| Clone Name | rbaet79d09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|M61146.1|BLYPSAL Hordeum vulgare photosystem I protein (PSI-L) mRNA, complete cds Length = 777 Score = 248 bits (125), Expect = 3e-63 Identities = 125/125 (100%) Strand = Plus / Minus Query: 2 ttttttatgaggaatatgtaaaaattcatttatacatagaagactcgttcaggcaaccac 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 776 ttttttatgaggaatatgtaaaaattcatttatacatagaagactcgttcaggcaaccac 717 Query: 62 cgagaagagatggcatgatctggagacatcgtacatgcatgccacctattaatctacttg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 cgagaagagatggcatgatctggagacatcgtacatgcatgccacctattaatctacttg 657 Query: 122 aagaa 126 ||||| Sbjct: 656 aagaa 652
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.095 Identities = 22/22 (100%) Strand = Plus / Minus Query: 23 aaattcatttatacatagaaga 44 |||||||||||||||||||||| Sbjct: 5987801 aaattcatttatacatagaaga 5987780
>emb|AL662939.4|OSJN00143 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0013J13, complete sequence Length = 137572 Score = 44.1 bits (22), Expect = 0.095 Identities = 22/22 (100%) Strand = Plus / Minus Query: 23 aaattcatttatacatagaaga 44 |||||||||||||||||||||| Sbjct: 11198 aaattcatttatacatagaaga 11177
>emb|AL663018.4|OSJN00219 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0045O17, complete sequence Length = 137981 Score = 44.1 bits (22), Expect = 0.095 Identities = 22/22 (100%) Strand = Plus / Minus Query: 23 aaattcatttatacatagaaga 44 |||||||||||||||||||||| Sbjct: 131038 aaattcatttatacatagaaga 131017
>gb|DP000012.1| Macropus eugenii target 1 genomic scaffold Length = 1996640 Score = 42.1 bits (21), Expect = 0.38 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 atatgtaaaaattcatttata 35 ||||||||||||||||||||| Sbjct: 41414 atatgtaaaaattcatttata 41394
>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete sequence Length = 4332241 Score = 42.1 bits (21), Expect = 0.38 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 tttatgaggaatatgtaaaaa 25 ||||||||||||||||||||| Sbjct: 4009296 tttatgaggaatatgtaaaaa 4009316
>gb|AC145409.3| Macropus eugenii clone ME_KBa-528O13, complete sequence Length = 140426 Score = 42.1 bits (21), Expect = 0.38 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 atatgtaaaaattcatttata 35 ||||||||||||||||||||| Sbjct: 41414 atatgtaaaaattcatttata 41394
>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome I, complete sequence Length = 4277185 Score = 42.1 bits (21), Expect = 0.38 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 tttatgaggaatatgtaaaaa 25 ||||||||||||||||||||| Sbjct: 3949709 tttatgaggaatatgtaaaaa 3949729
>gb|AC132454.3| Mus musculus BAC clone RP23-127P22 from chromosome 19, complete sequence Length = 225152 Score = 40.1 bits (20), Expect = 1.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 20 taaaaattcatttatacatagaag 43 ||||||||||||||| |||||||| Sbjct: 218092 taaaaattcatttatccatagaag 218069
>gb|AC124513.3| Mus musculus BAC clone RP23-448C3 from chromosome 19, complete sequence Length = 202236 Score = 40.1 bits (20), Expect = 1.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 20 taaaaattcatttatacatagaag 43 ||||||||||||||| |||||||| Sbjct: 11868 taaaaattcatttatccatagaag 11845
>emb|AL731538.4| Human DNA sequence from clone RP11-457G5 on chromosome 10 Contains part of the gene for alpha-catenin-like protein (MGC26194) (VR22), complete sequence Length = 163119 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 tatgaggaatatgtaaaaat 26 |||||||||||||||||||| Sbjct: 64642 tatgaggaatatgtaaaaat 64661
