ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet90h08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC069233.16| Homo sapiens 3 BAC RP11-95H16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 154204 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 117 aatacaagaataaaaatgaaagaaaaagt 145 ||||||||||||||||||||| ||||||| Sbjct: 88473 aatacaagaataaaaatgaaataaaaagt 88501
>gb|DQ334607.1| Oikopleura dioica OctB (POU3) gene, complete cds Length = 16245 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 122 aagaataaaaatgaaagaaaaagt 145 |||||||||||||||||||||||| Sbjct: 13223 aagaataaaaatgaaagaaaaagt 13246
>gb|AC106728.6| Homo sapiens 3 BAC RP11-319J24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 193623 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Minus Query: 125 aataaaaatgaaagaaaaagtga 147 ||||||||||||||||||||||| Sbjct: 22371 aataaaaatgaaagaaaaagtga 22349
>gb|AC175749.2| Pan troglodytes BAC clone CH251-1124N9 from chromosome y, complete sequence Length = 176979 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 122 aagaataaaaatgaaagaaaaa 143 |||||||||||||||||||||| Sbjct: 172995 aagaataaaaatgaaagaaaaa 172974
>gb|AC124962.19| Medicago truncatula clone mth2-24d19, complete sequence Length = 126541 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 122 aagaataaaaatgaaagaaaaa 143 |||||||||||||||||||||| Sbjct: 84197 aagaataaaaatgaaagaaaaa 84176
>gb|AC123975.16| Medicago truncatula clone mth2-12m13, complete sequence Length = 121884 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 122 aagaataaaaatgaaagaaaaa 143 |||||||||||||||||||||| Sbjct: 114548 aagaataaaaatgaaagaaaaa 114569
>gb|AC074020.4| Homo sapiens BAC clone RP11-341A4 from 2, complete sequence Length = 147512 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 122 aagaataaaaatgaaagaaaaa 143 |||||||||||||||||||||| Sbjct: 129649 aagaataaaaatgaaagaaaaa 129670
>gb|AC158641.12| Mus musculus 10 BAC RP23-461E22 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 186390 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 tcctcttctgtcttgtcttgg 273 ||||||||||||||||||||| Sbjct: 109402 tcctcttctgtcttgtcttgg 109382
>gb|AC110509.21| Mus musculus chromosome 8, clone RP24-423G4, complete sequence Length = 190160 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 tgttctcctcctcttctgtct 265 ||||||||||||||||||||| Sbjct: 166145 tgttctcctcctcttctgtct 166165
>gb|AC158316.3| Mus musculus chromosome 8, clone RP23-189N8, complete sequence Length = 183192 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 245 tgttctcctcctcttctgtct 265 ||||||||||||||||||||| Sbjct: 167218 tgttctcctcctcttctgtct 167198
>gb|AC123936.4| Mus musculus BAC clone RP23-408L3 from chromosome 15, complete sequence Length = 221204 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 caagaataaaaatgaaagaaa 141 ||||||||||||||||||||| Sbjct: 214756 caagaataaaaatgaaagaaa 214776
>ref|XM_721086.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY05683) partial mRNA Length = 1743 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 tctgaatacaagaataaaaat 133 ||||||||||||||||||||| Sbjct: 415 tctgaatacaagaataaaaat 435
>gb|AC155317.5| Mus musculus BAC clone RP23-89D6 from chromosome 15, complete sequence Length = 251377 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 caagaataaaaatgaaagaaa 141 ||||||||||||||||||||| Sbjct: 29263 caagaataaaaatgaaagaaa 29283
>emb|AL591435.10| Human DNA sequence from clone RP11-712I22 on chromosome X, complete sequence Length = 138038 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 126 ataaaaatgaaagaaaaagtg 146 ||||||||||||||||||||| Sbjct: 29722 ataaaaatgaaagaaaaagtg 29702
