ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet91a08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X84308.1|HVLHCA2 H.vulgare mRNA for photosysteme I antenna p... 480 e-132
2emb|X79277.1|LTLHAB L.temulentum lhaB mRNA 196 3e-47
3ref|XM_507384.1| PREDICTED Oryza sativa (japonica cultivar-group... 117 2e-23
4ref|XM_507383.1| PREDICTED Oryza sativa (japonica cultivar-group... 117 2e-23
5ref|XM_507382.1| PREDICTED Oryza sativa (japonica cultivar-group... 117 2e-23
6ref|XM_478841.1| Oryza sativa (japonica cultivar-group), mRNA 117 2e-23
7ref|XM_507381.1| PREDICTED Oryza sativa (japonica cultivar-group... 117 2e-23
8ref|XM_507380.1| PREDICTED Oryza sativa (japonica cultivar-group... 117 2e-23
9ref|XM_507379.1| PREDICTED Oryza sativa (japonica cultivar-group... 117 2e-23
10ref|XM_506426.2| PREDICTED Oryza sativa (japonica cultivar-group... 117 2e-23
11dbj|AK119176.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 2e-23
12dbj|AK104651.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 2e-23
13dbj|AK104608.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 2e-23
14dbj|AK104283.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 2e-23
15dbj|AK104177.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 2e-23
16dbj|AK104127.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 2e-23
17dbj|AK104016.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 2e-23
18dbj|AK103966.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 2e-23
19dbj|AK060987.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 2e-23
20gb|AY105356.1| Zea mays PCO075138 mRNA sequence 117 2e-23
21dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 101 1e-18
22dbj|AP003804.3| Oryza sativa (japonica cultivar-group) genomic D... 101 1e-18
23dbj|AK070051.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 1e-18
24gb|AF010321.1|AF010321 Oryza sativa photosystem I antenna protei... 70 4e-09
25gb|AY105333.1| Zea mays PCO095488 mRNA sequence 64 2e-07
26gb|AC135564.4| Oryza sativa chromosome 3 BAC OSJNBb0056O10 genom... 48 0.014
27gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 48 0.014
28dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.014
29emb|X68682.1|ZMLHCB Z.mays mRNA for type II light-harvesting chl... 48 0.014
30dbj|AK066762.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.014
31gb|AY112240.1| Zea mays CL187_6 mRNA sequence 48 0.014
32dbj|AK058315.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.014
33gb|AF061577.1|AF061577 Oryza sativa chlorophyll a/b binding prot... 48 0.014
34dbj|AK105002.2| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.057
35gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 42 0.89
36dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.89
37dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.89
38dbj|AP005424.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.89
39dbj|AK067780.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.89
40gb|AC166075.2| Mus musculus BAC clone RP23-143L15 from chromosom... 40 3.5
41gb|AF441790.2| Synechococcus sp. PCC 7942 plasmid pANL, complete... 40 3.5
42gb|AC129567.8| Mus musculus chromosome 8, clone RP23-50L10, comp... 40 3.5
43emb|AL034374.2|HS483K16 Human DNA sequence from clone RP3-483K16... 40 3.5
44gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 3.5
45gb|AC137555.4| Mus musculus BAC clone RP23-445B17 from 1, comple... 40 3.5
46gb|U70379.1|SSU70379 Synechococcus PCC7942 NarL homolog, histidi... 40 3.5
47gb|L23107.1|GBICABBP Ginkgo biloba nuclear-encoded chloroplast c... 40 3.5
48gb|CP000101.1| Synechococcus elongatus PCC 7942 plasmid 1, compl... 40 3.5
49gb|M95068.1|MZEORFI Zea mays putative light-harvesting chlorophy... 40 3.5
50dbj|D00642.1|RICLHCP2 Oryza sativa (japonica cultivar-group) mRN... 40 3.5 
>emb|X84308.1|HVLHCA2 H.vulgare mRNA for photosysteme I antenna protein
          Length = 1050

 Score =  480 bits (242), Expect = e-132
 Identities = 242/242 (100%)
 Strand = Plus / Minus

                                                                        
Query: 29   acatcggttacaccagagtacaagtacacatccaacaagcatgcattgctccacaattac 88
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1007 acatcggttacaccagagtacaagtacacatccaacaagcatgcattgctccacaattac 948

                                                                        
Query: 89   ataccatcatccacgggaaaaataatctaattccaccagcgatcttcttccccgtggtag 148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 947  ataccatcatccacgggaaaaataatctaattccaccagcgatcttcttccccgtggtag 888

                                                                        
Query: 149  cacactcctcggatttgttgctaactcccaacgtgttccttacttgggggcgaaggcccg 208
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 887  cacactcctcggatttgttgctaactcccaacgtgttccttacttgggggcgaaggcccg 828

                                                                        
Query: 209  gaagatggtggcatggccggggtcggcgaggtgagcgaagaggttgtcgatggggccggt 268
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827  gaagatggtggcatggccggggtcggcgaggtgagcgaagaggttgtcgatggggccggt 768

              
Query: 269  gc 270
            ||
Sbjct: 767  gc 766
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>emb|X79277.1|LTLHAB L.temulentum lhaB mRNA
          Length = 1026