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 atgaggaatatgtaaaaatt 27 |||||||||||||||||||| Sbjct: 24723095 atgaggaatatgtaaaaatt 24723114
>dbj|AP002843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0407B12 Length = 148762 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 atgaggaatatgtaaaaatt 27 |||||||||||||||||||| Sbjct: 91672 atgaggaatatgtaaaaatt 91691
>gb|AC022002.5| Homo sapiens chromosome 3 clone RP11-198P17 map 3p, complete sequence Length = 189097 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 tcgtacatgcatgccaccta 109 |||||||||||||||||||| Sbjct: 81350 tcgtacatgcatgccaccta 81369
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome Length = 5237682 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 atgtaaaaattcatttata 35 ||||||||||||||||||| Sbjct: 4055085 atgtaaaaattcatttata 4055103 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 6 ttatgaggaatatgtaaaa 24 ||||||||||||||||||| Sbjct: 1463465 ttatgaggaatatgtaaaa 1463483
>gb|AC145405.3| Gorilla gorilla gorilla clone CH255-421A19, complete sequence Length = 179099 Score = 38.2 bits (19), Expect = 5.9 Identities = 28/31 (90%) Strand = Plus / Plus Query: 2 ttttttatgaggaatatgtaaaaattcattt 32 |||| ||||| ||||||| |||||||||||| Sbjct: 176133 ttttctatgatgaatatggaaaaattcattt 176163
>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome Length = 5227419 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 atgtaaaaattcatttata 35 ||||||||||||||||||| Sbjct: 4067251 atgtaaaaattcatttata 4067269 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 6 ttatgaggaatatgtaaaa 24 ||||||||||||||||||| Sbjct: 1439129 ttatgaggaatatgtaaaa 1439147
>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome Length = 5228663 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 atgtaaaaattcatttata 35 ||||||||||||||||||| Sbjct: 4067624 atgtaaaaattcatttata 4067642 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 6 ttatgaggaatatgtaaaa 24 ||||||||||||||||||| Sbjct: 1439075 ttatgaggaatatgtaaaa 1439093
>gb|AC000111.1| Homo sapiens BAC clone CTB-68P20 from 7, complete sequence Length = 149554 Score = 38.2 bits (19), Expect = 5.9 Identities = 28/31 (90%) Strand = Plus / Plus Query: 2 ttttttatgaggaatatgtaaaaattcattt 32 |||| ||||| ||||||| |||||||||||| Sbjct: 58990 ttttctatgatgaatatggaaaaattcattt 59020
>gb|AY296710.1| Castianeira sp. MCH-2003 16S ribosomal RNA and tRNA-Leu genes, partial sequence; mitochondrial genes for mitochondrial products Length = 596 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 atgtaaaaattcatttata 35 ||||||||||||||||||| Sbjct: 147 atgtaaaaattcatttata 165
>gb|AC129202.3| Mus musculus BAC clone RP24-225J1 from chromosome 13, complete sequence Length = 168558 Score = 38.2 bits (19), Expect = 5.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 16 tatgtaaaaattcatttatacat 38 ||||||||||||||| ||||||| Sbjct: 150499 tatgtaaaaattcatgtatacat 150477
>gb|AC126678.3| Mus musculus BAC clone RP24-231D7 from chromosome 13, complete sequence Length = 150512 Score = 38.2 bits (19), Expect = 5.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 16 tatgtaaaaattcatttatacat 38 ||||||||||||||| ||||||| Sbjct: 20967 tatgtaaaaattcatgtatacat 20945
>gb|CP000001.1| Bacillus cereus E33L, complete genome Length = 5300915 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 atgtaaaaattcatttata 35 ||||||||||||||||||| Sbjct: 4109312 atgtaaaaattcatttata 4109330 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 6 ttatgaggaatatgtaaaa 24 ||||||||||||||||||| Sbjct: 1474082 ttatgaggaatatgtaaaa 1474100