>gb|AC084024.17| Homo sapiens chromosome 8, clone RP11-90P5, complete sequence Length = 135404 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 122 aagaataaaaatgaaagaaaa 142 ||||||||||||||||||||| Sbjct: 36158 aagaataaaaatgaaagaaaa 36178
>emb|X65256.1|XLCFTRM X.laevis CFTR mRNA Length = 4455 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 aatacaagaataaaaatgaaa 137 ||||||||||||||||||||| Sbjct: 2600 aatacaagaataaaaatgaaa 2580
>emb|AL606783.13| Mouse DNA sequence from clone RP23-374O23 on chromosome 13 Contains part of the gene for a novel protein similar to axonemal dynein heavy polypeptide (DNAH), complete sequence Length = 127451 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 140 aaaagtgagcagagagaaagc 160 ||||||||||||||||||||| Sbjct: 65589 aaaagtgagcagagagaaagc 65609
>gb|AF298148.1| Lagos bat virus isolate LagNGA antigenic glycoprotein gene, complete cds Length = 2329 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 348 cttgtgataatctctccaagc 368 ||||||||||||||||||||| Sbjct: 707 cttgtgataatctctccaagc 727
>gb|AC104162.2| Homo sapiens chromosome 3 clone RP11-50F24, complete sequence Length = 178337 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 162 tttctcaaatttctctgcatatatt 186 |||||||||||||||||||| |||| Sbjct: 27188 tttctcaaatttctctgcatttatt 27164
>gb|AC010362.6| Homo sapiens chromosome 5 clone CTD-2037I18, complete sequence Length = 133769 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 114 ctgaatacaagaataaaaatg 134 ||||||||||||||||||||| Sbjct: 46750 ctgaatacaagaataaaaatg 46730
>gb|AC008471.7| Homo sapiens chromosome 5 clone CTC-366N20, complete sequence Length = 152116 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 114 ctgaatacaagaataaaaatg 134 ||||||||||||||||||||| Sbjct: 41434 ctgaatacaagaataaaaatg 41454
>gb|AC011065.6| Drosophila melanogaster, chromosome 2L, region 33B-33B, BAC clone BACR37P12, complete sequence Length = 181103 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 aaaaatgaaagaaaaagtgag 148 ||||||||||||||||||||| Sbjct: 10693 aaaaatgaaagaaaaagtgag 10673
>gb|AC158601.5| Mus musculus 10 BAC RP23-119L9 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 249420 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 tcctcttctgtcttgtcttgg 273 ||||||||||||||||||||| Sbjct: 207158 tcctcttctgtcttgtcttgg 207178
>gb|AC093199.1| Drosophila melanogaster, chromosome 2L, region 33A-33A, BAC clone BACR05B13, complete sequence Length = 168641 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 aaaaatgaaagaaaaagtgag 148 ||||||||||||||||||||| Sbjct: 8967 aaaaatgaaagaaaaagtgag 8987
>gb|AC010429.6|AC010429 Homo sapiens chromosome 5 clone CTD-2199L14, complete sequence Length = 133769 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 114 ctgaatacaagaataaaaatg 134 ||||||||||||||||||||| Sbjct: 46750 ctgaatacaagaataaaaatg 46730
>emb|AL671861.13| Mouse DNA sequence from clone RP23-160B4 on chromosome X, complete sequence Length = 199760 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 tacaagaataaaaatgaaagaaaaa 143 ||||||||||||||| ||||||||| Sbjct: 79440 tacaagaataaaaataaaagaaaaa 79416
>gb|AE003634.2| Drosophila melanogaster chromosome 2L, section 43 of 83 of the complete sequence Length = 265341 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 aaaaatgaaagaaaaagtgag 148 ||||||||||||||||||||| Sbjct: 45462 aaaaatgaaagaaaaagtgag 45442
>gb|AC006240.1|AC006240 Drosophila melanogaster, chromosome 2L, region 33A3-33B2, P1 clones DS06189, DS04362, and DS07071, complete sequence Length = 170056 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 aaaaatgaaagaaaaagtgag 148 ||||||||||||||||||||| Sbjct: 94316 aaaaatgaaagaaaaagtgag 94336
