ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet79b06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | ARF1_SALBA (O48649) ADP-ribosylation factor 1 | 29 | 3.1 | 2 | ARF2_DROME (P40945) ADP-ribosylation factor 2 (dARF II) | 29 | 4.0 | 3 | ARF_VIGUN (O48920) ADP-ribosylation factor | 28 | 5.3 | 4 | ARF_MAIZE (P49076) ADP-ribosylation factor | 28 | 5.3 | 5 | ARF2_ARATH (Q9SRC3) ADP-ribosylation factor 2 (AtARF2) | 28 | 5.3 | 6 | ARF1_DAUCA (P51822) ADP-ribosylation factor 1 | 28 | 5.3 | 7 | ARF1_CATRO (O23778) ADP-ribosylation factor 1 | 28 | 5.3 | 8 | ARF1_ARATH (P36397) ADP-ribosylation factor 1 | 28 | 5.3 |
|---|
>ARF1_SALBA (O48649) ADP-ribosylation factor 1| Length = 180 Score = 29.3 bits (64), Expect = 3.1 Identities = 10/39 (25%), Positives = 25/39 (64%) Frame = +1 Query: 40 LIETNVRDQLSRQQSKTHPYIQQDEILKIYILVFPHERD 156 ++++N RD++ + + H + +DE+ +LVF +++D Sbjct: 90 VVDSNDRDRVGEARDELHRMLNEDELRDAVLLVFANKQD 128
>ARF2_DROME (P40945) ADP-ribosylation factor 2 (dARF II)| Length = 179 Score = 28.9 bits (63), Expect = 4.0 Identities = 10/39 (25%), Positives = 26/39 (66%) Frame = +1 Query: 40 LIETNVRDQLSRQQSKTHPYIQQDEILKIYILVFPHERD 156 ++++N RD+++ + + +Q+DE+ +LVF +++D Sbjct: 90 VVDSNDRDRITEAERELQNMLQEDELRDAVLLVFANKQD 128
>ARF_VIGUN (O48920) ADP-ribosylation factor| Length = 180 Score = 28.5 bits (62), Expect = 5.3 Identities = 10/39 (25%), Positives = 25/39 (64%) Frame = +1 Query: 40 LIETNVRDQLSRQQSKTHPYIQQDEILKIYILVFPHERD 156 ++++N RD++ + + H + +DE+ +LVF +++D Sbjct: 90 VVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQD 128
>ARF_MAIZE (P49076) ADP-ribosylation factor| Length = 180 Score = 28.5 bits (62), Expect = 5.3 Identities = 10/39 (25%), Positives = 25/39 (64%) Frame = +1 Query: 40 LIETNVRDQLSRQQSKTHPYIQQDEILKIYILVFPHERD 156 ++++N RD++ + + H + +DE+ +LVF +++D Sbjct: 90 VVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQD 128
>ARF2_ARATH (Q9SRC3) ADP-ribosylation factor 2 (AtARF2)| Length = 180 Score = 28.5 bits (62), Expect = 5.3 Identities = 10/39 (25%), Positives = 25/39 (64%) Frame = +1 Query: 40 LIETNVRDQLSRQQSKTHPYIQQDEILKIYILVFPHERD 156 ++++N RD++ + + H + +DE+ +LVF +++D Sbjct: 90 VVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQD 128
>ARF1_DAUCA (P51822) ADP-ribosylation factor 1| Length = 180 Score = 28.5 bits (62), Expect = 5.3 Identities = 10/39 (25%), Positives = 25/39 (64%) Frame = +1 Query: 40 LIETNVRDQLSRQQSKTHPYIQQDEILKIYILVFPHERD 156 ++++N RD++ + + H + +DE+ +LVF +++D Sbjct: 90 VVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQD 128
>ARF1_CATRO (O23778) ADP-ribosylation factor 1| Length = 180 Score = 28.5 bits (62), Expect = 5.3 Identities = 10/39 (25%), Positives = 25/39 (64%) Frame = +1 Query: 40 LIETNVRDQLSRQQSKTHPYIQQDEILKIYILVFPHERD 156 ++++N RD++ + + H + +DE+ +LVF +++D Sbjct: 90 VVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQD 128
>ARF1_ARATH (P36397) ADP-ribosylation factor 1| Length = 180 Score = 28.5 bits (62), Expect = 5.3 Identities = 10/39 (25%), Positives = 25/39 (64%) Frame = +1 Query: 40 LIETNVRDQLSRQQSKTHPYIQQDEILKIYILVFPHERD 156 ++++N RD++ + + H + +DE+ +LVF +++D Sbjct: 90 VVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQD 128 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.134 0.365 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,436,129 Number of Sequences: 219361 Number of extensions: 259277 Number of successful extensions: 711 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 707 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 711 length of database: 80,573,946 effective HSP length: 28 effective length of database: 74,431,838 effective search space used: 1786364112 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