 Score =  196 bits (99), Expect = 3e-47
 Identities = 141/152 (92%), Gaps = 6/152 (3%)
 Strand = Plus / Minus

                                                                       
Query: 124 ccagcgatcttcttccccgtgg----tagcacactcctcggatttgttgct-aactccca 178
           ||||||||||||||||||||||    |||||||||||||||||| |||||  |||||| |
Sbjct: 872 ccagcgatcttcttccccgtggcagctagcacactcctcggattagttgcccaactcc-a 814

                                                                       
Query: 179 acgtgttccttacttgggggcgaaggcccggaagatggtggcatggccggggtcggcgag 238
           ||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 813 acgtgctccttacttgggggcgaaggccctgaagatggtggcgtggccggggtcggcgag 754

                                           
Query: 239 gtgagcgaagaggttgtcgatggggccggtgc 270
           ||||||||||||||||||||||||||||||||
Sbjct: 753 gtgagcgaagaggttgtcgatggggccggtgc 722



 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 55/57 (96%), Gaps = 2/57 (3%)
 Strand = Plus / Minus

                                                                    
Query: 45  agtacaagtacacatccaacaagcat--gcattgctccacaattacataccatcatc 99
           ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||
Sbjct: 961 agtacaagtacacatccaacaagcatatgcattgctccacaattacataccatcatc 905
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>ref|XM_507384.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
           mRNA
          Length = 1062

 Score =  117 bits (59), Expect = 2e-23
 Identities = 74/79 (93%)
 Strand = Plus / Minus

                                                                       
Query: 192 ttgggggcgaaggcccggaagatggtggcatggccggggtcggcgaggtgagcgaagagg 251
           ||||||| ||||||| ||||||||||||| ||||||||||||||||| || |||||||||
Sbjct: 814 ttgggggtgaaggcctggaagatggtggcgtggccggggtcggcgagatgggcgaagagg 755

                              
Query: 252 ttgtcgatggggccggtgc 270
           |||||||||||||||||||
Sbjct: 754 ttgtcgatggggccggtgc 736



 Score = 44.1 bits (22), Expect = 0.22
 Identities = 47/54 (87%), Gaps = 1/54 (1%)
 Strand = Plus / Minus

                                                                  
Query: 29   acatcggttacaccagagtacaagtacacatccaacaa-gcatgcattgctcca 81
            |||||||||||| || |||||| |||||||  |||||| ||||||| |||||||
Sbjct: 1014 acatcggttacatcatagtacaggtacacaatcaacaaggcatgcagtgctcca 961
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>ref|XM_507383.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
           mRNA
          Length = 1059

 Score =  117 bits (59), Expect = 2e-23
 Identities = 74/79 (93%)
 Strand = Plus / Minus

                                                                       
Query: 192 ttgggggcgaaggcccggaagatggtggcatggccggggtcggcgaggtgagcgaagagg 251
           ||||||| ||||||| ||||||||||||| ||||||||||||||||| || |||||||||
Sbjct: 815 ttgggggtgaaggcctggaagatggtggcgtggccggggtcggcgagatgggcgaagagg 756

                              
Query: 252 ttgtcgatggggccggtgc 270
           |||||||||||||||||||
Sbjct: 755 ttgtcgatggggccggtgc 737



 Score = 44.1 bits (22), Expect = 0.22
 Identities = 47/54 (87%), Gaps = 1/54 (1%)
 Strand = Plus / Minus

                                                                  
Query: 29   acatcggttacaccagagtacaagtacacatccaacaa-gcatgcattgctcca 81
            |||||||||||| || |||||| |||||||  |||||| ||||||| |||||||
Sbjct: 1015 acatcggttacatcatagtacaggtacacaatcaacaaggcatgcagtgctcca 962
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>ref|XM_507382.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
           mRNA
          Length = 1058

 Score =  117 bits (59), Expect = 2e-23
 Identities = 74/79 (93%)
 Strand = Plus / Minus

                                                                       
Query: 192 ttgggggcgaaggcccggaagatggtggcatggccggggtcggcgaggtgagcgaagagg 251
           ||||||| ||||||| ||||||||||||| ||||||||||||||||| || |||||||||
Sbjct: 817 ttgggggtgaaggcctggaagatggtggcgtggccggggtcggcgagatgggcgaagagg 758

                              
Query: 252 ttgtcgatggggccggtgc 270
           |||||||||||||||||||
Sbjct: 757 ttgtcgatggggccggtgc 739



 Score = 44.1 bits (22), Expect = 0.22
 Identities = 47/54 (87%), Gaps = 1/54 (1%)
 Strand = Plus / Minus

                                                                  
Query: 29   acatcggttacaccagagtacaagtacacatccaacaa-gcatgcattgctcca 81
            |||||||||||| || |||||| |||||||  |||||| ||||||| |||||||
Sbjct: 1017 acatcggttacatcatagtacaggtacacaatcaacaaggcatgcagtgctcca 964
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>ref|XM_478841.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1047

 Score =  117 bits (59), Expect = 2e-23
 Identities = 74/79 (93%)
 Strand = Plus / Minus

