ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet78a02 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 486 bits (245), Expect = e-134 Identities = 251/253 (99%) Strand = Plus / Plus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119326 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 119385 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119386 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 119445 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119446 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 119505 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119506 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 119565 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 119566 ccactgggggttc 119578 Score = 486 bits (245), Expect = e-134 Identities = 251/253 (99%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95568 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 95509 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95508 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 95449 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95448 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 95389 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95388 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 95329 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 95328 ccactgggggttc 95316
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 478 bits (241), Expect = e-132 Identities = 250/253 (98%) Strand = Plus / Plus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118107 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 118166 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 118167 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 118226 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118227 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 118286 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118287 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 118346 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 118347 ccactgggggttc 118359
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 478 bits (241), Expect = e-132 Identities = 250/253 (98%) Strand = Plus / Plus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119191 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 119250 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119251 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 119310 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119311 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 119370 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119371 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 119430 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 119431 ccactgggggttc 119443 Score = 478 bits (241), Expect = e-132 Identities = 250/253 (98%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95965 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 95906 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95905 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 95846 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95845 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 95786 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95785 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 95726 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 95725 ccactgggggttc 95713
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 478 bits (241), Expect = e-132 Identities = 250/253 (98%) Strand = Plus / Plus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119191 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 119250 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119251 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 119310 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119311 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 119370 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119371 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 119430 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 119431 ccactgggggttc 119443 Score = 478 bits (241), Expect = e-132 Identities = 250/253 (98%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95965 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 95906 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95905 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 95846 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95845 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 95786 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95785 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 95726 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 95725 ccactgggggttc 95713
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 478 bits (241), Expect = e-132 Identities = 250/253 (98%) Strand = Plus / Plus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119140 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 119199 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119200 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 119259 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119260 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 119319 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119320 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 119379 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 119380 ccactgggggttc 119392 Score = 478 bits (241), Expect = e-132 Identities = 250/253 (98%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95910 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 95851 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95850 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 95791 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95790 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 95731 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95730 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 95671 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 95670 ccactgggggttc 95658
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 478 bits (241), Expect = e-132 Identities = 250/253 (98%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508543 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 31508484 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 31508483 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 31508424 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508423 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 31508364 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508363 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 31508304 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 31508303 ccactgggggttc 31508291
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 478 bits (241), Expect = e-132 Identities = 250/253 (98%) Strand = Plus / Plus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84053 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 84112 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 84113 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 84172 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84173 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 84232 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84233 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 84292 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 84293 ccactgggggttc 84305
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 478 bits (241), Expect = e-132 Identities = 250/253 (98%) Strand = Plus / Plus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119160 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 119219 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119220 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 119279 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119280 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 119339 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119340 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 119399 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 119400 ccactgggggttc 119412 Score = 478 bits (241), Expect = e-132 Identities = 250/253 (98%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95958 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 95899 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95898 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 95839 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95838 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 95779 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95778 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 95719 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 95718 ccactgggggttc 95706
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 478 bits (241), Expect = e-132 Identities = 250/253 (98%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14732 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 14673 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 14672 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 14613 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14612 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 14553 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14552 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 14493 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 14492 ccactgggggttc 14480 Score = 454 bits (229), Expect = e-125 Identities = 248/253 (98%), Gaps = 1/253 (0%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 123006 tgcttagtttcatccaagcttcatcctggtcatggatagatcacctag-ttcgggtccat 122948 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 122947 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 122888 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122887 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 122828 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122827 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 122768 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 122767 ccactgggggttc 122755
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 478 bits (241), Expect = e-132 Identities = 250/253 (98%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141540 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 141481 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 141480 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 141421 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141420 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 141361 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141360 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 141301 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 141300 ccactgggggttc 141288
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 478 bits (241), Expect = e-132 Identities = 250/253 (98%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94136 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 94077 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 94076 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 94017 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94016 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 93957 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93956 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 93897 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 93896 ccactgggggttc 93884
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 478 bits (241), Expect = e-132 Identities = 250/253 (98%) Strand = Plus / Plus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57879 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 57938 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 57939 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 57998 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57999 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 58058 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58059 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 58118 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 58119 ccactgggggttc 58131
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 478 bits (241), Expect = e-132 Identities = 250/253 (98%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28200 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 28141 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 28140 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 28081 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28080 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 28021 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28020 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 27961 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 27960 ccactgggggttc 27948
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 478 bits (241), Expect = e-132 Identities = 250/253 (98%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268892 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 9268833 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9268832 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 9268773 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268772 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 9268713 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268712 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 9268653 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 9268652 ccactgggggttc 9268640 Score = 478 bits (241), Expect = e-132 Identities = 250/253 (98%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056806 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 9056747 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9056746 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 9056687 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056686 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 9056627 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056626 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 9056567 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 9056566 ccactgggggttc 9056554 Score = 470 bits (237), Expect = e-129 Identities = 249/253 (98%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 9228392 tgcttagtttcatccaagcttcatcctggtcatggatagatcacctaggttcgggtccat 9228333 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9228332 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 9228273 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228272 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 9228213 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228212 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 9228153 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 9228152 ccactgggggttc 9228140 Score = 454 bits (229), Expect = e-125 Identities = 248/253 (98%), Gaps = 1/253 (0%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 9164980 tgcttagtttcatccaagcttcatcctggtcatggatagatcacctag-ttcgggtccat 9164922 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9164921 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 9164862 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164861 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 9164802 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164801 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 9164742 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 9164741 ccactgggggttc 9164729 Score = 111 bits (56), Expect = 1e-21 Identities = 62/64 (96%) Strand = Plus / Plus Query: 263 cccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccactgggg 322 ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 25171408 cccctaccactgcttgggagctcagcacggtttcatgttctatttcactacccactgggg 25171467 Query: 323 gttc 326 |||| Sbjct: 25171468 gttc 25171471
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 478 bits (241), Expect = e-132 Identities = 250/253 (98%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938877 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 19938818 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19938817 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 19938758 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938757 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 19938698 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938697 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 19938638 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 19938637 ccactgggggttc 19938625 Score = 478 bits (241), Expect = e-132 Identities = 250/253 (98%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387744 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 10387685 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10387684 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 10387625 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387624 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 10387565 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387564 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 10387505 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 10387504 ccactgggggttc 10387492 Score = 478 bits (241), Expect = e-132 Identities = 250/253 (98%) Strand = Plus / Plus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276554 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 10276613 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10276614 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 10276673 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276674 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 10276733 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276734 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 10276793 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 10276794 ccactgggggttc 10276806
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 478 bits (241), Expect = e-132 Identities = 250/253 (98%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599059 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 31599000 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 31598999 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 31598940 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598939 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 31598880 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598879 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 31598820 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 31598819 ccactgggggttc 31598807
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 478 bits (241), Expect = e-132 Identities = 250/253 (98%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526375 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 33526316 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 33526315 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 33526256 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526255 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 33526196 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526195 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 33526136 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 33526135 ccactgggggttc 33526123 Score = 285 bits (144), Expect = 4e-74 Identities = 153/156 (98%) Strand = Plus / Plus Query: 171 tacggctccggtgggttccgttcccttaaccaagccactgcctatgagtcgccggctcat 230 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16677926 tacggctccggtgggttccgttcccttaaccaagccactgcctatgagtcgccggctcat 16677985 Query: 231 tcttcaacaggcacgcggtcagagatcacttccccctcccactgcttgggagctcagcac 290 ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| Sbjct: 16677986 tcttcaacaggcacgcggtcagagatcactttcccctcccactggttgggagctcagcac 16678045 Query: 291 ggtttcacgttctatttcactacccactgggggttc 326 ||||||||||||||||||| |||||||||||||||| Sbjct: 16678046 ggtttcacgttctatttcattacccactgggggttc 16678081 Score = 174 bits (88), Expect = 1e-40 Identities = 100/104 (96%) Strand = Plus / Plus Query: 223 cggctcattcttcaacaggcacgcggtcagagatcacttccccctcccactgcttgggag 282 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 32744663 cggctcattcttcaacaggcacgcggtcagagatcactttcccctcccactgcttgggag 32744722 Query: 283 ctcagcacggtttcacgttctatttcactacccactgggggttc 326 |||||||| |||||||||||||||||||||||| || ||||||| Sbjct: 32744723 ctcagcactgtttcacgttctatttcactaccccctaggggttc 32744766
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 478 bits (241), Expect = e-132 Identities = 250/253 (98%) Strand = Plus / Plus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47166 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 47225 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 47226 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 47285 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47286 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 47345 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47346 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 47405 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 47406 ccactgggggttc 47418
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 478 bits (241), Expect = e-132 Identities = 250/253 (98%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71572 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 71513 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 71512 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 71453 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71452 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 71393 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71392 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 71333 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 71332 ccactgggggttc 71320
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 478 bits (241), Expect = e-132 Identities = 250/253 (98%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 536 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 477 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 476 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 417 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 357 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 356 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 297 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 296 ccactgggggttc 284
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 478 bits (241), Expect = e-132 Identities = 250/253 (98%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 344 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 285 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 284 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 225 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 224 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 165 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 105 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 104 ccactgggggttc 92
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 478 bits (241), Expect = e-132 Identities = 250/253 (98%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 744 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 685 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 684 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 625 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 624 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 565 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 564 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 505 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 504 ccactgggggttc 492
