| Clone Name | rbaet90b08 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | LAMA_DROME (Q00174) Laminin alpha chain precursor | 31 | 0.77 | 2 | HYFC_ECOLI (P77858) Hydrogenase-4 component C (EC 1.-.-.-) | 29 | 3.8 |
|---|
>LAMA_DROME (Q00174) Laminin alpha chain precursor| Length = 3712 Score = 31.2 bits (69), Expect = 0.77 Identities = 21/52 (40%), Positives = 27/52 (51%) Frame = +3 Query: 24 YYSTGSVLLNKPHTHAL*LPKSKPY*SIKQA*DPCTKPTTYNTTVSTAASTT 179 YY +G + P ++A LP KP I+ P T PTT TT +T STT Sbjct: 3238 YYPSGDNEVESPWSNADTLPPLKP--DIESTLPPTT-PTTTTTTTTTTTSTT 3286
>HYFC_ECOLI (P77858) Hydrogenase-4 component C (EC 1.-.-.-)| Length = 315 Score = 28.9 bits (63), Expect = 3.8 Identities = 16/26 (61%), Positives = 18/26 (69%) Frame = +2 Query: 26 LFNWFGLAQQTTHACSLTSKVQTLLK 103 LF FG AQ+ + AC LTS V TLLK Sbjct: 245 LFLPFGRAQELSLACLLTSLVVTLLK 270 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 25,515,297 Number of Sequences: 219361 Number of extensions: 341754 Number of successful extensions: 875 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 853 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 874 length of database: 80,573,946 effective HSP length: 45 effective length of database: 70,702,701 effective search space used: 1696864824 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)