>gb|U60209.1|XLU60209 Xenopus laevis cystic fibrosis transmembrane conductance regulator (CFTR) mRNA, partial cds Length = 4455 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 aatacaagaataaaaatgaaa 137 ||||||||||||||||||||| Sbjct: 2600 aatacaagaataaaaatgaaa 2580
>gb|AF429312.1| Lagos bat virus glycoprotein mRNA, complete cds Length = 1569 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 348 cttgtgataatctctccaagc 368 ||||||||||||||||||||| Sbjct: 451 cttgtgataatctctccaagc 471
>gb|AC012557.23| Homo sapiens 3 BAC RP11-245J9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 189220 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 162 tttctcaaatttctctgcatatatt 186 |||||||||||||||||||| |||| Sbjct: 31472 tttctcaaatttctctgcatttatt 31496
>dbj|AP000065.1| Homo sapiens genomic DNA, chromosome 8p11.2, senescence gene region, section 1/19 Length = 100000 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 122 aagaataaaaatgaaagaaaa 142 ||||||||||||||||||||| Sbjct: 24575 aagaataaaaatgaaagaaaa 24555
>ref|NM_129022.3| Arabidopsis thaliana AIR9; protein binding AT2G34680 (AIR9) mRNA, complete cds Length = 5646 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 atctccaacccccttgagaa 38 |||||||||||||||||||| Sbjct: 2336 atctccaacccccttgagaa 2317
>gb|AC166101.4| Mus musculus BAC clone RP23-385P23 from chromosome 6, complete sequence Length = 223116 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 aataaaaatgaaagaaaaag 144 |||||||||||||||||||| Sbjct: 150736 aataaaaatgaaagaaaaag 150755
>ref|XM_511832.1| PREDICTED: Pan troglodytes similar to dynein, axonemal, heavy polypeptide 9 isoform 2; dynein, axonemal, light intermediate chain 1; dynein, axonemal, heavy polypeptide 17-like; ciliary dynein heavy chain (LOC455066), mRNA Length = 8054 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 aaagtgagcagagagaaagc 160 |||||||||||||||||||| Sbjct: 4786 aaagtgagcagagagaaagc 4805
>ref|NM_001372.2| Homo sapiens dynein, axonemal, heavy polypeptide 9 (DNAH9), transcript variant 2, mRNA Length = 13748 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 aaagtgagcagagagaaagc 160 |||||||||||||||||||| Sbjct: 9417 aaagtgagcagagagaaagc 9436
>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete sequence Length = 1194300 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 121 caagaataaaaatgaaagaaaaag 144 |||||||||||| ||||||||||| Sbjct: 236186 caagaataaaaaagaaagaaaaag 236163
>gb|AF025467.1| Caenorhabditis elegans cosmid R148, complete sequence Length = 37154 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 aaaatgaaagaaaaagtgag 148 |||||||||||||||||||| Sbjct: 8692 aaaatgaaagaaaaagtgag 8673
>gb|AC105152.10| Mus musculus chromosome 1, clone RP23-265D3, complete sequence Length = 230407 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 agaataaaaatgaaagaaaa 142 |||||||||||||||||||| Sbjct: 30545 agaataaaaatgaaagaaaa 30564
>gb|AC146430.4| Pan troglodytes BAC clone RP43-21F8 from 7, complete sequence Length = 179251 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 aagaaaaagtgagcagagagaaag 159 |||||||||||||||| ||||||| Sbjct: 90222 aagaaaaagtgagcagggagaaag 90245
>gb|AC120791.13| Mus musculus chromosome 7, clone RP23-56I4, complete sequence Length = 246249 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 gaataaaaatgaaagaaaaa 143 |||||||||||||||||||| Sbjct: 106815 gaataaaaatgaaagaaaaa 106796
>gb|BC007475.1| Mus musculus forkhead box I1, mRNA (cDNA clone MGC:6438 IMAGE:3601768), complete cds Length = 2390 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 aaagctcaaaccaggaacca 327 |||||||||||||||||||| Sbjct: 1445 aaagctcaaaccaggaacca 1426