>emb|AL445668.10| Human DNA sequence from clone RP11-234O23 on chromosome 13 Contains the 3' end of a novel gene, complete sequence Length = 168068 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 14 aatatgtaaaaattcattt 32 ||||||||||||||||||| Sbjct: 45426 aatatgtaaaaattcattt 45444
>emb|AL137181.8| Human DNA sequence from clone RP1-23O21 on chromosome 6 Contains an acidic calponin 3 (CNN3) pseudogene, complete sequence Length = 60248 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 15 atatgtaaaaattcattta 33 ||||||||||||||||||| Sbjct: 8475 atatgtaaaaattcattta 8493
>emb|BX890572.9| Zebrafish DNA sequence from clone CH211-234F20 in linkage group 4 Contains the gene for a novel protein containing two notch (DSL) domains and an EF hand domain, the gene for a novel protein similar to vertebrate myosin binding protein H (MYBPH), the gene for a novel protein sinilar to human and mouse CWF19-like 1, cell cycle control (S. pombe) (CWF19L1), the gene for a novel protein (zgc:55718), the gene for a novel protein containing Kelch motifs and a BTB/POZ domain, the sycp3 gene for synaptonemal complex protein 3, a novel gene and a CpG island, complete sequence Length = 166208 Score = 38.2 bits (19), Expect = 5.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 17 atgtaaaaattcatttatacata 39 |||||||||||||||||| |||| Sbjct: 26030 atgtaaaaattcatttattcata 26052
>emb|AL591481.5| Zebrafish DNA sequence from clone BUSM1-101L20 in linkage group 2 Contains 37 TCR-alpha V segments (II-1 to II-37 according to annotation by Tatsuya Ota) two of which are pseudogenes (II-21, II-22) and a CpG island, complete sequence Length = 100317 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 atgtaaaaattcatttata 35 ||||||||||||||||||| Sbjct: 80610 atgtaaaaattcatttata 80592
>emb|AL592550.11| Zebrafish DNA sequence from clone BUSM1-18F12 in linkage group 2 Contains 37 TCR-alpha V segments (II-11 to II-26, II-28 to II-48) three of which are pseudogenes (II-21, II-22, II-31), complete sequence Length = 96481 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 atgtaaaaattcatttata 35 ||||||||||||||||||| Sbjct: 47620 atgtaaaaattcatttata 47602
>emb|BX908384.15| Zebrafish DNA sequence from clone DKEY-38K3 in linkage group 13, complete sequence Length = 213699 Score = 38.2 bits (19), Expect = 5.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 16 tatgtaaaaattcatttatacat 38 ||||||||||| ||||||||||| Sbjct: 90085 tatgtaaaaatgcatttatacat 90063
>gb|AC107300.6| Homo sapiens 3 BAC RP11-516H5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161699 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 14 aatatgtaaaaattcattt 32 ||||||||||||||||||| Sbjct: 29537 aatatgtaaaaattcattt 29555
>emb|BX649403.4| Zebrafish DNA sequence from clone CH211-153M11 in linkage group 13, complete sequence Length = 170097 Score = 38.2 bits (19), Expect = 5.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 16 tatgtaaaaattcatttatacat 38 ||||||||||| ||||||||||| Sbjct: 32446 tatgtaaaaatgcatttatacat 32468
>gb|AC093500.2| Drosophila melanogaster 3L BAC RP98-29P5 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 173558 Score = 38.2 bits (19), Expect = 5.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 18 tgtaaaaattcatttatacatag 40 ||||||||| ||||||||||||| Sbjct: 165471 tgtaaaaatacatttatacatag 165449
>gb|AC010716.4| Drosophila melanogaster 3L BAC RP98-11A21 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 173386 Score = 38.2 bits (19), Expect = 5.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 18 tgtaaaaattcatttatacatag 40 ||||||||| ||||||||||||| Sbjct: 70400 tgtaaaaatacatttatacatag 70378
