ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet78d06 |
|---|---|
| Clone Library Name | barley_pub |
>RK14_TOBAC (P06382) Chloroplast 50S ribosomal protein L14| Length = 122 Score = 35.4 bits (80), Expect = 0.044 Identities = 17/17 (100%), Positives = 17/17 (100%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 LRELNFTKIVSLAPEVL Sbjct: 106 LRELNFTKIVSLAPEVL 122
>RK14_ORYSA (P12137) Chloroplast 50S ribosomal protein L14| Length = 123 Score = 35.4 bits (80), Expect = 0.044 Identities = 17/17 (100%), Positives = 17/17 (100%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 LRELNFTKIVSLAPEVL Sbjct: 107 LRELNFTKIVSLAPEVL 123
>RK14_ORYNI (Q6END7) Chloroplast 50S ribosomal protein L14| Length = 123 Score = 35.4 bits (80), Expect = 0.044 Identities = 17/17 (100%), Positives = 17/17 (100%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 LRELNFTKIVSLAPEVL Sbjct: 107 LRELNFTKIVSLAPEVL 123
>RK14_PINTH (P41633) Chloroplast 50S ribosomal protein L14| Length = 122 Score = 34.3 bits (77), Expect = 0.098 Identities = 16/17 (94%), Positives = 17/17 (100%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 LR+LNFTKIVSLAPEVL Sbjct: 106 LRQLNFTKIVSLAPEVL 122
>RK14_ARATH (P56792) Chloroplast 50S ribosomal protein L14| Length = 122 Score = 34.3 bits (77), Expect = 0.098 Identities = 16/17 (94%), Positives = 17/17 (100%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 LR+LNFTKIVSLAPEVL Sbjct: 106 LRQLNFTKIVSLAPEVL 122
>RK14_SACOF (Q6ENS7) Chloroplast 50S ribosomal protein L14| Length = 123 Score = 34.3 bits (77), Expect = 0.098 Identities = 16/17 (94%), Positives = 17/17 (100%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 LRELN+TKIVSLAPEVL Sbjct: 107 LRELNYTKIVSLAPEVL 123
>RK14_SACHY (Q6L3G2) Chloroplast 50S ribosomal protein L14| Length = 123 Score = 34.3 bits (77), Expect = 0.098 Identities = 16/17 (94%), Positives = 17/17 (100%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 LRELN+TKIVSLAPEVL Sbjct: 107 LRELNYTKIVSLAPEVL 123
>RK14_OENAM (P42340) Chloroplast 50S ribosomal protein L14 (Fragments)| Length = 74 Score = 33.5 bits (75), Expect = 0.17 Identities = 16/17 (94%), Positives = 17/17 (100%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 LREL+FTKIVSLAPEVL Sbjct: 58 LRELSFTKIVSLAPEVL 74
>RK14_MARPO (P06381) Chloroplast 50S ribosomal protein L14| Length = 122 Score = 33.1 bits (74), Expect = 0.22 Identities = 16/17 (94%), Positives = 16/17 (94%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 LRE NFTKIVSLAPEVL Sbjct: 106 LRESNFTKIVSLAPEVL 122
>RK14_MAIZE (P08529) Chloroplast 50S ribosomal protein L14| Length = 123 Score = 33.1 bits (74), Expect = 0.22 Identities = 16/17 (94%), Positives = 16/17 (94%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 LRELN TKIVSLAPEVL Sbjct: 107 LRELNLTKIVSLAPEVL 123
>RK14_WHEAT (Q95H51) Chloroplast 50S ribosomal protein L14| Length = 123 Score = 32.7 bits (73), Expect = 0.28 Identities = 16/17 (94%), Positives = 16/17 (94%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 LR LNFTKIVSLAPEVL Sbjct: 107 LRGLNFTKIVSLAPEVL 123
>RK14_LOTJA (Q9BBQ0) Chloroplast 50S ribosomal protein L14| Length = 122 Score = 32.3 bits (72), Expect = 0.37 Identities = 14/17 (82%), Positives = 16/17 (94%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 LR+ NFTKIVSLAPE+L Sbjct: 106 LRQFNFTKIVSLAPEIL 122
>RL14_SYNY3 (P73310) 50S ribosomal protein L14| Length = 122 Score = 32.0 bits (71), Expect = 0.49 Identities = 15/17 (88%), Positives = 16/17 (94%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 LR+ NFTKIVSLAPEVL Sbjct: 106 LRDKNFTKIVSLAPEVL 122
>RK14_MESVI (Q9MUU4) Chloroplast 50S ribosomal protein L14| Length = 122 Score = 32.0 bits (71), Expect = 0.49 Identities = 15/17 (88%), Positives = 16/17 (94%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 LR+ NFTKIVSLAPEVL Sbjct: 106 LRDRNFTKIVSLAPEVL 122
