| Clone Name | rbaet91a10 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.009 Identities = 24/24 (100%) Strand = Plus / Plus Query: 84 aatccccaaattgtacttgcacta 107 |||||||||||||||||||||||| Sbjct: 5130701 aatccccaaattgtacttgcacta 5130724
>dbj|AP002537.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0001B06 Length = 140304 Score = 48.1 bits (24), Expect = 0.009 Identities = 24/24 (100%) Strand = Plus / Plus Query: 84 aatccccaaattgtacttgcacta 107 |||||||||||||||||||||||| Sbjct: 124139 aatccccaaattgtacttgcacta 124162
>dbj|AP003417.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0498B01 Length = 146812 Score = 48.1 bits (24), Expect = 0.009 Identities = 24/24 (100%) Strand = Plus / Plus Query: 84 aatccccaaattgtacttgcacta 107 |||||||||||||||||||||||| Sbjct: 62732 aatccccaaattgtacttgcacta 62755
>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete genome Length = 3397754 Score = 44.1 bits (22), Expect = 0.14 Identities = 22/22 (100%) Strand = Plus / Plus Query: 74 taagcaaaacaatccccaaatt 95 |||||||||||||||||||||| Sbjct: 1194103 taagcaaaacaatccccaaatt 1194124
>gb|AC140949.1| Pan troglodytes BAC clone RP43-168N2 from 7, complete sequence Length = 193777 Score = 42.1 bits (21), Expect = 0.56 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 tacaaagttaagcaaaacaat 86 ||||||||||||||||||||| Sbjct: 117996 tacaaagttaagcaaaacaat 117976
>gb|AF373870.1| Wolbachia endosymbiont of Brugia malayi clone 03K15 sequence Length = 63116 Score = 42.1 bits (21), Expect = 0.56 Identities = 21/21 (100%) Strand = Plus / Plus Query: 152 ggaaaaaatattaaccaaata 172 ||||||||||||||||||||| Sbjct: 22826 ggaaaaaatattaaccaaata 22846
>emb|AL935049.19| Zebrafish DNA sequence from clone CH211-185K2 in linkage group 20, complete sequence Length = 148715 Score = 42.1 bits (21), Expect = 0.56 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 ttaagcaaaacaatccccaaa 93 ||||||||||||||||||||| Sbjct: 102695 ttaagcaaaacaatccccaaa 102675
>emb|AL928716.15| Zebrafish DNA sequence from clone DKEY-23K6 in linkage group 20, complete sequence Length = 246647 Score = 42.1 bits (21), Expect = 0.56 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 ttaagcaaaacaatccccaaa 93 ||||||||||||||||||||| Sbjct: 110432 ttaagcaaaacaatccccaaa 110452
>gb|AE017321.1| Wolbachia endosymbiont strain TRS of Brugia malayi, complete genome Length = 1080084 Score = 42.1 bits (21), Expect = 0.56 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 ggaaaaaatattaaccaaata 172 ||||||||||||||||||||| Sbjct: 479754 ggaaaaaatattaaccaaata 479734
>emb|BX571866.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment 8/17 Length = 349652 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 agaaaatagggaaaaaatat 162 |||||||||||||||||||| Sbjct: 239591 agaaaatagggaaaaaatat 239610
>emb|BX649484.12| Zebrafish DNA sequence from clone CH211-197H24 in linkage group 16, complete sequence Length = 196058 Score = 40.1 bits (20), Expect = 2.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 141 gtagaaaatagggaaaaaatatta 164 |||||| ||||||||||||||||| Sbjct: 169607 gtagaatatagggaaaaaatatta 169584
>gb|AC023263.4|AC023263 Homo sapiens, clone RP11-590E14, complete sequence Length = 174176 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 aaaatattaaccaaatagta 175 |||||||||||||||||||| Sbjct: 120075 aaaatattaaccaaatagta 120094
>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete sequence Length = 4332241 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 tacaaagttaagcaaaacaa 85 |||||||||||||||||||| Sbjct: 388725 tacaaagttaagcaaaacaa 388706
