| Clone Name | rbaet78d10 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X15869.1|HVNADPHP Barley mRNA for NADPH-protochlorophyllide oxidoreductase (PCR) Length = 1490 Score = 256 bits (129), Expect = 1e-65 Identities = 132/133 (99%) Strand = Plus / Minus Query: 3 aggcctgcggttttattattccaatgtttgccgaaaattgtacatcttccacacgagatc 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1477 aggcctgcggttttattattccaatgtttgccgaaaattgtacatcttccacacgagatc 1418 Query: 63 tatgcactctcgcggccactcgcaaggcctctcctgcgtaattgagctactaaaaaggcg 122 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1417 tatgcactctcgcggccactcgcaaggcctctcctgcgtaattgagcttctaaaaaggcg 1358 Query: 123 taaacatgataat 135 ||||||||||||| Sbjct: 1357 taaacatgataat 1345
>emb|X76532.1|TAPWR5PI Triticum aestivium pWR5 RNA for protochlorophyilide reductase Length = 1484 Score = 163 bits (82), Expect = 2e-37 Identities = 119/130 (91%), Gaps = 1/130 (0%) Strand = Plus / Minus Query: 6 cctgcggttttattattccaatgtttgccgaaaattgtacatcttccacacgagatctat 65 |||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||| Sbjct: 1458 cctgcggttttattattc-atggttcgccgaaaattgtacatcttccacacgagatctac 1400 Query: 66 gcactctcgcggccactcgcaaggcctctcctgcgtaattgagctactaaaaaggcgtaa 125 |||||||||| | |||||||||||||||||| ||||||||||| | |||||||||||||| Sbjct: 1399 gcactctcgccgacactcgcaaggcctctcccgcgtaattgagtttctaaaaaggcgtaa 1340 Query: 126 acatgataat 135 | |||||||| Sbjct: 1339 aaatgataat 1330
>emb|X17067.1|ASPCR Avena sativa mRNA for protochlorophyllide reductase Length = 1146 Score = 117 bits (59), Expect = 9e-24 Identities = 88/95 (92%), Gaps = 2/95 (2%) Strand = Plus / Minus Query: 3 aggcctgcggttttattattccaatgttt-gccgaaaattgtacatcttccacacgagat 61 |||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||| Sbjct: 1135 aggcctgcggttttattattccaatggttcgccgaaaattgtacatcttccacccgagat 1076 Query: 62 ctatgcactctcgcggccactcgc-aaggcctctc 95 ||||| |||| ||||| ||||||| |||||||||| Sbjct: 1075 ctatgtactcccgcggacactcgcaaaggcctctc 1041
>gb|AC124417.5| Mus musculus BAC clone RP24-313G11 from chromosome 18, complete sequence Length = 181811 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 aaattgtacatcttccacac 56 |||||||||||||||||||| Sbjct: 24311 aaattgtacatcttccacac 24292
>emb|AL928676.13| Zebrafish DNA sequence from clone DKEY-121K17, complete sequence Length = 176196 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ttttattattccaatgtttg 32 |||||||||||||||||||| Sbjct: 105180 ttttattattccaatgtttg 105199
>ref|XM_968605.1| PREDICTED: Tribolium castaneum similar to Cytochrome P450 4c3 (CYPIVC3) (LOC662514), mRNA Length = 1488 Score = 38.2 bits (19), Expect = 6.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 18 ttattccaatgtttgccgaaaat 40 ||||||| ||||||||||||||| Sbjct: 476 ttattcccatgtttgccgaaaat 454
>emb|BX248104.5| Zebrafish DNA sequence from clone DKEY-77P13 in linkage group 20, complete sequence Length = 139851 Score = 38.2 bits (19), Expect = 6.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 13 ttttattattccaatgttt 31 ||||||||||||||||||| Sbjct: 92684 ttttattattccaatgttt 92702 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 876,630 Number of Sequences: 3902068 Number of extensions: 876630 Number of successful extensions: 56094 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 56084 Number of HSP's gapped (non-prelim): 8 length of query: 135 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 114 effective length of database: 17,151,101,840 effective search space: 1955225609760 effective search space used: 1955225609760 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)