>gb|AC124826.8| Mus musculus chromosome 12, clone RP23-455F18, complete sequence Length = 177979 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 aagaataaaaatgaaagaaaaagt 145 ||||||||||| |||||||||||| Sbjct: 44656 aagaataaaaaagaaagaaaaagt 44633
>ref|XM_904185.1| PREDICTED: Mus musculus similar to Ciliary dynein heavy chain 9 (Axonemal beta dynein heavy chain 9) (LOC630611), mRNA Length = 243 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 aaaagtgagcagagagaaag 159 |||||||||||||||||||| Sbjct: 108 aaaagtgagcagagagaaag 127
>ref|XM_991407.1| PREDICTED: Mus musculus dynein, axonemal, heavy chain 9 (Dnahc9), mRNA Length = 13774 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 aaagtgagcagagagaaagc 160 |||||||||||||||||||| Sbjct: 9427 aaagtgagcagagagaaagc 9446
>ref|XM_917040.2| PREDICTED: Mus musculus dynein, axonemal, heavy chain 9, transcript variant 5 (Dnahc9), mRNA Length = 13774 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 aaagtgagcagagagaaagc 160 |||||||||||||||||||| Sbjct: 9427 aaagtgagcagagagaaagc 9446
>ref|XM_110968.7| PREDICTED: Mus musculus dynein, axonemal, heavy chain 9, transcript variant 1 (Dnahc9), mRNA Length = 13774 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 aaagtgagcagagagaaagc 160 |||||||||||||||||||| Sbjct: 9427 aaagtgagcagagagaaagc 9446
>emb|AL023841.1|CEY43C5B Caenorhabditis elegans YAC Y43C5B, complete sequence Length = 14466 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 gaataaaaatgaaagaaaaa 143 |||||||||||||||||||| Sbjct: 8570 gaataaaaatgaaagaaaaa 8551
>gb|AC025260.29| Homo sapiens 12 BAC RP11-356O22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164872 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 tctcctcctcttctgtcttg 267 |||||||||||||||||||| Sbjct: 148720 tctcctcctcttctgtcttg 148701
>emb|CR954187.2| Medicago truncatula chromosome 5 clone mth2-181i2, COMPLETE SEQUENCE Length = 128654 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 ataaaaatgaaagaaaaagt 145 |||||||||||||||||||| Sbjct: 73339 ataaaaatgaaagaaaaagt 73320
>ref|XM_502802.1| Yarrowia lipolytica CLIB122, YALI0D13772g predicted mRNA Length = 1368 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 catgtgttctcctcctcttc 260 |||||||||||||||||||| Sbjct: 1056 catgtgttctcctcctcttc 1037
>emb|AL359012.7| Human DNA sequence from clone RP11-339I10 on chromosome 13 Contains ESTs, STSs and GSSs, complete sequence Length = 176446 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 gaataaaaatgaaagaaaaa 143 |||||||||||||||||||| Sbjct: 47189 gaataaaaatgaaagaaaaa 47170
>emb|AL135793.13| Human DNA sequence from clone RP11-296H2 on chromosome 10 Contains the 3' end of the TACC2 gene for transforming, acidic coiled-coil containing protein 2 (AZU-1), the gene for a novel protein (FLJ25359) and two CpG islands, complete sequence Length = 213861 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 tccccttccatgggatctcc 348 |||||||||||||||||||| Sbjct: 54078 tccccttccatgggatctcc 54059
>emb|AL022343.6|HS608E8 Human DNA sequence from clone RP4-608E8 on chromosome 6p22.1-22.3 Contains the 5' end of the DTNBP1 gene for dystobrevin binding protein 1 and a CpG island, complete sequence Length = 92143 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 aagaataaaaatgaaagaaa 141 |||||||||||||||||||| Sbjct: 89388 aagaataaaaatgaaagaaa 89369
>gb|AC087883.12| Homo sapiens 12q BAC RP11-335M9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161166 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 aagaataaaaatgaaagaaaaagt 145 |||||||||||||||| ||||||| Sbjct: 143814 aagaataaaaatgaaaaaaaaagt 143791