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 478 bits (241), Expect = e-132 Identities = 250/253 (98%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 539 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 480 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 479 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 420 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 419 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 360 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 359 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 300 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 299 ccactgggggttc 287
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 478 bits (241), Expect = e-132 Identities = 250/253 (98%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 651 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 592 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 591 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 532 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 531 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 472 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 471 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 412 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 411 ccactgggggttc 399
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 478 bits (241), Expect = e-132 Identities = 250/253 (98%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 351 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 350 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 291 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 290 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 231 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 230 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 171 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 170 ccactgggggttc 158
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 478 bits (241), Expect = e-132 Identities = 250/253 (98%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 482 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 481 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 422 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 362 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 302 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 301 ccactgggggttc 289
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 478 bits (241), Expect = e-132 Identities = 250/253 (98%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 539 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 480 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 479 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 420 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 419 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 360 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 359 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 300 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 299 ccactgggggttc 287
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 478 bits (241), Expect = e-132 Identities = 250/253 (98%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 482 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 481 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 422 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 362 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 302 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 301 ccactgggggttc 289
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 478 bits (241), Expect = e-132 Identities = 250/253 (98%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950153 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 19950094 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19950093 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 19950034 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950033 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 19949974 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949973 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 19949914 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 19949913 ccactgggggttc 19949901 Score = 478 bits (241), Expect = e-132 Identities = 250/253 (98%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393783 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 10393724 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10393723 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 10393664 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393663 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 10393604 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393603 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 10393544 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 10393543 ccactgggggttc 10393531 Score = 478 bits (241), Expect = e-132 Identities = 250/253 (98%) Strand = Plus / Plus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282593 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 10282652 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10282653 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 10282712 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282713 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 10282772 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282773 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 10282832 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 10282833 ccactgggggttc 10282845
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 478 bits (241), Expect = e-132 Identities = 250/253 (98%) Strand = Plus / Plus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119134 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 119193 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119194 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 119253 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119254 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 119313 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119314 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 119373 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 119374 ccactgggggttc 119386 Score = 478 bits (241), Expect = e-132 Identities = 250/253 (98%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95905 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 95846 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95845 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 95786 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95785 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 95726 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95725 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 95666 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 95665 ccactgggggttc 95653
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 474 bits (239), Expect = e-131 Identities = 245/247 (99%) Strand = Plus / Minus Query: 80 gtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcag 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 532 gtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcag 473 Query: 140 tgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttcccttaa 199 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 472 tgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttcccttaa 413 Query: 200 ccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatcac 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 412 ccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatcac 353 Query: 260 ttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccactg 319 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 352 tttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccactg 293 Query: 320 ggggttc 326 ||||||| Sbjct: 292 ggggttc 286
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 470 bits (237), Expect = e-129 Identities = 249/253 (98%) Strand = Plus / Plus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 237 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 296 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 297 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccattc 356 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 357 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 416 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 417 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 476 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 477 ccactgggggttc 489
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 470 bits (237), Expect = e-129 Identities = 249/253 (98%) Strand = Plus / Plus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122930 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 122989 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 122990 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccattc 123049 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123050 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 123109 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123110 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 123169 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 123170 ccactgggggttc 123182 Score = 470 bits (237), Expect = e-129 Identities = 249/253 (98%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99807 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 99748 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 99747 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccattc 99688 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99687 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 99628 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99627 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 99568 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 99567 ccactgggggttc 99555
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 470 bits (237), Expect = e-129 Identities = 249/253 (98%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20967 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 20908 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 20907 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccattc 20848 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20847 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 20788 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20787 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 20728 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 20727 ccactgggggttc 20715 Score = 454 bits (229), Expect = e-125 Identities = 247/253 (97%) Strand = Plus / Plus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44151 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 44210 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||| ||| Sbjct: 44211 aagcagtgacaatcgccctatgaagactcgctttcactacggctccggagggttccattc 44270 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44271 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 44330 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44331 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 44390 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 44391 ccactgggggttc 44403
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 470 bits (237), Expect = e-129 Identities = 249/253 (98%) Strand = Plus / Plus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 780 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 839 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 840 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccattc 899 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 900 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 959 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 960 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 1019 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 1020 ccactgggggttc 1032
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 470 bits (237), Expect = e-129 Identities = 249/253 (98%) Strand = Plus / Plus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241389 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 9241448 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9241449 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 9241508 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 9241509 ccttaaccaagccactgcctatgagtcgccagctcattcttcaacaggcacgcggtcaga 9241568 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241569 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 9241628 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 9241629 ccactgggggttc 9241641
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 470 bits (237), Expect = e-129 Identities = 249/253 (98%) Strand = Plus / Plus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122990 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 123049 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 123050 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccattc 123109 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123110 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 123169 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123170 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 123229 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 123230 ccactgggggttc 123242 Score = 470 bits (237), Expect = e-129 Identities = 249/253 (98%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99847 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 99788 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 99787 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccattc 99728 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99727 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 99668 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99667 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 99608 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 99607 ccactgggggttc 99595
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 470 bits (237), Expect = e-129 Identities = 249/253 (98%) Strand = Plus / Plus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52602 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 52661 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 52662 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 52721 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 52722 ccttaaccaagccactgcctatgagtcgccagctcattcttcaacaggcacgcggtcaga 52781 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52782 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 52841 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 52842 ccactgggggttc 52854
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 470 bits (237), Expect = e-129 Identities = 249/253 (98%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6160 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 6101 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 6100 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccattc 6041 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6040 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 5981 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5980 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 5921 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 5920 ccactgggggttc 5908
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 470 bits (237), Expect = e-129 Identities = 249/253 (98%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 301 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 300 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 241 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 181 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 180 gatcactttcccctcccactgcttgggagctcagcacggtttcacgtcctatttcactac 121 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 120 ccactgggggttc 108
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 470 bits (237), Expect = e-129 Identities = 249/253 (98%) Strand = Plus / Plus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123707 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 123766 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 123767 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccattc 123826 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123827 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 123886 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123887 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 123946 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 123947 ccactgggggttc 123959 Score = 470 bits (237), Expect = e-129 Identities = 249/253 (98%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100524 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 100465 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 100464 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccattc 100405 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100404 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 100345 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100344 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 100285 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 100284 ccactgggggttc 100272
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 470 bits (237), Expect = e-129 Identities = 249/253 (98%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 748 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 689 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 688 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccattc 629 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 628 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 569 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 568 gatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 509 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 508 ccactgggggttc 496
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 452 bits (228), Expect = e-124 Identities = 249/255 (97%), Gaps = 2/255 (0%) Strand = Plus / Plus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122470 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 122529 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 122530 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 122589 Query: 194 ccttaaccaagc--cactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 122590 ccttaaccaagccacactgcctatgagtcaccggctcattcttcaacaggcacgcggtca 122649 Query: 252 gagatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcact 311 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122650 gagatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcact 122709 Query: 312 acccactgggggttc 326 ||||||||||||||| Sbjct: 122710 acccactgggggttc 122724
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 452 bits (228), Expect = e-124 Identities = 249/255 (97%), Gaps = 2/255 (0%) Strand = Plus / Plus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825011 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 12825070 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 12825071 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 12825130 Query: 194 ccttaaccaagc--cactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 12825131 ccttaaccaagccacactgcctatgagtcaccggctcattcttcaacaggcacgcggtca 12825190 Query: 252 gagatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcact 311 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825191 gagatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttcact 12825250 Query: 312 acccactgggggttc 326 ||||||||||||||| Sbjct: 12825251 acccactgggggttc 12825265
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 448 bits (226), Expect = e-123 Identities = 232/234 (99%) Strand = Plus / Minus Query: 93 ttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaatcgccct 152 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 628 ttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaatcgccct 569 Query: 153 attaagactcgctttcgctacggctccggtgggttccgttcccttaaccaagccactgcc 212 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 568 atgaagactcgctttcgctacggctccggtgggttccgttcccttaaccaagccactgcc 509 Query: 213 tatgagtcgccggctcattcttcaacaggcacgcggtcagagatcacttccccctcccac 272 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 508 tatgagtcgccggctcattcttcaacaggcacgcggtcagagatcactttcccctcccac 449 Query: 273 tgcttgggagctcagcacggtttcacgttctatttcactacccactgggggttc 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 tgcttgggagctcagcacggtttcacgttctatttcactacccactgggggttc 395
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 412 bits (208), Expect = e-112 Identities = 241/253 (95%), Gaps = 8/253 (3%) Strand = Plus / Plus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74958 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 75017 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 75018 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccattc 75077 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75078 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 75137 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 75138 gatcactttcccctcc--------gggagctcagcacggtttcacgttctatttcactac 75189 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 75190 ccactgggggttc 75202
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 412 bits (208), Expect = e-112 Identities = 241/253 (95%), Gaps = 8/253 (3%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382580 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 382521 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 382520 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccattc 382461 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382460 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 382401 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 382400 gatcactttcccctcc--------gggagctcagcacggtttcacgttctatttcactac 382349 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 382348 ccactgggggttc 382336
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 412 bits (208), Expect = e-112 Identities = 241/253 (95%), Gaps = 8/253 (3%) Strand = Plus / Plus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113049 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 113108 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 113109 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccattc 113168 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113169 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 113228 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 113229 gatcactttcccctcc--------gggagctcagcacggtttcacgttctatttcactac 113280 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 113281 ccactgggggttc 113293
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 412 bits (208), Expect = e-112 Identities = 241/253 (95%), Gaps = 8/253 (3%) Strand = Plus / Plus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367731 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 367790 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 367791 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccattc 367850 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367851 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 367910 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 367911 gatcactttcccctcc--------gggagctcagcacggtttcacgttctatttcactac 367962 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 367963 ccactgggggttc 367975 Score = 412 bits (208), Expect = e-112 Identities = 241/253 (95%), Gaps = 8/253 (3%) Strand = Plus / Plus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184336 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 184395 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 184396 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccattc 184455 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184456 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 184515 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 |||||||| ||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 184516 gatcactttcccctcc--------gggagctcagcacggtttcacgttctatttcactac 184567 Query: 314 ccactgggggttc 326 ||||||||||||| Sbjct: 184568 ccactgggggttc 184580
