ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet78g10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC114629.12| Mus musculus chromosome 1, clone RP24-111F20, co... 48 0.017
2gb|AC122543.1| Genomic sequence for Brassica oleracea, clone B21... 46 0.067
3gb|DP000024.1| Eulemur macaco macaco target 1 genomic scaffold 46 0.067
4emb|CR405715.16| Zebrafish DNA sequence from clone DKEY-47K20 in... 44 0.27
5gb|AC122811.4| Mus musculus BAC clone RP23-281J12 from 12, compl... 42 1.1
6gb|AC102132.3| Mus musculus chromosome 18, clone RP23-231D1, com... 42 1.1
7gb|AC152061.6| Mus musculus BAC clone RP23-351K4 from chromosome... 42 1.1
8gb|AC091667.9| Homo sapiens chromosome 10 clone RP11-169K19, com... 42 1.1
9gb|AC005873.3|AC005873 citb_15_o_21, complete sequence 42 1.1
10gb|AC168073.4| Mus musculus BAC clone RP23-60N8 from chromosome ... 40 4.2
11gb|AC157931.11| Mus musculus chromosome 5, clone RP24-159I10, co... 40 4.2
12gb|AC122893.6| Mus musculus BAC clone RP23-67C3 from chromosome ... 40 4.2
13ref|XM_878577.1| PREDICTED: Bos taurus similar to transcription ... 40 4.2
14ref|XM_878545.1| PREDICTED: Bos taurus similar to transcription ... 40 4.2
15ref|XM_878504.1| PREDICTED: Bos taurus similar to transcription ... 40 4.2
16ref|XM_878469.1| PREDICTED: Bos taurus similar to transcription ... 40 4.2
17ref|XM_611661.2| PREDICTED: Bos taurus similar to transcription ... 40 4.2
18gb|AC120386.12| Mus musculus chromosome 9, clone RP24-294A16, co... 40 4.2
19gb|AC161345.4| Mus musculus chromosome 5, clone RP23-189N6, comp... 40 4.2
20gb|AC126459.3| Mus musculus BAC clone RP23-181A8 from chromosome... 40 4.2
21gb|BC011397.1| Mus musculus transcription factor 7-like 2, T-cel... 40 4.2
22gb|AC122339.3| Mus musculus BAC clone RP23-353L10 from chromosom... 40 4.2
23ref|XM_723974.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 4.2
24gb|AC118695.10| Mus musculus chromosome 19, clone RP24-62C10, co... 40 4.2
25gb|AC146585.18| Medicago truncatula clone mth2-68o3, complete se... 40 4.2
26gb|AC104323.27| Mus musculus strain C57BL/6J chromosome 17 clone... 40 4.2
27gb|AC140916.17| Medicago truncatula clone mth2-12b2, complete se... 40 4.2
28emb|AL451084.19| Human DNA sequence from clone RP11-357H24 on ch... 40 4.2
29emb|AL512655.17| Human DNA sequence from clone RP11-536C2 on chr... 40 4.2
30gb|BC052022.1| Mus musculus transcription factor 7-like 2, T-cel... 40 4.2
31emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS... 40 4.2
32emb|AL596111.7| Mouse DNA sequence from clone RP23-188E9 on chro... 40 4.2
33gb|AC005727.3| Arabidopsis thaliana chromosome 2 clone F8N16 map... 40 4.2
34gb|AC091867.3| Homo sapiens chromosome 5 clone CTD-2365E22, comp... 40 4.2
35dbj|AK138900.1| Mus musculus 0 day neonate thymus cDNA, RIKEN fu... 40 4.2
36emb|BX842571.5| Zebrafish DNA sequence from clone DKEY-16G11 in ... 40 4.2
37dbj|AK052583.1| Mus musculus 13 days embryo stomach cDNA, RIKEN ... 40 4.2
38gb|AF174294.1|AF174294 Gossypium arboreum (+)-delta-cadinene syt... 40 4.2
39gb|AY224188.1| Medicago truncatula adenosylhomocysteinase (AHC1)... 40 4.2
40dbj|AK035059.1| Mus musculus 12 days embryo embryonic body betwe... 40 4.2
41dbj|AK038720.1| Mus musculus adult male hypothalamus cDNA, RIKEN... 40 4.2
42dbj|AK048536.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 40 4.2
43dbj|AK018098.1| Mus musculus 11 days embryo head cDNA, RIKEN ful... 40 4.2
44gb|AC022203.4|AC022203 Homo sapiens BAC clone RP11-490K15 from 1... 40 4.2
45dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.2
46emb|BX005026.10| Zebrafish DNA sequence from clone DKEY-11J5, co... 40 4.2
47emb|BX648364.1|HSM808512 Homo sapiens mRNA; cDNA DKFZp686K06191 ... 40 4.2
48emb|CR847870.16| Zebrafish DNA sequence from clone DKEY-170G11 i... 40 4.2
49emb|AJ270778.1|HSA270778 Homo sapiens partial TCF-4 gene for T-c... 40 4.2
50gb|AC079446.30| Mus musculus strain C57BL/6J chromosome X clone ... 40 4.2
51emb|BX005101.8| Zebrafish DNA sequence from clone CH211-139G10 i... 40 4.2
52emb|AL672268.18| Mouse DNA sequence from clone RP23-171J18 on ch... 40 4.2
53emb|AL607002.3|OSJN00117 Oryza sativa genomic DNA, chromosome 4,... 40 4.2
54ref|NM_009333.2| Mus musculus transcription factor 7-like 2, T-c... 40 4.2
55gb|AC134246.4| Mus musculus BAC clone RP23-199B2 from 3, complet... 40 4.2
56gb|AC134856.3| Mus musculus BAC clone RP23-291B16 from 18, compl... 40 4.2
57gb|AC145168.5| Mus musculus BAC clone RP23-398K14 from 3, comple... 40 4.2
58emb|CT025736.6| Mouse DNA sequence from clone RP23-469A22 on chr... 40 4.2
59gb|J02836.1|MUSGUSB Mouse beta-glucuronidase gene, complete cds 40 4.2
60emb|AL606904.12| Mouse DNA sequence from clone RP23-182D20 on ch... 40 4.2
61emb|AL732480.12| Mouse DNA sequence from clone RP23-11N21 on chr... 40 4.2
62gb|AY879659.1| Theropithecus gelada Alu insertion locus Agilis_Y... 40 4.2
63gb|AY879658.1| Cercocebus agilis Alu insertion locus Agilis_Yd_68 40 4.2
64gb|AY879657.1| Papio cynocephalus Alu insertion locus Agilis_Yd_68 40 4.2 
>gb|AC114629.12| Mus musculus chromosome 1, clone RP24-111F20, complete sequence
          Length = 178437