>gb|DQ388145.1| Homo sapiens isolate cftr13838_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) gene, complete cds; and CTTNBP2 (CTTNBP2) gene, partial cds Length = 422127 Score = 38.2 bits (19), Expect = 5.9 Identities = 28/31 (90%) Strand = Plus / Plus Query: 2 ttttttatgaggaatatgtaaaaattcattt 32 |||| ||||| ||||||| |||||||||||| Sbjct: 45458 ttttctatgatgaatatggaaaaattcattt 45488
>gb|DQ388144.1| Homo sapiens isolate cftr13838_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 423518 Score = 38.2 bits (19), Expect = 5.9 Identities = 28/31 (90%) Strand = Plus / Plus Query: 2 ttttttatgaggaatatgtaaaaattcattt 32 |||| ||||| ||||||| |||||||||||| Sbjct: 46840 ttttctatgatgaatatggaaaaattcattt 46870
>gb|DQ388143.1| Homo sapiens isolate cftr11589_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 460130 Score = 38.2 bits (19), Expect = 5.9 Identities = 28/31 (90%) Strand = Plus / Plus Query: 2 ttttttatgaggaatatgtaaaaattcattt 32 |||| ||||| ||||||| |||||||||||| Sbjct: 47305 ttttctatgatgaatatggaaaaattcattt 47335
>gb|DQ388141.1| Homo sapiens isolate cftr11521_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 459743 Score = 38.2 bits (19), Expect = 5.9 Identities = 28/31 (90%) Strand = Plus / Plus Query: 2 ttttttatgaggaatatgtaaaaattcattt 32 |||| ||||| ||||||| |||||||||||| Sbjct: 49833 ttttctatgatgaatatggaaaaattcattt 49863
>gb|DQ388140.1| Homo sapiens isolate cftr11521_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 468331 Score = 38.2 bits (19), Expect = 5.9 Identities = 28/31 (90%) Strand = Plus / Plus Query: 2 ttttttatgaggaatatgtaaaaattcattt 32 |||| ||||| ||||||| |||||||||||| Sbjct: 55672 ttttctatgatgaatatggaaaaattcattt 55702
>gb|DQ388139.1| Homo sapiens isolate cftr11376_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 480116 Score = 38.2 bits (19), Expect = 5.9 Identities = 28/31 (90%) Strand = Plus / Plus Query: 2 ttttttatgaggaatatgtaaaaattcattt 32 |||| ||||| ||||||| |||||||||||| Sbjct: 61686 ttttctatgatgaatatggaaaaattcattt 61716
>gb|DQ388138.1| Homo sapiens isolate cftr11376_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 450881 Score = 38.2 bits (19), Expect = 5.9 Identities = 28/31 (90%) Strand = Plus / Plus Query: 2 ttttttatgaggaatatgtaaaaattcattt 32 |||| ||||| ||||||| |||||||||||| Sbjct: 52289 ttttctatgatgaatatggaaaaattcattt 52319
>gb|DQ388135.1| Homo sapiens isolate cftr11321_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 429415 Score = 38.2 bits (19), Expect = 5.9 Identities = 28/31 (90%) Strand = Plus / Plus Query: 2 ttttttatgaggaatatgtaaaaattcattt 32 |||| ||||| ||||||| |||||||||||| Sbjct: 46106 ttttctatgatgaatatggaaaaattcattt 46136
>gb|DQ388134.1| Homo sapiens isolate cftr11321_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 434687 Score = 38.2 bits (19), Expect = 5.9 Identities = 28/31 (90%) Strand = Plus / Plus Query: 2 ttttttatgaggaatatgtaaaaattcattt 32 |||| ||||| ||||||| |||||||||||| Sbjct: 51323 ttttctatgatgaatatggaaaaattcattt 51353
>gb|DQ388137.1| Homo sapiens isolate cftr11373_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 411333 Score = 38.2 bits (19), Expect = 5.9 Identities = 28/31 (90%) Strand = Plus / Plus Query: 2 ttttttatgaggaatatgtaaaaattcattt 32 |||| ||||| ||||||| |||||||||||| Sbjct: 45035 ttttctatgatgaatatggaaaaattcattt 45065