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 345 bits (174), Expect = 5e-92 Identities = 230/248 (92%), Gaps = 8/248 (3%) Strand = Plus / Plus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133491 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 133550 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 133551 gtgacaatcgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 133605 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133606 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 133665 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | | | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 133666 cattctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 133722 Query: 319 gggggttc 326 |||||||| Sbjct: 133723 gggggttc 133730 Score = 345 bits (174), Expect = 5e-92 Identities = 230/248 (92%), Gaps = 8/248 (3%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104480 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 104421 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 104420 gtgacaatcgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 104366 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104365 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 104306 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | | | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 104305 cattctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 104249 Query: 319 gggggttc 326 |||||||| Sbjct: 104248 gggggttc 104241
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 337 bits (170), Expect = 1e-89 Identities = 229/248 (92%), Gaps = 8/248 (3%) Strand = Plus / Plus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141376 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 141435 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 141436 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 141490 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141491 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 141550 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | | |||||||||||||||||||| |||||||||| ||||||||||||| ||| | Sbjct: 141551 aattctcctcccactgcttgggagct---cacggtttcatgttctatttcactccccgat 141607 Query: 319 gggggttc 326 |||||||| Sbjct: 141608 gggggttc 141615 Score = 337 bits (170), Expect = 1e-89 Identities = 229/248 (92%), Gaps = 8/248 (3%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112281 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 112222 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 112221 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 112167 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112166 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 112107 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | | |||||||||||||||||||| |||||||||| ||||||||||||| ||| | Sbjct: 112106 aattctcctcccactgcttgggagct---cacggtttcatgttctatttcactccccgat 112050 Query: 319 gggggttc 326 |||||||| Sbjct: 112049 gggggttc 112042
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 337 bits (170), Expect = 1e-89 Identities = 229/248 (92%), Gaps = 8/248 (3%) Strand = Plus / Plus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127132 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 127191 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||||||||||| |||||||||||||||||||||| |||||| |||||||| Sbjct: 127192 gtgacaatcgccctatgaagactcgctttcgctacggctacggtgg-----attccctta 127246 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127247 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 127306 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | | | |||||||||||||||||||| |||||||||| ||||||||||||| ||| | Sbjct: 127307 cattctcctcccactgcttgggagct---cacggtttcatgttctatttcactccccgat 127363 Query: 319 gggggttc 326 |||||||| Sbjct: 127364 gggggttc 127371 Score = 337 bits (170), Expect = 1e-89 Identities = 229/248 (92%), Gaps = 8/248 (3%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107790 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 107731 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||||||||||| |||||||||||||||||||||| |||||| |||||||| Sbjct: 107730 gtgacaatcgccctatgaagactcgctttcgctacggctacggtgg-----attccctta 107676 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107675 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 107616 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | | | |||||||||||||||||||| |||||||||| ||||||||||||| ||| | Sbjct: 107615 cattctcctcccactgcttgggagct---cacggtttcatgttctatttcactccccgat 107559 Query: 319 gggggttc 326 |||||||| Sbjct: 107558 gggggttc 107551
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 329 bits (166), Expect = 3e-87 Identities = 228/248 (91%), Gaps = 8/248 (3%) Strand = Plus / Plus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138854 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138913 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||| ||||||||||| ||||||||| Sbjct: 138914 gtgacaattgccctatgaagactcgctttcgctatggctccggtgg-----gttccctta 138968 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138969 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 139028 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | | |||||||||||||||||||| |||||||||| ||||||||||||| ||| | Sbjct: 139029 aattctcctcccactgcttgggagct---cacggtttcatgttctatttcactccccgat 139085 Query: 319 gggggttc 326 |||||||| Sbjct: 139086 gggggttc 139093 Score = 329 bits (166), Expect = 3e-87 Identities = 228/248 (91%), Gaps = 8/248 (3%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111091 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 111032 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||| ||||||||||| ||||||||| Sbjct: 111031 gtgacaattgccctatgaagactcgctttcgctatggctccggtgg-----gttccctta 110977 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110976 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 110917 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | | |||||||||||||||||||| |||||||||| ||||||||||||| ||| | Sbjct: 110916 aattctcctcccactgcttgggagct---cacggtttcatgttctatttcactccccgat 110860 Query: 319 gggggttc 326 |||||||| Sbjct: 110859 gggggttc 110852
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 319 bits (161), Expect = 3e-84 Identities = 227/248 (91%), Gaps = 12/248 (4%) Strand = Plus / Plus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134253 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 134312 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 134313 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 134367 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134368 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagaga--- 134424 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 || | |||||||||||||||||||| |||||||||| ||||||||||||| ||| | Sbjct: 134425 -tttctcctcccactgcttgggagct---cacggtttcatgttctatttcactccccgat 134480 Query: 319 gggggttc 326 |||||||| Sbjct: 134481 gggggttc 134488 Score = 319 bits (161), Expect = 3e-84 Identities = 227/248 (91%), Gaps = 12/248 (4%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106029 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 105970 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 105969 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 105915 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105914 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagaga--- 105858 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 || | |||||||||||||||||||| |||||||||| ||||||||||||| ||| | Sbjct: 105857 -tttctcctcccactgcttgggagct---cacggtttcatgttctatttcactccccgat 105802 Query: 319 gggggttc 326 |||||||| Sbjct: 105801 gggggttc 105794
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 307 bits (155), Expect = 1e-80 Identities = 226/248 (91%), Gaps = 10/248 (4%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 705 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 646 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 645 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 591 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 590 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag--cc 533 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 || | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 532 ctggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 476 Query: 319 gggggttc 326 |||||||| Sbjct: 475 gggggttc 468
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 307 bits (155), Expect = 1e-80 Identities = 226/248 (91%), Gaps = 10/248 (4%) Strand = Plus / Plus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135569 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 135628 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 135629 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 135683 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 135684 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag--cc 135741 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 || | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 135742 ctggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 135798 Query: 319 gggggttc 326 |||||||| Sbjct: 135799 gggggttc 135806 Score = 307 bits (155), Expect = 1e-80 Identities = 226/248 (91%), Gaps = 10/248 (4%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107061 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 107002 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 107001 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 106947 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 106946 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag--cc 106889 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 || | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 106888 ctggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 106832 Query: 319 gggggttc 326 |||||||| Sbjct: 106831 gggggttc 106824
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 307 bits (155), Expect = 1e-80 Identities = 226/248 (91%), Gaps = 10/248 (4%) Strand = Plus / Plus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136207 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 136266 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 136267 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 136321 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 136322 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag--cc 136379 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 || | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 136380 ctggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 136436 Query: 319 gggggttc 326 |||||||| Sbjct: 136437 gggggttc 136444 Score = 307 bits (155), Expect = 1e-80 Identities = 226/248 (91%), Gaps = 10/248 (4%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107350 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 107291 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 107290 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 107236 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 107235 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag--cc 107178 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 || | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 107177 ctggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 107121 Query: 319 gggggttc 326 |||||||| Sbjct: 107120 gggggttc 107113
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 307 bits (155), Expect = 1e-80 Identities = 226/248 (91%), Gaps = 10/248 (4%) Strand = Plus / Plus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142148 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 142207 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 142208 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 142262 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 142263 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag--cc 142320 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 || | ||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 142321 ctggctcctcccactgcttgggagc---ctacggtttcatgttctatttcactccccgat 142377 Query: 319 gggggttc 326 |||||||| Sbjct: 142378 gggggttc 142385 Score = 307 bits (155), Expect = 1e-80 Identities = 226/248 (91%), Gaps = 10/248 (4%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111180 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 111121 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 111120 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 111066 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 111065 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag--cc 111008 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 || | ||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 111007 ctggctcctcccactgcttgggagc---ctacggtttcatgttctatttcactccccgat 110951 Query: 319 gggggttc 326 |||||||| Sbjct: 110950 gggggttc 110943
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 307 bits (155), Expect = 1e-80 Identities = 226/248 (91%), Gaps = 10/248 (4%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2255 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 2196 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 2195 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 2141 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 2140 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag--cc 2083 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 || | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 2082 ctggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 2026 Query: 319 gggggttc 326 |||||||| Sbjct: 2025 gggggttc 2018
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 307 bits (155), Expect = 1e-80 Identities = 226/248 (91%), Gaps = 10/248 (4%) Strand = Plus / Plus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134815 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 134874 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 134875 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 134929 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 134930 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag--cc 134987 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 || | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 134988 ctggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 135044 Query: 319 gggggttc 326 |||||||| Sbjct: 135045 gggggttc 135052 Score = 307 bits (155), Expect = 1e-80 Identities = 226/248 (91%), Gaps = 10/248 (4%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106221 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 106162 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 106161 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 106107 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 106106 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag--cc 106049 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 || | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 106048 ctggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 105992 Query: 319 gggggttc 326 |||||||| Sbjct: 105991 gggggttc 105984
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 307 bits (155), Expect = 1e-80 Identities = 226/248 (91%), Gaps = 10/248 (4%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2499 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 2440 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 2439 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 2385 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 2384 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag--cc 2327 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 || | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 2326 ctggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 2270 Query: 319 gggggttc 326 |||||||| Sbjct: 2269 gggggttc 2262
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 307 bits (155), Expect = 1e-80 Identities = 226/248 (91%), Gaps = 10/248 (4%) Strand = Plus / Plus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135861 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 135920 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 135921 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 135975 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 135976 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag--cc 136033 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 || | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 136034 ctggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 136090 Query: 319 gggggttc 326 |||||||| Sbjct: 136091 gggggttc 136098 Score = 307 bits (155), Expect = 1e-80 Identities = 226/248 (91%), Gaps = 10/248 (4%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106564 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 106505 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 106504 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 106450 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 106449 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag--cc 106392 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 || | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 106391 ctggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 106335 Query: 319 gggggttc 326 |||||||| Sbjct: 106334 gggggttc 106327
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 307 bits (155), Expect = 1e-80 Identities = 226/248 (91%), Gaps = 10/248 (4%) Strand = Plus / Plus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134950 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 135009 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 135010 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 135064 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 135065 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag--cc 135122 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 || | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 135123 ctggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 135179 Query: 319 gggggttc 326 |||||||| Sbjct: 135180 gggggttc 135187 Score = 307 bits (155), Expect = 1e-80 Identities = 226/248 (91%), Gaps = 10/248 (4%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106393 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 106334 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 106333 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 106279 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 106278 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag--cc 106221 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 || | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 106220 ctggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 106164 Query: 319 gggggttc 326 |||||||| Sbjct: 106163 gggggttc 106156
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 307 bits (155), Expect = 1e-80 Identities = 226/248 (91%), Gaps = 10/248 (4%) Strand = Plus / Plus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134948 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 135007 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 135008 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 135062 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 135063 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag--cc 135120 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 || | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 135121 ctggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 135177 Query: 319 gggggttc 326 |||||||| Sbjct: 135178 gggggttc 135185 Score = 307 bits (155), Expect = 1e-80 Identities = 226/248 (91%), Gaps = 10/248 (4%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106390 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 106331 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 106330 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 106276 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 106275 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag--cc 106218 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 || | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 106217 ctggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 106161 Query: 319 gggggttc 326 |||||||| Sbjct: 106160 gggggttc 106153
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 307 bits (155), Expect = 1e-80 Identities = 226/248 (91%), Gaps = 10/248 (4%) Strand = Plus / Plus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134860 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 134919 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 134920 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 134974 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 134975 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag--cc 135032 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 || | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 135033 ctggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 135089 Query: 319 gggggttc 326 |||||||| Sbjct: 135090 gggggttc 135097 Score = 307 bits (155), Expect = 1e-80 Identities = 226/248 (91%), Gaps = 10/248 (4%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106268 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 106209 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 106208 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 106154 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 106153 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag--cc 106096 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 || | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 106095 ctggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 106039 Query: 319 gggggttc 326 |||||||| Sbjct: 106038 gggggttc 106031
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 307 bits (155), Expect = 1e-80 Identities = 226/248 (91%), Gaps = 10/248 (4%) Strand = Plus / Plus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135567 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 135626 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 135627 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 135681 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 135682 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag--cc 135739 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 || | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 135740 ctggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 135796 Query: 319 gggggttc 326 |||||||| Sbjct: 135797 gggggttc 135804 Score = 307 bits (155), Expect = 1e-80 Identities = 226/248 (91%), Gaps = 10/248 (4%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107059 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 107000 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 106999 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 106945 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 106944 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag--cc 106887 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 || | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 106886 ctggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 106830 Query: 319 gggggttc 326 |||||||| Sbjct: 106829 gggggttc 106822
