>ref|NM_125995.1| Arabidopsis thaliana auxin:hydrogen symporter AT5G65980 mRNA,
            complete cds
          Length = 1188

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 125/156 (80%)
 Strand = Plus / Minus

                                                                        
Query: 142  gaggatggacatgaagacggtggaccaggcggtgagggcgagggcagcgacgaggtaggt 201
            ||||||||| | ||||| ||| |||||| |||||||||| |  |  || || ||||||||
Sbjct: 1182 gaggatggagaggaagatggttgaccagacggtgagggctaaagatgcaaccaggtaggt 1123

                                                                        
Query: 202  ccagaggaagatgaccgagcactcctcctgtgcgacgtcgtagagctgtgccatggtgcc 261
            ||| | |||||||||||||||||| || || || |||||| | || |||||||| |||| 
Sbjct: 1122 ccacaagaagatgaccgagcactcatcttgagccacgtcgaacagttgtgccattgtgct 1063

                                                
Query: 262  gatgctcatcgcgggcggcagcgcgaactggagcat 297
             ||  |||| || ||||| || |||||||| |||||
Sbjct: 1062 aatattcatggcaggcggtagtgcgaactgaagcat 1027

>dbj|AB011474.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K2A18
          Length = 79899

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 98/120 (81%)
 Strand = Plus / Minus

                                                                         
Query: 142   gaggatggacatgaagacggtggaccaggcggtgagggcgagggcagcgacgaggtaggt 201
             ||||||||| | ||||| ||| |||||| |||||||||| |  |  || || ||||||||
Sbjct: 10706 gaggatggagaggaagatggttgaccagacggtgagggctaaagatgcaaccaggtaggt 10647

                                                                         
Query: 202   ccagaggaagatgaccgagcactcctcctgtgcgacgtcgtagagctgtgccatggtgcc 261
             ||| | |||||||||||||||||| || || || |||||| | || |||||||| |||||
Sbjct: 10646 ccacaagaagatgaccgagcactcatcttgagccacgtcgaacagttgtgccattgtgcc 10587

>dbj|AK070682.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062B02, full
            insert sequence
          Length = 1913

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                        
Query: 245  agctgtgccatggtgccgatgctcatcgcgggcggcagcgcgaactggagcatcagcacg 304
            ||||| |||||||| |||||| |||| || || |||||||||||||| | ||||||||||
Sbjct: 1259 agctgagccatggttccgatgttcattgcaggtggcagcgcgaactgcatcatcagcacg 1200

>gb|AC021878.4| Homo sapiens BAC clone RP11-18N21 from 4, complete sequence
          Length = 161391

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 37    atatatactaatagcaatcaat 58
             ||||||||||||||||||||||
Sbjct: 72783 atatatactaatagcaatcaat 72762

>gb|AC137593.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone
             OSJNBa0043I04, complete sequence
          Length = 145191

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                          
Query: 260   ccgatgctcatcgcgggcggcagcgcgaactggagcatcagcacg 304
             |||||| |||| || || |||||||||||||| | ||||||||||
Sbjct: 12057 ccgatgttcattgcaggtggcagcgcgaactgcatcatcagcacg 12013

>gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0031H05,
              complete sequence
          Length = 141200

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                           
Query: 260    ccgatgctcatcgcgggcggcagcgcgaactggagcatcagcacg 304
              |||||| |||| || || |||||||||||||| | ||||||||||
Sbjct: 122663 ccgatgttcattgcaggtggcagcgcgaactgcatcatcagcacg 122619

>gb|AC145990.3| Pan troglodytes BAC clone RP43-168N19 from 7, complete sequence
          Length = 144496

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 20   ataaatactagttgtacatat 40
            |||||||||||||||||||||
Sbjct: 1080 ataaatactagttgtacatat 1100

>gb|BT009439.1| Triticum aestivum clone wlmk4.pk0018.f9:fis, full insert mRNA
           sequence
          Length = 1246

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 151 catgaagacggtggaccaggcggtg 175
           ||||||||||||||||||| |||||
Sbjct: 447 catgaagacggtggaccagacggtg 423

>emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete genome; segment 2/29
          Length = 291000

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 171    cggtgagggcgagggcagcgacgag 195
              |||||||||||||||| ||||||||
Sbjct: 236614 cggtgagggcgagggcggcgacgag 236638

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                             
Query: 260      ccgatgctcatcgcgggcggcagcgcgaactggagcatcagcacg 304
                |||||| |||| || || |||||||||||||| | ||||||||||
Sbjct: 21666037 ccgatgttcattgcaggtggcagcgcgaactgcatcatcagcacg 21665993

>gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence
          Length = 1207381

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 253    catggtgccgatgctcatcg 272
              ||||||||||||||||||||
Sbjct: 422922 catggtgccgatgctcatcg 422941

>gb|AC139369.9| Mus musculus chromosome 1, clone RP24-567B20, complete sequence
          Length = 159817

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 94     caagcctatactttcttata 113
              ||||||||||||||||||||
Sbjct: 100295 caagcctatactttcttata 100314

>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome
          Length = 2560265

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 250     tgccatggtgccgatgctcatcgc 273
               |||||||||||| |||||||||||
Sbjct: 1253537 tgccatggtgcccatgctcatcgc 1253560

>gb|AC161368.2| Mus musculus BAC clone RP23-460M18 from chromosome 6, complete sequence
          Length = 171306

