>gb|AC006539.1|AC006539 Homo sapiens chromosome 19, BAC 39498 (CIT-B-26L23), complete sequence
          Length = 114739

 Score = 46.1 bits (23), Expect = 0.025
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 63     atcgacaggccaaaatttcaaccataa 89
              ||||||||||||||||||| |||||||
Sbjct: 103786 atcgacaggccaaaatttccaccataa 103760

>gb|AC023886.7| Homo sapiens BAC clone RP11-402J6 from 4, complete sequence
          Length = 179697

 Score = 44.1 bits (22), Expect = 0.100
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1     gtccaatgaaatgaactatatc 22
             ||||||||||||||||||||||
Sbjct: 74946 gtccaatgaaatgaactatatc 74967

>emb|BX321906.30| Zebrafish DNA sequence from clone DKEYP-45E9 in linkage group 10,
             complete sequence
          Length = 164266

 Score = 42.1 bits (21), Expect = 0.39
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 91    ctactgtacaatacacaatttaagt 115
             ||||||||||| |||||||||||||
Sbjct: 31676 ctactgtacaagacacaatttaagt 31652

>emb|BX640592.10| Zebrafish DNA sequence from clone CH211-132E23 in linkage group 4,
              complete sequence
          Length = 186123

 Score = 42.1 bits (21), Expect = 0.39
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 91     ctactgtacaatacacaatttaagt 115
              ||||||||||| |||||||||||||
Sbjct: 177513 ctactgtacaagacacaatttaagt 177537

>gb|AC007045.5| Arabidopsis thaliana chromosome 2 clone F23M2 map mi421, complete
             sequence
          Length = 117945

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 21    tcaaaacacatcacagtaaattgt 44
             |||| |||||||||||||||||||
Sbjct: 23975 tcaatacacatcacagtaaattgt 23952

>emb|AL935034.18| Zebrafish DNA sequence from clone CH211-160A3 in linkage group 12,
             complete sequence
          Length = 171213

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    aatttcaaccataatctact 95
             ||||||||||||||||||||
Sbjct: 88093 aatttcaaccataatctact 88112

>emb|BX005161.6| Zebrafish DNA sequence from clone CH211-168N16 in linkage group 20,
             complete sequence
          Length = 150884

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    tatcaaaacacatcacagta 38
             ||||||||||||||||||||
Sbjct: 84952 tatcaaaacacatcacagta 84933

>gb|AC006270.1|AC006270 Homo sapiens chromosome 17, clone hRPK.556_O_9, complete sequence
          Length = 179929

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    caaaacacatcacagtaaat 41
             ||||||||||||||||||||
Sbjct: 49246 caaaacacatcacagtaaat 49227

>gb|AC102311.10| Mus musculus chromosome 1, clone RP24-426M1, complete sequence
          Length = 175758

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 97    tacaatacacaatttaagt 115
             |||||||||||||||||||
Sbjct: 54175 tacaatacacaatttaagt 54193

>gb|AC101795.9| Mus musculus chromosome 5, clone RP24-201P24, complete sequence
          Length = 170688

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 66     gacaggccaaaatttcaaccata 88
              ||||| |||||||||||||||||
Sbjct: 125455 gacagaccaaaatttcaaccata 125477

>gb|U70845.1| Caenorhabditis elegans cosmid F22H10, complete sequence
          Length = 28523

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 12   tgaactatatcaaaacacatcac 34
            |||||||| ||||||||||||||
Sbjct: 3437 tgaactatttcaaaacacatcac 3459

>gb|AC101852.7| Mus musculus chromosome 1, clone RP23-279P3, complete sequence
          Length = 185975

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 14    aactatatcaaaacacatc 32
             |||||||||||||||||||
Sbjct: 70887 aactatatcaaaacacatc 70869

>gb|AC156620.10| Mus musculus chromosome 5, clone RP23-80G18, complete sequence
          Length = 248320

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 9      aaatgaactatatcaaaac 27
              |||||||||||||||||||
Sbjct: 141890 aaatgaactatatcaaaac 141908

>gb|AC116110.7| Mus musculus chromosome 6, clone RP23-19B12, complete sequence
          Length = 182667

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 71     gccaaaatttcaaccataa 89
              |||||||||||||||||||
Sbjct: 104100 gccaaaatttcaaccataa 104082

>gb|AC161535.5| Mus musculus chromosome 5, clone RP23-26J13, complete sequence
          Length = 209259

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 66    gacaggccaaaatttcaaccata 88
             ||||| |||||||||||||||||
Sbjct: 26693 gacagaccaaaatttcaaccata 26715

>emb|CR846094.7| Zebrafish DNA sequence from clone CH211-264F16 in linkage group 24,
             complete sequence
          Length = 175626

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 91    ctactgtacaatacacaatttaa 113
             ||||||||||| |||||||||||
Sbjct: 38950 ctactgtacaaaacacaatttaa 38972

>emb|AL158088.6| Human DNA sequence from clone RP5-1003H17 on chromosome 20 Contains
             part of the gene for a novel protein (LOC284776), complete
             sequence
          Length = 52171

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 4     caatgaaatgaactatatcaaaacaca 30
             ||||||||| || ||||||||||||||
Sbjct: 44320 caatgaaataaattatatcaaaacaca 44294

>emb|AL031769.1|HS194O8 Human DNA sequence from clone RP1-194O8 on chromosome 6q24.1-25.3,
              complete sequence
          Length = 126839