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 260   ggctggtgagatgccttggtgggt 283
             ||||||||||||||||||||||||
Sbjct: 57534 ggctggtgagatgccttggtgggt 57511
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>gb|AC122543.1| Genomic sequence for Brassica oleracea, clone B21H13, complete sequence
          Length = 101563

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 8     acattttatatataaacttacag 30
             |||||||||||||||||||||||
Sbjct: 12486 acattttatatataaacttacag 12508
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>gb|DP000024.1| Eulemur macaco macaco target 1 genomic scaffold
          Length = 1570569

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 225     gcatgtgtgggatgaaaatccaa 247
               |||||||||||||||||||||||
Sbjct: 1456526 gcatgtgtgggatgaaaatccaa 1456504
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>emb|CR405715.16| Zebrafish DNA sequence from clone DKEY-47K20 in linkage group 18,
             complete sequence
          Length = 170849

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 76    aataatactggatatataagca 97
             ||||||||||||||||||||||
Sbjct: 12710 aataatactggatatataagca 12731
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>gb|AC122811.4| Mus musculus BAC clone RP23-281J12 from 12, complete sequence
          Length = 169618

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 260   ggctggtgagatgccttggtgggtt 284
             ||||||||||||| |||||||||||
Sbjct: 24157 ggctggtgagatggcttggtgggtt 24133
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>gb|AC102132.3| Mus musculus chromosome 18, clone RP23-231D1, complete sequence
          Length = 183544

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 260    ggctggtgagatgccttggtgggtt 284
              ||||||||||||| |||||||||||
Sbjct: 122040 ggctggtgagatggcttggtgggtt 122016
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>gb|AC152061.6| Mus musculus BAC clone RP23-351K4 from chromosome 12, complete sequence
          Length = 206383