                                                                       
Query: 192 ttgggggcgaaggcccggaagatggtggcatggccggggtcggcgaggtgagcgaagagg 251
           ||||||| ||||||| ||||||||||||| ||||||||||||||||| || |||||||||
Sbjct: 820 ttgggggtgaaggcctggaagatggtggcgtggccggggtcggcgagatgggcgaagagg 761

                              
Query: 252 ttgtcgatggggccggtgc 270
           |||||||||||||||||||
Sbjct: 760 ttgtcgatggggccggtgc 742



 Score = 44.1 bits (22), Expect = 0.22
 Identities = 47/54 (87%), Gaps = 1/54 (1%)
 Strand = Plus / Minus

                                                                  
Query: 29   acatcggttacaccagagtacaagtacacatccaacaa-gcatgcattgctcca 81
            |||||||||||| || |||||| |||||||  |||||| ||||||| |||||||
Sbjct: 1020 acatcggttacatcatagtacaggtacacaatcaacaaggcatgcagtgctcca 967
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>ref|XM_507381.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
           mRNA
          Length = 1061

 Score =  117 bits (59), Expect = 2e-23
 Identities = 74/79 (93%)
 Strand = Plus / Minus

                                                                       
Query: 192 ttgggggcgaaggcccggaagatggtggcatggccggggtcggcgaggtgagcgaagagg 251
           ||||||| ||||||| ||||||||||||| ||||||||||||||||| || |||||||||
Sbjct: 820 ttgggggtgaaggcctggaagatggtggcgtggccggggtcggcgagatgggcgaagagg 761

                              
Query: 252 ttgtcgatggggccggtgc 270
           |||||||||||||||||||
Sbjct: 760 ttgtcgatggggccggtgc 742



 Score = 44.1 bits (22), Expect = 0.22
 Identities = 47/54 (87%), Gaps = 1/54 (1%)
 Strand = Plus / Minus

                                                                  
Query: 29   acatcggttacaccagagtacaagtacacatccaacaa-gcatgcattgctcca 81
            |||||||||||| || |||||| |||||||  |||||| ||||||| |||||||
Sbjct: 1020 acatcggttacatcatagtacaggtacacaatcaacaaggcatgcagtgctcca 967
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>ref|XM_507380.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
           mRNA
          Length = 1065

 Score =  117 bits (59), Expect = 2e-23
 Identities = 74/79 (93%)
 Strand = Plus / Minus

                                                                       
Query: 192 ttgggggcgaaggcccggaagatggtggcatggccggggtcggcgaggtgagcgaagagg 251
           ||||||| ||||||| ||||||||||||| ||||||||||||||||| || |||||||||
Sbjct: 821 ttgggggtgaaggcctggaagatggtggcgtggccggggtcggcgagatgggcgaagagg 762

                              
Query: 252 ttgtcgatggggccggtgc 270
           |||||||||||||||||||
Sbjct: 761 ttgtcgatggggccggtgc 743



 Score = 44.1 bits (22), Expect = 0.22
 Identities = 47/54 (87%), Gaps = 1/54 (1%)
 Strand = Plus / Minus

                                                                  
Query: 29   acatcggttacaccagagtacaagtacacatccaacaa-gcatgcattgctcca 81
            |||||||||||| || |||||| |||||||  |||||| ||||||| |||||||
Sbjct: 1021 acatcggttacatcatagtacaggtacacaatcaacaaggcatgcagtgctcca 968
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>ref|XM_507379.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
           mRNA
          Length = 1069

 Score =  117 bits (59), Expect = 2e-23
 Identities = 74/79 (93%)
 Strand = Plus / Minus

                                                                       
Query: 192 ttgggggcgaaggcccggaagatggtggcatggccggggtcggcgaggtgagcgaagagg 251
           ||||||| ||||||| ||||||||||||| ||||||||||||||||| || |||||||||
Sbjct: 821 ttgggggtgaaggcctggaagatggtggcgtggccggggtcggcgagatgggcgaagagg 762

                              
Query: 252 ttgtcgatggggccggtgc 270
           |||||||||||||||||||
Sbjct: 761 ttgtcgatggggccggtgc 743



 Score = 44.1 bits (22), Expect = 0.22
 Identities = 47/54 (87%), Gaps = 1/54 (1%)
 Strand = Plus / Minus

                                                                  
Query: 29   acatcggttacaccagagtacaagtacacatccaacaa-gcatgcattgctcca 81
            |||||||||||| || |||||| |||||||  |||||| ||||||| |||||||
Sbjct: 1021 acatcggttacatcatagtacaggtacacaatcaacaaggcatgcagtgctcca 968
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>ref|XM_506426.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
           mRNA
          Length = 1068

 Score =  117 bits (59), Expect = 2e-23
 Identities = 74/79 (93%)
 Strand = Plus / Minus

                                                                       
Query: 192 ttgggggcgaaggcccggaagatggtggcatggccggggtcggcgaggtgagcgaagagg 251
           ||||||| ||||||| ||||||||||||| ||||||||||||||||| || |||||||||
Sbjct: 824 ttgggggtgaaggcctggaagatggtggcgtggccggggtcggcgagatgggcgaagagg 765

                              
Query: 252 ttgtcgatggggccggtgc 270
           |||||||||||||||||||
Sbjct: 764 ttgtcgatggggccggtgc 746