>emb|BX005158.8| Zebrafish DNA sequence from clone DKEY-222N6 in linkage group 8, complete sequence Length = 74638 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 agaaaatagggaaaaaatat 162 |||||||||||||||||||| Sbjct: 48176 agaaaatagggaaaaaatat 48157
>gb|AE015927.1| Clostridium tetani E88, complete genome Length = 2799251 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 aaaatagggaaaaaatatta 164 |||||||||||||||||||| Sbjct: 156798 aaaatagggaaaaaatatta 156817
>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome I, complete sequence Length = 4277185 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 tacaaagttaagcaaaacaa 85 |||||||||||||||||||| Sbjct: 387644 tacaaagttaagcaaaacaa 387625
>emb|BX323564.11| Zebrafish DNA sequence from clone DKEYP-1A11, complete sequence Length = 160017 Score = 40.1 bits (20), Expect = 2.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 gaaccgtagaaaatagggaaaaaa 159 |||||||| ||||||||||||||| Sbjct: 57197 gaaccgtataaaatagggaaaaaa 57220
>ref|NM_001016277.2| Xenopus tropicalis hypothetical protein LOC549031 (LOC549031), mRNA Length = 1740 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 66 tacaaagttaagcaaaaca 84 ||||||||||||||||||| Sbjct: 1607 tacaaagttaagcaaaaca 1589
>gb|AC157610.2| Mus musculus chromosome 15, clone RP23-77H12, complete sequence Length = 164913 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 154 aaaaaatattaaccaaata 172 ||||||||||||||||||| Sbjct: 112919 aaaaaatattaaccaaata 112937
>ref|NM_001040419.1| Macaca mulatta elongation of very long chain fatty acids-like 4 (ELOVL4), mRNA Length = 2958 Score = 38.2 bits (19), Expect = 8.8 Identities = 25/27 (92%) Strand = Plus / Minus Query: 69 aaagttaagcaaaacaatccccaaatt 95 ||||||||||||||| ||||| ||||| Sbjct: 529 aaagttaagcaaaaccatcccaaaatt 503
>gb|AC132577.3| Mus musculus BAC clone RP24-445H14 from chromosome Y, complete sequence Length = 175639 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 154 aaaaaatattaaccaaata 172 ||||||||||||||||||| Sbjct: 89028 aaaaaatattaaccaaata 89046
>gb|AC145296.3| Mus musculus BAC clone RP24-404G7 from chromosome Y, complete sequence Length = 183159 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 154 aaaaaatattaaccaaata 172 ||||||||||||||||||| Sbjct: 132019 aaaaaatattaaccaaata 132037
>gb|AC122408.4| Mus musculus BAC clone RP24-137E16 from chromosome 10, complete sequence Length = 131580 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 67 acaaagttaagcaaaacaa 85 ||||||||||||||||||| Sbjct: 87622 acaaagttaagcaaaacaa 87604 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 67 acaaagttaagcaaaacaa 85 ||||||||||||||||||| Sbjct: 29004 acaaagttaagcaaaacaa 29022
>gb|AC134552.4| Mus musculus BAC clone RP24-279K10 from chromosome 8, complete sequence Length = 154774 Score = 38.2 bits (19), Expect = 8.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 150 agggaaaaaatattaaccaaata 172 ||||||||||||||||| ||||| Sbjct: 68371 agggaaaaaatattaacaaaata 68349
>gb|AC131781.3| Mus musculus BAC clone RP24-344J9 from chromosome 15, complete sequence Length = 139338 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 154 aaaaaatattaaccaaata 172 ||||||||||||||||||| Sbjct: 128060 aaaaaatattaaccaaata 128078
>gb|AC145577.2| Mus musculus BAC clone RP24-382J15 from chromosome Y, complete sequence Length = 223903 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 154 aaaaaatattaaccaaata 172 ||||||||||||||||||| Sbjct: 59341 aaaaaatattaaccaaata 59359
>gb|AC147549.4| Mus musculus BAC clone RP24-571D15 from chromosome Y, complete sequence Length = 165378 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 154 aaaaaatattaaccaaata 172 ||||||||||||||||||| Sbjct: 51887 aaaaaatattaaccaaata 51869