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 260    ggctggtgagatgccttggtgggtt 284
              ||||||||||||| |||||||||||
Sbjct: 179730 ggctggtgagatggcttggtgggtt 179706
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>gb|AC091667.9| Homo sapiens chromosome 10 clone RP11-169K19, complete sequence
          Length = 144125

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 91    ataagcataaacattaattgt 111
             |||||||||||||||||||||
Sbjct: 44026 ataagcataaacattaattgt 44046
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>gb|AC005873.3|AC005873 citb_15_o_21, complete sequence
          Length = 195653

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 91    ataagcataaacattaattgt 111
             |||||||||||||||||||||
Sbjct: 86885 ataagcataaacattaattgt 86865
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>gb|AC168073.4| Mus musculus BAC clone RP23-60N8 from chromosome 7, complete sequence
          Length = 238764

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 290    tgtgaccctgacgccctggt 309
              ||||||||||||||||||||
Sbjct: 101507 tgtgaccctgacgccctggt 101526
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>gb|AC157931.11| Mus musculus chromosome 5, clone RP24-159I10, complete sequence
          Length = 147518

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 260    ggctggtgagatgccttggtgggt 283
              ||||||||||||| ||||||||||
Sbjct: 111544 ggctggtgagatggcttggtgggt 111521
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>gb|AC122893.6| Mus musculus BAC clone RP23-67C3 from chromosome 17, complete sequence
          Length = 206456

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 260    ggctggtgagatgccttggt 279
              ||||||||||||||||||||
Sbjct: 148318 ggctggtgagatgccttggt 148337
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>ref|XM_878577.1| PREDICTED: Bos taurus similar to transcription factor 7-like 2,
            T-cell specific, HMG-box, transcript variant 8
            (LOC540481), mRNA
          Length = 3229

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 8    acattttatatataaactta 27
            ||||||||||||||||||||
Sbjct: 2337 acattttatatataaactta 2318
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>ref|XM_878545.1| PREDICTED: Bos taurus similar to transcription factor 7-like 2,
            T-cell specific, HMG-box, transcript variant 7
            (LOC540481), mRNA
          Length = 3156

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 8    acattttatatataaactta 27
            ||||||||||||||||||||
Sbjct: 2264 acattttatatataaactta 2245
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>ref|XM_878504.1| PREDICTED: Bos taurus similar to transcription factor 7-like 2,
            T-cell specific, HMG-box, transcript variant 6
            (LOC540481), mRNA
          Length = 3265

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 8    acattttatatataaactta 27
            ||||||||||||||||||||
Sbjct: 2373 acattttatatataaactta 2354
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>ref|XM_878469.1| PREDICTED: Bos taurus similar to transcription factor 7-like 2,
            T-cell specific, HMG-box, transcript variant 5
            (LOC540481), mRNA
          Length = 3147

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 8    acattttatatataaactta 27
            ||||||||||||||||||||
Sbjct: 2255 acattttatatataaactta 2236
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>ref|XM_611661.2| PREDICTED: Bos taurus similar to transcription factor 7-like 2,
            T-cell specific, HMG-box, transcript variant 1
            (LOC540481), mRNA
          Length = 3280

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 8    acattttatatataaactta 27
            ||||||||||||||||||||
Sbjct: 2388 acattttatatataaactta 2369
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>gb|AC120386.12| Mus musculus chromosome 9, clone RP24-294A16, complete sequence
          Length = 207310

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 260   ggctggtgagatgccttggtgggt 283
             |||| |||||||||||||||||||
Sbjct: 47708 ggctagtgagatgccttggtgggt 47731
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>gb|AC161345.4| Mus musculus chromosome 5, clone RP23-189N6, complete sequence
          Length = 177864

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 261   gctggtgagatgccttggtgggtt 284
             |||||||||||| |||||||||||
Sbjct: 46358 gctggtgagatgacttggtgggtt 46335
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>gb|AC126459.3| Mus musculus BAC clone RP23-181A8 from chromosome 9, complete sequence
          Length = 217068

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 260   ggctggtgagatgccttggtgggt 283
             ||||||||||||| ||||||||||
Sbjct: 50170 ggctggtgagatggcttggtgggt 50193
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>gb|BC011397.1| Mus musculus transcription factor 7-like 2, T-cell specific, HMG-box,
            mRNA (cDNA clone IMAGE:3157505), containing frame-shift
            errors
          Length = 3578