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 307 bits (155), Expect = 1e-80 Identities = 226/248 (91%), Gaps = 10/248 (4%) Strand = Plus / Plus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135298 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 135357 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 135358 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 135412 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 135413 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag--cc 135470 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 || | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 135471 ctggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 135527 Query: 319 gggggttc 326 |||||||| Sbjct: 135528 gggggttc 135535 Score = 307 bits (155), Expect = 1e-80 Identities = 226/248 (91%), Gaps = 10/248 (4%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106840 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 106781 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 106780 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 106726 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 106725 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag--cc 106668 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 || | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 106667 ctggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 106611 Query: 319 gggggttc 326 |||||||| Sbjct: 106610 gggggttc 106603
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 305 bits (154), Expect = 5e-80 Identities = 226/248 (91%), Gaps = 9/248 (3%) Strand = Plus / Plus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131060 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 131119 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 131120 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 131174 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct: 131175 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcag-ggtct 131233 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 |||||||||||||||||| ||||| ||||||||| ||||||||||||| ||| | Sbjct: 131234 ggtccccctcccactgcttgagagct---tacggtttcatgttctatttcactccccgat 131290 Query: 319 gggggttc 326 |||||||| Sbjct: 131291 gggggttc 131298 Score = 305 bits (154), Expect = 5e-80 Identities = 226/248 (91%), Gaps = 9/248 (3%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102385 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 102326 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 102325 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 102271 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct: 102270 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcag-ggtct 102212 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 |||||||||||||||||| ||||| ||||||||| ||||||||||||| ||| | Sbjct: 102211 ggtccccctcccactgcttgagagct---tacggtttcatgttctatttcactccccgat 102155 Query: 319 gggggttc 326 |||||||| Sbjct: 102154 gggggttc 102147
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 303 bits (153), Expect = 2e-79 Identities = 159/161 (98%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 162 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 103 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 102 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 43 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattctt 234 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 42 ccttaaccaagccactgcctatgagtcgccggctcattctt 2
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 301 bits (152), Expect = 7e-79 Identities = 158/160 (98%) Strand = Plus / Minus Query: 74 tgctaagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 tgcttagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat 101 Query: 134 aagcagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttc 193 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 100 aagcagtgacaatcgccctatgaagactcgctttcgctacggctccggtgggttccgttc 41 Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattct 233 |||||||||||||||||||||||||||||||||||||||| Sbjct: 40 ccttaaccaagccactgcctatgagtcgccggctcattct 1
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 299 bits (151), Expect = 3e-78 Identities = 225/248 (90%), Gaps = 10/248 (4%) Strand = Plus / Plus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134827 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 134886 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 134887 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 134941 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 134942 accaagccactgcctattagtcgccggctcattcttcaacaggcacgcggtcagag--cc 134999 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 || | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 135000 ctggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 135056 Query: 319 gggggttc 326 |||||||| Sbjct: 135057 gggggttc 135064 Score = 299 bits (151), Expect = 3e-78 Identities = 225/248 (90%), Gaps = 10/248 (4%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106235 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 106176 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 106175 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 106121 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 106120 accaagccactgcctattagtcgccggctcattcttcaacaggcacgcggtcagag--cc 106063 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 || | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 106062 ctggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 106006 Query: 319 gggggttc 326 |||||||| Sbjct: 106005 gggggttc 105998
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 297 bits (150), Expect = 1e-77 Identities = 225/248 (90%), Gaps = 9/248 (3%) Strand = Plus / Plus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132044 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 132103 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 132104 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 132158 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 132159 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag-ccc 132217 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 132218 cgggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 132274 Query: 319 gggggttc 326 |||||||| Sbjct: 132275 gggggttc 132282 Score = 297 bits (150), Expect = 1e-77 Identities = 225/248 (90%), Gaps = 9/248 (3%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104834 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 104775 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 104774 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 104720 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 104719 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag-ccc 104661 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 104660 cgggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 104604 Query: 319 gggggttc 326 |||||||| Sbjct: 104603 gggggttc 104596
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 297 bits (150), Expect = 1e-77 Identities = 225/248 (90%), Gaps = 9/248 (3%) Strand = Plus / Plus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130936 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 130995 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 130996 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 131050 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 131051 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag-ccc 131109 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 131110 cgggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 131166 Query: 319 gggggttc 326 |||||||| Sbjct: 131167 gggggttc 131174 Score = 297 bits (150), Expect = 1e-77 Identities = 225/248 (90%), Gaps = 9/248 (3%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103699 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 103640 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 103639 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 103585 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 103584 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag-ccc 103526 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 103525 cgggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 103469 Query: 319 gggggttc 326 |||||||| Sbjct: 103468 gggggttc 103461
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 297 bits (150), Expect = 1e-77 Identities = 225/248 (90%), Gaps = 9/248 (3%) Strand = Plus / Plus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139629 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 139688 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 139689 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 139743 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 139744 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagcccc 139803 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | | | ||||||||||||||||| || ||||||||| ||||||||||||| ||| | Sbjct: 139804 cgt-ctcctcccactgcttgggaact---tacggtttcatgttctatttcactccccgat 139859 Query: 319 gggggttc 326 |||||||| Sbjct: 139860 gggggttc 139867 Score = 297 bits (150), Expect = 1e-77 Identities = 225/248 (90%), Gaps = 9/248 (3%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110431 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 110372 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 110371 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 110317 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 110316 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagcccc 110257 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | | | ||||||||||||||||| || ||||||||| ||||||||||||| ||| | Sbjct: 110256 cgt-ctcctcccactgcttgggaact---tacggtttcatgttctatttcactccccgat 110201 Query: 319 gggggttc 326 |||||||| Sbjct: 110200 gggggttc 110193
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 297 bits (150), Expect = 1e-77 Identities = 225/248 (90%), Gaps = 9/248 (3%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 260 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 201 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 200 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 146 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 145 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagcccc 86 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | | | ||||||||||||||||| || ||||||||| ||||||||||||| ||| | Sbjct: 85 cgt-ctcctcccactgcttgggaact---tacggtttcatgttctatttcactccccgat 30 Query: 319 gggggttc 326 |||||||| Sbjct: 29 gggggttc 22
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 297 bits (150), Expect = 1e-77 Identities = 225/248 (90%), Gaps = 9/248 (3%) Strand = Plus / Plus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132037 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 132096 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 132097 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 132151 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 132152 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag-ccc 132210 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 132211 cgggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 132267 Query: 319 gggggttc 326 |||||||| Sbjct: 132268 gggggttc 132275 Score = 297 bits (150), Expect = 1e-77 Identities = 225/248 (90%), Gaps = 9/248 (3%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104832 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 104773 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 104772 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 104718 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 104717 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag-ccc 104659 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 104658 cgggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 104602 Query: 319 gggggttc 326 |||||||| Sbjct: 104601 gggggttc 104594
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 297 bits (150), Expect = 1e-77 Identities = 225/248 (90%), Gaps = 9/248 (3%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 732 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 673 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 672 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 618 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 617 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag-ccc 559 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 558 caggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccggt 502 Query: 319 gggggttc 326 |||||||| Sbjct: 501 gggggttc 494
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 297 bits (150), Expect = 1e-77 Identities = 225/248 (90%), Gaps = 9/248 (3%) Strand = Plus / Plus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 72 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 73 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 127 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 128 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag-ccc 186 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 187 cgggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 243 Query: 319 gggggttc 326 |||||||| Sbjct: 244 gggggttc 251
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 293 bits (148), Expect = 2e-76 Identities = 224/248 (90%), Gaps = 11/248 (4%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1226 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 1167 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 1166 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 1112 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1111 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag---c 1055 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 || | |||||||||||||| ||||| ||||||||| ||||||||||||| ||| | Sbjct: 1054 ctgtctcctcccactgcttgagagct---tacggtttcatgttctatttcactccccgat 998 Query: 319 gggggttc 326 |||||||| Sbjct: 997 gggggttc 990
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 291 bits (147), Expect = 7e-76 Identities = 224/248 (90%), Gaps = 10/248 (4%) Strand = Plus / Plus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51955 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 52014 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| || |||||||||||||| ||||||||||| ||||||||| Sbjct: 52015 gtgacaattgccctatgaatactcgctttcgctatggctccggtgg-----gttccctta 52069 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 52070 accaagccgctgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag--cc 52127 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 || | |||||||||||||||||||| ||||||||| ||||||||||||| |||| | Sbjct: 52128 ctggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccaat 52184 Query: 319 gggggttc 326 |||||||| Sbjct: 52185 gggggttc 52192 Score = 291 bits (147), Expect = 7e-76 Identities = 224/248 (90%), Gaps = 10/248 (4%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37873 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 37814 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| || |||||||||||||| ||||||||||| ||||||||| Sbjct: 37813 gtgacaattgccctatgaatactcgctttcgctatggctccggtgg-----gttccctta 37759 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 37758 accaagccgctgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag--cc 37701 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 || | |||||||||||||||||||| ||||||||| ||||||||||||| |||| | Sbjct: 37700 ctggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccaat 37644 Query: 319 gggggttc 326 |||||||| Sbjct: 37643 gggggttc 37636
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 291 bits (147), Expect = 7e-76 Identities = 213/233 (91%), Gaps = 9/233 (3%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 256 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 197 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 196 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 142 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 141 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagcccc 82 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcact 311 | | | ||||||||||||||||| || ||||||||| ||||||||||||| Sbjct: 81 cgt-ctcctcccactgcttgggaact---tacggtttcatgttctatttcact 33
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 291 bits (147), Expect = 7e-76 Identities = 224/248 (90%), Gaps = 10/248 (4%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4801 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 4742 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| || |||||||||||||| ||||||||||| ||||||||| Sbjct: 4741 gtgacaattgccctatgaatactcgctttcgctatggctccggtgg-----gttccctta 4687 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 4686 accaagccgctgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag--cc 4629 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 || | |||||||||||||||||||| ||||||||| ||||||||||||| |||| | Sbjct: 4628 ctggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccaat 4572 Query: 319 gggggttc 326 |||||||| Sbjct: 4571 gggggttc 4564
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 289 bits (146), Expect = 3e-75 Identities = 224/248 (90%), Gaps = 9/248 (3%) Strand = Plus / Plus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135170 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 135229 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| |||| || ||||||||||||||||||||||||||||| ||||||||| Sbjct: 135230 gtgacaattgccccatgaagactcgctttcgctacggctccggtgg-----gttccctta 135284 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 135285 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagtcct 135344 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | | | ||||||||||||||| |||| ||||||||| ||||||||||||| ||| | Sbjct: 135345 cgt-ctcctcccactgcttggaagct---tacggtttcatgttctatttcactccccgat 135400 Query: 319 gggggttc 326 |||||||| Sbjct: 135401 gggggttc 135408 Score = 289 bits (146), Expect = 3e-75 Identities = 224/248 (90%), Gaps = 9/248 (3%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106736 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 106677 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| |||| || ||||||||||||||||||||||||||||| ||||||||| Sbjct: 106676 gtgacaattgccccatgaagactcgctttcgctacggctccggtgg-----gttccctta 106622 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 106621 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagtcct 106562 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | | | ||||||||||||||| |||| ||||||||| ||||||||||||| ||| | Sbjct: 106561 cgt-ctcctcccactgcttggaagct---tacggtttcatgttctatttcactccccgat 106506 Query: 319 gggggttc 326 |||||||| Sbjct: 106505 gggggttc 106498
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 289 bits (146), Expect = 3e-75 Identities = 224/248 (90%), Gaps = 9/248 (3%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 730 agtttcacccaagcttcatcctggtcatagatagatcacccaggttcgggtccataagca 671 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 670 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 616 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 615 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagccca 556 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 555 -gggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 500 Query: 319 gggggttc 326 |||||||| Sbjct: 499 gggggttc 492
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 289 bits (146), Expect = 3e-75 Identities = 223/248 (89%), Gaps = 8/248 (3%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86996 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 86937 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| |||| || |||||||||| |||||||||||||||||| ||||||||| Sbjct: 86936 gtgacaattgccccatgaagactcgctctcgctacggctccggtgg-----gttccctta 86882 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 86881 accaagccactgcctataagtcgccggctcattcttcaacaggcacgcggtcagagatct 86822 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 86821 aattttcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 86765 Query: 319 gggggttc 326 |||||||| Sbjct: 86764 gggggttc 86757
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 289 bits (146), Expect = 3e-75 Identities = 224/248 (90%), Gaps = 9/248 (3%) Strand = Plus / Plus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 132267 agtttcacccaagcttcatcctggtcatagatagatcacccaggttcgggtccataagca 132326 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 132327 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 132381 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 132382 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagccca 132441 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 132442 -gggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 132497 Query: 319 gggggttc 326 |||||||| Sbjct: 132498 gggggttc 132505 Score = 289 bits (146), Expect = 3e-75 Identities = 224/248 (90%), Gaps = 9/248 (3%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 104497 agtttcacccaagcttcatcctggtcatagatagatcacccaggttcgggtccataagca 104438 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 104437 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 104383 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 104382 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagccca 104323 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 104322 -gggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 104267 Query: 319 gggggttc 326 |||||||| Sbjct: 104266 gggggttc 104259
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 289 bits (146), Expect = 3e-75 Identities = 224/248 (90%), Gaps = 9/248 (3%) Strand = Plus / Plus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135449 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 135508 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| |||| || ||||||||||||||||||||||||||||| ||||||||| Sbjct: 135509 gtgacaattgccccatgaagactcgctttcgctacggctccggtgg-----gttccctta 135563 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 135564 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagtcct 135623 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | | | ||||||||||||||| |||| ||||||||| ||||||||||||| ||| | Sbjct: 135624 cgt-ctcctcccactgcttggaagct---tacggtttcatgttctatttcactccccgat 135679 Query: 319 gggggttc 326 |||||||| Sbjct: 135680 gggggttc 135687 Score = 289 bits (146), Expect = 3e-75 Identities = 224/248 (90%), Gaps = 9/248 (3%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106958 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 106899 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| |||| || ||||||||||||||||||||||||||||| ||||||||| Sbjct: 106898 gtgacaattgccccatgaagactcgctttcgctacggctccggtgg-----gttccctta 106844 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 106843 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagtcct 106784 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | | | ||||||||||||||| |||| ||||||||| ||||||||||||| ||| | Sbjct: 106783 cgt-ctcctcccactgcttggaagct---tacggtttcatgttctatttcactccccgat 106728 Query: 319 gggggttc 326 |||||||| Sbjct: 106727 gggggttc 106720