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 52     aatcaatagaaattgatgaa 71
              ||||||||||||||||||||
Sbjct: 142906 aatcaatagaaattgatgaa 142887

>gb|AC132467.3| Mus musculus BAC clone RP23-71E21 from chromosome 14, complete sequence
          Length = 191280

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 203    cagaggaagatgaccgagca 222
              ||||||||||||||||||||
Sbjct: 157191 cagaggaagatgaccgagca 157172

>emb|Z78013.2|CEF15B9 Caenorhabditis elegans Cosmid F15B9, complete sequence
          Length = 32248

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 152   atgaagacggtggaccaggcggtg 175
             |||||||||||||||| |||||||
Sbjct: 16523 atgaagacggtggacctggcggtg 16500

>gb|AC129313.4| Mus musculus BAC clone RP23-342K4 from chromosome 8, complete sequence
          Length = 215576

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 193    gaggtaggtccagaggaaga 212
              ||||||||||||||||||||
Sbjct: 207766 gaggtaggtccagaggaaga 207785

>gb|AC116156.3| Homo sapiens chromosome 11, clone RP11-44D14, complete sequence
          Length = 176597

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 24    atactagttgtacatatata 43
             ||||||||||||||||||||
Sbjct: 46092 atactagttgtacatatata 46111

>gb|AC017063.8| Homo sapiens BAC clone RP11-354H17 from 4, complete sequence
          Length = 193092

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    atcaatagaaattgatgaag 72
             ||||||||||||||||||||
Sbjct: 43598 atcaatagaaattgatgaag 43579

>gb|AF076290.2|AF076290 Brucella melitensis Bme18 (bme18) gene, partial cds; Bme19 (bme19),
            Bme16 (bme16), Bme17 (bme17), Bme20 (bme20), Bme21
            (bme21), Bme22 (bme22), Bme23 (bme23), Bme24 (bme24),
            Bme25 (bme25), Bme26 (bme26), Bme27 (bme27), Bme28
            (bme28), Bme29 (bme29), Bme30 (bme30), Bme31 (bme31),
            Bme1 (bme1), Bme2 (bme2), Bme3 (bme3), Bme4 (bme4), outer
            membrane protein (omp31), Bme6 (bme6), Bme7 (bme7), Bme8
            (bme8), Bme9 (bme9), Bme10 (bme10), Bme11 (bme11), Bme12
            (bme12), Bme13 (bme13), and Bme14 (bme14) genes, complete
            cds; and Bme15 (bme15) gene, partial cds
          Length = 36502

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 253  catggtgccgatgctcatcg 272
            ||||||||||||||||||||
Sbjct: 9617 catggtgccgatgctcatcg 9598

>ref|NM_073852.3| Caenorhabditis elegans F15B9.4 (F15B9.4) mRNA, complete cds
          Length = 3769

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 152  atgaagacggtggaccaggcggtg 175
            |||||||||||||||| |||||||
Sbjct: 1435 atgaagacggtggacctggcggtg 1412

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 173     gtgagggcgagggcagcgac 192
               ||||||||||||||||||||
Sbjct: 9920689 gtgagggcgagggcagcgac 9920708

>gb|AC008313.3|AC008313 Drosophila melanogaster, chromosome 3R, region 84D-84E, BAC clone
             BACR11D12, complete sequence
          Length = 189596

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 99    ctatactttcttatatacta 118
             ||||||||||||||||||||
Sbjct: 91654 ctatactttcttatatacta 91635

>gb|AE009716.1| Brucella melitensis 16M chromosome II, section 78 of 107 of the
             complete sequence
          Length = 11659

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 253   catggtgccgatgctcatcg 272
             ||||||||||||||||||||
Sbjct: 11522 catggtgccgatgctcatcg 11503

>gb|AC066688.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-438J16, complete
              sequence
          Length = 176367

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 52     aatcaatagaaattgatgaa 71
              ||||||||||||||||||||
Sbjct: 136921 aatcaatagaaattgatgaa 136940

>dbj|AP005007.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0521F09
          Length = 164823

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 173    gtgagggcgagggcagcgac 192
              ||||||||||||||||||||
Sbjct: 101651 gtgagggcgagggcagcgac 101670

>gb|AC138285.8| Mus musculus chromosome 1, clone RP24-383G22, complete sequence
          Length = 216104

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 94     caagcctatactttcttata 113
              ||||||||||||||||||||
Sbjct: 212529 caagcctatactttcttata 212548

>gb|AE003676.4| Drosophila melanogaster chromosome 3R, section 14 of 118 of the complete
              sequence
          Length = 267607

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 99     ctatactttcttatatacta 118
              ||||||||||||||||||||
Sbjct: 168193 ctatactttcttatatacta 168174

>gb|AC131574.4| Homo sapiens chromosome 11, clone RP11-957H15, complete sequence
          Length = 166214

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 24    atactagttgtacatatata 43
             ||||||||||||||||||||
Sbjct: 61298 atactagttgtacatatata 61317


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,562,091
Number of Sequences: 3902068
Number of extensions: 2562091
Number of successful extensions: 51282
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51171
Number of HSP's gapped (non-prelim): 111
length of query: 304
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 282
effective length of database: 17,147,199,772
effective search space: 4835510335704
effective search space used: 4835510335704
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)