>gb|DQ147003.1|DQ147002S2 Macaca mulatta elongation of very long chain fatty acids 4 protein (ELOVL4) gene, exon 2 Length = 393 Score = 38.2 bits (19), Expect = 8.8 Identities = 25/27 (92%) Strand = Plus / Minus Query: 69 aaagttaagcaaaacaatccccaaatt 95 ||||||||||||||| ||||| ||||| Sbjct: 325 aaagttaagcaaaaccatcccaaaatt 299
>gb|AC182424.4| Mus musculus BAC clone RP24-364J10 from chromosome y, complete sequence Length = 153116 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 154 aaaaaatattaaccaaata 172 ||||||||||||||||||| Sbjct: 59681 aaaaaatattaaccaaata 59663
>gb|AC185965.1| Mus musculus chromosome Y clone RP24-73D21, complete sequence Length = 188373 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 154 aaaaaatattaaccaaata 172 ||||||||||||||||||| Sbjct: 145080 aaaaaatattaaccaaata 145098
>gb|AC140203.2| Mus musculus BAC clone RP24-334J15 from chromosome Y, complete sequence Length = 159604 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 154 aaaaaatattaaccaaata 172 ||||||||||||||||||| Sbjct: 151834 aaaaaatattaaccaaata 151852
>gb|AC134852.4| Mus musculus BAC clone RP24-248B6 from chromosome Y, complete sequence Length = 186637 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 154 aaaaaatattaaccaaata 172 ||||||||||||||||||| Sbjct: 81277 aaaaaatattaaccaaata 81295
>gb|AC142255.3| Mus musculus BAC clone RP24-511N9 from chromosome Y, complete sequence Length = 149721 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 154 aaaaaatattaaccaaata 172 ||||||||||||||||||| Sbjct: 63472 aaaaaatattaaccaaata 63454
>gb|AC132384.2| Mus musculus BAC clone RP23-438F16 from chromosome 10, complete sequence Length = 182097 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 67 acaaagttaagcaaaacaa 85 ||||||||||||||||||| Sbjct: 138283 acaaagttaagcaaaacaa 138301
>emb|BX890603.17| Zebrafish DNA sequence from clone DKEYP-19G9 in linkage group 23, complete sequence Length = 184711 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 143 agaaaatagggaaaaaata 161 ||||||||||||||||||| Sbjct: 100037 agaaaatagggaaaaaata 100019
>emb|CR376741.14| Zebrafish DNA sequence from clone DKEY-114B16 in linkage group 8, complete sequence Length = 166048 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 143 agaaaatagggaaaaaata 161 ||||||||||||||||||| Sbjct: 46098 agaaaatagggaaaaaata 46116
>gb|AC151904.6| Mus musculus BAC clone RP23-233K6 from chromosome 10, complete sequence Length = 186667 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 67 acaaagttaagcaaaacaa 85 ||||||||||||||||||| Sbjct: 165749 acaaagttaagcaaaacaa 165767
>emb|AL604028.15| Human DNA sequence from clone RP11-767N6 on chromosome 1 Contains the gene for a novel protein (SP192) (DKFZp434H1428, FLJ21319), a ribosomal protein S15a (RPS15A) pseudogene, a ribosomal protein L7a (RPL7A) pseudogene, the gene for a novel protein (FLJ21029) and one CpG island, complete sequence Length = 82964 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 141 gtagaaaatagggaaaaaa 159 ||||||||||||||||||| Sbjct: 55997 gtagaaaatagggaaaaaa 56015
>gb|AE014836.1| Plasmodium falciparum 3D7 chromosome 11 section 1 of 8 of the complete sequence Length = 250743 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 154 aaaaaatattaaccaaata 172 ||||||||||||||||||| Sbjct: 248461 aaaaaatattaaccaaata 248479