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 289 bits (146), Expect = 3e-75 Identities = 223/248 (89%), Gaps = 8/248 (3%) Strand = Plus / Plus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131136 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 131195 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||| | ||||||||||||||||||||||||||||| |||||||| Sbjct: 131196 gtgacaattgccctgtgaagactcgctttcgctacggctccggtgg-----tttccctta 131250 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 131251 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagtccc 131310 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 || |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 131311 gagcctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 131367 Query: 319 gggggttc 326 |||||||| Sbjct: 131368 gggggttc 131375 Score = 289 bits (146), Expect = 3e-75 Identities = 223/248 (89%), Gaps = 8/248 (3%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104258 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 104199 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||| | ||||||||||||||||||||||||||||| |||||||| Sbjct: 104198 gtgacaattgccctgtgaagactcgctttcgctacggctccggtgg-----tttccctta 104144 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 104143 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagtccc 104084 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 || |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 104083 gagcctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 104027 Query: 319 gggggttc 326 |||||||| Sbjct: 104026 gggggttc 104019
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 289 bits (146), Expect = 3e-75 Identities = 224/248 (90%), Gaps = 9/248 (3%) Strand = Plus / Plus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 133228 agtttcacccaagcttcatcctggtcatagatagatcacccaggttcgggtccataagca 133287 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 133288 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 133342 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 133343 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagccca 133402 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 133403 -gggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 133458 Query: 319 gggggttc 326 |||||||| Sbjct: 133459 gggggttc 133466 Score = 289 bits (146), Expect = 3e-75 Identities = 224/248 (90%), Gaps = 9/248 (3%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 105421 agtttcacccaagcttcatcctggtcatagatagatcacccaggttcgggtccataagca 105362 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 105361 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 105307 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 105306 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagccca 105247 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 105246 -gggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 105191 Query: 319 gggggttc 326 |||||||| Sbjct: 105190 gggggttc 105183
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 289 bits (146), Expect = 3e-75 Identities = 223/248 (89%), Gaps = 8/248 (3%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89082 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 89023 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| |||| || |||||||||| |||||||||||||||||| ||||||||| Sbjct: 89022 gtgacaattgccccatgaagactcgctctcgctacggctccggtgg-----gttccctta 88968 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 88967 accaagccactgcctataagtcgccggctcattcttcaacaggcacgcggtcagagatct 88908 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 88907 aattttcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 88851 Query: 319 gggggttc 326 |||||||| Sbjct: 88850 gggggttc 88843
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 287 bits (145), Expect = 1e-74 Identities = 214/234 (91%), Gaps = 11/234 (4%) Strand = Plus / Plus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138773 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138832 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 138833 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 138887 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 138888 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag--cc 138945 Query: 259 ct-tccccctcccactgcttgggagctcagcacggtttcacgttctatttcact 311 || | |||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 138946 ctgggctcctcccactgcttgggagct---tacggtttcatgttctatttcact 138996 Score = 287 bits (145), Expect = 1e-74 Identities = 214/234 (91%), Gaps = 11/234 (4%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110324 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 110265 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 110264 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 110210 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 110209 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag--cc 110152 Query: 259 ct-tccccctcccactgcttgggagctcagcacggtttcacgttctatttcact 311 || | |||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 110151 ctgggctcctcccactgcttgggagct---tacggtttcatgttctatttcact 110101
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 287 bits (145), Expect = 1e-74 Identities = 213/233 (91%), Gaps = 12/233 (5%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 828 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 769 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 768 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 714 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 713 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag--cc 656 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcact 311 || |||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 655 ct--ggcctcccactgcttgggagct---tacggtttcatgttctatttcact 608
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 285 bits (144), Expect = 4e-74 Identities = 168/176 (95%), Gaps = 5/176 (2%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 232 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 173 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 172 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 118 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag 62
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 285 bits (144), Expect = 4e-74 Identities = 168/176 (95%), Gaps = 5/176 (2%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 216 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 157 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 156 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 102 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag 46
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 285 bits (144), Expect = 4e-74 Identities = 227/252 (90%), Gaps = 12/252 (4%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46988 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 46929 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 46928 gtgacaattgccctatgaagactcgctttcgctacggctccggtgggttcc-----ctta 46874 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagat-- 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 46873 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagcttc 46814 Query: 257 cacttcccc--ctcccactgcttgggagctcagcacggtttcacgttctatttcactacc 314 ||| | || ||||||||||||| ||||| | |||||||| ||||||||||||| || Sbjct: 46813 cacggcgcctcctcccactgcttgagagctta---cggtttcatgttctatttcactccc 46757 Query: 315 cactgggggttc 326 | ||||||||| Sbjct: 46756 cgatgggggttc 46745
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 285 bits (144), Expect = 4e-74 Identities = 153/156 (98%) Strand = Plus / Plus Query: 171 tacggctccggtgggttccgttcccttaaccaagccactgcctatgagtcgccggctcat 230 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107875 tacggctccggtgggttccgttcccttaaccaagccactgcctatgagtcgccggctcat 107934 Query: 231 tcttcaacaggcacgcggtcagagatcacttccccctcccactgcttgggagctcagcac 290 ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| Sbjct: 107935 tcttcaacaggcacgcggtcagagatcactttcccctcccactggttgggagctcagcac 107994 Query: 291 ggtttcacgttctatttcactacccactgggggttc 326 ||||||||||||||||||| |||||||||||||||| Sbjct: 107995 ggtttcacgttctatttcattacccactgggggttc 108030
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 285 bits (144), Expect = 4e-74 Identities = 168/176 (95%), Gaps = 5/176 (2%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177575 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 177516 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 177515 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 177461 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177460 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag 177405
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 285 bits (144), Expect = 4e-74 Identities = 168/176 (95%), Gaps = 5/176 (2%) Strand = Plus / Plus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138978 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 139037 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 139038 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 139092 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139093 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag 139148 Score = 285 bits (144), Expect = 4e-74 Identities = 168/176 (95%), Gaps = 5/176 (2%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110321 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 110262 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 110261 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 110207 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110206 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag 110151 Score = 56.0 bits (28), Expect = 7e-05 Identities = 54/62 (87%), Gaps = 3/62 (4%) Strand = Plus / Plus Query: 265 cctcccactgcttgggagctcagcacggtttcacgttctatttcactacccactgggggt 324 |||||||||||||||||||| | |||||||| ||||||||||||| ||| ||||||| Sbjct: 139161 cctcccactgcttgggagctta---cggtttcatgttctatttcactccccgatgggggt 139217 Query: 325 tc 326 || Sbjct: 139218 tc 139219 Score = 56.0 bits (28), Expect = 7e-05 Identities = 54/62 (87%), Gaps = 3/62 (4%) Strand = Plus / Minus Query: 265 cctcccactgcttgggagctcagcacggtttcacgttctatttcactacccactgggggt 324 |||||||||||||||||||| | |||||||| ||||||||||||| ||| ||||||| Sbjct: 110138 cctcccactgcttgggagctta---cggtttcatgttctatttcactccccgatgggggt 110082 Query: 325 tc 326 || Sbjct: 110081 tc 110080
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 283 bits (143), Expect = 2e-73 Identities = 225/249 (90%), Gaps = 10/249 (4%) Strand = Plus / Plus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115478 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 115537 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| |||||| ||||||||||||||||||||||||||||| | ||||||| Sbjct: 115538 gtgacaattgccctaagaagactcgctttcgctacggctccggtgg-----gctccctta 115592 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagaga-tc 257 |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || Sbjct: 115593 accaggccactgcctataagtcgccggctcattcttcaacaggcacgcggtcagagattc 115652 Query: 258 acttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccac 317 | || | |||||||||||||||||||| ||||||||| ||||||||||||| ||| Sbjct: 115653 aatt-ctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccga 115708 Query: 318 tgggggttc 326 ||||||||| Sbjct: 115709 tgggggttc 115717 Score = 283 bits (143), Expect = 2e-73 Identities = 225/249 (90%), Gaps = 10/249 (4%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86642 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 86583 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| |||||| ||||||||||||||||||||||||||||| | ||||||| Sbjct: 86582 gtgacaattgccctaagaagactcgctttcgctacggctccggtgg-----gctccctta 86528 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagaga-tc 257 |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || Sbjct: 86527 accaggccactgcctataagtcgccggctcattcttcaacaggcacgcggtcagagattc 86468 Query: 258 acttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccac 317 | || | |||||||||||||||||||| ||||||||| ||||||||||||| ||| Sbjct: 86467 aatt-ctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccga 86412 Query: 318 tgggggttc 326 ||||||||| Sbjct: 86411 tgggggttc 86403
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 281 bits (142), Expect = 7e-73 Identities = 223/248 (89%), Gaps = 9/248 (3%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 739 agtttcacccaagctccatcctggtcatggatagatcacccaggttcgggtccataagca 680 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| |||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 679 gtgacaattgccctacgaagactcgctttcgctacggctccggtgg-----gttccctta 625 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 624 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag-ccc 566 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 565 cgggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 509 Query: 319 gggggttc 326 |||||||| Sbjct: 508 gggggttc 501
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 281 bits (142), Expect = 7e-73 Identities = 222/248 (89%), Gaps = 8/248 (3%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 737 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 678 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| |||| | |||||| |||||||||||||||||||||| ||||||||| Sbjct: 677 gtgacaattgccccaggaagacttgctttcgctacggctccggtgg-----gttccctta 623 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 622 accaggccactgcctataagtcgccggctcattcttcaacaggcacgcggtcagagatcc 563 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 562 gattctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 506 Query: 319 gggggttc 326 |||||||| Sbjct: 505 gggggttc 498
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 278 bits (140), Expect = 1e-71 Identities = 211/233 (90%), Gaps = 10/233 (4%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4961 agtttcacctaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 4902 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 4901 gtgacaatagccctatgaagactcgctttcgctacggctccggtgg-----tttccctta 4847 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 4846 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag--cc 4789 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcact 311 | | |||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 4788 ccagctcctcccactgcttgggagct---tacggtttcatgttctatttcact 4739
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 278 bits (140), Expect = 1e-71 Identities = 211/233 (90%), Gaps = 10/233 (4%) Strand = Plus / Plus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22964 agtttcacctaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 23023 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 23024 gtgacaatagccctatgaagactcgctttcgctacggctccggtgg-----tttccctta 23078 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 23079 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag--cc 23136 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcact 311 | | |||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 23137 ccagctcctcccactgcttgggagct---tacggtttcatgttctatttcact 23186
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 276 bits (139), Expect = 4e-71 Identities = 210/233 (90%), Gaps = 8/233 (3%) Strand = Plus / Plus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145826 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 145885 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| |||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 145886 gtgacaattgccctaggaagactcgctttcgctacggctccggtgg-----gttccctta 145940 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 145941 accaggccactgcctataagtcgccggctcattcttcaacaggcacgcggtcagggatcc 146000 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcact 311 | | ||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 146001 gattctcctcccactgcttgggagc---ctacggtttcatgttctatttcact 146050 Score = 276 bits (139), Expect = 4e-71 Identities = 210/233 (90%), Gaps = 8/233 (3%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112636 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 112577 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| |||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 112576 gtgacaattgccctaggaagactcgctttcgctacggctccggtgg-----gttccctta 112522 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 112521 accaggccactgcctataagtcgccggctcattcttcaacaggcacgcggtcagggatcc 112462 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcact 311 | | ||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 112461 gattctcctcccactgcttgggagc---ctacggtttcatgttctatttcact 112412
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 276 bits (139), Expect = 4e-71 Identities = 222/248 (89%), Gaps = 5/248 (2%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 719 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 660 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||| ||||||||||||||||| ||||||||||| | | |||||||| Sbjct: 659 gtgacaattgccctgggaagactcgctttcgctatggctccggtgg--ttctttccctta 602 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 601 accaggccactgcctataagtcgccggctcattcttcaacaggcacgcggtcagagatcc 542 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | | ||||||||||||||| |||| ||||||||| ||||||||||||| ||| | Sbjct: 541 gattctcctcccactgcttggaagct---tacggtttcatgttctatttcactccccgat 485 Query: 319 gggggttc 326 |||||||| Sbjct: 484 gggggttc 477
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 274 bits (138), Expect = 2e-70 Identities = 221/248 (89%), Gaps = 8/248 (3%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 733 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagta 674 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| |||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 673 gtgacaattgccctaggaagactcgctttcgctacggctccggtgg-----gttccctta 619 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 618 accaggccactacctataagtcgccggctcattcttcaacaggcacgcggtcagagattc 559 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 558 gattctcctcccactgcttgggagct---tacggtttcatgttctatttcactcccctat 502 Query: 319 gggggttc 326 |||||||| Sbjct: 501 gggggttc 494
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 274 bits (138), Expect = 2e-70 Identities = 215/240 (89%), Gaps = 8/240 (3%) Strand = Plus / Plus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 127716 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccatgagcagtgacaat 127775 Query: 147 cgccctattaagactcgctttcgctacggctccggtgggttccgttcccttaaccaagcc 206 |||||| ||||||||||||||||||||||||||||| ||||||||||||| ||| Sbjct: 127776 tgccctaggaagactcgctttcgctacggctccggtgg-----gttcccttaaccaggcc 127830 Query: 207 actgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatcacttccccc 266 |||||||||||||||||||||||||| |||||||||| ||||||||||||| | | || Sbjct: 127831 actgcctatgagtcgccggctcattcctcaacaggcatgcggtcagagatccaattctcc 127890 Query: 267 tcccactgcttgggagctcagcacggtttcacgttctatttcactacccactgggggttc 326 |||||||||||||||||| ||||||||| ||||||||||||| ||| ||||||||| Sbjct: 127891 tcccactgcttgggagct---tacggtttcatgttctatttcactcccctatgggggttc 127947 Score = 274 bits (138), Expect = 2e-70 Identities = 215/240 (89%), Gaps = 8/240 (3%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 95731 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccatgagcagtgacaat 95672 Query: 147 cgccctattaagactcgctttcgctacggctccggtgggttccgttcccttaaccaagcc 206 |||||| ||||||||||||||||||||||||||||| ||||||||||||| ||| Sbjct: 95671 tgccctaggaagactcgctttcgctacggctccggtgg-----gttcccttaaccaggcc 95617 Query: 207 actgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatcacttccccc 266 |||||||||||||||||||||||||| |||||||||| ||||||||||||| | | || Sbjct: 95616 actgcctatgagtcgccggctcattcctcaacaggcatgcggtcagagatccaattctcc 95557 Query: 267 tcccactgcttgggagctcagcacggtttcacgttctatttcactacccactgggggttc 326 |||||||||||||||||| ||||||||| ||||||||||||| ||| ||||||||| Sbjct: 95556 tcccactgcttgggagct---tacggtttcatgttctatttcactcccctatgggggttc 95500
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 270 bits (136), Expect = 3e-69 Identities = 212/234 (90%), Gaps = 10/234 (4%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 364914 agtttcacccaagcttcatcctggtcatagatagatcacccaggttcgggtccataagca 364855 Query: 139 gtgacaatcgccctattaagactcg-ctttcgctacggctccggtgggttccgttccctt 197 |||||||| ||||||| |||||||| ||||||||||||||||||||| |||||||| Sbjct: 364854 gtgacaattgccctatgaagactcgcctttcgctacggctccggtgg-----gttccctt 364800 Query: 198 aaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatc 257 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 364799 aaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagccc 364740 Query: 258 acttccccctcccactgcttgggagctcagcacggtttcacgttctatttcact 311 | | |||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 364739 a-gggctcctcccactgcttgggagct---tacggtttcatgttctatttcact 364690
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 270 bits (136), Expect = 3e-69 Identities = 166/176 (94%), Gaps = 5/176 (2%) Strand = Plus / Plus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129799 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 129858 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 129859 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----tttccctta 129913 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag 254 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129914 accaagccactacctatgagtcgccggctcattcttcaacaggcacgcggtcagag 129969 Score = 270 bits (136), Expect = 3e-69 Identities = 166/176 (94%), Gaps = 5/176 (2%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102657 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 102598 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 102597 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----tttccctta 102543 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag 254 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102542 accaagccactacctatgagtcgccggctcattcttcaacaggcacgcggtcagag 102487 Score = 56.0 bits (28), Expect = 7e-05 Identities = 54/62 (87%), Gaps = 3/62 (4%) Strand = Plus / Plus Query: 265 cctcccactgcttgggagctcagcacggtttcacgttctatttcactacccactgggggt 324 |||||||||||||||||||| | |||||||| ||||||||||||| ||| ||||||| Sbjct: 129984 cctcccactgcttgggagctta---cggtttcatgttctatttcactccccgatgggggt 130040 Query: 325 tc 326 || Sbjct: 130041 tc 130042 Score = 56.0 bits (28), Expect = 7e-05 Identities = 54/62 (87%), Gaps = 3/62 (4%) Strand = Plus / Minus Query: 265 cctcccactgcttgggagctcagcacggtttcacgttctatttcactacccactgggggt 324 |||||||||||||||||||| | |||||||| ||||||||||||| ||| ||||||| Sbjct: 102472 cctcccactgcttgggagctta---cggtttcatgttctatttcactccccgatgggggt 102416 Query: 325 tc 326 || Sbjct: 102415 tc 102414
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 266 bits (134), Expect = 4e-68 Identities = 137/138 (99%) Strand = Plus / Minus Query: 189 cgttcccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcgg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 626 cgttcccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcgg 567 Query: 249 tcagagatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttc 308 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 566 tcagagatcactttcccctcccactgcttgggagctcagcacggtttcacgttctatttc 507 Query: 309 actacccactgggggttc 326 |||||||||||||||||| Sbjct: 506 actacccactgggggttc 489