 Score = 44.1 bits (22), Expect = 0.22
 Identities = 47/54 (87%), Gaps = 1/54 (1%)
 Strand = Plus / Minus

                                                                  
Query: 29   acatcggttacaccagagtacaagtacacatccaacaa-gcatgcattgctcca 81
            |||||||||||| || |||||| |||||||  |||||| ||||||| |||||||
Sbjct: 1024 acatcggttacatcatagtacaggtacacaatcaacaaggcatgcagtgctcca 971
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>dbj|AK119176.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-F08, full
           insert sequence
          Length = 1088

 Score =  117 bits (59), Expect = 2e-23
 Identities = 74/79 (93%)
 Strand = Plus / Minus

                                                                       
Query: 192 ttgggggcgaaggcccggaagatggtggcatggccggggtcggcgaggtgagcgaagagg 251
           ||||||| ||||||| ||||||||||||| ||||||||||||||||| || |||||||||
Sbjct: 835 ttgggggtgaaggcctggaagatggtggcgtggccggggtcggcgagatgggcgaagagg 776

                              
Query: 252 ttgtcgatggggccggtgc 270
           |||||||||||||||||||
Sbjct: 775 ttgtcgatggggccggtgc 757



 Score = 44.1 bits (22), Expect = 0.22
 Identities = 47/54 (87%), Gaps = 1/54 (1%)
 Strand = Plus / Minus

                                                                  
Query: 29   acatcggttacaccagagtacaagtacacatccaacaa-gcatgcattgctcca 81
            |||||||||||| || |||||| |||||||  |||||| ||||||| |||||||
Sbjct: 1035 acatcggttacatcatagtacaggtacacaatcaacaaggcatgcagtgctcca 982
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>dbj|AK104651.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-B06, full
           insert sequence
          Length = 1069

 Score =  117 bits (59), Expect = 2e-23
 Identities = 74/79 (93%)
 Strand = Plus / Minus

                                                                       
Query: 192 ttgggggcgaaggcccggaagatggtggcatggccggggtcggcgaggtgagcgaagagg 251
           ||||||| ||||||| ||||||||||||| ||||||||||||||||| || |||||||||
Sbjct: 821 ttgggggtgaaggcctggaagatggtggcgtggccggggtcggcgagatgggcgaagagg 762

                              
Query: 252 ttgtcgatggggccggtgc 270
           |||||||||||||||||||
Sbjct: 761 ttgtcgatggggccggtgc 743



 Score = 44.1 bits (22), Expect = 0.22
 Identities = 47/54 (87%), Gaps = 1/54 (1%)
 Strand = Plus / Minus

                                                                  
Query: 29   acatcggttacaccagagtacaagtacacatccaacaa-gcatgcattgctcca 81
            |||||||||||| || |||||| |||||||  |||||| ||||||| |||||||
Sbjct: 1021 acatcggttacatcatagtacaggtacacaatcaacaaggcatgcagtgctcca 968
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>dbj|AK104608.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C01, full
           insert sequence
          Length = 1065

 Score =  117 bits (59), Expect = 2e-23
 Identities = 74/79 (93%)
 Strand = Plus / Minus

                                                                       
Query: 192 ttgggggcgaaggcccggaagatggtggcatggccggggtcggcgaggtgagcgaagagg 251
           ||||||| ||||||| ||||||||||||| ||||||||||||||||| || |||||||||
Sbjct: 821 ttgggggtgaaggcctggaagatggtggcgtggccggggtcggcgagatgggcgaagagg 762

                              
Query: 252 ttgtcgatggggccggtgc 270
           |||||||||||||||||||
Sbjct: 761 ttgtcgatggggccggtgc 743



 Score = 44.1 bits (22), Expect = 0.22
 Identities = 47/54 (87%), Gaps = 1/54 (1%)
 Strand = Plus / Minus

                                                                  
Query: 29   acatcggttacaccagagtacaagtacacatccaacaa-gcatgcattgctcca 81
            |||||||||||| || |||||| |||||||  |||||| ||||||| |||||||
Sbjct: 1021 acatcggttacatcatagtacaggtacacaatcaacaaggcatgcagtgctcca 968
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>dbj|AK104283.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-H09, full
           insert sequence
          Length = 1080

 Score =  117 bits (59), Expect = 2e-23
 Identities = 74/79 (93%)
 Strand = Plus / Minus

                                                                       
Query: 192 ttgggggcgaaggcccggaagatggtggcatggccggggtcggcgaggtgagcgaagagg 251
           ||||||| ||||||| ||||||||||||| ||||||||||||||||| || |||||||||
Sbjct: 851 ttgggggtgaaggcctggaagatggtggcgtggccggggtcggcgagatgggcgaagagg 792

                              
Query: 252 ttgtcgatggggccggtgc 270
           |||||||||||||||||||
Sbjct: 791 ttgtcgatggggccggtgc 773



 Score = 44.1 bits (22), Expect = 0.22
 Identities = 47/54 (87%), Gaps = 1/54 (1%)
 Strand = Plus / Minus

                                                                  
Query: 29   acatcggttacaccagagtacaagtacacatccaacaa-gcatgcattgctcca 81
            |||||||||||| || |||||| |||||||  |||||| ||||||| |||||||
Sbjct: 1049 acatcggttacatcatagtacaggtacacaatcaacaaggcatgcagtgctcca 996
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>dbj|AK104177.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D02, full
           insert sequence
          Length = 1058