>emb|AL596025.22| Mouse DNA sequence from clone RP23-215H18 on chromosome 11 Contains a novel gene and the 3' end of a gene that is a possible ortholog of human dynein axonemal heavy polypeptide 9 (DNAH9), complete sequence Length = 190066 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 aaagtgagcagagagaaagc 160 |||||||||||||||||||| Sbjct: 152143 aaagtgagcagagagaaagc 152124
>gb|AC007269.3| Homo sapiens PAC clone RP5-1058P19 from 7, complete sequence Length = 93011 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 136 aagaaaaagtgagcagagagaaag 159 |||||||||||||||| ||||||| Sbjct: 26620 aagaaaaagtgagcagggagaaag 26597
>emb|AL671971.8| Mouse DNA sequence from clone RP23-32J15 on chromosome 11 Contains the Foxi1 gene for forkhead box I1 and the 3' end of the Dock2 gene for dedicator of cyto-kinesis 2, complete sequence Length = 203257 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 aaagctcaaaccaggaacca 327 |||||||||||||||||||| Sbjct: 21393 aaagctcaaaccaggaacca 21412
>gb|AC023503.23| Homo sapiens 3 BAC RP11-217I10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 160370 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 agaataaaaatgaaagaaaa 142 |||||||||||||||||||| Sbjct: 5794 agaataaaaatgaaagaaaa 5813
>ref|NM_023907.2| Mus musculus forkhead box I1 (Foxi1), mRNA Length = 2357 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 aaagctcaaaccaggaacca 327 |||||||||||||||||||| Sbjct: 1482 aaagctcaaaccaggaacca 1463
>gb|AC074312.64| Mus musculus strain C57BL/6J clone rp23-311c19 map 7, complete sequence Length = 220077 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 117 aatacaagaataaaaatgaaagaaaaag 144 |||| |||| |||||||||||||||||| Sbjct: 173359 aataaaagactaaaaatgaaagaaaaag 173386
>gb|AC117535.2| Homo sapiens chromosome 5 clone RP11-937M12, complete sequence Length = 176581 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 124 gaataaaaatgaaagaaaaagtga 147 ||||||||||||||| |||||||| Sbjct: 38369 gaataaaaatgaaagtaaaagtga 38346
>gb|AY065660.1| Bos taurus alpha1,3-galactosyltransferase gene, exons 5, 6, and 7 and partial cds Length = 2386 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 aatacaagaataaaaatgaa 136 |||||||||||||||||||| Sbjct: 779 aatacaagaataaaaatgaa 760
>gb|AC112217.2| Homo sapiens chromosome 3 clone CTD-2028L5, complete sequence Length = 156545 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 aatgaaagaaaaagtgagca 150 |||||||||||||||||||| Sbjct: 7466 aatgaaagaaaaagtgagca 7485
>gb|AC099054.2| Homo sapiens chromosome 3 clone RP11-489C3, complete sequence Length = 201564 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 aatgaaagaaaaagtgagca 150 |||||||||||||||||||| Sbjct: 54239 aatgaaagaaaaagtgagca 54220
>gb|AC003096.3| Arabidopsis thaliana chromosome 2 clone T29F13 map ve016, complete sequence Length = 69817 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 atctccaacccccttgagaa 38 |||||||||||||||||||| Sbjct: 48873 atctccaacccccttgagaa 48854
>gb|AC113401.2| Homo sapiens chromosome 5 clone RP11-454E20, complete sequence Length = 130491 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 124 gaataaaaatgaaagaaaaagtga 147 ||||||||||||||| |||||||| Sbjct: 118841 gaataaaaatgaaagtaaaagtga 118818
>gb|AC087377.7| Homo sapiens chromosome 11, clone RP11-292L2, complete sequence Length = 190650 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 aaaaatgaaagaaaaagtga 147 |||||||||||||||||||| Sbjct: 141774 aaaaatgaaagaaaaagtga 141793
>gb|AC091644.7| Homo sapiens chromosome 11, clone RP11-808H14, complete sequence Length = 183187 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 aaaaatgaaagaaaaagtga 147 |||||||||||||||||||| Sbjct: 136728 aaaaatgaaagaaaaagtga 136747