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 266 bits (134), Expect = 4e-68 Identities = 220/248 (88%), Gaps = 8/248 (3%) Strand = Plus / Plus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| | Sbjct: 117416 agtttcacccaagcttcatcctggtcatggttagatcacccaggttcgggtccataagta 117475 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| |||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 117476 gtgacaattgccctaggaagactcgctttcgctacggctccggtgg-----gttccctta 117530 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 117531 accaggccactacctataagtcgccggctcattcttcaacaggcacgcggtcagagattc 117590 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 117591 gattctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 117647 Query: 319 gggggttc 326 |||||||| Sbjct: 117648 gggggttc 117655 Score = 266 bits (134), Expect = 4e-68 Identities = 220/248 (88%), Gaps = 8/248 (3%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| | Sbjct: 90686 agtttcacccaagcttcatcctggtcatggttagatcacccaggttcgggtccataagta 90627 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| |||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 90626 gtgacaattgccctaggaagactcgctttcgctacggctccggtgg-----gttccctta 90572 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 90571 accaggccactacctataagtcgccggctcattcttcaacaggcacgcggtcagagattc 90512 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 90511 gattctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 90455 Query: 319 gggggttc 326 |||||||| Sbjct: 90454 gggggttc 90447
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 262 bits (132), Expect = 6e-67 Identities = 220/248 (88%), Gaps = 11/248 (4%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 737 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 678 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 677 gtgacaattgccctatgaagactcgctttcgctacggctccggtgggttcc-----ctta 623 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 ||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 622 accaagccactgcgtatgagtcgccggctcatttttcaacaggcacgcgttcagagc--- 566 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 || | |||||||||||||| ||||| ||||||||| ||| ||||||||| ||| | Sbjct: 565 ctgtctcctcccactgcttgagagct---tacggtttcatgttttatttcactccccgat 509 Query: 319 gggggttc 326 |||||||| Sbjct: 508 gggggttc 501
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 262 bits (132), Expect = 6e-67 Identities = 165/176 (93%), Gaps = 5/176 (2%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5229 agtttcacctaaacttcatcctggtcatggatagatcacccaggttcgggtccataagca 5170 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 5169 gtgacaatagccctatgaagactcgctttcgctacggctccggtgg-----tttccctta 5115 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5114 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag 5059
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 262 bits (132), Expect = 6e-67 Identities = 165/176 (93%), Gaps = 5/176 (2%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5229 agtttcacctaaacttcatcctggtcatggatagatcacccaggttcgggtccataagca 5170 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 5169 gtgacaatagccctatgaagactcgctttcgctacggctccggtgg-----tttccctta 5115 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5114 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag 5059
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 260 bits (131), Expect = 2e-66 Identities = 217/244 (88%), Gaps = 10/244 (4%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 730 agtttcaccaaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 671 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| | ||||| || |||||||||||||| ||||||||||| ||||||||| Sbjct: 670 gtgacaatagtcctatgaatactcgctttcgctatggctccggtgg-----gttccctta 616 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 615 accaagccgctgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag--cc 558 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 || | ||||||||||||||| |||| ||||||||| ||||||||||||| |||| | Sbjct: 557 ctggctcctcccactgcttggtagct---tacggtttcatgttctatttcactccccaat 501 Query: 319 gggg 322 |||| Sbjct: 500 gggg 497
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 258 bits (130), Expect = 1e-65 Identities = 219/248 (88%), Gaps = 8/248 (3%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4622 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 4563 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| |||||| |||||||||||||||||||||||||||| |||||||| Sbjct: 4562 gtgacaattgccctaggaagactcgctttcgctacggctccggtg-----aattccctta 4508 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4507 accaggccactgcctataagtcgccggctcattcttcaacaggcacgcggtcagagatcc 4448 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | | |||| |||||||||| |||| ||| ||||| ||||||||||||| ||| | Sbjct: 4447 gattctcctctcactgcttggaagct---tacgatttcatgttctatttcactccccgat 4391 Query: 319 gggggttc 326 |||||||| Sbjct: 4390 gggggttc 4383
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 258 bits (130), Expect = 1e-65 Identities = 219/248 (88%), Gaps = 8/248 (3%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 733 agtttcacccgagcttcatcctggtcatggatagatcacccaggttcgggtccataagta 674 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| |||| | ||||||||||||||||||||||||||||| || |||||| Sbjct: 673 gtgacaattgccccaggaagactcgctttcgctacggctccggtgg-----gtcccctta 619 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 618 accaggccactacctataagtcgccggctcattcttcaacaggcacgcggtcagagatcc 559 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | | |||||||||||||||||||| ||||||||| ||||||||||||| ||| | Sbjct: 558 gattctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgat 502 Query: 319 gggggttc 326 |||||||| Sbjct: 501 gggggttc 494
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 258 bits (130), Expect = 1e-65 Identities = 219/248 (88%), Gaps = 8/248 (3%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 732 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 673 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| |||||| |||||||||||||||||||||||||||| |||||||| Sbjct: 672 gtgacaattgccctaggaagactcgctttcgctacggctccggtg-----aattccctta 618 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 617 accaggccactgcctataagtcgccggctcattcttcaacaggcacgcggtcagagatcc 558 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | | |||| |||||||||| |||| ||| ||||| ||||||||||||| ||| | Sbjct: 557 gattctcctctcactgcttggaagct---tacgatttcatgttctatttcactccccgat 501 Query: 319 gggggttc 326 |||||||| Sbjct: 500 gggggttc 493
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 258 bits (130), Expect = 1e-65 Identities = 219/248 (88%), Gaps = 8/248 (3%) Strand = Plus / Plus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150513 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 150572 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| |||||| |||||||||||||||||||||||||||| |||||||| Sbjct: 150573 gtgacaattgccctaggaagactcgctttcgctacggctccggtg-----aattccctta 150627 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 150628 accaggccactgcctataagtcgccggctcattcttcaacaggcacgcggtcagagatcc 150687 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | | |||| |||||||||| |||| ||| ||||| ||||||||||||| ||| | Sbjct: 150688 gattctcctctcactgcttggaagct---tacgatttcatgttctatttcactccccgat 150744 Query: 319 gggggttc 326 |||||||| Sbjct: 150745 gggggttc 150752 Score = 258 bits (130), Expect = 1e-65 Identities = 219/248 (88%), Gaps = 8/248 (3%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118153 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 118094 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| |||||| |||||||||||||||||||||||||||| |||||||| Sbjct: 118093 gtgacaattgccctaggaagactcgctttcgctacggctccggtg-----aattccctta 118039 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 118038 accaggccactgcctataagtcgccggctcattcttcaacaggcacgcggtcagagatcc 117979 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | | |||| |||||||||| |||| ||| ||||| ||||||||||||| ||| | Sbjct: 117978 gattctcctctcactgcttggaagct---tacgatttcatgttctatttcactccccgat 117922 Query: 319 gggggttc 326 |||||||| Sbjct: 117921 gggggttc 117914
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 258 bits (130), Expect = 1e-65 Identities = 219/248 (88%), Gaps = 8/248 (3%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 732 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 673 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| |||||| |||||||||||||||||||||||||||| |||||||| Sbjct: 672 gtgacaattgccctaggaagactcgctttcgctacggctccggtg-----aattccctta 618 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 617 accaggccactgcctataagtcgccggctcattcttcaacaggcacgcggtcagagatcc 558 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 | | |||| |||||||||| |||| ||| ||||| ||||||||||||| ||| | Sbjct: 557 gattctcctctcactgcttggaagct---tacgatttcatgttctatttcactccccgat 501 Query: 319 gggggttc 326 |||||||| Sbjct: 500 gggggttc 493
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 256 bits (129), Expect = 4e-65 Identities = 135/137 (98%) Strand = Plus / Minus Query: 190 gttcccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggt 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 585 gttcccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggt 526 Query: 250 cagagatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttca 309 ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 525 cagagatcaatttcccctcccactgcttgggagctcagcacggtttcacgttctatttca 466 Query: 310 ctacccactgggggttc 326 ||||||||||||||||| Sbjct: 465 ctacccactgggggttc 449
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 254 bits (128), Expect = 2e-64 Identities = 211/238 (88%), Gaps = 8/238 (3%) Strand = Plus / Minus Query: 89 aagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaatcg 148 |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| | Sbjct: 2767 aagcttcatcctggtcatggttagatcacccaggttcgggtccataagtagtgacaattg 2708 Query: 149 ccctattaagactcgctttcgctacggctccggtgggttccgttcccttaaccaagccac 208 ||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 2707 ccctaggaagactcgctttcgctacggctccggtgg-----gttcccttaaccaggccac 2653 Query: 209 tgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatcacttccccctc 268 | ||||| |||||||||||||||||||||||||||||||||||||||| | | |||| Sbjct: 2652 tacctataagtcgccggctcattcttcaacaggcacgcggtcagagattcgattctcctc 2593 Query: 269 ccactgcttgggagctcagcacggtttcacgttctatttcactacccactgggggttc 326 |||||||||||||||| ||||||||| ||||||||||||| ||| ||||||||| Sbjct: 2592 ccactgcttgggagct---tacggtttcatgttctatttcactccccgatgggggttc 2538
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 254 bits (128), Expect = 2e-64 Identities = 164/176 (93%), Gaps = 5/176 (2%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 751 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 692 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| |||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 691 gtgacaattgccctacgaagactcgctttcgctacggctccggtgg-----gttccctta 637 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag 254 ||||||||||||||||||||||||||| | ||||||||||||||||||| |||||| Sbjct: 636 accaagccactgcctatgagtcgccggttaattcttcaacaggcacgcgttcagag 581 Score = 50.1 bits (25), Expect = 0.004 Identities = 42/47 (89%), Gaps = 3/47 (6%) Strand = Plus / Minus Query: 265 cctcccactgcttgggagctcagcacggtttcacgttctatttcact 311 |||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 559 cctcccactgcttgggagct---tacggtttcatgttctatttcact 516
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 248 bits (125), Expect = 9e-63 Identities = 128/129 (99%) Strand = Plus / Minus Query: 198 aaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 490 aaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatc 431 Query: 258 acttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccac 317 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 430 actttcccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccac 371 Query: 318 tgggggttc 326 ||||||||| Sbjct: 370 tgggggttc 362
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 246 bits (124), Expect = 4e-62 Identities = 209/234 (89%), Gaps = 10/234 (4%) Strand = Plus / Plus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccat-aagc 137 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 5815 agtttcatcca-gcttcatcctggtcatggatagatcacccaggttcgggtccataaagc 5873 Query: 138 agtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctt 197 ||||||||| ||||||| |||||||||| |||||||||||||||||| || ||||| Sbjct: 5874 agtgacaattgccctatgaagactcgctctcgctacggctccggtgg-----gtgccctt 5928 Query: 198 aaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatc 257 |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct: 5929 aaccaagccactgcctataagtcgccggctcattcttcaaaaggcacgcggtcagagatt 5988 Query: 258 acttccccctcccactgcttgggagctcagcacggtttcacgttctatttcact 311 | | | ||||||||||||||| ||| ||||||||| ||||||||||||| Sbjct: 5989 ccattctcctcccactgcttggaggct---tacggtttcatgttctatttcact 6039
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 238 bits (120), Expect = 9e-60 Identities = 212/242 (87%), Gaps = 8/242 (3%) Strand = Plus / Plus Query: 85 atccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgaca 144 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 138541 atccaagcttcatcctggtcatggatagatcacccgggttcgggtccataagcagcgaca 138600 Query: 145 atcgccctattaagactcgctttcgctacggctccggtgggttccgttcccttaaccaag 204 | ||||| ||||||||||||||||||||||||||||| ||||||||||||| | Sbjct: 138601 gttgccctgggaagactcgctttcgctacggctccggtgg-----gttcccttaaccagg 138655 Query: 205 ccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatcacttccc 264 || | |||||| ||||||||||||||||||||||||||||||||||||||||| | | Sbjct: 138656 ccgccgcctataagtcgccggctcattcttcaacaggcacgcggtcagagatccaattct 138715 Query: 265 cctcccactgcttgggagctcagcacggtttcacgttctatttcactacccactgggggt 324 |||||||||||| ||||||| ||||||||| ||||||||||||| ||| ||||||| Sbjct: 138716 cctcccactgctcgggagct---tacggtttcatgttctatttcactccccgatgggggt 138772 Query: 325 tc 326 || Sbjct: 138773 tc 138774 Score = 238 bits (120), Expect = 9e-60 Identities = 212/242 (87%), Gaps = 8/242 (3%) Strand = Plus / Minus Query: 85 atccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgaca 144 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 83336 atccaagcttcatcctggtcatggatagatcacccgggttcgggtccataagcagcgaca 83277 Query: 145 atcgccctattaagactcgctttcgctacggctccggtgggttccgttcccttaaccaag 204 | ||||| ||||||||||||||||||||||||||||| ||||||||||||| | Sbjct: 83276 gttgccctgggaagactcgctttcgctacggctccggtgg-----gttcccttaaccagg 83222 Query: 205 ccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatcacttccc 264 || | |||||| ||||||||||||||||||||||||||||||||||||||||| | | Sbjct: 83221 ccgccgcctataagtcgccggctcattcttcaacaggcacgcggtcagagatccaattct 83162 Query: 265 cctcccactgcttgggagctcagcacggtttcacgttctatttcactacccactgggggt 324 |||||||||||| ||||||| ||||||||| ||||||||||||| ||| ||||||| Sbjct: 83161 cctcccactgctcgggagct---tacggtttcatgttctatttcactccccgatgggggt 83105 Query: 325 tc 326 || Sbjct: 83104 tc 83103
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 232 bits (117), Expect = 6e-58 Identities = 164/177 (92%), Gaps = 7/177 (3%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 751 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 692 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggc-tccggtgggttccgttccctt 197 |||||||| |||||| ||||||||||||||||||||| |||||||| |||||||| Sbjct: 691 gtgacaattgccctacgaagactcgctttcgctacggcttccggtgg-----gttccctt 637 Query: 198 aaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag 254 |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 636 aaccaagccacttcctatgagtcgccggctcatt-ttcaacaggcacgcgttcagag 581 Score = 56.0 bits (28), Expect = 7e-05 Identities = 54/62 (87%), Gaps = 3/62 (4%) Strand = Plus / Minus Query: 265 cctcccactgcttgggagctcagcacggtttcacgttctatttcactacccactgggggt 324 |||||||||||||||||||| | |||||||| ||||||||||||| ||| ||||||| Sbjct: 559 cctcccactgcttgggagctta---cggtttcatgttctatttcactccccgatgggggt 503 Query: 325 tc 326 || Sbjct: 502 tc 501
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 232 bits (117), Expect = 6e-58 Identities = 163/177 (92%), Gaps = 6/177 (3%) Strand = Plus / Minus Query: 80 gtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcag 139 |||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 732 gtttcacccaagcttcatcctggccatggatagatcacccgggttcgggtccataagcag 673 Query: 140 tgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttcccttaa 199 ||||||||||||| || ||||||||||||||||||||||||||| ||||||||| Sbjct: 672 tgacaatcgccctgtt-agactcgctttcgctacggctccggtg-----aattcccttaa 619 Query: 200 ccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagat 256 ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 618 ccacgccactgcctataagtcgccggctcattcttcaacaggcacgcggtcagagat 562
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 228 bits (115), Expect = 9e-57 Identities = 161/175 (92%), Gaps = 6/175 (3%) Strand = Plus / Plus Query: 82 ttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtg 141 |||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||| Sbjct: 124535 ttcacccaagcttcatcctggccatggatagatcacccgggttcgggtccataagcagtg 124594 Query: 142 acaatcgccctattaagactcgctttcgctacggctccggtgggttccgttcccttaacc 201 ||||||||||| || ||||||||||||||||||||||||||| ||||||||||| Sbjct: 124595 acaatcgccctgtt-agactcgctttcgctacggctccggtg-----aattcccttaacc 124648 Query: 202 aagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagat 256 | |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 124649 acgccactgcctataagtcgccggctcattcttcaacaggcacgcggtcagagat 124703 Score = 228 bits (115), Expect = 9e-57 Identities = 161/175 (92%), Gaps = 6/175 (3%) Strand = Plus / Minus Query: 82 ttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtg 141 |||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||| Sbjct: 95331 ttcacccaagcttcatcctggccatggatagatcacccgggttcgggtccataagcagtg 95272 Query: 142 acaatcgccctattaagactcgctttcgctacggctccggtgggttccgttcccttaacc 201 ||||||||||| || ||||||||||||||||||||||||||| ||||||||||| Sbjct: 95271 acaatcgccctgtt-agactcgctttcgctacggctccggtg-----aattcccttaacc 95218 Query: 202 aagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagat 256 | |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 95217 acgccactgcctataagtcgccggctcattcttcaacaggcacgcggtcagagat 95163
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 224 bits (113), Expect = 1e-55 Identities = 162/177 (91%), Gaps = 6/177 (3%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 191 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 132 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 131 gtgacaattgccctatgaagactcgctttcgctacggctccggtgggttcc-----ctta 77 Query: 199 accaa-gccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag 254 ||||| | || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 76 accaacgtcatccgttatgagtcgccggctcattcttcaacaggcacgcggtcagag 20
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 222 bits (112), Expect = 5e-55 Identities = 161/176 (91%), Gaps = 6/176 (3%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 750 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 691 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| |||||| ||||||||||||||||||||||||| ||| ||||||||| Sbjct: 690 gtgacaattgccctacgaagactcgctttcgctacggctccgttgg-----gttccctta 636 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag 254 ||||||||||| ||||||||||| ||||||||| || |||||||||||| |||||| Sbjct: 635 accaagccacttcctatgagtcg-cggctcatttttaaacaggcacgcgttcagag 581 Score = 48.1 bits (24), Expect = 0.018 Identities = 53/62 (85%), Gaps = 3/62 (4%) Strand = Plus / Minus Query: 265 cctcccactgcttgggagctcagcacggtttcacgttctatttcactacccactgggggt 324 |||||||||||||||||||| ||||||||| ||| ||||||||| ||| ||||||| Sbjct: 559 cctcccactgcttgggagct---tacggtttcatgttttatttcactccccgatgggggt 503 Query: 325 tc 326 || Sbjct: 502 tc 501
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 220 bits (111), Expect = 2e-54 Identities = 205/233 (87%), Gaps = 5/233 (2%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 144655 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtttataagcg 144596 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| |||| | |||||||||||||||||||||||||| ||||| | |||||| Sbjct: 144595 gtgacaattgccccagcaagactcgctttcgctacggctccgg-gggtt-ctccccctta 144538 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 ||| ||||| ||||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 144537 accgggccaccgcctacaagtcgccggctcattcttcaacaggcacgcggttagagatct 144478 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcact 311 | | | |||||||||||||||||||| | |||||||| ||||||||||||| Sbjct: 144477 cattctcctcccactgcttgggagct---cgcggtttcatgttctatttcact 144428 Score = 220 bits (111), Expect = 2e-54 Identities = 205/233 (87%), Gaps = 5/233 (2%) Strand = Plus / Plus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 88196 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtttataagcg 88255 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| |||| | |||||||||||||||||||||||||| ||||| | |||||| Sbjct: 88256 gtgacaattgccccagcaagactcgctttcgctacggctccgg-gggtt-ctccccctta 88313 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 ||| ||||| ||||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 88314 accgggccaccgcctacaagtcgccggctcattcttcaacaggcacgcggttagagatct 88373 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcact 311 | | | |||||||||||||||||||| | |||||||| ||||||||||||| Sbjct: 88374 cattctcctcccactgcttgggagct---cgcggtttcatgttctatttcact 88423
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 220 bits (111), Expect = 2e-54 Identities = 161/176 (91%), Gaps = 5/176 (2%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 751 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 692 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| |||||| ||||||||||||||||||||||||||||||||| || ||| Sbjct: 691 gtgacaattgccctacgaagactcgctttcgctacggctccggtgggttc----ccgtta 636 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag 254 ||||||||||||| ||||| ||| ||| ||||| ||||||||||||||| |||||| Sbjct: 635 accaagccactgcttatgattcg-cgggtcatttttcaacaggcacgcgttcagag 581 Score = 50.1 bits (25), Expect = 0.004 Identities = 42/47 (89%), Gaps = 3/47 (6%) Strand = Plus / Minus Query: 265 cctcccactgcttgggagctcagcacggtttcacgttctatttcact 311 |||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 559 cctcccactgcttgggagct---tacggtttcatgttctatttcact 516
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 210 bits (106), Expect = 2e-51 Identities = 212/245 (86%), Gaps = 8/245 (3%) Strand = Plus / Minus Query: 82 ttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtg 141 |||| |||||||||| ||||| ||||| |||||||||| ||||||||||||||||||||| Sbjct: 729 ttcacccaagcttcaccctggccatggttagatcacccgggttcgggtccataagcagtg 670 Query: 142 acaatcgccctattaagactcgctttcgctacggctccggtgggttccgttcccttaacc 201 ||| |||||||| |||||||||||||||||||||||| || ||| | |||||||| Sbjct: 669 acattcgccctagaaagactcgctttcgctacggctcc---ggcttc--tcgccttaacc 615 Query: 202 aagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatcactt 261 | |||||||||||| |||||||||||||||||||||||||||||||||||||||| | | Sbjct: 614 aggccactgcctataagtcgccggctcattcttcaacaggcacgcggtcagagattccat 555 Query: 262 ccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccactggg 321 | ||||||||||||||| ||| ||||||||| ||||||||||||| ||| |||| Sbjct: 554 tctcctcccactgcttggaggct---tacggtttcatgttctatttcactccccgatggg 498 Query: 322 ggttc 326 ||||| Sbjct: 497 ggttc 493
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 210 bits (106), Expect = 2e-51 Identities = 212/245 (86%), Gaps = 8/245 (3%) Strand = Plus / Minus Query: 82 ttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtg 141 |||| |||||||||| ||||| ||||| |||||||||| ||||||||||||||||||||| Sbjct: 742 ttcacccaagcttcaccctggccatggttagatcacccgggttcgggtccataagcagtg 683 Query: 142 acaatcgccctattaagactcgctttcgctacggctccggtgggttccgttcccttaacc 201 ||| |||||||| |||||||||||||||||||||||| || ||| | |||||||| Sbjct: 682 acattcgccctagaaagactcgctttcgctacggctcc---ggcttc--tcgccttaacc 628 Query: 202 aagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatcactt 261 | |||||||||||| |||||||||||||||||||||||||||||||||||||||| | | Sbjct: 627 aggccactgcctataagtcgccggctcattcttcaacaggcacgcggtcagagattccat 568 Query: 262 ccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccactggg 321 | ||||||||||||||| ||| ||||||||| ||||||||||||| ||| |||| Sbjct: 567 tctcctcccactgcttggaggct---tacggtttcatgttctatttcactccccgatggg 511 Query: 322 ggttc 326 ||||| Sbjct: 510 ggttc 506