>RK14_CHLRE (P11094) Chloroplast 50S ribosomal protein L14| Length = 122 Score = 32.0 bits (71), Expect = 0.49 Identities = 15/17 (88%), Positives = 16/17 (94%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 LR+ NFTKIVSLAPEVL Sbjct: 106 LRDKNFTKIVSLAPEVL 122
>RL14_TREPA (O83229) 50S ribosomal protein L14| Length = 122 Score = 31.6 bits (70), Expect = 0.63 Identities = 14/17 (82%), Positives = 17/17 (100%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 LR+++FTKIVSLAPEVL Sbjct: 106 LRDMDFTKIVSLAPEVL 122
>RK14_CYAPA (P23405) Cyanelle 50S ribosomal protein L14| Length = 122 Score = 31.6 bits (70), Expect = 0.63 Identities = 14/17 (82%), Positives = 16/17 (94%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 LR+ NFTKI+SLAPEVL Sbjct: 106 LRDKNFTKIISLAPEVL 122
>RL14_SYNP6 (O24699) 50S ribosomal protein L14| Length = 121 Score = 31.2 bits (69), Expect = 0.83 Identities = 14/17 (82%), Positives = 16/17 (94%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 LR+ NFTKIVSLAPEV+ Sbjct: 105 LRDRNFTKIVSLAPEVI 121
>RK14_CHLVU (P56363) Chloroplast 50S ribosomal protein L14| Length = 122 Score = 30.8 bits (68), Expect = 1.1 Identities = 14/17 (82%), Positives = 16/17 (94%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 LR+ NFTKI+SLAPEVL Sbjct: 106 LRDGNFTKIISLAPEVL 122
>RL14_STAS1 (Q49ZF8) 50S ribosomal protein L14| Length = 122 Score = 30.0 bits (66), Expect = 1.8 Identities = 15/17 (88%), Positives = 15/17 (88%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 LRE NF KIVSLAPEVL Sbjct: 106 LREGNFMKIVSLAPEVL 122
>RL14_STAHJ (Q4L8A4) 50S ribosomal protein L14| Length = 122 Score = 30.0 bits (66), Expect = 1.8 Identities = 15/17 (88%), Positives = 15/17 (88%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 LRE NF KIVSLAPEVL Sbjct: 106 LREGNFMKIVSLAPEVL 122
>RL14_STAES (Q8CRG9) 50S ribosomal protein L14| Length = 122 Score = 30.0 bits (66), Expect = 1.8 Identities = 15/17 (88%), Positives = 15/17 (88%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 LRE NF KIVSLAPEVL Sbjct: 106 LREGNFMKIVSLAPEVL 122
>RL14_STAEQ (Q5HM09) 50S ribosomal protein L14| Length = 122 Score = 30.0 bits (66), Expect = 1.8 Identities = 15/17 (88%), Positives = 15/17 (88%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 LRE NF KIVSLAPEVL Sbjct: 106 LREGNFMKIVSLAPEVL 122
>RL14_STAAW (Q7A081) 50S ribosomal protein L14| Length = 122 Score = 30.0 bits (66), Expect = 1.8 Identities = 15/17 (88%), Positives = 15/17 (88%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 LRE NF KIVSLAPEVL Sbjct: 106 LREGNFMKIVSLAPEVL 122
>RL14_STAAS (Q6G781) 50S ribosomal protein L14| Length = 122 Score = 30.0 bits (66), Expect = 1.8 Identities = 15/17 (88%), Positives = 15/17 (88%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 LRE NF KIVSLAPEVL Sbjct: 106 LREGNFMKIVSLAPEVL 122
>RL14_STAAR (Q6GEJ3) 50S ribosomal protein L14| Length = 122 Score = 30.0 bits (66), Expect = 1.8 Identities = 15/17 (88%), Positives = 15/17 (88%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 LRE NF KIVSLAPEVL Sbjct: 106 LREGNFMKIVSLAPEVL 122
>RL14_STAAN (Q7A463) 50S ribosomal protein L14| Length = 122 Score = 30.0 bits (66), Expect = 1.8 Identities = 15/17 (88%), Positives = 15/17 (88%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 LRE NF KIVSLAPEVL Sbjct: 106 LREGNFMKIVSLAPEVL 122
>RL14_STAAM (Q99S31) 50S ribosomal protein L14| Length = 122 Score = 30.0 bits (66), Expect = 1.8 Identities = 15/17 (88%), Positives = 15/17 (88%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 LRE NF KIVSLAPEVL Sbjct: 106 LREGNFMKIVSLAPEVL 122
>RL14_STAAC (Q5HDW8) 50S ribosomal protein L14| Length = 122 Score = 30.0 bits (66), Expect = 1.8 Identities = 15/17 (88%), Positives = 15/17 (88%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 LRE NF KIVSLAPEVL Sbjct: 106 LREGNFMKIVSLAPEVL 122