>gb|AC009560.10| Homo sapiens chromosome 15, clone RP11-219B17, complete sequence Length = 177308 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 128 aaaaatgaaagaaaaagtgagcag 151 ||||| |||||||||||||||||| Sbjct: 139940 aaaaaagaaagaaaaagtgagcag 139963
>emb|BX119984.15| Zebrafish DNA sequence from clone DKEY-257N17 in linkage group 1, complete sequence Length = 163978 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 gaataaaaatgaaagaaaaa 143 |||||||||||||||||||| Sbjct: 155577 gaataaaaatgaaagaaaaa 155596
>emb|BX511003.9| Zebrafish DNA sequence from clone CH211-69F16 in linkage group 1, complete sequence Length = 151271 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 gaataaaaatgaaagaaaaa 143 |||||||||||||||||||| Sbjct: 17862 gaataaaaatgaaagaaaaa 17881
>dbj|AK019994.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830401E05 product:forkhead homolog 10 (Drosophila), full insert sequence Length = 2357 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 aaagctcaaaccaggaacca 327 |||||||||||||||||||| Sbjct: 1482 aaagctcaaaccaggaacca 1463
>gb|AC022479.3|AC022479 Homo sapiens BAC clone RP11-217F11 from 3, complete sequence Length = 156535 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 caagaataaaaatgaaagaa 140 |||||||||||||||||||| Sbjct: 52143 caagaataaaaatgaaagaa 52162
>gb|AC079839.5| Homo sapiens BAC clone RP11-1152J17 from 2, complete sequence Length = 70310 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 gaataaaaatgaaagaaaaa 143 |||||||||||||||||||| Sbjct: 51302 gaataaaaatgaaagaaaaa 51283
>gb|AF257737.1|AF257737 Homo sapiens ciliary dynein heavy chain 9 (DNAH9) mRNA, complete cds Length = 13537 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 aaagtgagcagagagaaagc 160 |||||||||||||||||||| Sbjct: 9407 aaagtgagcagagagaaagc 9426
>gb|AC093784.3| Homo sapiens BAC clone RP11-211K17 from 2, complete sequence Length = 165500 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 aaagaaaaagtgagcagaga 154 |||||||||||||||||||| Sbjct: 118014 aaagaaaaagtgagcagaga 118033
>gb|AC092988.6| Homo sapiens 3 BAC RP11-217F11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 156528 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 caagaataaaaatgaaagaa 140 |||||||||||||||||||| Sbjct: 52142 caagaataaaaatgaaagaa 52161
>ref|XM_213354.3| PREDICTED: Rattus norvegicus dynein, axonemal, heavy polypeptide 9 (Dnah9), mRNA Length = 8025 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 aaagtgagcagagagaaagc 160 |||||||||||||||||||| Sbjct: 3775 aaagtgagcagagagaaagc 3794
>gb|AC109182.14| Mus musculus chromosome 7, clone RP23-223O9, complete sequence Length = 191479 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 124 gaataaaaatgaaagaaaaagtga 147 ||||||||||| |||||||||||| Sbjct: 113669 gaataaaaatgcaagaaaaagtga 113646
>dbj|AB002355.2| Homo sapiens mRNA for KIAA0357 gene, partial cds Length = 9198 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 aaagtgagcagagagaaagc 160 |||||||||||||||||||| Sbjct: 5095 aaagtgagcagagagaaagc 5114
>emb|CT030199.5| Zebrafish DNA sequence from clone CH73-388B4 in linkage group 19, complete sequence Length = 24144 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 119 tacaagaataaaaatgaaagaaaaagtg 146 ||||| ||||||||||||||||| |||| Sbjct: 1242 tacaaaaataaaaatgaaagaaacagtg 1215
>emb|CT030184.14| Mouse DNA sequence from clone RP23-9C19 on chromosome 13, complete sequence Length = 201341 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 aaaagtgagcagagagaaag 159 |||||||||||||||||||| Sbjct: 17838 aaaagtgagcagagagaaag 17819
>emb|AL772314.9| Zebrafish DNA sequence from clone DKEY-89B17 in linkage group 19, complete sequence Length = 185640 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 119 tacaagaataaaaatgaaagaaaaagtg 146 ||||| ||||||||||||||||| |||| Sbjct: 184882 tacaaaaataaaaatgaaagaaacagtg 184855