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 206 bits (104), Expect = 3e-50 Identities = 213/246 (86%), Gaps = 10/246 (4%) Strand = Plus / Minus Query: 82 ttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtg 141 |||| |||||||||| ||||| ||||| |||||||||| ||||||||||||||||||||| Sbjct: 846 ttcacccaagcttcaccctggccatggttagatcacccgggttcgggtccataagcagtg 787 Query: 142 acaatcgccctattaagactcgctttcgctacggctccggtgggttc-cgttcccttaac 200 ||| |||||||| |||||||||||||||||||||||| || ||| || ||||||| Sbjct: 786 acattcgccctagaaagactcgctttcgctacggctcc---ggcttcacg---ccttaac 733 Query: 201 caagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatcact 260 || |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 732 caggccactgcctataagtcgccggctcattcttcaacaggcacgcggtcagagattcca 673 Query: 261 tccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccactgg 320 | | ||||||||||||||| ||| ||||||||| ||||||||||||| ||| ||| Sbjct: 672 ttctcctcccactgcttggaggct---tacggtttcatgttctatttcactccccgatgg 616 Query: 321 gggttc 326 |||||| Sbjct: 615 gggttc 610
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 202 bits (102), Expect = 5e-49 Identities = 132/142 (92%), Gaps = 5/142 (3%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 728 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 669 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 668 gtgacaattgccctatgaagactcgctttcgctacggctccggtgg-----gttccctta 614 Query: 199 accaagccactgcctatgagtc 220 ||||||||||| ||||||||| Sbjct: 613 accaagccacttactatgagtc 592 Score = 48.1 bits (24), Expect = 0.018 Identities = 53/62 (85%), Gaps = 3/62 (4%) Strand = Plus / Minus Query: 265 cctcccactgcttgggagctcagcacggtttcacgttctatttcactacccactgggggt 324 |||||||||||||||||||| ||||||||| ||| ||||||||| ||| ||||||| Sbjct: 559 cctcccactgcttgggagct---tacggtttcatgttttatttcactccccgatgggggt 503 Query: 325 tc 326 || Sbjct: 502 tc 501
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 202 bits (102), Expect = 5e-49 Identities = 154/170 (90%), Gaps = 1/170 (0%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| |||||||||| |||||||||||||| |||||||||| Sbjct: 4774 ccaagcttcatcctggccatggttagatcacccgggttcgggtccatagacagtgacaat 4715 Query: 147 cgccctattaagactcgctttcgctacggctccggtgggttccgttcccttaaccaagcc 206 |||||| |||||| |||||||||| ||||||||||| | |||||||||||||||| Sbjct: 4714 agccctaaaaagacttgctttcgctatggctccggtggataat-ttcccttaaccaagcc 4656 Query: 207 actgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagat 256 ||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 4655 actgcctatgagtcgccggctcattcttcaacaggcacgcggtcaaagat 4606
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 202 bits (102), Expect = 5e-49 Identities = 154/170 (90%), Gaps = 1/170 (0%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| |||||||||| |||||||||||||| |||||||||| Sbjct: 741 ccaagcttcatcctggccatggttagatcacccgggttcgggtccatagacagtgacaat 682 Query: 147 cgccctattaagactcgctttcgctacggctccggtgggttccgttcccttaaccaagcc 206 |||||| |||||| |||||||||| ||||||||||| | |||||||||||||||| Sbjct: 681 agccctaaaaagacttgctttcgctatggctccggtggataat-ttcccttaaccaagcc 623 Query: 207 actgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagat 256 ||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 622 actgcctatgagtcgccggctcattcttcaacaggcacgcggtcaaagat 573
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 202 bits (102), Expect = 5e-49 Identities = 154/170 (90%), Gaps = 1/170 (0%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| |||||||||| |||||||||||||| |||||||||| Sbjct: 741 ccaagcttcatcctggccatggttagatcacccgggttcgggtccatagacagtgacaat 682 Query: 147 cgccctattaagactcgctttcgctacggctccggtgggttccgttcccttaaccaagcc 206 |||||| |||||| |||||||||| ||||||||||| | |||||||||||||||| Sbjct: 681 agccctaaaaagacttgctttcgctatggctccggtggataat-ttcccttaaccaagcc 623 Query: 207 actgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagat 256 ||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 622 actgcctatgagtcgccggctcattcttcaacaggcacgcggtcaaagat 573
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 198 bits (100), Expect = 8e-48 Identities = 214/248 (86%), Gaps = 8/248 (3%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| | |||||||||||||| ||||| |||||||||| |||||||||| ||| || Sbjct: 731 agtttcaccaaagcttcatcctggccatggttagatcacccgggttcgggtctatagaca 672 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||| ||||||||||||||||||||||||||| ||||||||| || || || ||| Sbjct: 671 gtgaca-tcgccctattaagactcgctttcgctatggctccggt---ttttgtacc-tta 617 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 ||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 616 acctagccactgcctataagtcgccggctcattcttcaataggcacgcggtcagagatca 557 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 || |||||||||||||| |||| ||||||||| ||||||||||||| ||| | Sbjct: 556 aaacctcctcccactgcttgtaagct---tacggtttcatgttctatttcactccccgat 500 Query: 319 gggggttc 326 |||||||| Sbjct: 499 gggggttc 492
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 198 bits (100), Expect = 8e-48 Identities = 214/248 (86%), Gaps = 8/248 (3%) Strand = Plus / Plus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| | |||||||||||||| ||||| |||||||||| |||||||||| ||| || Sbjct: 114931 agtttcaccaaagcttcatcctggccatggttagatcacccgggttcgggtctatagaca 114990 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||| ||||||||||||||||||||||||||| ||||||||| || || || ||| Sbjct: 114991 gtgaca-tcgccctattaagactcgctttcgctatggctccggt---ttttgtacc-tta 115045 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 ||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 115046 acctagccactgcctataagtcgccggctcattcttcaataggcacgcggtcagagatca 115105 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 || |||||||||||||| |||| ||||||||| ||||||||||||| ||| | Sbjct: 115106 aaacctcctcccactgcttgtaagct---tacggtttcatgttctatttcactccccgat 115162 Query: 319 gggggttc 326 |||||||| Sbjct: 115163 gggggttc 115170 Score = 198 bits (100), Expect = 8e-48 Identities = 214/248 (86%), Gaps = 8/248 (3%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| | |||||||||||||| ||||| |||||||||| |||||||||| ||| || Sbjct: 87057 agtttcaccaaagcttcatcctggccatggttagatcacccgggttcgggtctatagaca 86998 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||| ||||||||||||||||||||||||||| ||||||||| || || || ||| Sbjct: 86997 gtgaca-tcgccctattaagactcgctttcgctatggctccggt---ttttgtacc-tta 86943 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatca 258 ||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 86942 acctagccactgcctataagtcgccggctcattcttcaataggcacgcggtcagagatca 86883 Query: 259 cttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccact 318 || |||||||||||||| |||| ||||||||| ||||||||||||| ||| | Sbjct: 86882 aaacctcctcccactgcttgtaagct---tacggtttcatgttctatttcactccccgat 86826 Query: 319 gggggttc 326 |||||||| Sbjct: 86825 gggggttc 86818
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 198 bits (100), Expect = 8e-48 Identities = 155/172 (90%), Gaps = 6/172 (3%) Strand = Plus / Minus Query: 80 gtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcag 139 |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||| Sbjct: 732 gtttcacccaagcttcatcctggtcatggatagatcacccgggttcgggtccataaacag 673 Query: 140 tgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttcccttaa 199 ||||||||||||| |||||| |||||||||| |||| |||||| ||||||||| Sbjct: 672 tgacaatcgccct-gaaagacttgctttcgctatggcttcggtgg-----attcccttaa 619 Query: 200 ccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 ||| |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 618 ccatgccactgcctataagtcgccggctcattcttcaacaggcacgcggtca 567
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 198 bits (100), Expect = 8e-48 Identities = 155/172 (90%), Gaps = 6/172 (3%) Strand = Plus / Minus Query: 80 gtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcag 139 |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||| Sbjct: 3766 gtttcacccaagcttcatcctggtcatggatagatcacccgggttcgggtccataaacag 3707 Query: 140 tgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttcccttaa 199 ||||||||||||| |||||| |||||||||| |||| |||||| ||||||||| Sbjct: 3706 tgacaatcgccct-gaaagacttgctttcgctatggcttcggtgg-----attcccttaa 3653 Query: 200 ccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 ||| |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 3652 ccatgccactgcctataagtcgccggctcattcttcaacaggcacgcggtca 3601
>gb|DQ160149.1| Taraxacum officinale To116-3 mRNA, partial sequence Length = 187 Score = 196 bits (99), Expect = 3e-47 Identities = 108/111 (97%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 56 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttcc 189 |||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 55 gtgacaattgccctatgaagactcgctttcgctacggctccggtgggttcc 5
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 196 bits (99), Expect = 3e-47 Identities = 108/111 (97%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 agtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 653 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttcc 189 |||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 652 gtgacaattgccctatgaagactcgctttcgctacggctccggtgggttcc 602
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 194 bits (98), Expect = 1e-46 Identities = 206/240 (85%), Gaps = 9/240 (3%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 725 ccaagcttcatcctggtcatggatagatcacccgggttcgggtccataaacagtgacaat 666 Query: 147 cgccctattaagactcgctttcgctacggctccggtgggttccgttcccttaaccaagcc 206 |||||| |||||| |||||||||| |||| |||||| |||||||||||| ||| Sbjct: 665 cgccct-gaaagacttgctttcgctatggcttcggtgg-----attcccttaaccatgcc 612 Query: 207 actgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatcacttccccc 266 ||||||||| ||||||||||||||||||||||||||||||||||| || | ||| || Sbjct: 611 actgcctataagtcgccggctcattcttcaacaggcacgcggtcaaaggttcaatcctcc 552 Query: 267 tcccactgcttgggagctcagcacggtttcacgttctatttcactacccactgggggttc 326 |||||||||||| |||| | ||||||| ||||||||||||| ||| ||||||||| Sbjct: 551 tcccactgcttgaaagct---tatggtttcatgttctatttcactcccctatgggggttc 495
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 180 bits (91), Expect = 2e-42 Identities = 156/176 (88%), Gaps = 5/176 (2%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||| |||||||||||||||| ||||||||||| |||||||| |||||||| Sbjct: 749 agtttcaaccaaatttcatcctggtcatggttagatcacccaagttcgggtacataagca 690 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 ||||| | ||||||| |||||| |||||||||| ||||||||||| |||| ||||| Sbjct: 689 atgacatttgccctatgaagacttgctttcgctatggctccggtgg-ttcc----cctta 635 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag 254 |||| |||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 634 accaggccactacttatgagtcgccggctcattcttcaacaggcacgcggtcagag 579
>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0490D09 Length = 154430 Score = 174 bits (88), Expect = 1e-40 Identities = 100/104 (96%) Strand = Plus / Plus Query: 223 cggctcattcttcaacaggcacgcggtcagagatcacttccccctcccactgcttgggag 282 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 107458 cggctcattcttcaacaggcacgcggtcagagatcactttcccctcccactgcttgggag 107517 Query: 283 ctcagcacggtttcacgttctatttcactacccactgggggttc 326 |||||||| |||||||||||||||||||||||| || ||||||| Sbjct: 107518 ctcagcactgtttcacgttctatttcactaccccctaggggttc 107561
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 165 bits (83), Expect = 1e-37 Identities = 154/176 (87%), Gaps = 5/176 (2%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||| |||||| ||||||||| ||||||||||| ||||||||||||||||| Sbjct: 736 agtttcaaccaaatttcatcttggtcatggttagatcacccaagttcgggtccataagca 677 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 ||||| | ||||||| |||||| |||||||||| | ||||||||| |||| ||||| Sbjct: 676 atgacatttgccctatgaagacttgctttcgctatgactccggtgg-ttcc----cctta 622 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag 254 ||||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| Sbjct: 621 accaagccactacttatgagtcgccggctcattcttcaacaggaacgcagtcagag 566
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 165 bits (83), Expect = 1e-37 Identities = 127/139 (91%), Gaps = 7/139 (5%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcaccca--ggttcgggtccataag 136 ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 747 agtttcacccaagcttcatcctggtcatggatagatcaccccagggttcgggtccataag 688 Query: 137 cagtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccc- 195 |||||||||| ||||||| |||||||||||||||||||| ||||||||| |||||| Sbjct: 687 cagtgacaattgccctatgaagactcgctttcgctacggttccggtggg----gttccct 632 Query: 196 ttaaccaagccactgccta 214 ||||||||||||||||||| Sbjct: 631 ttaaccaagccactgccta 613
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 163 bits (82), Expect = 4e-37 Identities = 155/178 (87%), Gaps = 1/178 (0%) Strand = Plus / Minus Query: 79 agtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagca 138 ||||||| |||||||||||||||| ||||| |||||||||| |||||||||||||| || Sbjct: 744 agtttcacccaagcttcatcctggccatggttagatcacccgggttcgggtccatagaca 685 Query: 139 gtgacaatcgccctattaagactcgctttcgctacggctccggtgggttccgttccctta 198 |||||||| ||||| |||||| |||||||||| |||||| || | | |||||||| Sbjct: 684 gtgacaatagccctgaaaagacttgctttcgctatggctccagt-gcataaattccctta 626 Query: 199 accaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagat 256 ||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 625 acccagccactatctatgagtcgccggctcattcttcaacaggcacgcggtcaaagat 568
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 159 bits (80), Expect = 7e-36 Identities = 145/165 (87%), Gaps = 5/165 (3%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 ||||| |||||||||| ||||| |||||||| | |||||||||||||||| |||||||| Sbjct: 192588 ccaagattcatcctggccatggttagatcactcgggttcgggtccataagaagtgacaag 192529 Query: 147 cgccctattaagactcgctttcgctacggctccggtgggttccgttcccttaaccaagcc 206 ||||||||| ||||| ||||||||| ||||||||| || || ||||||||||||| Sbjct: 192528 cgccctattcagacttgctttcgctttggctccggt--att---ttaccttaaccaagcc 192474 Query: 207 actgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 ||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 192473 actccctataagtcgccggctcattcttcaacaggcacgcggtca 192429 Score = 159 bits (80), Expect = 7e-36 Identities = 145/165 (87%), Gaps = 5/165 (3%) Strand = Plus / Plus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 ||||| |||||||||| ||||| |||||||| | |||||||||||||||| |||||||| Sbjct: 144194 ccaagattcatcctggccatggttagatcactcgggttcgggtccataagaagtgacaag 144253 Query: 147 cgccctattaagactcgctttcgctacggctccggtgggttccgttcccttaaccaagcc 206 ||||||||| ||||| ||||||||| ||||||||| || || ||||||||||||| Sbjct: 144254 cgccctattcagacttgctttcgctttggctccggt--att---ttaccttaaccaagcc 144308 Query: 207 actgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 ||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 144309 actccctataagtcgccggctcattcttcaacaggcacgcggtca 144353
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 159 bits (80), Expect = 7e-36 Identities = 147/168 (87%), Gaps = 6/168 (3%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgac--a 144 |||||||||||||||||||||| |||||||||| ||||||||||||||| |||||| | Sbjct: 792 ccaagcttcatcctggtcatggttagatcacccgggttcgggtccataaaaagtgacaaa 733 Query: 145 atcgccctattaagactcgctttcgctacggctccggtgggttccgttcccttaaccaag 204 ||||||||||||||||| ||||||||| |||||||| | ||| ||||||||||| Sbjct: 732 atcgccctattaagacttgctttcgctctggctccggatgattc----tccttaaccaag 677 Query: 205 ccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcag 252 ||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 676 ccactttttataagtcgccggctcattcttcaacaggcacgcggtcag 629
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 157 bits (79), Expect = 3e-35 Identities = 121/135 (89%), Gaps = 5/135 (3%) Strand = Plus / Plus Query: 120 aggttcgggtccataagcagtgacaatcgccctattaagactcgctttcgctacggctcc 179 ||||||||||||||||||||||| ||| |||| ||| ||||||||||||||| |||||| Sbjct: 3120 aggttcgggtccataagcagtgagaattgccccattctgactcgctttcgctatggctcc 3179 Query: 180 ggtgggttccgttcccttaaccaagccactgcctatgagtcgccggctcattcttcaaca 239 |||||||||| ||||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 3180 ggtgggttcc-----cttaaccaagccactgcctatgagtcgtcggctcattcttcaata 3234 Query: 240 ggcacgcggtcagag 254 || |||||||||||| Sbjct: 3235 ggtacgcggtcagag 3249
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 153 bits (77), Expect = 4e-34 Identities = 150/175 (85%), Gaps = 7/175 (4%) Strand = Plus / Minus Query: 82 ttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtg 141 |||| |||||||||| ||||| |||||||||||||||| ||||||||||||||| ||||| Sbjct: 1133 ttcacccaagcttcaccctggccatggatagatcacccgggttcgggtccataaacagtg 1074 Query: 142 acaatcgccctattaagactcgctttcgctacggctccggtgggttccgttcccttaacc 201 ||| |||||| | |||||||||||||||||||| |||| | ||||||||| Sbjct: 1073 acatgcgcccttgaatgactcgctttcgctacggcttcggt-------atacccttaacc 1021 Query: 202 aagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagat 256 | |||||||| ||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 1020 aggccactgcttataagtcgccggctcattcttcaacaggcacgcggtcaaagat 966
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 143 bits (72), Expect = 4e-31 Identities = 143/165 (86%), Gaps = 5/165 (3%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 ||||| |||||||||| ||||| |||||||| ||||||||||||||||| |||||||| Sbjct: 757 ccaagattcatcctggccatggttagatcactcaggttcgggtccataaaaagtgacaag 698 Query: 147 cgccctattaagactcgctttcgctacggctccggtgggttccgttcccttaaccaagcc 206 ||||||||| ||||| ||||||||| |||||| || || || ||||||||||||| Sbjct: 697 cgccctattcagacttgctttcgctttggctcc---ggctt--tttgccttaaccaagcc 643 Query: 207 actgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 ||| ||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 642 actccctataagtcgccggctcattcttcaacaggcatgcggtca 598
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 141 bits (71), Expect = 2e-30 Identities = 139/160 (86%), Gaps = 5/160 (3%) Strand = Plus / Minus Query: 95 catcctggtcatggatagatcacccaggttcgggtccataagcagtgacaatcgccctat 154 |||||||||||||| ||||||||||| ||||||||||| ||||| ||||| | |||||| Sbjct: 708 catcctggtcatggttagatcacccaagttcgggtccacaagcaatgacattttccctat 649 Query: 155 taagactcgctttcgctacggctccggtgggttccgttcccttaaccaagccactgccta 214 |||||| |||||||||| ||||||||||| |||| ||||||||| |||||| | || Sbjct: 648 gaagacttgctttcgctatggctccggtgg-ttcc----ccttaaccaggccactactta 594 Query: 215 tgagtcgccggctcattcttcaacaggcacgcggtcagag 254 |||||||||| ||||||||||||| |||||| |||||||| Sbjct: 593 tgagtcgccgactcattcttcaacgggcacgtggtcagag 554
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 141 bits (71), Expect = 2e-30 Identities = 194/231 (83%), Gaps = 13/231 (5%) Strand = Plus / Minus Query: 99 ctggtcatggatagatcacccaggttcgggtccataagcagtgacaatc---gccctatt 155 |||| ||||||||||||| || |||||||||||||||| |||||| || |||||||| Sbjct: 705 ctggccatggatagatcatcccggttcgggtccataagaagtgaccattaatgccctatt 646 Query: 156 aagactcgctttcgctacggctccggtgggttccgttcccttaaccaagccactgcctat 215 |||||||||||||||| |||||||| | | | |||||||||||||||| ||||| Sbjct: 645 cagactcgctttcgctatggctccggatgaat----ttccttaaccaagccacttcctat 590 Query: 216 gagtcgccggctcattcttcaacaggcacgcggtcagagatcacttccccctcccactgc 275 ||||||||||||||||||||||||||||||||||||| || |||| ||||||||||| Sbjct: 589 aagtcgccggctcattcttcaacaggcacgcggtcaga-at--cttcttcctcccactgc 533 Query: 276 ttgggagctcagcacggtttcacgttctatttcactacccactgggggttc 326 ||| ||| | |||||||| |||||||||||||| ||| | |||||||| Sbjct: 532 ttgtcagc---ggacggtttcgcgttctatttcactcccctccgggggttc 485
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 137 bits (69), Expect = 2e-29 Identities = 116/130 (89%), Gaps = 5/130 (3%) Strand = Plus / Minus Query: 197 taaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagat 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 497 taaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag-- 440 Query: 257 cacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactaccca 316 | || | |||||||||||||||||||| ||||||||| ||||||||||||| ||| Sbjct: 439 ccctggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccg 383 Query: 317 ctgggggttc 326 ||||||||| Sbjct: 382 atgggggttc 373
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 131 bits (66), Expect = 2e-27 Identities = 113/127 (88%), Gaps = 5/127 (3%) Strand = Plus / Plus Query: 200 ccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatcac 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct: 1 ccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag--ccc 58 Query: 260 ttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccactg 319 | | |||||||||||||||||||| ||||||||| ||||||||||||| ||| || Sbjct: 59 tggctcctcccactgcttgggagct---tacggtttcatgttctatttcactccccgatg 115 Query: 320 ggggttc 326 ||||||| Sbjct: 116 ggggttc 122
>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence Length = 282 Score = 127 bits (64), Expect = 2e-26 Identities = 112/126 (88%), Gaps = 4/126 (3%) Strand = Plus / Minus Query: 201 caagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatcact 260 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct: 278 caagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag-ccccg 220 Query: 261 tccccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccactgg 320 |||||||||||||||||||||| ||||||||| ||||||||||||| ||| ||| Sbjct: 219 ggcccctcccactgcttgggagct---tacggtttcatgttctatttcactccccgatgg 163 Query: 321 gggttc 326 |||||| Sbjct: 162 gggttc 157
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 125 bits (63), Expect = 9e-26 Identities = 87/95 (91%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||| Sbjct: 137212 ccaagcttcatcctggtcatggttagatcacccgggttcgggtccataagaagtgacaaa 137153 Query: 147 cgccctattaagactcgctttcgctacggctccgg 181 ||||||||| ||||| ||||||||| |||||||| Sbjct: 137152 cgccctattcagacttgctttcgcttaggctccgg 137118 Score = 125 bits (63), Expect = 9e-26 Identities = 87/95 (91%) Strand = Plus / Plus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||| Sbjct: 48332 ccaagcttcatcctggtcatggttagatcacccgggttcgggtccataagaagtgacaaa 48391 Query: 147 cgccctattaagactcgctttcgctacggctccgg 181 ||||||||| ||||| ||||||||| |||||||| Sbjct: 48392 cgccctattcagacttgctttcgcttaggctccgg 48426 Score = 83.8 bits (42), Expect = 3e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||||||||||||||| ||||| ||||||| ||||||||||||||||| ||||||||| Sbjct: 137110 ccttaaccaagccactccctataagtcgccagctcattcttcaacaggaacgcggtca 137053 Score = 83.8 bits (42), Expect = 3e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||||||||||||||| ||||| ||||||| ||||||||||||||||| ||||||||| Sbjct: 48434 ccttaaccaagccactccctataagtcgccagctcattcttcaacaggaacgcggtca 48491
>gb|L42858.1|CRECPRGOLA Chlamydomonas gigantea large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2888 Score = 125 bits (63), Expect = 9e-26 Identities = 141/164 (85%), Gaps = 6/164 (3%) Strand = Plus / Minus Query: 91 gcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaa--tcg 148 |||||||| ||||||||| |||||||||| |||||||||||||| | |||||| ||| Sbjct: 769 gcttcatcttggtcatggttagatcacccgggttcgggtccataggaagtgacgtgttcg 710 Query: 149 ccctattaagactcgctttcgctacggctccggtgggttccgttcccttaaccaagccac 208 |||| || ||||||||||||||| |||||||| | || | ||| ||||||||||||| Sbjct: 709 ccctcttcagactcgctttcgctccggctccg---gatttcactcc-ttaaccaagccac 654 Query: 209 tgcctatgagtcgccggctcattcttcaacaggcacgcggtcag 252 | ||||| ||||||||||||||||||||| |||||||||||||| Sbjct: 653 tccctataagtcgccggctcattcttcaataggcacgcggtcag 610 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 289 acggtttcacgttctatttcactaccca 316 ||||||||| ||||||||||||| |||| Sbjct: 576 acggtttcatgttctatttcactcccca 549