 Score =  117 bits (59), Expect = 2e-23
 Identities = 74/79 (93%)
 Strand = Plus / Minus

                                                                       
Query: 192 ttgggggcgaaggcccggaagatggtggcatggccggggtcggcgaggtgagcgaagagg 251
           ||||||| ||||||| ||||||||||||| ||||||||||||||||| || |||||||||
Sbjct: 817 ttgggggtgaaggcctggaagatggtggcgtggccggggtcggcgagatgggcgaagagg 758

                              
Query: 252 ttgtcgatggggccggtgc 270
           |||||||||||||||||||
Sbjct: 757 ttgtcgatggggccggtgc 739



 Score = 44.1 bits (22), Expect = 0.22
 Identities = 47/54 (87%), Gaps = 1/54 (1%)
 Strand = Plus / Minus

                                                                  
Query: 29   acatcggttacaccagagtacaagtacacatccaacaa-gcatgcattgctcca 81
            |||||||||||| || |||||| |||||||  |||||| ||||||| |||||||
Sbjct: 1017 acatcggttacatcatagtacaggtacacaatcaacaaggcatgcagtgctcca 964
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>dbj|AK104127.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-E10, full
           insert sequence
          Length = 1061

 Score =  117 bits (59), Expect = 2e-23
 Identities = 74/79 (93%)
 Strand = Plus / Minus

                                                                       
Query: 192 ttgggggcgaaggcccggaagatggtggcatggccggggtcggcgaggtgagcgaagagg 251
           ||||||| ||||||| ||||||||||||| ||||||||||||||||| || |||||||||
Sbjct: 820 ttgggggtgaaggcctggaagatggtggcgtggccggggtcggcgagatgggcgaagagg 761

                              
Query: 252 ttgtcgatggggccggtgc 270
           |||||||||||||||||||
Sbjct: 760 ttgtcgatggggccggtgc 742



 Score = 44.1 bits (22), Expect = 0.22
 Identities = 47/54 (87%), Gaps = 1/54 (1%)
 Strand = Plus / Minus

                                                                  
Query: 29   acatcggttacaccagagtacaagtacacatccaacaa-gcatgcattgctcca 81
            |||||||||||| || |||||| |||||||  |||||| ||||||| |||||||
Sbjct: 1020 acatcggttacatcatagtacaggtacacaatcaacaaggcatgcagtgctcca 967
to top
>dbj|AK104016.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-G05, full
           insert sequence
          Length = 1062

 Score =  117 bits (59), Expect = 2e-23
 Identities = 74/79 (93%)
 Strand = Plus / Minus

                                                                       
Query: 192 ttgggggcgaaggcccggaagatggtggcatggccggggtcggcgaggtgagcgaagagg 251
           ||||||| ||||||| ||||||||||||| ||||||||||||||||| || |||||||||
Sbjct: 814 ttgggggtgaaggcctggaagatggtggcgtggccggggtcggcgagatgggcgaagagg 755

                              
Query: 252 ttgtcgatggggccggtgc 270
           |||||||||||||||||||
Sbjct: 754 ttgtcgatggggccggtgc 736



 Score = 44.1 bits (22), Expect = 0.22
 Identities = 47/54 (87%), Gaps = 1/54 (1%)
 Strand = Plus / Minus

                                                                  
Query: 29   acatcggttacaccagagtacaagtacacatccaacaa-gcatgcattgctcca 81
            |||||||||||| || |||||| |||||||  |||||| ||||||| |||||||
Sbjct: 1014 acatcggttacatcatagtacaggtacacaatcaacaaggcatgcagtgctcca 961
to top
>dbj|AK103966.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-H03, full
           insert sequence
          Length = 1059

 Score =  117 bits (59), Expect = 2e-23
 Identities = 74/79 (93%)
 Strand = Plus / Minus

                                                                       
Query: 192 ttgggggcgaaggcccggaagatggtggcatggccggggtcggcgaggtgagcgaagagg 251
           ||||||| ||||||| ||||||||||||| ||||||||||||||||| || |||||||||
Sbjct: 815 ttgggggtgaaggcctggaagatggtggcgtggccggggtcggcgagatgggcgaagagg 756

                              
Query: 252 ttgtcgatggggccggtgc 270
           |||||||||||||||||||
Sbjct: 755 ttgtcgatggggccggtgc 737



 Score = 44.1 bits (22), Expect = 0.22
 Identities = 47/54 (87%), Gaps = 1/54 (1%)
 Strand = Plus / Minus

                                                                  
Query: 29   acatcggttacaccagagtacaagtacacatccaacaa-gcatgcattgctcca 81
            |||||||||||| || |||||| |||||||  |||||| ||||||| |||||||
Sbjct: 1015 acatcggttacatcatagtacaggtacacaatcaacaaggcatgcagtgctcca 962
to top
>dbj|AK060987.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C01, full
           insert sequence
          Length = 1068

 Score =  117 bits (59), Expect = 2e-23
 Identities = 74/79 (93%)
 Strand = Plus / Minus

