgaagggcccctcgccggtgacgtaggcctggatgaagaagcccagcatggag 364 |||||||||| || |||| ||||||||| |||||||| |||||| || | ||||||| Sbjct: 1737 aggttctcgagcgggcccttcccggtgacgatggcctggacgaagaatccgaacatggag 1678 Query: 365 aaca 368 |||| Sbjct: 1677 aaca 1674
>emb|AL158155.24| Human DNA sequence from clone RP11-397D12 on chromosome 9p12-13.3 Contains the 3' end of a novel gene (FLJ22611), a novel gene, the GRHPR gene for glyoxylate reductase/hydroxypyruvate reductase, a novel gene (KIAA0354), a novel pseuodgene and a CpG island, complete sequence Length = 192336 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 7 atttgagaaattactcaagtagcagtgg 34 |||| |||||||||| |||||||||||| Sbjct: 21805 attttagaaattacttaagtagcagtgg 21832
>ref|XM_883654.1| Candida albicans SC5314 hypothetical protein (CaJ7.0138) partial mRNA Length = 936 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 270 ggttgttgccgaaggggtcgctga 293 ||||| |||||||||||||||||| Sbjct: 588 ggttggtgccgaaggggtcgctga 611
>ref|XM_707383.1| Candida albicans SC5314 potential guanine nucleotide exchange factor eIF-2B alpha subunit (GCN3) partial mRNA Length = 936 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 270 ggttgttgccgaaggggtcgctga 293 ||||| |||||||||||||||||| Sbjct: 588 ggttggtgccgaaggggtcgctga 611
>gb|BC046435.1| Homo sapiens protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched), mRNA (cDNA clone IMAGE:5198635), partial cds Length = 1680 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 ctcacaggctgggcaccctc 241 |||||||||||||||||||| Sbjct: 1232 ctcacaggctgggcaccctc 1213
>gb|BC064807.1| Homo sapiens protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched), transcript variant 1, mRNA (cDNA clone MGC:65158 IMAGE:5726473), complete cds Length = 2947 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 ctcacaggctgggcaccctc 241 |||||||||||||||||||| Sbjct: 2517 ctcacaggctgggcaccctc 2498
>gb|BC039897.1| Homo sapiens protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched), mRNA (cDNA clone IMAGE:5196107), partial cds Length = 2860 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 ctcacaggctgggcaccctc 241 |||||||||||||||||||| Sbjct: 2416 ctcacaggctgggcaccctc 2397
>emb|AL832541.1|HSM803850 Homo sapiens mRNA; cDNA DKFZp547A0817 (from clone DKFZp547A0817) Length = 3149 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 ctcacaggctgggcaccctc 241 |||||||||||||||||||| Sbjct: 2751 ctcacaggctgggcaccctc 2732
>emb|AL806524.10| Mouse DNA sequence from clone RP23-158E10 on chromosome 4, complete sequence Length = 211513 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 tcacacagcacatcatgctg 155 |||||||||||||||||||| Sbjct: 62126 tcacacagcacatcatgctg 62107
>gb|AC123776.5| Homo sapiens chromosome 8, clone RP11-213I2, complete sequence Length = 157633 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 tgaagaagcccagcatggag 364 |||||||||||||||||||| Sbjct: 3547 tgaagaagcccagcatggag 3528
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 250 gccggagatgacggtgagcaggttgttg 277 |||||||||||||||||| | ||||||| Sbjct: 391992 gccggagatgacggtgaggatgttgttg 391965
>dbj|AK127312.1| Homo sapiens cDNA FLJ45381 fis, clone BRHIP3021019, highly similar to Protein-tyrosine phosphatase, non-receptor type 5 (EC 3.1.3.48) Length = 3871 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 ctcacaggctgggcaccctc 241 |||||||||||||||||||| Sbjct: 3491 ctcacaggctgggcaccctc 3472
>dbj|AK090923.1| Homo sapiens cDNA FLJ33604 fis, clone BRAMY2015251, highly similar to PROTEIN-TYROSINE PHOSPHATASE STRIATUM-ENRICHED (EC 3.1.3.48) Length = 2965 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 ctcacaggctgggcaccctc 241 |||||||||||||||||||| Sbjct: 2617 ctcacaggctgggcaccctc 2598
>dbj|AK027333.1| Homo sapiens cDNA FLJ14427 fis, clone HEMBA1006173 Length = 1074 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 ctcacaggctgggcaccctc 241 |||||||||||||||||||| Sbjct: 694 ctcacaggctgggcaccctc 675
>dbj|AK055450.1| Homo sapiens cDNA FLJ30888 fis, clone FEBRA2005079, highly similar to PROTEIN-TYROSINE PHOSPHATASE STRIATUM-ENRICHED (EC 3.1.3.48) Length = 2299 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 ctcacaggctgggcaccctc 241 |||||||||||||||||||| Sbjct: 1919 ctcacaggctgggcaccctc 1900
>gb|AC103974.6| Homo sapiens chromosome 11, clone RP11-1081L13, complete sequence Length = 189230 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 ctcacaggctgggcaccctc 241 |||||||||||||||||||| Sbjct: 153760 ctcacaggctgggcaccctc 153741
