ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet79e10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY039003.1| Hordeum vulgare subsp. vulgare Mg-chelatase subun... 159 1e-36
2gb|U26916.1|HVU26916 Hordeum vulgare protoporphyrin IX Mg-chelat... 159 1e-36
3gb|BT009033.1| Triticum aestivum clone wdk4c.pk005.f24:fis, full... 107 4e-21
4gb|AC117187.3| Mus musculus BAC clone RP23-41M4 from 1, complete... 42 0.21
5gb|AC123556.4| Mus musculus BAC clone RP23-176M9 from 1, complet... 42 0.21
6gb|AC103941.12| Mus musculus chromosome 9, clone RP23-430I4, com... 40 0.84
7gb|AC091276.7| Mus musculus chromosome 15, clone RP23-167B4, com... 40 0.84
8emb|CT025685.5| Mouse DNA sequence from clone RP24-116B6 on chro... 40 0.84
9gb|AC124182.4| Mus musculus BAC clone RP23-207J3 from chromosome... 40 0.84
10emb|AL732591.4| Human DNA sequence from clone RP11-566B18 on chr... 40 0.84
11gb|AE014839.1| Plasmodium falciparum 3D7 chromosome 11 section 4... 40 0.84
12emb|AL022577.1|HS353H6 Human DNA sequence from clone RP3-353H6 o... 40 0.84
13emb|CR753840.11| Zebrafish DNA sequence from clone DKEY-208H10 i... 40 0.84
14emb|AL732599.5| Mouse DNA sequence from clone RP24-312B5 on chro... 40 0.84
15gb|AC073947.46| Mus musculus strain C57BL/6J chromosome 9 clone ... 40 0.84
16dbj|AK173865.1| Ciona intestinalis cDNA, clone:ciad063c13, full ... 40 0.84
17emb|AL357095.4|CNS05TDU Human chromosome 14 DNA sequence BAC R-4... 40 0.84
18emb|AL162811.6|CNS01RI1 Human chromosome 14 DNA sequence BAC R-1... 40 0.84
19gb|U46670.1| Caenorhabditis elegans cosmid R09G11, complete sequ... 38 3.3
20gb|AC152111.1| Pichia stipitis clone JGIAHYZ-17L1, complete sequ... 38 3.3
21gb|AC136786.4| Oryza sativa (japonica cultivar-group) chromosome... 38 3.3
22gb|AC124826.8| Mus musculus chromosome 12, clone RP23-455F18, co... 38 3.3
23gb|AC125174.3| Mus musculus BAC clone RP24-544G11 from chromosom... 38 3.3
24emb|AL390236.21| Human DNA sequence from clone RP11-380J17 on ch... 38 3.3
25emb|AL139228.1| Human DNA sequence from clone RP4-540A13 on chro... 38 3.3
26gb|AC091293.2| Takifugu rubripes clone 283N9, complete sequence 38 3.3
27emb|Z67753.1|OSCHLPLXX Odontella sinensis complete chloroplast g... 38 3.3
28emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; se... 38 3.3
29gb|AC010665.6| Drosophila melanogaster 3L BAC RP98-23H9 (Roswell... 38 3.3
30gb|AE009916.1|AE009916 Pyrobaculum aerophilum strain IM2 section... 38 3.3
31tpg|BK000081.1| TPA: TPA_exp: Oryza sativa cellulose synthase-li... 38 3.3
32ref|XM_625117.1| PREDICTED: Apis mellifera similar to integrin a... 38 3.3
33dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 38 3.3
34dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 38 3.3
35gb|AC018470.11| Homo sapiens BAC clone RP11-572N21 from 2, compl... 38 3.3
36gb|AC008113.4|AC008113 Genomic sequence for Arabidopsis thaliana... 38 3.3
37gb|AC117451.3| Homo sapiens 3 BAC RP11-331K15 (Roswell Park Canc... 38 3.3
38dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic D... 38 3.3
39emb|AL954704.10| Zebrafish DNA sequence from clone DKEY-110K21 i... 38 3.3
40gb|AC005873.3|AC005873 citb_15_o_21, complete sequence 38 3.3
41emb|BX569783.4| Zebrafish DNA sequence from clone CH211-245H14 i... 38 3.3
42gb|AE003482.4| Drosophila melanogaster chromosome 3L, section 16... 38 3.3
43gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 38 3.3
44emb|AL953839.10| Mouse DNA sequence from clone RP23-325L22 on ch... 38 3.3 
>gb|AY039003.1| Hordeum vulgare subsp. vulgare Mg-chelatase subunit XANTHA-F
            (Xantha-f) gene, complete cds
          Length = 6252