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 8    acattttatatataaactta 27
            ||||||||||||||||||||
Sbjct: 3034 acattttatatataaactta 3015
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>gb|AC122339.3| Mus musculus BAC clone RP23-353L10 from chromosome 5, complete sequence
          Length = 203685

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 261    gctggtgagatgccttggtgggtt 284
              |||||||||||| |||||||||||
Sbjct: 198947 gctggtgagatgacttggtgggtt 198924
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>ref|XM_723974.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY01329)
            partial mRNA
          Length = 16299

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 68   gtgattgtaataatactgga 87
            ||||||||||||||||||||
Sbjct: 1868 gtgattgtaataatactgga 1887
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>gb|AC118695.10| Mus musculus chromosome 19, clone RP24-62C10, complete sequence
          Length = 261979

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 8      acattttatatataaactta 27
              ||||||||||||||||||||
Sbjct: 179031 acattttatatataaactta 179050
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>gb|AC146585.18| Medicago truncatula clone mth2-68o3, complete sequence
          Length = 124526

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    tataagcataaacattaatt 109
             ||||||||||||||||||||
Sbjct: 39630 tataagcataaacattaatt 39649
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>gb|AC104323.27| Mus musculus strain C57BL/6J chromosome 17 clone rp23-114o8 map 17,
             complete sequence
          Length = 202430

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 260   ggctggtgagatgccttggt 279
             ||||||||||||||||||||
Sbjct: 80494 ggctggtgagatgccttggt 80513
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>gb|AC140916.17| Medicago truncatula clone mth2-12b2, complete sequence
          Length = 133358

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    attttatatataaacttaca 29
             ||||||||||||||||||||
Sbjct: 27002 attttatatataaacttaca 27021
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>emb|AL451084.19| Human DNA sequence from clone RP11-357H24 on chromosome 10 Contains the
             3' end of the TCF7L2 gene for transcription factor 7-like
             2 (T-cell specific, HMG-box), complete sequence
          Length = 183815

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     acattttatatataaactta 27
             ||||||||||||||||||||
Sbjct: 42147 acattttatatataaactta 42128
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>emb|AL512655.17| Human DNA sequence from clone RP11-536C2 on chromosome 13, complete
             sequence
          Length = 146002

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     gtaaacattttatatataaa 23
             ||||||||||||||||||||
Sbjct: 56227 gtaaacattttatatataaa 56246
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>gb|BC052022.1| Mus musculus transcription factor 7-like 2, T-cell specific, HMG-box,
            mRNA (cDNA clone MGC:62369 IMAGE:5702449), complete cds
          Length = 3230

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 8    acattttatatataaactta 27
            ||||||||||||||||||||
Sbjct: 2684 acattttatatataaactta 2665
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>emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS767 of Debaryomyces
             hansenii
          Length = 1592360

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 235   gatgaaaatccaacttaatt 254
             ||||||||||||||||||||
Sbjct: 40465 gatgaaaatccaacttaatt 40446
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>emb|AL596111.7| Mouse DNA sequence from clone RP23-188E9 on chromosome 11, complete
              sequence
          Length = 199961

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 260    ggctggtgagatgccttggtgggt 283
              ||||||||||||||||| ||||||
Sbjct: 116658 ggctggtgagatgccttagtgggt 116681
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>gb|AC005727.3| Arabidopsis thaliana chromosome 2 clone F8N16 map mi54, complete
             sequence
          Length = 107097

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    tgtactccaaaattctatta 52
             ||||||||||||||||||||
Sbjct: 65244 tgtactccaaaattctatta 65263
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>gb|AC091867.3| Homo sapiens chromosome 5 clone CTD-2365E22, complete sequence
          Length = 98183

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     agtaaacattttatatataa 22
             ||||||||||||||||||||
Sbjct: 24378 agtaaacattttatatataa 24359
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>dbj|AK138900.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched
           library, clone:A430107L13 product:unclassifiable, full
           insert sequence
          Length = 601

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 260 ggctggtgagatgccttggtgggt 283
           ||||||||||||| ||||||||||
Sbjct: 125 ggctggtgagatggcttggtgggt 148
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>emb|BX842571.5| Zebrafish DNA sequence from clone DKEY-16G11 in linkage group 5,
             complete sequence
          Length = 145925