>gb|DQ388133.1| Homo sapiens isolate cftr10976_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 462987 Score = 38.2 bits (19), Expect = 5.9 Identities = 28/31 (90%) Strand = Plus / Plus Query: 2 ttttttatgaggaatatgtaaaaattcattt 32 |||| ||||| ||||||| |||||||||||| Sbjct: 48975 ttttctatgatgaatatggaaaaattcattt 49005
>gb|DQ388132.1| Homo sapiens isolate cftr10976_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 456610 Score = 38.2 bits (19), Expect = 5.9 Identities = 28/31 (90%) Strand = Plus / Plus Query: 2 ttttttatgaggaatatgtaaaaattcattt 32 |||| ||||| ||||||| |||||||||||| Sbjct: 48137 ttttctatgatgaatatggaaaaattcattt 48167
>gb|DQ388131.1| Homo sapiens isolate cftr10543_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 443905 Score = 38.2 bits (19), Expect = 5.9 Identities = 28/31 (90%) Strand = Plus / Plus Query: 2 ttttttatgaggaatatgtaaaaattcattt 32 |||| ||||| ||||||| |||||||||||| Sbjct: 45001 ttttctatgatgaatatggaaaaattcattt 45031
>gb|DQ388130.1| Homo sapiens isolate cftr10543_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 459213 Score = 38.2 bits (19), Expect = 5.9 Identities = 28/31 (90%) Strand = Plus / Plus Query: 2 ttttttatgaggaatatgtaaaaattcattt 32 |||| ||||| ||||||| |||||||||||| Sbjct: 45001 ttttctatgatgaatatggaaaaattcattt 45031
>gb|DQ388129.1| Homo sapiens isolate cftr10540_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 458144 Score = 38.2 bits (19), Expect = 5.9 Identities = 28/31 (90%) Strand = Plus / Plus Query: 2 ttttttatgaggaatatgtaaaaattcattt 32 |||| ||||| ||||||| |||||||||||| Sbjct: 45017 ttttctatgatgaatatggaaaaattcattt 45047
>gb|DQ388128.1| Homo sapiens isolate cftr10540_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 451649 Score = 38.2 bits (19), Expect = 5.9 Identities = 28/31 (90%) Strand = Plus / Plus Query: 2 ttttttatgaggaatatgtaaaaattcattt 32 |||| ||||| ||||||| |||||||||||| Sbjct: 45017 ttttctatgatgaatatggaaaaattcattt 45047
>gb|AC166600.4| Nomascus leucogenys leucogenys clone CH271-368I9, complete sequence Length = 179470 Score = 38.2 bits (19), Expect = 5.9 Identities = 28/31 (90%) Strand = Plus / Plus Query: 2 ttttttatgaggaatatgtaaaaattcattt 32 |||| ||||| ||||||| |||||||||||| Sbjct: 87124 ttttctatgatgaatatggaaaaattcattt 87154
>gb|DQ356264.1| Homo sapiens isolate cftr14672_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 425451 Score = 38.2 bits (19), Expect = 5.9 Identities = 28/31 (90%) Strand = Plus / Plus Query: 2 ttttttatgaggaatatgtaaaaattcattt 32 |||| ||||| ||||||| |||||||||||| Sbjct: 48867 ttttctatgatgaatatggaaaaattcattt 48897
>gb|DQ356263.1| Homo sapiens isolate cftr14672_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 458173 Score = 38.2 bits (19), Expect = 5.9 Identities = 28/31 (90%) Strand = Plus / Plus Query: 2 ttttttatgaggaatatgtaaaaattcattt 32 |||| ||||| ||||||| |||||||||||| Sbjct: 53970 ttttctatgatgaatatggaaaaattcattt 54000
>gb|DQ356262.1| Homo sapiens isolate cftr14663_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 451123 Score = 38.2 bits (19), Expect = 5.9 Identities = 28/31 (90%) Strand = Plus / Plus Query: 2 ttttttatgaggaatatgtaaaaattcattt 32 |||| ||||| ||||||| |||||||||||| Sbjct: 47304 ttttctatgatgaatatggaaaaattcattt 47334
>gb|DQ356261.1| Homo sapiens isolate cftr14663_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) gene, partial cds; and CTTNBP2 (CTTNBP2) gene, complete cds Length = 449665 Score = 38.2 bits (19), Expect = 5.9 Identities = 28/31 (90%) Strand = Plus / Plus Query: 2 ttttttatgaggaatatgtaaaaattcattt 32 |||| ||||| ||||||| |||||||||||| Sbjct: 49591 ttttctatgatgaatatggaaaaattcattt 49621