 Score =  159 bits (80), Expect = 1e-36
 Identities = 80/80 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    gttaaaggtctgtattgcatgttacaacttatataaattacaaattatacaagtttcaac 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6051 gttaaaggtctgtattgcatgttacaacttatataaattacaaattatacaagtttcaac 5992

                                
Query: 61   tcaacgaggcagaagaattc 80
            ||||||||||||||||||||
Sbjct: 5991 tcaacgaggcagaagaattc 5972
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>gb|U26916.1|HVU26916 Hordeum vulgare protoporphyrin IX Mg-chelatase subunit precursor
            (Xantha-f) gene, complete cds
          Length = 6364

 Score =  159 bits (80), Expect = 1e-36
 Identities = 80/80 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    gttaaaggtctgtattgcatgttacaacttatataaattacaaattatacaagtttcaac 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6065 gttaaaggtctgtattgcatgttacaacttatataaattacaaattatacaagtttcaac 6006

                                
Query: 61   tcaacgaggcagaagaattc 80
            ||||||||||||||||||||
Sbjct: 6005 tcaacgaggcagaagaattc 5986
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>gb|BT009033.1| Triticum aestivum clone wdk4c.pk005.f24:fis, full insert mRNA
            sequence
          Length = 3257

 Score =  107 bits (54), Expect = 4e-21
 Identities = 72/78 (92%)
 Strand = Plus / Minus

                                                                        
Query: 1    gttaaaggtctgtattgcatgttacaacttatataaattacaaattatacaagtttcaac 60
            ||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||| ||
Sbjct: 3223 gttaaaggtctgtatggcatgttacaacttttataaatcacaaattatacaagtttcgac 3164

                              
Query: 61   tcaacgaggcagaagaat 78
            ||| | ||||||||||||
Sbjct: 3163 tcagcaaggcagaagaat 3146
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>gb|AC117187.3| Mus musculus BAC clone RP23-41M4 from 1, complete sequence
          Length = 138404

 Score = 42.1 bits (21), Expect = 0.21
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 33   ataaattacaaattatacaag 53
            |||||||||||||||||||||
Sbjct: 4529 ataaattacaaattatacaag 4549
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>gb|AC123556.4| Mus musculus BAC clone RP23-176M9 from 1, complete sequence
          Length = 198900

 Score = 42.1 bits (21), Expect = 0.21
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 33     ataaattacaaattatacaag 53
              |||||||||||||||||||||
Sbjct: 159767 ataaattacaaattatacaag 159787
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>gb|AC103941.12| Mus musculus chromosome 9, clone RP23-430I4, complete sequence
          Length = 172217

 Score = 40.1 bits (20), Expect = 0.84
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                          
Query: 29     ttatataaatta-caaattatacaagtt 55
              |||||||||||| |||||||||||||||
Sbjct: 124375 ttatataaattaacaaattatacaagtt 124402
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>gb|AC091276.7| Mus musculus chromosome 15, clone RP23-167B4, complete sequence
          Length = 255663

 Score = 40.1 bits (20), Expect = 0.84
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 29   ttatataaattacaaattat 48
            ||||||||||||||||||||
Sbjct: 3809 ttatataaattacaaattat 3828
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>emb|CT025685.5| Mouse DNA sequence from clone RP24-116B6 on chromosome 9, complete
              sequence
          Length = 173933

 Score = 40.1 bits (20), Expect = 0.84
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                          
Query: 29     ttatataaatta-caaattatacaagtt 55
              |||||||||||| |||||||||||||||
Sbjct: 158658 ttatataaattaacaaattatacaagtt 158631
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>gb|AC124182.4| Mus musculus BAC clone RP23-207J3 from chromosome 15, complete sequence
          Length = 195532