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 16     ctatatcaaaacacatcac 34
              |||||||||||||||||||
Sbjct: 111610 ctatatcaaaacacatcac 111592

>emb|BX664015.1| Serratia marcescens plasmid R478
          Length = 274762

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 69     aggccaaaatttcaaccat 87
              |||||||||||||||||||
Sbjct: 186262 aggccaaaatttcaaccat 186244

>gb|AC158962.4| Mus musculus chromosome 1, clone RP23-443N21, complete sequence
          Length = 180337

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 14    aactatatcaaaacacatc 32
             |||||||||||||||||||
Sbjct: 88898 aactatatcaaaacacatc 88916

>emb|BX323467.8| Zebrafish DNA sequence from clone DKEY-48N15, complete sequence
          Length = 116326

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 9      aaatgaactatatcaaaacacat 31
              ||||||||| |||||||||||||
Sbjct: 113705 aaatgaactgtatcaaaacacat 113683

>gb|AC142396.25| Medicago truncatula clone mth2-6g9, complete sequence
          Length = 106058

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 80    tcaaccataatctactgta 98
             |||||||||||||||||||
Sbjct: 66005 tcaaccataatctactgta 65987

>gb|AC079096.4| Homo sapiens chromosome 18, clone RP11-75N4, complete sequence
          Length = 119927

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 67   acaggccaaaatttcaaccataa 89
            ||||||||||||||| |||||||
Sbjct: 1932 acaggccaaaatttccaccataa 1954

>gb|AC021549.9| Homo sapiens chromosome 18, clone RP11-650P15, complete sequence
          Length = 183066

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 67    acaggccaaaatttcaaccataa 89
             ||||||||||||||| |||||||
Sbjct: 14616 acaggccaaaatttccaccataa 14594

>gb|AC104821.4| Homo sapiens BAC clone RP11-745L13 from 4, complete sequence
          Length = 93879

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 22    caaaacacatcacagtaaa 40
             |||||||||||||||||||
Sbjct: 15331 caaaacacatcacagtaaa 15313

>gb|AC011841.7| Homo sapiens chromosome 17, clone RP11-272E10, complete sequence
          Length = 174588

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 67     acaggccaaaatttcaaccataa 89
              ||||||||||||||| |||||||
Sbjct: 132241 acaggccaaaatttccaccataa 132263

>ref|XM_937828.1| PREDICTED: Homo sapiens similar to CG32372-PA (LOC648745), mRNA
          Length = 1117

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 67   acaggccaaaatttcaaccataa 89
            ||||||||||||||| |||||||
Sbjct: 1045 acaggccaaaatttccaccataa 1067

>gb|AC008554.8| Homo sapiens chromosome 19 clone CTC-513N18, complete sequence
          Length = 166873

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 67    acaggccaaaatttcaaccataa 89
             ||||||||||||||| |||||||
Sbjct: 44988 acaggccaaaatttccaccataa 45010

>gb|AC007630.4|AC007630 Homo sapiens chromosome 20 clone P1-7739, complete sequence
          Length = 169494

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 4      caatgaaatgaactatatcaaaacaca 30
              ||||||||| || ||||||||||||||
Sbjct: 158942 caatgaaataaattatatcaaaacaca 158916

>gb|AC023855.15| Homo sapiens chromosome 17, clone RP11-546M21, complete sequence
          Length = 146219

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 67     acaggccaaaatttcaaccataa 89
              ||||||||||||||| |||||||
Sbjct: 114095 acaggccaaaatttccaccataa 114117

>gb|AC062016.5| Homo sapiens BAC clone RP11-59P4 from 2, complete sequence
          Length = 187799

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 67    acaggccaaaatttcaaccataa 89
             ||||||||||||||| |||||||
Sbjct: 30788 acaggccaaaatttccaccataa 30810

>gb|AC004150.8|AC004150 Homo sapiens chromosome 17, clone hRPC.971_F_3, complete sequence
          Length = 120766

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 67    acaggccaaaatttcaaccataa 89
             ||||||||||||||| |||||||
Sbjct: 98876 acaggccaaaatttccaccataa 98898

>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome
          Length = 2902619

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 9       aaatgaactatatcaaaacacat 31
               |||||| ||||||||||||||||
Sbjct: 1200491 aaatgatctatatcaaaacacat 1200513

>dbj|AP002812.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-91P24, complete
             sequences
          Length = 169250

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 21    tcaaaacacatcacagtaa 39
             |||||||||||||||||||
Sbjct: 19671 tcaaaacacatcacagtaa 19689

>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome
          Length = 2742531

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 9       aaatgaactatatcaaaacacat 31
               |||||| ||||||||||||||||
Sbjct: 1125958 aaatgacctatatcaaaacacat 1125980

>gb|AC148456.2| Xenopus tropicalis clone CH216-168B18, complete sequence
          Length = 145394

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 29/31 (93%), Gaps = 1/31 (3%)
 Strand = Plus / Plus

                                            
Query: 72    ccaaaatttcaaccataatctactgtacaat 102
             |||||||||||| ||||||||| ||||||||
Sbjct: 14854 ccaaaatttcaa-cataatctaatgtacaat 14883


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,199,146
Number of Sequences: 3902068
Number of extensions: 1199146
Number of successful extensions: 78945
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 78847
Number of HSP's gapped (non-prelim): 100
length of query: 131
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 110
effective length of database: 17,151,101,840
effective search space: 1886621202400
effective search space used: 1886621202400
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)