>emb|BX530075.7| Zebrafish DNA sequence from clone CH211-1O14 in linkage group 5, complete sequence Length = 176078 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 cgcacgcacgcatgcagctg 178 |||||||||||||||||||| Sbjct: 134568 cgcacgcacgcatgcagctg 134587
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 239 ctctcggcggcgccggagatgacg 262 |||||| ||||||||||||||||| Sbjct: 10937451 ctctcgccggcgccggagatgacg 10937428
>emb|AL731618.3|OSJN00269 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012A12, complete sequence Length = 122766 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 239 ctctcggcggcgccggagatgacg 262 |||||| ||||||||||||||||| Sbjct: 40516 ctctcgccggcgccggagatgacg 40493
>gb|AC021093.16|AC021093 Homo sapiens chromosome 8 clone RP11-213I2, complete sequence Length = 157604 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 tgaagaagcccagcatggag 364 |||||||||||||||||||| Sbjct: 3547 tgaagaagcccagcatggag 3528
>gb|BC047349.1| Mus musculus, clone IMAGE:3595895, mRNA Length = 1680 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 ctcacaggctgggcaccctc 241 |||||||||||||||||||| Sbjct: 1232 ctcacaggctgggcaccctc 1213
>gb|AC011200.9|AC011200 Homo sapiens chromosome 8 clone RP11-71N3, complete sequence Length = 161271 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 tgaagaagcccagcatggag 364 |||||||||||||||||||| Sbjct: 160643 tgaagaagcccagcatggag 160624
>gb|AC131042.6| Homo sapiens chromosome 8, clone CTD-2607C6, complete sequence Length = 152632 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 tgaagaagcccagcatggag 364 |||||||||||||||||||| Sbjct: 1283 tgaagaagcccagcatggag 1302
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gccggagatgacggtgagcaggttgttg 277 ||||| |||||||||||||| ||||||| Sbjct: 6048197 gccggtgatgacggtgagcacgttgttg 6048224
>dbj|AB060245.1| Macaca fascicularis brain cDNA clone:QflA-15249, full insert sequence Length = 2837 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 ctcacaggctgggcaccctc 241 |||||||||||||||||||| Sbjct: 2441 ctcacaggctgggcaccctc 2422
>gb|AY109324.1| Zea mays CL187_1 mRNA sequence Length = 2262 Score = 40.1 bits (20), Expect = 4.9 Identities = 53/64 (82%) Strand = Plus / Minus Query: 305 aggttctcgaagggcccctcgccggtgacgtaggcctggatgaagaagcccagcatggag 364 |||||||||| || |||| ||||||||| |||||||| |||||| || | ||||||| Sbjct: 1737 aggttctcgagcgggcccttcccggtgacgatggcctggacgaagaatccgaacatggag 1678 Query: 365 aaca 368 |||| Sbjct: 1677 aaca 1674
>gb|U68715.1|BFU68715 Botryotinia fuckeliana endopolygalacturonase 1 (BcPGA1) gene, complete cds Length = 2291 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 gcatcaacagccgacggcgg 199 |||||||||||||||||||| Sbjct: 669 gcatcaacagccgacggcgg 688
>dbj|AP006852.1| Candida albicans genomic DNA, chromosome 7, complete sequence Length = 949626 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 270 ggttgttgccgaaggggtcgctga 293 ||||| |||||||||||||||||| Sbjct: 254994 ggttggtgccgaaggggtcgctga 255017
>emb|AL390254.6|CNS06C7M Human chromosome 14 DNA sequence BAC R-991C1 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 177792 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 gcacgcatgcagctgagcat 183 |||||||||||||||||||| Sbjct: 109052 gcacgcatgcagctgagcat 109033
>dbj|AB051210.1| Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b binding protein LhcII-4, complete cds Length = 988 Score = 40.1 bits (20), Expect = 4.9 Identities = 62/76 (81%) Strand = Plus / Minus Query: 293 aggtgggcgcacaggttctcgaagggcccctcgccggtgacgtaggcctggatgaagaag 352 |||||| || ||||||||| | ||| |||| |||||| ||| |||||| | ||||||| Sbjct: 717 aggtggtcggacaggttctgcagggggcccttgccggtcacgatggcctgaacgaagaag 658 Query: 353 cccagcatggagaaca 368 || | ||||||||||| Sbjct: 657 ccgaacatggagaaca 642 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,205,976 Number of Sequences: 3902068 Number of extensions: 3205976 Number of successful extensions: 60097 Number of sequences better than 10.0: 130 Number of HSP's better than 10.0 without gapping: 131 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 59435 Number of HSP's gapped (non-prelim): 655 length of query: 368 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 346 effective length of database: 17,147,199,772 effective search space: 5932931121112 effective search space used: 5932931121112 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