 Score = 40.1 bits (20), Expect = 0.84
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    ttatataaattacaaattat 48
             ||||||||||||||||||||
Sbjct: 28925 ttatataaattacaaattat 28906
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>emb|AL732591.4| Human DNA sequence from clone RP11-566B18 on chromosome Xq24-25,
             complete sequence
          Length = 94595

 Score = 40.1 bits (20), Expect = 0.84
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    tatataaattacaaattata 49
             ||||||||||||||||||||
Sbjct: 64215 tatataaattacaaattata 64196
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>gb|AE014839.1| Plasmodium falciparum 3D7 chromosome 11 section 4 of 8 of the complete
              sequence
          Length = 250029

 Score = 40.1 bits (20), Expect = 0.84
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 30     tatataaattacaaattata 49
              ||||||||||||||||||||
Sbjct: 246980 tatataaattacaaattata 246961
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>emb|AL022577.1|HS353H6 Human DNA sequence from clone RP3-353H6 on chromosome Xq25-26.2
             Contains the 3' end of the SMARCA1 gene for SWI/SNF
             related, matrix associated, actin dependent regulator of
             chromatin (subfamily a, member 1) and aribosomal protein
             S26 (RPS26) pseudogene, complete sequence
          Length = 147394

 Score = 40.1 bits (20), Expect = 0.84
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    aaattacaaattatacaagt 54
             ||||||||||||||||||||
Sbjct: 50481 aaattacaaattatacaagt 50462
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>emb|CR753840.11| Zebrafish DNA sequence from clone DKEY-208H10 in linkage group 5,
             complete sequence
          Length = 121731

 Score = 40.1 bits (20), Expect = 0.84
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 29    ttatataaattacaaattatacaa 52
             ||||| ||||||||||||||||||
Sbjct: 65510 ttatacaaattacaaattatacaa 65487
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>emb|AL732599.5| Mouse DNA sequence from clone RP24-312B5 on chromosome 4 Contains the
             5' end of the Tnfsf8 gene for tumor necrosis factor
             (ligand) superfamily member 8 and a ribosomal protein L17
             (Rpl17) pseudogene, complete sequence
          Length = 95217

 Score = 40.1 bits (20), Expect = 0.84
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    ataaattacaaattatacaa 52
             ||||||||||||||||||||
Sbjct: 50724 ataaattacaaattatacaa 50705
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>gb|AC073947.46| Mus musculus strain C57BL/6J chromosome 9 clone rp23-80d20, complete
             sequence
          Length = 247089

 Score = 40.1 bits (20), Expect = 0.84
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                         
Query: 29    ttatataaatta-caaattatacaagtt 55
             |||||||||||| |||||||||||||||
Sbjct: 15786 ttatataaattaacaaattatacaagtt 15759
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>dbj|AK173865.1| Ciona intestinalis cDNA, clone:ciad063c13, full insert sequence
          Length = 285

 Score = 40.1 bits (20), Expect = 0.84
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 31  atataaattacaaattatacaagtttca 58
           |||||||||| |||| ||||||||||||
Sbjct: 245 atataaattataaatgatacaagtttca 272
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>emb|AL357095.4|CNS05TDU Human chromosome 14 DNA sequence BAC R-48D2 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 181805

 Score = 40.1 bits (20), Expect = 0.84
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 13     tattgcatgttacaacttatataaatta 40
              ||||||||| | ||||||||||||||||
Sbjct: 176724 tattgcatgcttcaacttatataaatta 176751
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>emb|AL162811.6|CNS01RI1 Human chromosome 14 DNA sequence BAC R-101G3 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 161204

 Score = 40.1 bits (20), Expect = 0.84
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 13    tattgcatgttacaacttatataaatta 40
             ||||||||| | ||||||||||||||||
Sbjct: 20280 tattgcatgcttcaacttatataaatta 20307
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>gb|U46670.1| Caenorhabditis elegans cosmid R09G11, complete sequence
          Length = 34133

