ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet91b09 |
|---|---|
| Clone Library Name | barley_pub |
>OPRD_RAT (P33533) Delta-type opioid receptor (DOR-1) (Opioid receptor A)| Length = 372 Score = 30.4 bits (67), Expect = 1.1 Identities = 12/16 (75%), Positives = 12/16 (75%) Frame = -3 Query: 343 TRRERVAACRPGDGPG 296 T RERV AC P DGPG Sbjct: 352 TARERVTACTPSDGPG 367
>OPRD_MOUSE (P32300) Delta-type opioid receptor (DOR-1) (K56) (MSL-2)| Length = 372 Score = 30.4 bits (67), Expect = 1.1 Identities = 12/16 (75%), Positives = 12/16 (75%) Frame = -3 Query: 343 TRRERVAACRPGDGPG 296 T RERV AC P DGPG Sbjct: 352 TTRERVTACTPSDGPG 367
>OPRD_HUMAN (P41143) Delta-type opioid receptor (DOR-1)| Length = 372 Score = 30.4 bits (67), Expect = 1.1 Identities = 12/16 (75%), Positives = 12/16 (75%) Frame = -3 Query: 343 TRRERVAACRPGDGPG 296 T RERV AC P DGPG Sbjct: 352 TARERVTACTPSDGPG 367
>ADCY9_XENLA (P98999) Adenylate cyclase type 9 (EC 4.6.1.1) (Adenylate cyclase| type IX) (ATP pyrophosphate-lyase 9) (Adenylyl cyclase 9) (xlAC) Length = 1305 Score = 29.6 bits (65), Expect = 1.9 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = -1 Query: 354 SSCSRGESGSPRAGRGTDRESPLRELSPSMKQSTQNWY 241 SSCS GESG + G G+ ++L ++ST NW+ Sbjct: 48 SSCSSGESGVKKTG-GSGGARRQKKLPQLFERSTSNWW 84
>TESK1_HUMAN (Q15569) Dual specificity testis-specific protein kinase 1 (EC| 2.7.12.1) (Testicular protein kinase 1) Length = 626 Score = 28.9 bits (63), Expect = 3.2 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = +3 Query: 231 PLARTSSESTVSCSGKAPEGAIPGPSP 311 P S+E + C G +PE PGP+P Sbjct: 458 PAVGPSAEEKMECEGSSPEPEPPGPAP 484
>EXOC4_MOUSE (O35382) Exocyst complex component 4 (Exocyst complex component| Sec8) Length = 975 Score = 28.5 bits (62), Expect = 4.2 Identities = 19/57 (33%), Positives = 26/57 (45%) Frame = +3 Query: 135 LRFDIQSTGQKSHCVSIREDHRNALF*LNSRIPLARTSSESTVSCSGKAPEGAIPGP 305 LR ++ S H V I E HR+ SR+ + R + +S GK P PGP Sbjct: 177 LRLELHSKKMNLHLVLIEELHRHLYIKSTSRV-VQRNKEKGKMSSHGKDPS---PGP 229
>FOXQ1_MOUSE (O70220) Forkhead box protein Q1 (Hepatocyte nuclear factor 3| forkhead homolog 1) (HNF-3/forkhead-like protein 1) (HFH-1) (HFH-1l) Length = 400 Score = 28.5 bits (62), Expect = 4.2 Identities = 15/29 (51%), Positives = 17/29 (58%) Frame = +3 Query: 240 RTSSESTVSCSGKAPEGAIPGPSPGRHAA 326 R S +TVS SG PE A PGP+ AA Sbjct: 211 RLSHRTTVSASGLRPEEAPPGPAGTPQAA 239
>ATT_APLFA (Q7M459) Attractin| Length = 58 Score = 28.1 bits (61), Expect = 5.5 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 5/47 (10%) Frame = -1 Query: 240 GQGESDCLIKTKHCDGPRGC*RNVISAQC-----SECQSEEIQPSAG 115 G S C ++ ++CD GC N I +C CQ++E + ++G Sbjct: 7 GNITSQCEMQHQNCDDANGC--NTIIEECKTSMVERCQNQEFESASG 51
>CORIN_HUMAN (Q9Y5Q5) Atrial natriuteric peptide-converting enzyme (EC 3.4.21.-)| (pro-ANP-converting enzyme) (Corin) (Heart-specific serine proteinase ATC2) (Transmembrane protease, serine 10) Length = 1042 Score = 28.1 bits (61), Expect = 5.5 Identities = 13/40 (32%), Positives = 17/40 (42%) Frame = -1 Query: 246 WYGQGESDCLIKTKHCDGPRGC*RNVISAQCSECQSEEIQ 127 W CL T CDG C + CS CQ +E++ Sbjct: 622 WECPSNKQCLKHTVICDGFPDCPDYMDEKNCSFCQDDELE 661
>ATT_APLCA (O96910) Attractin precursor| Length = 76 Score = 27.7 bits (60), Expect = 7.2 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 5/47 (10%) Frame = -1 Query: 240 GQGESDCLIKTKHCDGPRGC*RNVISAQC-----SECQSEEIQPSAG 115 G S C ++ K+C+ GC + I +C CQ++E + +AG Sbjct: 25 GNITSQCQMQHKNCEDANGC--DTIIEECKTSMVERCQNQEFESAAG 69