>emb|AL356000.13| Human DNA sequence from clone RP11-296P7 on chromosome 9 Contains a proteasome (prosome, macropain) 26S subunit, ATPase, 3 (PSMC3) (TBP1) pseudogene, the 3' end of a novel gene similar to mouse RIKEN cDNA 4930500O09 gene, the gene for Ras-related GTP-binding protein (RAGA) (FIP-1), the 3' end of a novel gene (FLJ20060) (contains FLJ2902, KIAA1574) and a CpG island, complete sequence Length = 89177 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 agcaaaacaatccccaaat 94 ||||||||||||||||||| Sbjct: 39295 agcaaaacaatccccaaat 39313
>gb|AC158495.2| Capitella capitata clone JGIAUTO-1A8, complete sequence Length = 42314 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 83 caatccccaaattgtactt 101 ||||||||||||||||||| Sbjct: 40528 caatccccaaattgtactt 40546
>emb|BX511125.7| Zebrafish DNA sequence from clone DKEY-88H6 in linkage group 7, complete sequence Length = 86562 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 143 agaaaatagggaaaaaata 161 ||||||||||||||||||| Sbjct: 48841 agaaaatagggaaaaaata 48859
>emb|BX571838.9| Zebrafish DNA sequence from clone DKEY-205N7 in linkage group 13, complete sequence Length = 124398 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 143 agaaaatagggaaaaaata 161 ||||||||||||||||||| Sbjct: 114867 agaaaatagggaaaaaata 114885
>emb|AL807378.5| Zebrafish DNA sequence from clone CH211-215A18 in linkage group 7 Contains three CpG islands, complete sequence Length = 198700 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 147 aatagggaaaaaatattaa 165 ||||||||||||||||||| Sbjct: 34846 aatagggaaaaaatattaa 34864
>emb|BX569799.6| Zebrafish DNA sequence from clone DKEY-10C21 in linkage group 24, complete sequence Length = 56631 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 154 aaaaaatattaaccaaata 172 ||||||||||||||||||| Sbjct: 14670 aaaaaatattaaccaaata 14688
>emb|BX294117.17| Zebrafish DNA sequence from clone CH211-270F13 in linkage group 8, complete sequence Length = 114534 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 143 agaaaatagggaaaaaata 161 ||||||||||||||||||| Sbjct: 100341 agaaaatagggaaaaaata 100323
>gb|AC010248.7| Homo sapiens chromosome 5 clone CTC-406D13, complete sequence Length = 29501 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 147 aatagggaaaaaatattaa 165 ||||||||||||||||||| Sbjct: 12355 aatagggaaaaaatattaa 12373
>gb|AC109463.2| Homo sapiens chromosome 5 clone RP11-273E10, complete sequence Length = 23936 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 143 agaaaatagggaaaaaata 161 ||||||||||||||||||| Sbjct: 862 agaaaatagggaaaaaata 880
>gb|AC113418.2| Homo sapiens chromosome 5 clone RP11-574H6, complete sequence Length = 182740 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 143 agaaaatagggaaaaaata 161 ||||||||||||||||||| Sbjct: 170711 agaaaatagggaaaaaata 170729
>gb|AC069302.4| Homo sapiens BAC clone RP11-322J23 from 4, complete sequence Length = 178780 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 aaacaatccccaaattgta 98 ||||||||||||||||||| Sbjct: 148800 aaacaatccccaaattgta 148782
>gb|AC026427.4| Homo sapiens chromosome 5 clone CTD-2193P3, complete sequence Length = 175838 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 147 aatagggaaaaaatattaa 165 ||||||||||||||||||| Sbjct: 69373 aatagggaaaaaatattaa 69391
>emb|BX323854.9| Zebrafish DNA sequence from clone CH211-286C5 in linkage group 24, complete sequence Length = 161864 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 143 agaaaatagggaaaaaata 161 ||||||||||||||||||| Sbjct: 80846 agaaaatagggaaaaaata 80828
>emb|BX649490.11| Zebrafish DNA sequence from clone DKEY-103K4 in linkage group 22, complete sequence Length = 150534 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 143 agaaaatagggaaaaaata 161 ||||||||||||||||||| Sbjct: 35679 agaaaatagggaaaaaata 35661