>gb|AC167563.3| Mus musculus BAC clone RP24-392I11 from chromosome 16, complete sequence Length = 201682 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 acaagaataaaaatgaaaga 139 |||||||||||||||||||| Sbjct: 108610 acaagaataaaaatgaaaga 108629
>gb|AC005209.1|AC005209 Homo sapiens chromosome 17, clone hRPK.628_O_18, complete sequence Length = 184130 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 aaagtgagcagagagaaagc 160 |||||||||||||||||||| Sbjct: 58519 aaagtgagcagagagaaagc 58538
>emb|CT030140.12| Mouse DNA sequence from clone RP24-345D17 on chromosome 12, complete sequence Length = 198163 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 aataaaaatgaaagaaaaag 144 |||||||||||||||||||| Sbjct: 12814 aataaaaatgaaagaaaaag 12795
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 catgtgttctcctcctcttc 260 |||||||||||||||||||| Sbjct: 1709683 catgtgttctcctcctcttc 1709664
>gb|AC161882.5| Mus musculus BAC clone RP23-134E24 from chromosome 16, complete sequence Length = 206219 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 caagaataaaaatgaaagaa 140 |||||||||||||||||||| Sbjct: 138595 caagaataaaaatgaaagaa 138614
>gb|AC149312.2| Phakopsora pachyrhizi clone JGIAFNA-101K10, complete sequence Length = 35053 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 tgaatacaagaataaaaatg 134 |||||||||||||||||||| Sbjct: 16081 tgaatacaagaataaaaatg 16100
>dbj|AP004981.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT13N17, TM0436b, complete sequence Length = 43428 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 acaagaataaaaatgaaaga 139 |||||||||||||||||||| Sbjct: 971 acaagaataaaaatgaaaga 990
>emb|AL731699.11| Mouse DNA sequence from clone RP23-336F11 on chromosome 2, complete sequence Length = 212836 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 aaaaatgaaagaaaaagtga 147 |||||||||||||||||||| Sbjct: 120324 aaaaatgaaagaaaaagtga 120305
>emb|AL662932.10| Mouse DNA sequence from clone RP23-15B7 on chromosome X, complete sequence Length = 218740 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 gaataaaaatgaaagaaaaa 143 |||||||||||||||||||| Sbjct: 168061 gaataaaaatgaaagaaaaa 168042
>emb|AL845298.5| Mouse DNA sequence from clone RP23-280N11 on chromosome 2, complete sequence Length = 213826 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 120 acaagaataaaaatgaaagaaaaa 143 ||||||||||||||||||| |||| Sbjct: 205578 acaagaataaaaatgaaaggaaaa 205555
>gb|AY863211.1| Mortierella verticillata mitochondrion, complete genome Length = 58745 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 aatacaagaataaaaatgaaagaa 140 ||||| |||||||||||||||||| Sbjct: 18701 aatactagaataaaaatgaaagaa 18724
>emb|AJ404468.1|HSA404468 Homo sapiens mRNA for dynein heavy chain 9 (DNAH9 gene) Length = 13816 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 aaagtgagcagagagaaagc 160 |||||||||||||||||||| Sbjct: 9417 aaagtgagcagagagaaagc 9436 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,828,060 Number of Sequences: 3902068 Number of extensions: 5828060 Number of successful extensions: 144516 Number of sequences better than 10.0: 96 Number of HSP's better than 10.0 without gapping: 96 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 144262 Number of HSP's gapped (non-prelim): 254 length of query: 447 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 425 effective length of database: 17,147,199,772 effective search space: 7287559903100 effective search space used: 7287559903100 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