                                                                       
Query: 192 ttgggggcgaaggcccggaagatggtggcatggccggggtcggcgaggtgagcgaagagg 251
           ||||||| ||||||| ||||||||||||| ||||||||||||||||| || |||||||||
Sbjct: 824 ttgggggtgaaggcctggaagatggtggcgtggccggggtcggcgagatgggcgaagagg 765

                              
Query: 252 ttgtcgatggggccggtgc 270
           |||||||||||||||||||
Sbjct: 764 ttgtcgatggggccggtgc 746



 Score = 44.1 bits (22), Expect = 0.22
 Identities = 47/54 (87%), Gaps = 1/54 (1%)
 Strand = Plus / Minus

                                                                  
Query: 29   acatcggttacaccagagtacaagtacacatccaacaa-gcatgcattgctcca 81
            |||||||||||| || |||||| |||||||  |||||| ||||||| |||||||
Sbjct: 1024 acatcggttacatcatagtacaggtacacaatcaacaaggcatgcagtgctcca 971
to top
>gb|AY105356.1| Zea mays PCO075138 mRNA sequence
          Length = 1317

 Score =  117 bits (59), Expect = 2e-23
 Identities = 74/79 (93%)
 Strand = Plus / Minus

                                                                       
Query: 192 ttgggggcgaaggcccggaagatggtggcatggccggggtcggcgaggtgagcgaagagg 251
           ||||||| ||||||| ||||||||||||| ||||| |||||||||||||| |||||||||
Sbjct: 967 ttgggggtgaaggcctggaagatggtggcgtggccagggtcggcgaggtgggcgaagagg 908

                              
Query: 252 ttgtcgatggggccggtgc 270
           |||||||||||||||||||
Sbjct: 907 ttgtcgatggggccggtgc 889
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  101 bits (51), Expect = 1e-18
 Identities = 60/63 (95%)
 Strand = Plus / Minus

                                                                            
Query: 208      ggaagatggtggcatggccggggtcggcgaggtgagcgaagaggttgtcgatggggccgg 267
                ||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 23305312 ggaagatggtggcgtggccggggtcggcgagatgggcgaagaggttgtcgatggggccgg 23305253

                   
Query: 268      tgc 270
                |||
Sbjct: 23305252 tgc 23305250



 Score = 44.1 bits (22), Expect = 0.22
 Identities = 47/54 (87%), Gaps = 1/54 (1%)
 Strand = Plus / Minus

                                                                      
Query: 29       acatcggttacaccagagtacaagtacacatccaacaa-gcatgcattgctcca 81
                |||||||||||| || |||||| |||||||  |||||| ||||||| |||||||
Sbjct: 23305742 acatcggttacatcatagtacaggtacacaatcaacaaggcatgcagtgctcca 23305689
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>dbj|AP003804.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1065_B06
          Length = 113170

 Score =  101 bits (51), Expect = 1e-18
 Identities = 60/63 (95%)
 Strand = Plus / Minus

                                                                         
Query: 208   ggaagatggtggcatggccggggtcggcgaggtgagcgaagaggttgtcgatggggccgg 267
             ||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 60570 ggaagatggtggcgtggccggggtcggcgagatgggcgaagaggttgtcgatggggccgg 60511

                
Query: 268   tgc 270
             |||
Sbjct: 60510 tgc 60508



 Score = 44.1 bits (22), Expect = 0.22
 Identities = 47/54 (87%), Gaps = 1/54 (1%)
 Strand = Plus / Minus

                                                                   
Query: 29    acatcggttacaccagagtacaagtacacatccaacaa-gcatgcattgctcca 81
             |||||||||||| || |||||| |||||||  |||||| ||||||| |||||||
Sbjct: 61000 acatcggttacatcatagtacaggtacacaatcaacaaggcatgcagtgctcca 60947
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>dbj|AK070051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040A06, full
            insert sequence
          Length = 1646

 Score =  101 bits (51), Expect = 1e-18
 Identities = 60/63 (95%)
 Strand = Plus / Minus

                                                                        
Query: 208  ggaagatggtggcatggccggggtcggcgaggtgagcgaagaggttgtcgatggggccgg 267
            ||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 1095 ggaagatggtggcgtggccggggtcggcgagatgggcgaagaggttgtcgatggggccgg 1036

               
Query: 268  tgc 270
            |||
Sbjct: 1035 tgc 1033



 Score = 44.1 bits (22), Expect = 0.22
 Identities = 47/54 (87%), Gaps = 1/54 (1%)
 Strand = Plus / Minus

                                                                  
Query: 29   acatcggttacaccagagtacaagtacacatccaacaa-gcatgcattgctcca 81
            |||||||||||| || |||||| |||||||  |||||| ||||||| |||||||
Sbjct: 1525 acatcggttacatcatagtacaggtacacaatcaacaaggcatgcagtgctcca 1472
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>gb|AF010321.1|AF010321 Oryza sativa photosystem I antenna protein (Lhca) mRNA, complete
           cds
          Length = 1066

 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 68/79 (86%)
 Strand = Plus / Minus

                                                                       
Query: 192 ttgggggcgaaggcccggaagatggtggcatggccggggtcggcgaggtgagcgaagagg 251
           ||||||| ||||||| |||| |||||||| ||||||||||| || |  || ||||| | |
Sbjct: 794 ttgggggtgaaggcctggaaaatggtggcgtggccggggtctgctacatgggcgaaaaag 735