>GAP_CAEEL (P34288) GTPase-activating protein GAP (CeGAP)| Length = 1317 Score = 27.7 bits (60), Expect = 7.2 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = +3 Query: 231 PLARTSSESTVSCSGKAPEGAIPGPSPGRHAAT 329 P+ TSS S++S SG+A A+ + G AAT Sbjct: 129 PVFTTSSTSSISTSGEASSTAVAAAAAGSVAAT 161
>IBP_CARCR (P00993) Chelonianin (Basic protease inhibitor) (RTPI)| Length = 110 Score = 27.7 bits (60), Expect = 7.2 Identities = 11/24 (45%), Positives = 15/24 (62%) Frame = -3 Query: 343 TRRERVAACRPGDGPGIAPSGAFP 272 T+ E V ACRP + PG+ P + P Sbjct: 50 TKAECVRACRPPERPGVCPKTSGP 73
>TESK1_RAT (Q63572) Dual specificity testis-specific protein kinase 1 (EC| 2.7.12.1) (Testicular protein kinase 1) Length = 628 Score = 27.7 bits (60), Expect = 7.2 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = +3 Query: 246 SSESTVSCSGKAPEGAIPGPSP 311 S+E + C G +PE PGP+P Sbjct: 465 STEERMDCEGSSPEPEPPGPAP 486
>CORIN_MOUSE (Q9Z319) Atrial natriuteric peptide-converting enzyme (EC 3.4.21.-)| (pro-ANP-converting enzyme) (Corin) (Low density lipoprotein receptor-related protein 4) Length = 1113 Score = 27.3 bits (59), Expect = 9.4 Identities = 13/40 (32%), Positives = 17/40 (42%) Frame = -1 Query: 246 WYGQGESDCLIKTKHCDGPRGC*RNVISAQCSECQSEEIQ 127 W CL T CDG C ++ CS CQ E++ Sbjct: 690 WECPFNKQCLKHTLICDGFPDCPDSMDEKNCSFCQDNELE 729
>LRP_CAEEL (Q04833) Low-density lipoprotein receptor-related protein precursor| (LRP) Length = 4753 Score = 27.3 bits (59), Expect = 9.4 Identities = 11/33 (33%), Positives = 15/33 (45%) Frame = -1 Query: 246 WYGQGESDCLIKTKHCDGPRGC*RNVISAQCSE 148 W G C+ + K CDG + C QCS+ Sbjct: 267 WNCPGTGHCIDQLKLCDGSKDCADGADEQQCSQ 299
>TTC16_MACFA (Q95LZ5) Tetratricopeptide repeat protein 16 (TPR repeat protein| 16) Length = 872 Score = 27.3 bits (59), Expect = 9.4 Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 1/84 (1%) Frame = -1 Query: 354 SSCSRGESGSPRAGRGTDRESPLRELSPSMKQSTQNWY-GQGESDCLIKTKHCDGPRGC* 178 ++ R S +A +G R S E + +QS+ QG KTK PR Sbjct: 712 AAAHRRNSSKTKATQGQGRRSSKTEATQGQRQSSSEIETSQGPRQEPSKTKTTRSPRQRP 771 Query: 177 RNVISAQCSECQSEEIQPSAGKRR 106 R V +A+ + ++ + G+RR Sbjct: 772 RKVKAARGRSWRPSKLDATQGRRR 795
>SORL_RABIT (Q95209) Sortilin-related receptor precursor (Sorting protein-related| receptor containing LDLR class A repeats) (SorLA) (SorLA-1) (Low-density lipoprotein receptor relative with 11 ligand-binding repeats) (LDLR relative with 11 ligand-binding Length = 2213 Score = 27.3 bits (59), Expect = 9.4 Identities = 13/36 (36%), Positives = 17/36 (47%) Frame = -1 Query: 288 LRELSPSMKQSTQNWYGQGESDCLIKTKHCDGPRGC 181 L +P+ N+Y G C+I T CDG R C Sbjct: 1408 LPSTTPAPSTCLPNYYRCGGGACVIDTWVCDGYRDC 1443
>KCNE3_RAT (Q9JJV7) Potassium voltage-gated channel subfamily E member 3| (Minimum potassium ion channel-related peptide 2) (Potassium channel beta subunit MiRP2) (MinK-related peptide 2) Length = 107 Score = 27.3 bits (59), Expect = 9.4 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = -3 Query: 319 CRPGDGPGIAPSGAFPEHETVD 254 CRPG GPG SG P+++T D Sbjct: 31 CRPGPGPG---SGTGPDNQTED 49 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,203,616 Number of Sequences: 219361 Number of extensions: 982472 Number of successful extensions: 3103 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 2935 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3102 length of database: 80,573,946 effective HSP length: 95 effective length of database: 59,734,651 effective search space used: 1433631624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