>RK14_ADICA (Q85FI6) Chloroplast 50S ribosomal protein L14| Length = 122 Score = 30.0 bits (66), Expect = 1.8 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 LRE NF ++VSLAPEVL Sbjct: 106 LRECNFARVVSLAPEVL 122
>RK14_GUITH (O46904) Chloroplast 50S ribosomal protein L14| Length = 121 Score = 30.0 bits (66), Expect = 1.8 Identities = 14/17 (82%), Positives = 16/17 (94%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 LR+ +FTKIVSLAPEVL Sbjct: 105 LRDKDFTKIVSLAPEVL 121
>RL14_BACSU (P12875) 50S ribosomal protein L14| Length = 122 Score = 29.6 bits (65), Expect = 2.4 Identities = 14/17 (82%), Positives = 15/17 (88%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 LRE NF KIVSLAPEV+ Sbjct: 106 LRENNFMKIVSLAPEVI 122
>RK14_ODOSI (P49552) Chloroplast 50S ribosomal protein L14| Length = 121 Score = 29.6 bits (65), Expect = 2.4 Identities = 13/17 (76%), Positives = 16/17 (94%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 +R+ NF+KIVSLAPEVL Sbjct: 105 IRDKNFSKIVSLAPEVL 121
>RK14_PORPU (P51304) Chloroplast 50S ribosomal protein L14| Length = 122 Score = 28.9 bits (63), Expect = 4.1 Identities = 12/17 (70%), Positives = 16/17 (94%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 LR+ NF+KI+SLAPEV+ Sbjct: 106 LRDKNFSKIISLAPEVV 122
>RL14_THETH (P60558) 50S ribosomal protein L14| Length = 122 Score = 28.5 bits (62), Expect = 5.4 Identities = 14/17 (82%), Positives = 14/17 (82%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 LRE F KIVSLAPEVL Sbjct: 106 LREKGFMKIVSLAPEVL 122
>RL14_THET8 (Q5SHP8) 50S ribosomal protein L14| Length = 122 Score = 28.5 bits (62), Expect = 5.4 Identities = 14/17 (82%), Positives = 14/17 (82%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 LRE F KIVSLAPEVL Sbjct: 106 LREKGFMKIVSLAPEVL 122
>RL14_THEAQ (P60557) 50S ribosomal protein L14| Length = 122 Score = 28.5 bits (62), Expect = 5.4 Identities = 14/17 (82%), Positives = 14/17 (82%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 LRE F KIVSLAPEVL Sbjct: 106 LREKGFMKIVSLAPEVL 122
>RL14_MYCTU (P66069) 50S ribosomal protein L14| Length = 122 Score = 28.1 bits (61), Expect = 7.0 Identities = 13/17 (76%), Positives = 14/17 (82%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 LRE F KI+SLAPEVL Sbjct: 106 LREKRFMKIISLAPEVL 122
>RL14_MYCLE (O32993) 50S ribosomal protein L14| Length = 122 Score = 28.1 bits (61), Expect = 7.0 Identities = 13/17 (76%), Positives = 14/17 (82%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 LRE F KI+SLAPEVL Sbjct: 106 LREKRFMKIISLAPEVL 122
>RL14_MYCBO (P66070) 50S ribosomal protein L14| Length = 122 Score = 28.1 bits (61), Expect = 7.0 Identities = 13/17 (76%), Positives = 14/17 (82%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 LRE F KI+SLAPEVL Sbjct: 106 LREKRFMKIISLAPEVL 122
>RL14_STRR6 (P0A474) 50S ribosomal protein L14| Length = 122 Score = 27.7 bits (60), Expect = 9.2 Identities = 14/17 (82%), Positives = 14/17 (82%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 LRE F KIVSLAPEVL Sbjct: 106 LREGGFMKIVSLAPEVL 122
>RL14_STRPN (P0A473) 50S ribosomal protein L14| Length = 122 Score = 27.7 bits (60), Expect = 9.2 Identities = 14/17 (82%), Positives = 14/17 (82%) Frame = -2 Query: 138 LRELNFTKIVSLAPEVL 88 LRE F KIVSLAPEVL Sbjct: 106 LREGGFMKIVSLAPEVL 122 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,357,179 Number of Sequences: 219361 Number of extensions: 131732 Number of successful extensions: 247 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 247 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 247 length of database: 80,573,946 effective HSP length: 21 effective length of database: 75,967,365 effective search space used: 1823216760 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