 Score = 38.2 bits (19), Expect = 3.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 27    acttatataaattacaaattata 49
             |||||| ||||||||||||||||
Sbjct: 12468 acttatttaaattacaaattata 12490
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>gb|AC152111.1| Pichia stipitis clone JGIAHYZ-17L1, complete sequence
          Length = 38449

 Score = 38.2 bits (19), Expect = 3.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 37   attacaaattatacaagtt 55
            |||||||||||||||||||
Sbjct: 5736 attacaaattatacaagtt 5754
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>gb|AC136786.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0027P09, complete sequence
          Length = 171861

 Score = 38.2 bits (19), Expect = 3.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 30    tatataaattacaaattat 48
             |||||||||||||||||||
Sbjct: 92470 tatataaattacaaattat 92452
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>gb|AC124826.8| Mus musculus chromosome 12, clone RP23-455F18, complete sequence
          Length = 177979

 Score = 38.2 bits (19), Expect = 3.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 31     atataaattacaaattata 49
              |||||||||||||||||||
Sbjct: 126957 atataaattacaaattata 126975
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>gb|AC125174.3| Mus musculus BAC clone RP24-544G11 from chromosome 16, complete sequence
          Length = 196646

 Score = 38.2 bits (19), Expect = 3.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 31     atataaattacaaattata 49
              |||||||||||||||||||
Sbjct: 151251 atataaattacaaattata 151233
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>emb|AL390236.21| Human DNA sequence from clone RP11-380J17 on chromosome 10 Contains the
             3' end of the PTPRE gene for protein tyrosine phosphatase
             receptor type E and the 3' end of the MKI67 gene for
             antigen identified by monoclonal antibody Ki-67, complete
             sequence
          Length = 123057

 Score = 38.2 bits (19), Expect = 3.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 32    tataaattacaaattatac 50
             |||||||||||||||||||
Sbjct: 47704 tataaattacaaattatac 47686
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>emb|AL139228.1| Human DNA sequence from clone RP4-540A13 on chromosome Xq22.1-22.3
             Contains the RAB9B gene for RAB9B member RAS oncogene
             family, complete sequence
          Length = 31483

 Score = 38.2 bits (19), Expect = 3.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 29    ttatataaattacaaatta 47
             |||||||||||||||||||
Sbjct: 14969 ttatataaattacaaatta 14951
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>gb|AC091293.2| Takifugu rubripes clone 283N9, complete sequence
          Length = 147908

 Score = 38.2 bits (19), Expect = 3.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 30    tatataaattacaaattatacaa 52
             |||||||||||||| ||||||||
Sbjct: 59750 tatataaattacaatttatacaa 59772
to top
>emb|Z67753.1|OSCHLPLXX Odontella sinensis complete chloroplast genome
          Length = 119704

 Score = 38.2 bits (19), Expect = 3.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 26    aacttatataaattacaaattatacaa 52
             ||||||| |||||| ||||||||||||
Sbjct: 90582 aacttatttaaatttcaaattatacaa 90608
to top
>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5
          Length = 349742

 Score = 38.2 bits (19), Expect = 3.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 26    aacttatataaattacaaa 44
             |||||||||||||||||||
Sbjct: 48922 aacttatataaattacaaa 48904
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>gb|AC010665.6| Drosophila melanogaster 3L BAC RP98-23H9 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 156526

 Score = 38.2 bits (19), Expect = 3.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 29     ttatataaattacaaattataca 51
              |||||||||||| ||||||||||
Sbjct: 118801 ttatataaattagaaattataca 118823
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>gb|AE009916.1|AE009916 Pyrobaculum aerophilum strain IM2 section 171 of 201 of the complete
            genome
          Length = 14086

 Score = 38.2 bits (19), Expect = 3.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 43   aattatacaagtttcaact 61
            |||||||||||||||||||
Sbjct: 2507 aattatacaagtttcaact 2525
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>tpg|BK000081.1| TPA: TPA_exp: Oryza sativa cellulose synthase-like A3 gene, complete
            cds
          Length = 12300