>emb|BX537342.6| Zebrafish DNA sequence from clone CH211-198P11 in linkage group 3, complete sequence Length = 195436 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 143 agaaaatagggaaaaaata 161 ||||||||||||||||||| Sbjct: 78856 agaaaatagggaaaaaata 78874
>gb|AC140922.3| Mus musculus BAC clone RP24-471B22 from chromosome y, complete sequence Length = 194152 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 154 aaaaaatattaaccaaata 172 ||||||||||||||||||| Sbjct: 7980 aaaaaatattaaccaaata 7962
>gb|AC174234.4| Mus musculus BAC clone RP24-50H9 from chromosome y, complete sequence Length = 200919 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 154 aaaaaatattaaccaaata 172 ||||||||||||||||||| Sbjct: 103055 aaaaaatattaaccaaata 103073
>gb|AC020901.8|AC020901 Homo sapiens chromosome 5 clone CTC-527N11, complete sequence Length = 180636 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 147 aatagggaaaaaatattaa 165 ||||||||||||||||||| Sbjct: 177627 aatagggaaaaaatattaa 177645
>emb|BX120015.12| Zebrafish DNA sequence from clone RP71-3A8 in linkage group 7, complete sequence Length = 156089 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 143 agaaaatagggaaaaaata 161 ||||||||||||||||||| Sbjct: 72862 agaaaatagggaaaaaata 72880
>gb|BC077495.1| Xenopus laevis general transcription factor IIB, mRNA (cDNA clone MGC:82605 IMAGE:5047331), complete cds Length = 1682 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 66 tacaaagttaagcaaaaca 84 ||||||||||||||||||| Sbjct: 1559 tacaaagttaagcaaaaca 1541
>gb|AC016757.10| Homo sapiens BAC clone RP11-526L8 from 2, complete sequence Length = 158170 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 144 gaaaatagggaaaaaatat 162 ||||||||||||||||||| Sbjct: 4318 gaaaatagggaaaaaatat 4336
>dbj|AB063100.1| Macaca fascicularis brain cDNA clone:QtrA-14469, similar to human elongation of very long chain fatty acids (ELOVL4), mRNA, NM_022726.2 Length = 3072 Score = 38.2 bits (19), Expect = 8.8 Identities = 25/27 (92%) Strand = Plus / Minus Query: 69 aaagttaagcaaaacaatccccaaatt 95 ||||||||||||||| ||||| ||||| Sbjct: 539 aaagttaagcaaaaccatcccaaaatt 513
>gb|AC151901.3| Mus musculus BAC clone RP23-271E15 from chromosome 10, complete sequence Length = 182748 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 67 acaaagttaagcaaaacaa 85 ||||||||||||||||||| Sbjct: 175622 acaaagttaagcaaaacaa 175604 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 67 acaaagttaagcaaaacaa 85 ||||||||||||||||||| Sbjct: 117004 acaaagttaagcaaaacaa 117022
>gb|AC152453.4| Mus musculus BAC clone RP24-238B3 from chromosome 10, complete sequence Length = 182371 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 67 acaaagttaagcaaaacaa 85 ||||||||||||||||||| Sbjct: 169111 acaaagttaagcaaaacaa 169093
>gb|AC116100.2| Dictyostelium discoideum chromosome 2 map 6163571-6199719 strain AX4, complete sequence Length = 36148 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 154 aaaaaatattaaccaaata 172 ||||||||||||||||||| Sbjct: 7892 aaaaaatattaaccaaata 7910
>gb|AF077190.1|AF077190 Papilio glaucus rhodopsin (PglRh2) mRNA, complete cds Length = 1747 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 154 aaaaaatattaaccaaata 172 ||||||||||||||||||| Sbjct: 1595 aaaaaatattaaccaaata 1613
>gb|AC011737.10| Homo sapiens BAC clone RP11-33N4 from 2, complete sequence Length = 176709 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 157 aaatattaaccaaatagta 175 ||||||||||||||||||| Sbjct: 98265 aaatattaaccaaatagta 98247