                              
Query: 252 ttgtcgatggggccggtgc 270
           |||||||||||||||||||
Sbjct: 734 ttgtcgatggggccggtgc 716



 Score = 44.1 bits (22), Expect = 0.22
 Identities = 47/54 (87%), Gaps = 1/54 (1%)
 Strand = Plus / Minus

                                                                 
Query: 29  acatcggttacaccagagtacaagtacacatccaacaa-gcatgcattgctcca 81
           |||||||||||| || |||||| |||||||  |||||| ||||||| |||||||
Sbjct: 994 acatcggttacatcatagtacaggtacacaatcaacaaggcatgcagtgctcca 941
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>gb|AY105333.1| Zea mays PCO095488 mRNA sequence
          Length = 794

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                       
Query: 222 tggccggggtcggcgaggtgagcgaagaggttgtcgatggggcc 265
           |||||||||||||||||||| ||||  |||||||||||||||||
Sbjct: 433 tggccggggtcggcgaggtgcgcgagcaggttgtcgatggggcc 390
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>gb|AC135564.4| Oryza sativa chromosome 3 BAC OSJNBb0056O10 genomic sequence, complete
             sequence
          Length = 139771

 Score = 48.1 bits (24), Expect = 0.014
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 226   cggggtcggcgaggtgagcgaagaggttgtcgatggggcc 265
             |||||||||||| |||  |||||||||| |||||||||||
Sbjct: 79022 cggggtcggcgacgtggtcgaagaggttctcgatggggcc 79061
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 48.1 bits (24), Expect = 0.014
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                        
Query: 226      cggggtcggcgaggtgagcgaagaggttgtcgatggggcc 265
                |||||||||||| |||  |||||||||| |||||||||||
Sbjct: 21808794 cggggtcggcgacgtggtcgaagaggttctcgatggggcc 21808755
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 48.1 bits (24), Expect = 0.014
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                        
Query: 226      cggggtcggcgaggtgagcgaagaggttgtcgatggggcc 265
                |||||||||||| |||  |||||||||| |||||||||||
Sbjct: 21801823 cggggtcggcgacgtggtcgaagaggttctcgatggggcc 21801784
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>emb|X68682.1|ZMLHCB Z.mays mRNA for type II light-harvesting chlorophyll a/b-binding
           protein
          Length = 1126

 Score = 48.1 bits (24), Expect = 0.014
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 226 cggggtcggcgaggtgagcgaagaggttgtcgatggggcc 265
           |||||||||||| |||  |||||||||| |||||||||||
Sbjct: 778 cggggtcggcgacgtggtcgaagaggttctcgatggggcc 739
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>dbj|AK066762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075I09, full
           insert sequence
          Length = 1106

 Score = 48.1 bits (24), Expect = 0.014
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 226 cggggtcggcgaggtgagcgaagaggttgtcgatggggcc 265
           |||||||||||| |||  |||||||||| |||||||||||
Sbjct: 793 cggggtcggcgacgtggtcgaagaggttctcgatggggcc 754
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>gb|AY112240.1| Zea mays CL187_6 mRNA sequence
          Length = 770

 Score = 48.1 bits (24), Expect = 0.014
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 226 cggggtcggcgaggtgagcgaagaggttgtcgatggggcc 265
           |||||||||||| |||  |||||||||| |||||||||||
Sbjct: 426 cggggtcggcgacgtggtcgaagaggttctcgatggggcc 387
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>dbj|AK058315.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-A06, full
           insert sequence
          Length = 685

 Score = 48.1 bits (24), Expect = 0.014
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 226 cggggtcggcgaggtgagcgaagaggttgtcgatggggcc 265
           |||||||||||| |||  |||||||||| |||||||||||
Sbjct: 368 cggggtcggcgacgtggtcgaagaggttctcgatggggcc 329
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>gb|AF061577.1|AF061577 Oryza sativa chlorophyll a/b binding protein (RCABP89) mRNA,
           nuclear gene encoding chloroplast protein, complete cds
          Length = 1027

 Score = 48.1 bits (24), Expect = 0.014
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 226 cggggtcggcgaggtgagcgaagaggttgtcgatggggcc 265
           |||||||||||| |||  |||||||||| |||||||||||
Sbjct: 782 cggggtcggcgacgtggtcgaagaggttctcgatggggcc 743
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>dbj|AK105002.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-005-E07, full
            insert sequence
          Length = 1568

 Score = 46.1 bits (23), Expect = 0.057
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 192  ttgggggcgaaggcccggaagatggtggcatggcc 226
            ||||||| ||||||| ||||||||||||| |||||
Sbjct: 1343 ttgggggtgaaggcctggaagatggtggcgtggcc 1309



 Score = 44.1 bits (22), Expect = 0.22
 Identities = 47/54 (87%), Gaps = 1/54 (1%)
 Strand = Plus / Minus