>gb|DQ356260.1| Homo sapiens isolate cftr10975_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 447228 Score = 38.2 bits (19), Expect = 5.9 Identities = 28/31 (90%) Strand = Plus / Plus Query: 2 ttttttatgaggaatatgtaaaaattcattt 32 |||| ||||| ||||||| |||||||||||| Sbjct: 48963 ttttctatgatgaatatggaaaaattcattt 48993
>gb|DQ356259.1| Homo sapiens isolate cftr10975_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 450685 Score = 38.2 bits (19), Expect = 5.9 Identities = 28/31 (90%) Strand = Plus / Plus Query: 2 ttttttatgaggaatatgtaaaaattcattt 32 |||| ||||| ||||||| |||||||||||| Sbjct: 48125 ttttctatgatgaatatggaaaaattcattt 48155
>gb|DQ356258.1| Homo sapiens isolate cftr10471_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) gene, partial cds; and CTTNBP2 (CTTNBP2) gene, complete cds Length = 461061 Score = 38.2 bits (19), Expect = 5.9 Identities = 28/31 (90%) Strand = Plus / Plus Query: 2 ttttttatgaggaatatgtaaaaattcattt 32 |||| ||||| ||||||| |||||||||||| Sbjct: 33333 ttttctatgatgaatatggaaaaattcattt 33363
>gb|DQ356257.1| Homo sapiens isolate cftr10471_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 495329 Score = 38.2 bits (19), Expect = 5.9 Identities = 28/31 (90%) Strand = Plus / Plus Query: 2 ttttttatgaggaatatgtaaaaattcattt 32 |||| ||||| ||||||| |||||||||||| Sbjct: 57624 ttttctatgatgaatatggaaaaattcattt 57654
>gb|DP000025.1| Gorilla gorilla gorilla target 1 genomic scaffold Length = 1787293 Score = 38.2 bits (19), Expect = 5.9 Identities = 28/31 (90%) Strand = Plus / Plus Query: 2 ttttttatgaggaatatgtaaaaattcattt 32 |||| ||||| ||||||| |||||||||||| Sbjct: 1292716 ttttctatgatgaatatggaaaaattcattt 1292746
>gb|DP000026.1| Pongo pygmaeus target 1 genomic scaffold Length = 1819346 Score = 38.2 bits (19), Expect = 5.9 Identities = 28/31 (90%) Strand = Plus / Plus Query: 2 ttttttatgaggaatatgtaaaaattcattt 32 |||| ||||| ||||||| |||||||||||| Sbjct: 1288250 ttttctatgatgaatatggaaaaattcattt 1288280
>gb|AC116957.2| Dictyostelium discoideum chromosome 2 map 1685067-2090751 strain AX4, complete sequence Length = 405682 Score = 38.2 bits (19), Expect = 5.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 20 taaaaattcatttatacatagaa 42 |||||||| |||||||||||||| Sbjct: 309737 taaaaatttatttatacatagaa 309715
>gb|DQ354391.1| Homo sapiens isolate cftr01814_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 439798 Score = 38.2 bits (19), Expect = 5.9 Identities = 28/31 (90%) Strand = Plus / Plus Query: 2 ttttttatgaggaatatgtaaaaattcattt 32 |||| ||||| ||||||| |||||||||||| Sbjct: 59961 ttttctatgatgaatatggaaaaattcattt 59991
>gb|DQ354390.1| Homo sapiens isolate cftr01814_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 437219 Score = 38.2 bits (19), Expect = 5.9 Identities = 28/31 (90%) Strand = Plus / Plus Query: 2 ttttttatgaggaatatgtaaaaattcattt 32 |||| ||||| ||||||| |||||||||||| Sbjct: 51351 ttttctatgatgaatatggaaaaattcattt 51381
>gb|DQ354389.1| Homo sapiens isolate cftr14683_B cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 430078 Score = 38.2 bits (19), Expect = 5.9 Identities = 28/31 (90%) Strand = Plus / Plus Query: 2 ttttttatgaggaatatgtaaaaattcattt 32 |||| ||||| ||||||| |||||||||||| Sbjct: 46702 ttttctatgatgaatatggaaaaattcattt 46732
>gb|DQ354388.1| Homo sapiens isolate cftr14683_A cystic fibrosis transmembrane conductance regulator ATP-binding cassette sub-family C member (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds Length = 461441 Score = 38.2 bits (19), Expect = 5.9 Identities = 28/31 (90%) Strand = Plus / Plus Query: 2 ttttttatgaggaatatgtaaaaattcattt 32 |||| ||||| ||||||| |||||||||||| Sbjct: 46850 ttttctatgatgaatatggaaaaattcattt 46880