>gb|AF461184.1|AF461183S2 Macaca fascicularis ELOVL4 (ELOVL4) gene, exons 2 and 3 Length = 2018 Score = 38.2 bits (19), Expect = 8.8 Identities = 25/27 (92%) Strand = Plus / Minus Query: 69 aaagttaagcaaaacaatccccaaatt 95 ||||||||||||||| ||||| ||||| Sbjct: 630 aaagttaagcaaaaccatcccaaaatt 604
>gb|AF461182.1| Macaca fascicularis ELOVL4 mRNA, complete cds Length = 2871 Score = 38.2 bits (19), Expect = 8.8 Identities = 25/27 (92%) Strand = Plus / Minus Query: 69 aaagttaagcaaaacaatccccaaatt 95 ||||||||||||||| ||||| ||||| Sbjct: 404 aaagttaagcaaaaccatcccaaaatt 378
>gb|AC141474.4| Mus musculus BAC clone RP24-192L11 from chromosome y, complete sequence Length = 178464 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 154 aaaaaatattaaccaaata 172 ||||||||||||||||||| Sbjct: 158529 aaaaaatattaaccaaata 158511
>dbj|BA000026.2| Mycoplasma penetrans HF-2 DNA, complete genome Length = 1358633 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 155 aaaaatattaaccaaatag 173 ||||||||||||||||||| Sbjct: 1299832 aaaaatattaaccaaatag 1299850 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 155 aaaaatattaaccaaatag 173 ||||||||||||||||||| Sbjct: 720023 aaaaatattaaccaaatag 720041 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 155 aaaaatattaaccaaatag 173 ||||||||||||||||||| Sbjct: 682455 aaaaatattaaccaaatag 682437 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 155 aaaaatattaaccaaatag 173 ||||||||||||||||||| Sbjct: 677334 aaaaatattaaccaaatag 677352 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 155 aaaaatattaaccaaatag 173 ||||||||||||||||||| Sbjct: 625720 aaaaatattaaccaaatag 625702 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 155 aaaaatattaaccaaatag 173 ||||||||||||||||||| Sbjct: 152103 aaaaatattaaccaaatag 152085
>emb|BX323038.3| Zebrafish DNA sequence from clone DKEYP-57D7 in linkage group 1, complete sequence Length = 87548 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 141 gtagaaaatagggaaaaaa 159 ||||||||||||||||||| Sbjct: 5378 gtagaaaatagggaaaaaa 5396
>emb|AL954387.17| Zebrafish DNA sequence from clone CH211-288B20 in linkage group 18, complete sequence Length = 125744 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 143 agaaaatagggaaaaaata 161 ||||||||||||||||||| Sbjct: 61956 agaaaatagggaaaaaata 61938
>emb|AL929434.3| Zebrafish DNA sequence from clone CH211-127L15, complete sequence Length = 178948 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 143 agaaaatagggaaaaaata 161 ||||||||||||||||||| Sbjct: 67216 agaaaatagggaaaaaata 67198
>emb|AL844186.7| Zebrafish DNA sequence from clone DKEY-265G24, complete sequence Length = 221158 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 152 ggaaaaaatattaaccaaa 170 ||||||||||||||||||| Sbjct: 62198 ggaaaaaatattaaccaaa 62216
>emb|BX957275.7| Zebrafish DNA sequence from clone DKEY-220E22 in linkage group 20, complete sequence Length = 57535 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 143 agaaaatagggaaaaaata 161 ||||||||||||||||||| Sbjct: 26566 agaaaatagggaaaaaata 26548
>emb|CR318631.5| Zebrafish DNA sequence from clone DKEY-207D5 in linkage group 18, complete sequence Length = 189711 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 143 agaaaatagggaaaaaata 161 ||||||||||||||||||| Sbjct: 126037 agaaaatagggaaaaaata 126055
>emb|BX649507.3| Zebrafish DNA sequence from clone CH211-154H20 in linkage group 18, complete sequence Length = 166185 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 143 agaaaatagggaaaaaata 161 ||||||||||||||||||| Sbjct: 28915 agaaaatagggaaaaaata 28897