                                                                  
Query: 29   acatcggttacaccagagtacaagtacacatccaacaa-gcatgcattgctcca 81
            |||||||||||| || |||||| |||||||  |||||| ||||||| |||||||
Sbjct: 1543 acatcggttacatcatagtacaggtacacaatcaacaaggcatgcagtgctcca 1490
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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 231     tcggcgaggtgagcgaagagg 251
               |||||||||||||||||||||
Sbjct: 2896410 tcggcgaggtgagcgaagagg 2896390
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 222      tggccggggtcggcgaggtga 242
                |||||||||||||||||||||
Sbjct: 16234704 tggccggggtcggcgaggtga 16234684
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>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1344_B01
          Length = 170912

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 222   tggccggggtcggcgaggtga 242
             |||||||||||||||||||||
Sbjct: 51220 tggccggggtcggcgaggtga 51200
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>dbj|AP005424.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0556H01
          Length = 149800

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 222    tggccggggtcggcgaggtga 242
              |||||||||||||||||||||
Sbjct: 139305 tggccggggtcggcgaggtga 139285
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>dbj|AK067780.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013114F21, full
           insert sequence
          Length = 919

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 222 tggccggggtcggcgaggtga 242
           |||||||||||||||||||||
Sbjct: 827 tggccggggtcggcgaggtga 807
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>gb|AC166075.2| Mus musculus BAC clone RP23-143L15 from chromosome 1, complete sequence
          Length = 212447

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 103    gggaaaaataatctaattcc 122
              ||||||||||||||||||||
Sbjct: 194563 gggaaaaataatctaattcc 194582
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>gb|AF441790.2| Synechococcus sp. PCC 7942 plasmid pANL, complete sequence
          Length = 46366

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 113   atctaattccaccagcgatc 132
             ||||||||||||||||||||
Sbjct: 16590 atctaattccaccagcgatc 16609
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>gb|AC129567.8| Mus musculus chromosome 8, clone RP23-50L10, complete sequence
          Length = 228046

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 51    agtacacatccaacaagcatgcat 74
             ||||||||| ||||||||||||||
Sbjct: 91116 agtacacatacaacaagcatgcat 91093
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>emb|AL034374.2|HS483K16 Human DNA sequence from clone RP3-483K16 on chromosome 6p12.1-21.1
             Contains the gene for homolog of yeast long chain
             polyunsaturated fatty acid elongation enzyme 2 (HELO1), a
             40S Ribosomal protein (RPS16) pseudogene, a 60S Ribosomal
             protein (RPL31) pseudogene and CpG islands, complete
             sequence
          Length = 101270

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 160   gatttgttgctaactcccaa 179
             ||||||||||||||||||||
Sbjct: 96139 gatttgttgctaactcccaa 96158
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 244     cgaagaggttgtcgatggggccgg 267
               |||| |||||||||||||||||||
Sbjct: 2794630 cgaacaggttgtcgatggggccgg 2794653
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>gb|AC137555.4| Mus musculus BAC clone RP23-445B17 from 1, complete sequence
          Length = 174607

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   gggaaaaataatctaattcc 122
             ||||||||||||||||||||
Sbjct: 64988 gggaaaaataatctaattcc 65007
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>gb|U70379.1|SSU70379 Synechococcus PCC7942 NarL homolog, histidine protein kinase and
            response regulator genes complete cds
          Length = 5275

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 113  atctaattccaccagcgatc 132
            ||||||||||||||||||||
Sbjct: 2858 atctaattccaccagcgatc 2877
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>gb|L23107.1|GBICABBP Ginkgo biloba nuclear-encoded chloroplast chlorophyll a/b binding
           protein mRNA, complete cds
          Length = 997

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 226 cggggtcggcgaggtgagcgaagaggttgtcgatggggcc 265
           ||||||||||||||||  ||  |||||| |||||||||||
Sbjct: 821 cggggtcggcgaggtggtcggcgaggttctcgatggggcc 782
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>gb|CP000101.1| Synechococcus elongatus PCC 7942 plasmid 1, complete sequence
          Length = 46366

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 113   atctaattccaccagcgatc 132
             ||||||||||||||||||||
Sbjct: 41256 atctaattccaccagcgatc 41275
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>gb|M95068.1|MZEORFI Zea mays putative light-harvesting chlorophyll A/B binding  protein
           mRNA, partial cds
          Length = 191

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 34/40 (85%)
 Strand = Plus / Minus

                                                   
Query: 226 cggggtcggcgaggtgagcgaagaggttgtcgatggggcc 265
           |||||||||  | |||  |||||||||| |||||||||||
Sbjct: 60  cggggtcggssacgtggtcgaagaggttctcgatggggcc 21
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>dbj|D00642.1|RICLHCP2 Oryza sativa (japonica cultivar-group) mRNA for type II
           light-harvesting chlorophyll a/b binding protein of
           photosystem II (LHCPII), complete cds
          Length = 989

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 226 cggggtcggcgaggtgagcgaagaggttgtcgatggggcc 265
           ||||||||| || |||  |||||||||| |||||||||||
Sbjct: 774 cggggtcggtgacgtggtcgaagaggttctcgatggggcc 735


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,762,615
Number of Sequences: 3902068
Number of extensions: 1762615
Number of successful extensions: 29674
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 29490
Number of HSP's gapped (non-prelim): 181
length of query: 270
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 248
effective length of database: 17,147,199,772
effective search space: 4252505543456
effective search space used: 4252505543456
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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