| Clone Name | rbaet79h11 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X15869.1|HVNADPHP Barley mRNA for NADPH-protochlorophyllide oxidoreductase (PCR) Length = 1490 Score = 264 bits (133), Expect = 6e-68 Identities = 133/133 (100%) Strand = Plus / Minus Query: 1 catcctcaatcaggcctgcggttttattattccaatgtttgccgaaaattgtacatcttc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1488 catcctcaatcaggcctgcggttttattattccaatgtttgccgaaaattgtacatcttc 1429 Query: 61 cacacgagatctatgcactctcgcggccactcgcaaggcctctcctgcgtaattgagctt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1428 cacacgagatctatgcactctcgcggccactcgcaaggcctctcctgcgtaattgagctt 1369 Query: 121 ctaaaaaggcgta 133 ||||||||||||| Sbjct: 1368 ctaaaaaggcgta 1356
>emb|X76532.1|TAPWR5PI Triticum aestivium pWR5 RNA for protochlorophyilide reductase Length = 1484 Score = 176 bits (89), Expect = 1e-41 Identities = 123/133 (92%), Gaps = 1/133 (0%) Strand = Plus / Minus Query: 1 catcctcaatcaggcctgcggttttattattccaatgtttgccgaaaattgtacatcttc 60 ||||||||||||| |||||||||||||||||| | ||| |||||||||||||||||||| Sbjct: 1472 catcctcaatcagacctgcggttttattattc-atggttcgccgaaaattgtacatcttc 1414 Query: 61 cacacgagatctatgcactctcgcggccactcgcaaggcctctcctgcgtaattgagctt 120 ||||||||||||| |||||||||| | |||||||||||||||||| ||||||||||| || Sbjct: 1413 cacacgagatctacgcactctcgccgacactcgcaaggcctctcccgcgtaattgagttt 1354 Query: 121 ctaaaaaggcgta 133 ||||||||||||| Sbjct: 1353 ctaaaaaggcgta 1341
>emb|X17067.1|ASPCR Avena sativa mRNA for protochlorophyllide reductase Length = 1146 Score = 131 bits (66), Expect = 6e-28 Identities = 98/106 (92%), Gaps = 2/106 (1%) Strand = Plus / Minus Query: 1 catcctcaatcaggcctgcggttttattattccaatgttt-gccgaaaattgtacatctt 59 |||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 1146 catcctcaattaggcctgcggttttattattccaatggttcgccgaaaattgtacatctt 1087 Query: 60 ccacacgagatctatgcactctcgcggccactcgc-aaggcctctc 104 |||| ||||||||||| |||| ||||| ||||||| |||||||||| Sbjct: 1086 ccacccgagatctatgtactcccgcggacactcgcaaaggcctctc 1041
>gb|AC124417.5| Mus musculus BAC clone RP24-313G11 from chromosome 18, complete sequence Length = 181811 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 aaattgtacatcttccacac 65 |||||||||||||||||||| Sbjct: 24311 aaattgtacatcttccacac 24292
>emb|AL928676.13| Zebrafish DNA sequence from clone DKEY-121K17, complete sequence Length = 176196 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ttttattattccaatgtttg 41 |||||||||||||||||||| Sbjct: 105180 ttttattattccaatgtttg 105199
>ref|XM_968605.1| PREDICTED: Tribolium castaneum similar to Cytochrome P450 4c3 (CYPIVC3) (LOC662514), mRNA Length = 1488 Score = 38.2 bits (19), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 27 ttattccaatgtttgccgaaaat 49 ||||||| ||||||||||||||| Sbjct: 476 ttattcccatgtttgccgaaaat 454
>emb|BX248104.5| Zebrafish DNA sequence from clone DKEY-77P13 in linkage group 20, complete sequence Length = 139851 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 ttttattattccaatgttt 40 ||||||||||||||||||| Sbjct: 92684 ttttattattccaatgttt 92702 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 866,320 Number of Sequences: 3902068 Number of extensions: 866320 Number of successful extensions: 56716 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 56706 Number of HSP's gapped (non-prelim): 8 length of query: 133 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 112 effective length of database: 17,151,101,840 effective search space: 1920923406080 effective search space used: 1920923406080 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)