>emb|BX469928.8| Zebrafish DNA sequence from clone DKEYP-47C5 in linkage group 22, complete sequence Length = 141594 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 143 agaaaatagggaaaaaata 161 ||||||||||||||||||| Sbjct: 134305 agaaaatagggaaaaaata 134287
>emb|BX000347.7| Zebrafish DNA sequence from clone DKEY-66C4 in linkage group 18, complete sequence Length = 155713 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 143 agaaaatagggaaaaaata 161 ||||||||||||||||||| Sbjct: 38964 agaaaatagggaaaaaata 38946
>emb|CR931726.9| Zebrafish DNA sequence from clone DKEYP-38E8 in linkage group 11, complete sequence Length = 131097 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 agcaaaacaatccccaaat 94 ||||||||||||||||||| Sbjct: 38193 agcaaaacaatccccaaat 38175
>emb|AL591401.5| Zebrafish DNA sequence from clone BUSM1-175P12 in linkage group 7, complete sequence Length = 84068 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 143 agaaaatagggaaaaaata 161 ||||||||||||||||||| Sbjct: 41933 agaaaatagggaaaaaata 41951
>emb|CT009559.20| Mouse DNA sequence from clone RP23-66A24 on chromosome 14, complete sequence Length = 78271 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 143 agaaaatagggaaaaaata 161 ||||||||||||||||||| Sbjct: 19593 agaaaatagggaaaaaata 19611
>emb|CR761615.2| Xenopus tropicalis finished cDNA, clone TGas068f17 Length = 1740 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 66 tacaaagttaagcaaaaca 84 ||||||||||||||||||| Sbjct: 1607 tacaaagttaagcaaaaca 1589
>emb|BX510915.23| Zebrafish DNA sequence from clone DKEY-24M12 in linkage group 21, complete sequence Length = 253718 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 143 agaaaatagggaaaaaata 161 ||||||||||||||||||| Sbjct: 192141 agaaaatagggaaaaaata 192159
>emb|BX000465.12| Zebrafish DNA sequence from clone DKEY-30A6 in linkage group 22, complete sequence Length = 214999 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 143 agaaaatagggaaaaaata 161 ||||||||||||||||||| Sbjct: 26975 agaaaatagggaaaaaata 26957
>emb|AL929224.16| Zebrafish DNA sequence from clone CH211-232P9 in linkage group 21, complete sequence Length = 176879 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 143 agaaaatagggaaaaaata 161 ||||||||||||||||||| Sbjct: 175180 agaaaatagggaaaaaata 175162
>gb|AC134865.3| Mus musculus BAC clone RP24-158I3 from Y, complete sequence Length = 159846 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 154 aaaaaatattaaccaaata 172 ||||||||||||||||||| Sbjct: 78275 aaaaaatattaaccaaata 78257
>gb|AC144854.3| Mus musculus BAC clone RP24-216J19 from Y, complete sequence Length = 144593 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 154 aaaaaatattaaccaaata 172 ||||||||||||||||||| Sbjct: 80814 aaaaaatattaaccaaata 80832
>emb|AL691469.9| Mouse DNA sequence from clone RP23-248F18 on chromosome 2, complete sequence Length = 191923 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 36 cagttacacattcaaatag 54 ||||||||||||||||||| Sbjct: 137714 cagttacacattcaaatag 137732 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,504,337 Number of Sequences: 3902068 Number of extensions: 1504337 Number of successful extensions: 113079 Number of sequences better than 10.0: 89 Number of HSP's better than 10.0 without gapping: 89 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 112573 Number of HSP's gapped (non-prelim): 506 length of query: 179 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 157 effective length of database: 17,147,199,772 effective search space: 2692110364204 effective search space used: 2692110364204 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)