>gb|AC156989.3| Mus musculus chromosome 1, clone RP23-379L2, complete sequence Length = 188691 Score = 38.2 bits (19), Expect = 5.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 10 gaggaatatgtaaaaattcattt 32 ||||||||| ||||||||||||| Sbjct: 65379 gaggaatatataaaaattcattt 65357
>emb|AL391262.3|CNS06C86 Human chromosome 14 DNA sequence BAC R-817G13 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 171296 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 13 gaatatgtaaaaattcatt 31 ||||||||||||||||||| Sbjct: 124951 gaatatgtaaaaattcatt 124933
>gb|AF042062.1|AF042062 Mycosphaerella graminicola succinate dehydrogenase iron-sulphur protein gene, complete cds Length = 3486 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 81 ctggagacatcgtacatgc 99 ||||||||||||||||||| Sbjct: 2175 ctggagacatcgtacatgc 2157
>gb|AE003564.3| Drosophila melanogaster chromosome 3L, section 21 of 83 of the complete sequence Length = 315944 Score = 38.2 bits (19), Expect = 5.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 18 tgtaaaaattcatttatacatag 40 ||||||||| ||||||||||||| Sbjct: 50500 tgtaaaaatacatttatacatag 50478
>gb|AC004664.1|AC004664 Homo sapiens chromosome 4 clone C0500H20 map 4p16, complete sequence Length = 172072 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 atgtaaaaattcatttata 35 ||||||||||||||||||| Sbjct: 143134 atgtaaaaattcatttata 143116
>emb|AL117694.5|CNS01DRQ Human chromosome 14 DNA sequence BAC R-226F19 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 166279 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 13 gaatatgtaaaaattcatt 31 ||||||||||||||||||| Sbjct: 161219 gaatatgtaaaaattcatt 161237
>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome Length = 5227293 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 atgtaaaaattcatttata 35 ||||||||||||||||||| Sbjct: 4067124 atgtaaaaattcatttata 4067142 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 6 ttatgaggaatatgtaaaa 24 ||||||||||||||||||| Sbjct: 1439006 ttatgaggaatatgtaaaa 1439024
>gb|AC147437.2| Gallus gallus BAC clone CH261-80L21 from chromosome unknown, complete sequence Length = 221338 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 13 gaatatgtaaaaattcatt 31 ||||||||||||||||||| Sbjct: 164488 gaatatgtaaaaattcatt 164506
>gb|AC147639.3| Mus musculus BAC clone RP23-115M6 from 13, complete sequence Length = 187485 Score = 38.2 bits (19), Expect = 5.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 16 tatgtaaaaattcatttatacat 38 ||||||||||||||| ||||||| Sbjct: 146130 tatgtaaaaattcatgtatacat 146152
>emb|AL935175.6| Mouse DNA sequence from clone RP23-397E13 on chromosome 2, complete sequence Length = 158592 Score = 38.2 bits (19), Expect = 5.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 11 aggaatatgtaaaaattcattta 33 |||||||||||| |||||||||| Sbjct: 36105 aggaatatgtaagaattcattta 36083 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,412,132 Number of Sequences: 3902068 Number of extensions: 1412132 Number of successful extensions: 99819 Number of sequences better than 10.0: 75 Number of HSP's better than 10.0 without gapping: 75 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 99176 Number of HSP's gapped (non-prelim): 643 length of query: 126 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 105 effective length of database: 17,151,101,840 effective search space: 1800865693200 effective search space used: 1800865693200 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)