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 69    tgattgtaataatactggatatat 92
             ||||||| ||||||||||||||||
Sbjct: 30836 tgattgttataatactggatatat 30859
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>dbj|AK052583.1| Mus musculus 13 days embryo stomach cDNA, RIKEN full-length enriched
            library, clone:D530047A20 product:transcription factor
            7-like 2, T-cell specific, HMG-box, full insert sequence
          Length = 2766

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 8    acattttatatataaactta 27
            ||||||||||||||||||||
Sbjct: 1819 acattttatatataaactta 1800
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>gb|AF174294.1|AF174294 Gossypium arboreum (+)-delta-cadinene sythase (CAD1-C1) gene,
            complete cds
          Length = 4328

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 5    taaacattttatatataaac 24
            ||||||||||||||||||||
Sbjct: 3026 taaacattttatatataaac 3007
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>gb|AY224188.1| Medicago truncatula adenosylhomocysteinase (AHC1) gene, complete cds
          Length = 99431

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    tataagcataaacattaatt 109
             ||||||||||||||||||||
Sbjct: 21602 tataagcataaacattaatt 21583
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>dbj|AK035059.1| Mus musculus 12 days embryo embryonic body between diaphragm region
            and neck cDNA, RIKEN full-length enriched library,
            clone:9430080I21 product:transcription factor 7-like 2,
            T-cell specific, HMG-box, full insert sequence
          Length = 2914

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 8    acattttatatataaactta 27
            ||||||||||||||||||||
Sbjct: 2906 acattttatatataaactta 2887
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>dbj|AK038720.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched
            library, clone:A230056P16 product:transcription factor
            7-like 2, T-cell specific, HMG-box, full insert sequence
          Length = 3122

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 8    acattttatatataaactta 27
            ||||||||||||||||||||
Sbjct: 2599 acattttatatataaactta 2580
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>dbj|AK048536.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
            library, clone:C130070J09 product:transcription factor
            7-like 2, T-cell specific, HMG-box, full insert sequence
          Length = 2841

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 8    acattttatatataaactta 27
            ||||||||||||||||||||
Sbjct: 2319 acattttatatataaactta 2300
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>dbj|AK018098.1| Mus musculus 11 days embryo head cDNA, RIKEN full-length enriched
           library, clone:6230425N15 product:transcription factor
           4, full insert sequence
          Length = 1461

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 8   acattttatatataaactta 27
           ||||||||||||||||||||
Sbjct: 939 acattttatatataaactta 920
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>gb|AC022203.4|AC022203 Homo sapiens BAC clone RP11-490K15 from 13, complete sequence
          Length = 177088

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     gtaaacattttatatataaa 23
             ||||||||||||||||||||
Sbjct: 35637 gtaaacattttatatataaa 35618
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 124      tatatacgtatatagcatcg 143
                ||||||||||||||||||||
Sbjct: 21150714 tatatacgtatatagcatcg 21150695
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>emb|BX005026.10| Zebrafish DNA sequence from clone DKEY-11J5, complete sequence
          Length = 154034

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     aaacattttatatataaact 25
             ||||||||||||||||||||
Sbjct: 51470 aaacattttatatataaact 51489
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>emb|BX648364.1|HSM808512 Homo sapiens mRNA; cDNA DKFZp686K06191 (from clone DKFZp686K06191)
          Length = 3326

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 8    acattttatatataaactta 27
            ||||||||||||||||||||
Sbjct: 2502 acattttatatataaactta 2483
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>emb|CR847870.16| Zebrafish DNA sequence from clone DKEY-170G11 in linkage group 22,
             complete sequence
          Length = 237985

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 71    attgtaataatactggatatataa 94
             ||||||||||||||| ||||||||
Sbjct: 61956 attgtaataatactgtatatataa 61933
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>emb|AJ270778.1|HSA270778 Homo sapiens partial TCF-4 gene for T-cell transcription factor-4,
            exon 17
          Length = 3040

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 8    acattttatatataaactta 27
            ||||||||||||||||||||
Sbjct: 2767 acattttatatataaactta 2748
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>gb|AC079446.30| Mus musculus strain C57BL/6J chromosome X clone rp23-9p22, complete
              sequence
          Length = 223309

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 260    ggctggtgagatgccttggtgggt 283
              ||||||||||||| ||||||||||
Sbjct: 214131 ggctggtgagatggcttggtgggt 214154
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>emb|BX005101.8| Zebrafish DNA sequence from clone CH211-139G10 in linkage group 20,
              complete sequence
          Length = 160724

