| Clone Name | rbaet79f03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC158340.9| Mus musculus chromosome 1, clone RP24-161N8, complete sequence Length = 163123 Score = 40.1 bits (20), Expect = 2.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 aagaaaactatagaactaaa 106 |||||||||||||||||||| Sbjct: 77376 aagaaaactatagaactaaa 77357
>gb|AC102781.5| Mus musculus chromosome 1, clone RP23-271G2, complete sequence Length = 198393 Score = 40.1 bits (20), Expect = 2.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 aagaaaactatagaactaaa 106 |||||||||||||||||||| Sbjct: 172173 aagaaaactatagaactaaa 172192
>gb|BC082919.1| Xenopus laevis similar to nucleobindin 1, mRNA (cDNA clone MGC:85482 IMAGE:6938506), complete cds Length = 1719 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 142 actccatctccatttgtat 160 ||||||||||||||||||| Sbjct: 843 actccatctccatttgtat 825
>gb|AC150593.2| Bos taurus BAC CH240-105D16 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 151783 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 124 acacagtatcactaattta 142 ||||||||||||||||||| Sbjct: 51769 acacagtatcactaattta 51751
>gb|AY679523.1| Homo sapiens cell division cycle 2-like 5 (cholinesterase-related cell division controller) (CDC2L5) gene, complete cds Length = 148952 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 131 atcactaatttactccatc 149 ||||||||||||||||||| Sbjct: 45954 atcactaatttactccatc 45936
>gb|AC072061.8| Homo sapiens BAC clone RP11-467D6 from 7, complete sequence Length = 167852 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 131 atcactaatttactccatc 149 ||||||||||||||||||| Sbjct: 128148 atcactaatttactccatc 128130
>gb|AC127252.3| Mus musculus BAC clone RP24-276A6 from chromosome 3, complete sequence Length = 173199 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 tagtcatggctggcccgaa 88 ||||||||||||||||||| Sbjct: 167578 tagtcatggctggcccgaa 167596
>gb|AC124202.3| Mus musculus BAC clone RP23-337F21 from chromosome 14, complete sequence Length = 189556 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 acaaacacctctcttcaag 19 ||||||||||||||||||| Sbjct: 137312 acaaacacctctcttcaag 137294
>emb|AL391384.18| Human DNA sequence from clone RP11-555G22 on chromosome 13 Contains the 5' end of the gene for mitotic control protein (DIS3,KIAA1008), the 5' end of the gene for progesterone-induced blocking factor 1 (PIBF1) and a CpG island, complete sequence Length = 155270 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 85 cgaagaaaactatagaact 103 ||||||||||||||||||| Sbjct: 114522 cgaagaaaactatagaact 114540
>gb|AC158747.3| Mus musculus chromosome 15, clone RP24-248P22, complete sequence Length = 156293 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 136 taatttactccatctccat 154 ||||||||||||||||||| Sbjct: 91171 taatttactccatctccat 91189
>gb|AC092656.1| Homo sapiens BAC clone RP11-455G16 from 4, complete sequence Length = 191840 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 125 cacagtatcactaatttac 143 ||||||||||||||||||| Sbjct: 18029 cacagtatcactaatttac 18047
>gb|AC011853.7| Homo sapiens chromosome 8, clone RP11-403D15, complete sequence Length = 171541 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 142 actccatctccatttgtat 160 ||||||||||||||||||| Sbjct: 139635 actccatctccatttgtat 139617
>gb|AC158989.1| Mus musculus BAC clone RP23-399H20 from chromosome 3, complete sequence Length = 190372 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 70 tagtcatggctggcccgaa 88 ||||||||||||||||||| Sbjct: 135919 tagtcatggctggcccgaa 135901
>gb|AC105969.17| Mus musculus chromosome 15, clone RP23-477B23, complete sequence Length = 189238 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 136 taatttactccatctccat 154 ||||||||||||||||||| Sbjct: 40096 taatttactccatctccat 40078
>gb|AC150033.2| Mus musculus BAC clone RP23-449N19 from 3, complete sequence Length = 179293 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 tagtcatggctggcccgaa 88 ||||||||||||||||||| Sbjct: 63200 tagtcatggctggcccgaa 63218
>emb|AL596456.15| Mouse DNA sequence from clone RP23-353K20 on chromosome 11, complete sequence Length = 228428 Score = 38.2 bits (19), Expect = 7.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 3 aaacacctctcttcaagttgctc 25 ||||||||| ||||||||||||| Sbjct: 177089 aaacacctcccttcaagttgctc 177111
>gb|AY500153.1| Mycobacteriophage Bethlehem, complete genome Length = 52250 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 tggctggcccgaagaaaac 94 ||||||||||||||||||| Sbjct: 32779 tggctggcccgaagaaaac 32761
>gb|AY500152.1| Mycobacteriophage U2, complete genome Length = 51277 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 tggctggcccgaagaaaac 94 ||||||||||||||||||| Sbjct: 32124 tggctggcccgaagaaaac 32106
>emb|AL606988.16| Mouse DNA sequence from clone RP23-35A4 on chromosome 4, complete sequence Length = 160100 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 90 aaaactatagaactaaagt 108 ||||||||||||||||||| Sbjct: 138505 aaaactatagaactaaagt 138487 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,090,415 Number of Sequences: 3902068 Number of extensions: 1090415 Number of successful extensions: 70311 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 70275 Number of HSP's gapped (non-prelim): 36 length of query: 164 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 142 effective length of database: 17,147,199,772 effective search space: 2434902367624 effective search space used: 2434902367624 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)