 Score = 38.2 bits (19), Expect = 3.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 20   tgttacaacttatataaat 38
            |||||||||||||||||||
Sbjct: 4793 tgttacaacttatataaat 4811
to top
>ref|XM_625117.1| PREDICTED: Apis mellifera similar to integrin alpha 1 (LOC552742),
            mRNA
          Length = 3159

 Score = 38.2 bits (19), Expect = 3.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 29   ttatataaattacaaatta 47
            |||||||||||||||||||
Sbjct: 2237 ttatataaattacaaatta 2219
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 38.2 bits (19), Expect = 3.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 30       tatataaattacaaattat 48
                |||||||||||||||||||
Sbjct: 15682789 tatataaattacaaattat 15682771
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 38.2 bits (19), Expect = 3.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 20      tgttacaacttatataaat 38
               |||||||||||||||||||
Sbjct: 6768686 tgttacaacttatataaat 6768704
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>gb|AC018470.11| Homo sapiens BAC clone RP11-572N21 from 2, complete sequence
          Length = 174437

 Score = 38.2 bits (19), Expect = 3.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 29     ttatataaattacaaatta 47
              |||||||||||||||||||
Sbjct: 143195 ttatataaattacaaatta 143213
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>gb|AC008113.4|AC008113 Genomic sequence for Arabidopsis thaliana BAC F12A21 from chromosome I,
             complete sequence
          Length = 114190

 Score = 38.2 bits (19), Expect = 3.3
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 22    ttacaacttatataaattacaaattat 48
             ||||||||| ||| |||||||||||||
Sbjct: 14481 ttacaacttttattaattacaaattat 14455
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>gb|AC117451.3| Homo sapiens 3 BAC RP11-331K15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 181637

 Score = 38.2 bits (19), Expect = 3.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 32    tataaattacaaattatac 50
             |||||||||||||||||||
Sbjct: 75127 tataaattacaaattatac 75109
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>dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0525F01
          Length = 151668

 Score = 38.2 bits (19), Expect = 3.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 20    tgttacaacttatataaat 38
             |||||||||||||||||||
Sbjct: 98365 tgttacaacttatataaat 98383
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>emb|AL954704.10| Zebrafish DNA sequence from clone DKEY-110K21 in linkage group 7,
              complete sequence
          Length = 179095

 Score = 38.2 bits (19), Expect = 3.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 22     ttacaacttatataaatta 40
              |||||||||||||||||||
Sbjct: 150502 ttacaacttatataaatta 150520
to top
>gb|AC005873.3|AC005873 citb_15_o_21, complete sequence
          Length = 195653

 Score = 38.2 bits (19), Expect = 3.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 22     ttacaacttatataaatta 40
              |||||||||||||||||||
Sbjct: 100793 ttacaacttatataaatta 100811
to top
>emb|BX569783.4| Zebrafish DNA sequence from clone CH211-245H14 in linkage group 20,
             complete sequence
          Length = 200617

 Score = 38.2 bits (19), Expect = 3.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 28    cttatataaattacaaatt 46
             |||||||||||||||||||
Sbjct: 75851 cttatataaattacaaatt 75833
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>gb|AE003482.4| Drosophila melanogaster chromosome 3L, section 16 of 83 of the complete
             sequence
          Length = 302417

 Score = 38.2 bits (19), Expect = 3.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 29    ttatataaattacaaattataca 51
             |||||||||||| ||||||||||
Sbjct: 65655 ttatataaattagaaattataca 65677
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 38.2 bits (19), Expect = 3.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 30       tatataaattacaaattat 48
                |||||||||||||||||||
Sbjct: 15770166 tatataaattacaaattat 15770148
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>emb|AL953839.10| Mouse DNA sequence from clone RP23-325L22 on chromosome 4, complete
             sequence
          Length = 80682

 Score = 38.2 bits (19), Expect = 3.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 29    ttatataaattacaaatta 47
             |||||||||||||||||||
Sbjct: 59474 ttatataaattacaaatta 59492


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 967,797
Number of Sequences: 3902068
Number of extensions: 967797
Number of successful extensions: 119329
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 119132
Number of HSP's gapped (non-prelim): 200
length of query: 80
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 59
effective length of database: 17,151,101,840
effective search space: 1011915008560
effective search space used: 1011915008560
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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