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 14     tatatataaacttacagttt 33
              ||||||||||||||||||||
Sbjct: 159107 tatatataaacttacagttt 159088
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>emb|AL672268.18| Mouse DNA sequence from clone RP23-171J18 on chromosome X, complete
             sequence
          Length = 187999

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 260   ggctggtgagatgccttggtgggt 283
             ||||||||||||| ||||||||||
Sbjct: 88415 ggctggtgagatggcttggtgggt 88438
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>emb|AL607002.3|OSJN00117 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0085H03,
             complete sequence
          Length = 132393

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   tatatacgtatatagcatcg 143
             ||||||||||||||||||||
Sbjct: 88100 tatatacgtatatagcatcg 88081
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>ref|NM_009333.2| Mus musculus transcription factor 7-like 2, T-cell specific, HMG-box
            (Tcf7l2), mRNA
          Length = 3230

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 8    acattttatatataaactta 27
            ||||||||||||||||||||
Sbjct: 2684 acattttatatataaactta 2665
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>gb|AC134246.4| Mus musculus BAC clone RP23-199B2 from 3, complete sequence
          Length = 206439

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 260   ggctggtgagatgccttggtgggt 283
             ||||||||||||| ||||||||||
Sbjct: 11091 ggctggtgagatggcttggtgggt 11068
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>gb|AC134856.3| Mus musculus BAC clone RP23-291B16 from 18, complete sequence
          Length = 210961

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 260    ggctggtgagatgccttggtgggt 283
              ||||||||||||||||| ||||||
Sbjct: 105216 ggctggtgagatgccttagtgggt 105193
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>gb|AC145168.5| Mus musculus BAC clone RP23-398K14 from 3, complete sequence
          Length = 217058

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 260    ggctggtgagatgccttggtgggt 283
              ||||||||||||| ||||||||||
Sbjct: 172089 ggctggtgagatggcttggtgggt 172066
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>emb|CT025736.6| Mouse DNA sequence from clone RP23-469A22 on chromosome 17, complete
             sequence
          Length = 168581

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     cattttatatataaacttac 28
             ||||||||||||||||||||
Sbjct: 12290 cattttatatataaacttac 12309
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>gb|J02836.1|MUSGUSB Mouse beta-glucuronidase gene, complete cds
          Length = 16449

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 261  gctggtgagatgccttggtgggtt 284
            |||||||||||| |||||||||||
Sbjct: 3432 gctggtgagatgacttggtgggtt 3409
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>emb|AL606904.12| Mouse DNA sequence from clone RP23-182D20 on chromosome 4, complete
              sequence
          Length = 172024

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 260    ggctggtgagatgccttggtgggt 283
              ||||||||||||| ||||||||||
Sbjct: 127463 ggctggtgagatggcttggtgggt 127440
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>emb|AL732480.12| Mouse DNA sequence from clone RP23-11N21 on chromosome 4, complete
             sequence
          Length = 209063

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    tgtaataatactggatatat 92
             ||||||||||||||||||||
Sbjct: 53830 tgtaataatactggatatat 53849
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>gb|AY879659.1| Theropithecus gelada Alu insertion locus Agilis_Yd_68
          Length = 598

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 1   acagtaaacattttatatataaac 24
           |||||||||||||||||| |||||
Sbjct: 493 acagtaaacattttatatgtaaac 516
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>gb|AY879658.1| Cercocebus agilis Alu insertion locus Agilis_Yd_68
          Length = 594

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 1   acagtaaacattttatatataaac 24
           |||||||||||||||||| |||||
Sbjct: 488 acagtaaacattttatatgtaaac 511
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>gb|AY879657.1| Papio cynocephalus Alu insertion locus Agilis_Yd_68
          Length = 613

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 1   acagtaaacattttatatataaac 24
           |||||||||||||||||| |||||
Sbjct: 507 acagtaaacattttatatgtaaac 530


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,288,856
Number of Sequences: 3902068
Number of extensions: 3288856
Number of successful extensions: 81133
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80982
Number of HSP's gapped (non-prelim): 151
length of query: 316
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 294
effective length of database: 17,147,199,772
effective search space: 5041276732968
effective search space used: 5041276732968
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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