>emb|AM084273.1| Paulinella chromatophora plastid 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain M 0880 Length = 4934 Score = 125 bits (63), Expect = 9e-26 Identities = 142/165 (86%), Gaps = 5/165 (3%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| |||||||||| |||||||||| |||| | |||| || Sbjct: 2935 ccaagcttcatcctggccatggttagatcacccgggttcgggtctataaatactgaccat 2876 Query: 147 cgccctattaagactcgctttcgctacggctccggtgggttccgttcccttaaccaagcc 206 ||||||||| ||||||||||||||| |||||||| | |||| ||||||||| ||| Sbjct: 2875 cgccctattcagactcgctttcgctgtggctccgg-gatttcc---cccttaacc-tgcc 2821 Query: 207 actgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 | | ||||| |||||||||||||||||||||||||||| |||||| Sbjct: 2820 agtacctataagtcgccggctcattcttcaacaggcacacggtca 2776 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 cacggtttcacgttctatttcact 311 |||||||||| ||||||||||||| Sbjct: 2742 cacggtttcatgttctatttcact 2719
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 123 bits (62), Expect = 4e-25 Identities = 138/163 (84%), Gaps = 4/163 (2%) Strand = Plus / Minus Query: 89 aagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaatcg 148 |||||||||||||||||||| |||||||||| ||||||||||||||| |||||| | Sbjct: 872 aagcttcatcctggtcatggttagatcacccgggttcgggtccataaagagtgacctgag 813 Query: 149 ccctattaagactcgctttcgctacggctccggtgggttccgttcccttaaccaagccac 208 ||||||||||||| ||||||||| |||||| || | || ||||||||||||||| Sbjct: 812 ccctattaagacttgctttcgctttggctcc----ggatttttttccttaaccaagccac 757 Query: 209 tgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 | ||| ||||||||||||||||||||||||||| ||||||| Sbjct: 756 tctttataagtcgccggctcattcttcaacaggcatgcggtca 714
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 121 bits (61), Expect = 1e-24 Identities = 147/175 (84%), Gaps = 8/175 (4%) Strand = Plus / Minus Query: 82 ttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtg 141 |||| ||||| |||| ||||| |||||||||||||||| |||||||||| |||| ||||| Sbjct: 685 ttcacccaagtttcaccctggccatggatagatcacccgggttcgggtctataaacagtg 626 Query: 142 acaatcgccctattaagactcgctttcgctacggctccggtgggttccgttcccttaacc 201 ||| |||| || | |||| ||||||||||||||||| || ||| ||||||| Sbjct: 625 acatgcgccaaat-atgacttgctttcgctacggctccagta-------ttctcttaacc 574 Query: 202 aagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagat 256 | |||||| | ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 573 aggccactacttataagtcgccggctcattcttcaacaggcacgcggtcagagat 519
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 119 bits (60), Expect = 6e-24 Identities = 144/169 (85%), Gaps = 6/169 (3%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| |||||||||| ||||||||||| ||| |||||| || Sbjct: 702 ccaagcttcatcctggccatggttagatcacccgggttcgggtccctaaaaagtgacgat 643 Query: 147 c--gccctattaagactcgctttcgctacggctccggtgggttccgttcccttaaccaag 204 |||||||| ||||| ||||||||| |||| ||| | ||| |||||||||||| Sbjct: 642 tttgccctattcagacttgctttcgctttggcttcgg-gtaatcc---cccttaaccaag 587 Query: 205 ccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 ||||| | || |||||||||||||||||||||||||||||||||||||| Sbjct: 586 ccacttcttaggagtcgccggctcattcttcaacaggcacgcggtcaga 538
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 115 bits (58), Expect = 9e-23 Identities = 85/94 (90%) Strand = Plus / Minus Query: 89 aagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaatcg 148 |||||||||||||||||||| |||||||||| ||||||||||||||||||| |||| || Sbjct: 715 aagcttcatcctggtcatggttagatcacccgggttcgggtccataagcagggacatacg 656 Query: 149 ccctattaagactcgctttcgctacggctccggt 182 ||||||| ||||| ||||||||| ||||||||| Sbjct: 655 ccctattcagacttgctttcgctctggctccggt 622 Score = 111 bits (56), Expect = 1e-21 Identities = 59/60 (98%) Strand = Plus / Minus Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 615 ccttaaccaagccactgcctataagtcgccggctcattcttcaacaggcacgcggtcaga 556
>emb|Z15152.1|CHCPRRNL Chloroplast Chlamydomonas pitschmannii rrnL gene Length = 3017 Score = 115 bits (58), Expect = 9e-23 Identities = 88/97 (90%), Gaps = 2/97 (2%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgac--a 144 |||||||||||||||| |||| ||||||||||| |||||||||||||||| |||||| Sbjct: 814 ccaagcttcatcctggccatgaatagatcacccgggttcgggtccataagaagtgacttt 755 Query: 145 atcgccctattaagactcgctttcgctacggctccgg 181 ||||||||||||||||| |||||||||| |||||||| Sbjct: 754 atcgccctattaagacttgctttcgctaaggctccgg 718 Score = 77.8 bits (39), Expect = 2e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcag 252 |||||||| |||||| ||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 709 ccttaaccttgccactccctataagtcgcaggctcattcttcaacaggcacgcggtcag 651
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 113 bits (57), Expect = 4e-22 Identities = 84/93 (90%) Strand = Plus / Plus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| |||||||||| |||||||||| |||| || |||||| Sbjct: 2138066 ccaagcttcatcctggccatggttagatcacccgggttcgggtctataaacactgacaag 2138125 Query: 147 cgccctattaagactcgctttcgctacggctcc 179 ||||||||| |||||||||||||||| |||||| Sbjct: 2138126 cgccctattcagactcgctttcgctatggctcc 2138158 Score = 113 bits (57), Expect = 4e-22 Identities = 84/93 (90%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| |||||||||| |||||||||| |||| || |||||| Sbjct: 476794 ccaagcttcatcctggccatggttagatcacccgggttcgggtctataaacactgacaag 476735 Query: 147 cgccctattaagactcgctttcgctacggctcc 179 ||||||||| |||||||||||||||| |||||| Sbjct: 476734 cgccctattcagactcgctttcgctatggctcc 476702 Score = 71.9 bits (36), Expect = 1e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 204 gccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||| ||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 2138178 gccagtgcctataagtcgccggctcattcttcaacaggcacacggtca 2138225 Score = 71.9 bits (36), Expect = 1e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 204 gccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||| ||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 476682 gccagtgcctataagtcgccggctcattcttcaacaggcacacggtca 476635 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 cacggtttcacgttctatttcact 311 |||||||||| ||||||||||||| Sbjct: 2138259 cacggtttcatgttctatttcact 2138282 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 cacggtttcacgttctatttcact 311 |||||||||| ||||||||||||| Sbjct: 476601 cacggtttcatgttctatttcact 476578
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 113 bits (57), Expect = 4e-22 Identities = 84/93 (90%) Strand = Plus / Plus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| |||||||||| |||||||||| |||| || |||||| Sbjct: 1775763 ccaagcttcatcctggccatggttagatcacccgggttcgggtctataaacactgacaaa 1775822 Query: 147 cgccctattaagactcgctttcgctacggctcc 179 ||||||||| |||||||||||||||| |||||| Sbjct: 1775823 cgccctattcagactcgctttcgctatggctcc 1775855 Score = 113 bits (57), Expect = 4e-22 Identities = 84/93 (90%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| |||||||||| |||||||||| |||| || |||||| Sbjct: 376306 ccaagcttcatcctggccatggttagatcacccgggttcgggtctataaacactgacaaa 376247 Query: 147 cgccctattaagactcgctttcgctacggctcc 179 ||||||||| |||||||||||||||| |||||| Sbjct: 376246 cgccctattcagactcgctttcgctatggctcc 376214 Score = 71.9 bits (36), Expect = 1e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 204 gccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||| ||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 1775875 gccagtgcctataagtcgccggctcattcttcaacaggcacacggtca 1775922 Score = 71.9 bits (36), Expect = 1e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 204 gccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||| ||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 376194 gccagtgcctataagtcgccggctcattcttcaacaggcacacggtca 376147 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 cacggtttcacgttctatttcact 311 |||||||||| ||||||||||||| Sbjct: 1775956 cacggtttcatgttctatttcact 1775979 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 cacggtttcacgttctatttcact 311 |||||||||| ||||||||||||| Sbjct: 376113 cacggtttcatgttctatttcact 376090
>gb|AY033308.1| Uncultured Synechococcus sp. MB11E09 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4137 Score = 113 bits (57), Expect = 4e-22 Identities = 84/93 (90%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| |||||||||| |||||||||| |||| || |||||| Sbjct: 2968 ccaagcttcatcctggccatggttagatcacccgggttcgggtctataaacactgacaaa 2909 Query: 147 cgccctattaagactcgctttcgctacggctcc 179 ||||||||| |||||||||||||||| |||||| Sbjct: 2908 cgccctattcagactcgctttcgctatggctcc 2876 Score = 71.9 bits (36), Expect = 1e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 204 gccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||| ||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 2856 gccagtgcctataagtcgccggctcattcttcaacaggcacacggtca 2809 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 cacggtttcacgttctatttcact 311 |||||||||| ||||||||||||| Sbjct: 2775 cacggtttcatgttctatttcact 2752
>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7 Length = 348071 Score = 113 bits (57), Expect = 4e-22 Identities = 84/93 (90%) Strand = Plus / Plus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| |||||||||| |||||||||| |||| || |||| || Sbjct: 5882 ccaagcttcatcctggccatggttagatcacccgggttcgggtctataaacactgacgat 5941 Query: 147 cgccctattaagactcgctttcgctacggctcc 179 ||||||||| |||||||||||||||| |||||| Sbjct: 5942 cgccctattcagactcgctttcgctatggctcc 5974 Score = 71.9 bits (36), Expect = 1e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 204 gccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||| ||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 5994 gccagtgcctataagtcgccggctcattcttcaacaggcacacggtca 6041
>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7 Length = 349391 Score = 113 bits (57), Expect = 4e-22 Identities = 84/93 (90%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| |||||||||| |||||||||| |||| || |||| || Sbjct: 211890 ccaagcttcatcctggccatggttagatcacccgggttcgggtctataaacactgacgat 211831 Query: 147 cgccctattaagactcgctttcgctacggctcc 179 ||||||||| |||||||||||||||| |||||| Sbjct: 211830 cgccctattcagactcgctttcgctatggctcc 211798 Score = 71.9 bits (36), Expect = 1e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 204 gccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||| ||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 211778 gccagtgcctataagtcgccggctcattcttcaacaggcacacggtca 211731
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7 Length = 349122 Score = 113 bits (57), Expect = 4e-22 Identities = 84/93 (90%) Strand = Plus / Plus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| |||||||||| |||||||||| |||| || |||||| Sbjct: 339317 ccaagcttcatcctggccatggttagatcacccgggttcgggtctataaacactgacaag 339376 Query: 147 cgccctattaagactcgctttcgctacggctcc 179 ||||||||| |||||||||||||||| |||||| Sbjct: 339377 cgccctattcagactcgctttcgctatggctcc 339409 Score = 113 bits (57), Expect = 4e-22 Identities = 84/93 (90%) Strand = Plus / Plus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| |||||||||| |||||||||| |||| || |||||| Sbjct: 132377 ccaagcttcatcctggccatggttagatcacccgggttcgggtctataaacactgacaag 132436 Query: 147 cgccctattaagactcgctttcgctacggctcc 179 ||||||||| |||||||||||||||| |||||| Sbjct: 132437 cgccctattcagactcgctttcgctatggctcc 132469 Score = 71.9 bits (36), Expect = 1e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 204 gccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||| ||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 339429 gccagtgcctataagtcgccggctcattcttcaacaggcacacggtca 339476 Score = 71.9 bits (36), Expect = 1e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 204 gccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||| ||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 132489 gccagtgcctataagtcgccggctcattcttcaacaggcacacggtca 132536 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 cacggtttcacgttctatttcact 311 |||||||||| ||||||||||||| Sbjct: 339510 cacggtttcatgttctatttcact 339533 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 cacggtttcacgttctatttcact 311 |||||||||| ||||||||||||| Sbjct: 132570 cacggtttcatgttctatttcact 132593
>gb|DQ313008.1| Uncultured bacterium clone 3O7D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 113 bits (57), Expect = 4e-22 Identities = 84/93 (90%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| |||||||||| |||||||||| |||| || |||||| Sbjct: 578 ccaagcttcatcctggccatggttagatcacccgggttcgggtctataaacactgacaaa 519 Query: 147 cgccctattaagactcgctttcgctacggctcc 179 ||||||||| |||||||||||||||| |||||| Sbjct: 518 cgccctattcagactcgctttcgctatggctcc 486 Score = 71.9 bits (36), Expect = 1e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 204 gccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||| ||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 466 gccagtgcctataagtcgccggctcattcttcaacaggcacacggtca 419 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 cacggtttcacgttctatttcact 311 |||||||||| ||||||||||||| Sbjct: 385 cacggtttcatgttctatttcact 362
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 113 bits (57), Expect = 4e-22 Identities = 84/93 (90%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| |||||||||| |||||||||| |||| || |||||| Sbjct: 577 ccaagcttcatcctggccatggttagatcacccgggttcgggtctataaacactgacaaa 518 Query: 147 cgccctattaagactcgctttcgctacggctcc 179 ||||||||| |||||||||||||||| |||||| Sbjct: 517 cgccctattcagactcgctttcgctatggctcc 485 Score = 71.9 bits (36), Expect = 1e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 204 gccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||| ||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 465 gccagtgcctataagtcgccggctcattcttcaacaggcacacggtca 418 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 cacggtttcacgttctatttcact 311 |||||||||| ||||||||||||| Sbjct: 384 cacggtttcatgttctatttcact 361
>gb|DQ312949.1| Uncultured bacterium clone 3M6B 23S ribosomal RNA gene, partial sequence Length = 806 Score = 113 bits (57), Expect = 4e-22 Identities = 84/93 (90%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| |||||||||| |||||||||| |||| || |||||| Sbjct: 577 ccaagcttcatcctggccatggttagatcacccgggttcgggtctataaacactgacaaa 518 Query: 147 cgccctattaagactcgctttcgctacggctcc 179 ||||||||| |||||||||||||||| |||||| Sbjct: 517 cgccctattcagactcgctttcgctatggctcc 485 Score = 71.9 bits (36), Expect = 1e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 204 gccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||| ||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 465 gccagtgcctataagtcgccggctcattcttcaacaggcacacggtca 418 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 cacggtttcacgttctatttcact 311 |||||||||| ||||||||||||| Sbjct: 384 cacggtttcatgttctatttcact 361
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 113 bits (57), Expect = 4e-22 Identities = 84/93 (90%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| |||||||||| |||||||||| |||| || |||||| Sbjct: 577 ccaagcttcatcctggccatggttagatcacccgggttcgggtctataaacactgacaaa 518 Query: 147 cgccctattaagactcgctttcgctacggctcc 179 ||||||||| |||||||||||||||| |||||| Sbjct: 517 cgccctattcagactcgctttcgctatggctcc 485 Score = 71.9 bits (36), Expect = 1e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 204 gccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||| ||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 465 gccagtgcctataagtcgccggctcattcttcaacaggcacacggtca 418 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 cacggtttcacgttctatttcact 311 |||||||||| ||||||||||||| Sbjct: 384 cacggtttcatgttctatttcact 361
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 113 bits (57), Expect = 4e-22 Identities = 84/93 (90%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| |||||||||| |||||||||| |||| || |||||| Sbjct: 577 ccaagcttcatcctggccatggttagatcacccgggttcgggtctataaacactgacaaa 518 Query: 147 cgccctattaagactcgctttcgctacggctcc 179 ||||||||| |||||||||||||||| |||||| Sbjct: 517 cgccctattcagactcgctttcgctatggctcc 485 Score = 71.9 bits (36), Expect = 1e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 204 gccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||| ||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 465 gccagtgcctataagtcgccggctcattcttcaacaggcacacggtca 418 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 cacggtttcacgttctatttcact 311 |||||||||| ||||||||||||| Sbjct: 384 cacggtttcatgttctatttcact 361
>gb|DQ312633.1| Uncultured bacterium clone 3C6G 23S ribosomal RNA gene, partial sequence Length = 807 Score = 113 bits (57), Expect = 4e-22 Identities = 84/93 (90%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| |||||||||| |||||||||| |||| || |||||| Sbjct: 578 ccaagcttcatcctggccatggttagatcacccgggttcgggtctataaacactgacaaa 519 Query: 147 cgccctattaagactcgctttcgctacggctcc 179 ||||||||| |||||||||||||||| |||||| Sbjct: 518 cgccctattcagactcgctttcgctatggctcc 486 Score = 71.9 bits (36), Expect = 1e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 204 gccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||| ||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 466 gccagtgcctataagtcgccggctcattcttcaacaggcacacggtca 419 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 cacggtttcacgttctatttcact 311 |||||||||| ||||||||||||| Sbjct: 385 cacggtttcatgttctatttcact 362
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 113 bits (57), Expect = 4e-22 Identities = 84/93 (90%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| |||||||||| |||||||||| |||| || |||||| Sbjct: 577 ccaagcttcatcctggccatggttagatcacccgggttcgggtctataaacactgacaaa 518 Query: 147 cgccctattaagactcgctttcgctacggctcc 179 ||||||||| |||||||||||||||| |||||| Sbjct: 517 cgccctattcagactcgctttcgctatggctcc 485 Score = 71.9 bits (36), Expect = 1e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 204 gccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||| ||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 465 gccagtgcctataagtcgccggctcattcttcaacaggcacacggtca 418 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 cacggtttcacgttctatttcact 311 |||||||||| ||||||||||||| Sbjct: 384 cacggtttcatgttctatttcact 361
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 113 bits (57), Expect = 4e-22 Identities = 84/93 (90%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| |||||||||| |||||||||| |||| || |||||| Sbjct: 577 ccaagcttcatcctggccatggttagatcacccgggttcgggtctataaacactgacaaa 518 Query: 147 cgccctattaagactcgctttcgctacggctcc 179 ||||||||| |||||||||||||||| |||||| Sbjct: 517 cgccctattcagactcgctttcgctatggctcc 485 Score = 71.9 bits (36), Expect = 1e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 204 gccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||| ||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 465 gccagtgcctataagtcgccggctcattcttcaacaggcacacggtca 418 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 cacggtttcacgttctatttcact 311 |||||||||| ||||||||||||| Sbjct: 384 cacggtttcatgttctatttcact 361
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 113 bits (57), Expect = 4e-22 Identities = 84/93 (90%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| ||||||||| |||||||||| |||| || |||||| Sbjct: 356193 ccaagcttcatcctggccatggttagatcaccagggttcgggtctataaacactgacaaa 356134 Query: 147 cgccctattaagactcgctttcgctacggctcc 179 |||||||||||||||||||||||||| |||||| Sbjct: 356133 cgccctattaagactcgctttcgctatggctcc 356101 Score = 71.9 bits (36), Expect = 1e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 204 gccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||| ||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 356081 gccagtgcctataagtcgccggctcattcttcaacaggcacacggtca 356034 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 cacggtttcacgttctatttcact 311 |||||||||| ||||||||||||| Sbjct: 356000 cacggtttcatgttctatttcact 355977
>emb|AL731638.3|OSJN00283 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0116K07, complete sequence Length = 130779 Score = 111 bits (56), Expect = 1e-21 Identities = 62/64 (96%) Strand = Plus / Plus Query: 263 cccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccactgggg 322 ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 53075 cccctaccactgcttgggagctcagcacggtttcatgttctatttcactacccactgggg 53134 Query: 323 gttc 326 |||| Sbjct: 53135 gttc 53138
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 111 bits (56), Expect = 1e-21 Identities = 87/96 (90%), Gaps = 1/96 (1%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| |||| ||||||||||| |||||||||||||||| ||||||||| Sbjct: 743 ccaagcttcatcctggccatgaatagatcacccgggttcgggtccataagaagtgacaat 684 Query: 147 -cgccctattaagactcgctttcgctacggctccgg 181 ||||||||| ||||| ||||||||| |||||||| Sbjct: 683 acgccctattcagacttgctttcgcttgggctccgg 648 Score = 81.8 bits (41), Expect = 1e-12 Identities = 47/49 (95%) Strand = Plus / Minus Query: 203 agccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 ||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 629 agccacttcctataagtcgccggctcattcttcaacaggcacgcggtca 581 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 289 acggtttcacgttctatttcactaccca 316 ||||||||| ||||||||||||| |||| Sbjct: 545 acggtttcatgttctatttcactcccca 518
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 111 bits (56), Expect = 1e-21 Identities = 88/98 (89%), Gaps = 3/98 (3%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 ||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||| || Sbjct: 741 ccaagcttcatcctggtcatgaatagatcacccgggttcgggtccataagaagtgaccat 682 Query: 147 ---cgccctattaagactcgctttcgctacggctccgg 181 ||||||||| ||||||||||||||| |||||||| Sbjct: 681 ttgcgccctattcagactcgctttcgcttgggctccgg 644 Score = 83.8 bits (42), Expect = 3e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 635 ccttaacccggccacttcctataagtcgccggctcattcttcaacaggcacgcggtca 578 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 289 acggtttcacgttctatttcactaccca 316 ||||||||| ||||||||||||| |||| Sbjct: 545 acggtttcatgttctatttcactcccca 518
>gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast large subunit ribosomal RNA (rrnL) gene Length = 5575 Score = 111 bits (56), Expect = 1e-21 Identities = 89/100 (89%), Gaps = 5/100 (5%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgac--- 143 ||||||||||||||||||||| |||||||||| |||||||||||||| | |||||| Sbjct: 861 ccaagcttcatcctggtcatgattagatcacccgggttcgggtccataggaagtgactct 802 Query: 144 --aatcgccctattaagactcgctttcgctacggctccgg 181 ||||||||||||||||||||||||||||| |||||||| Sbjct: 801 ttaatcgccctattaagactcgctttcgctaaggctccgg 762 Score = 77.8 bits (39), Expect = 2e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcag 252 |||||||| |||||| ||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 753 ccttaaccttgccacttcctataagtcgctggctcattcttcaacaggcacgcggtcag 695
>emb|X68923.1|CHCSRRNX1 Chloroplast Chlamydomonas sp. 66.72 rrnL gene, exon 1 Length = 1218 Score = 111 bits (56), Expect = 1e-21 Identities = 89/100 (89%), Gaps = 5/100 (5%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgac--- 143 ||||||||||||||||||||| |||||||||| |||||||||||||| | |||||| Sbjct: 861 ccaagcttcatcctggtcatgattagatcacccgggttcgggtccataggaagtgactct 802 Query: 144 --aatcgccctattaagactcgctttcgctacggctccgg 181 ||||||||||||||||||||||||||||| |||||||| Sbjct: 801 ttaatcgccctattaagactcgctttcgctaaggctccgg 762 Score = 77.8 bits (39), Expect = 2e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcag 252 |||||||| |||||| ||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 753 ccttaaccttgccacttcctataagtcgctggctcattcttcaacaggcacgcggtcag 695
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 111 bits (56), Expect = 1e-21 Identities = 87/96 (90%), Gaps = 1/96 (1%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| |||| ||||||||||| |||||||||||||||| ||||||||| Sbjct: 743 ccaagcttcatcctggccatgaatagatcacccgggttcgggtccataagaagtgacaat 684 Query: 147 -cgccctattaagactcgctttcgctacggctccgg 181 ||||||||| ||||| ||||||||| |||||||| Sbjct: 683 acgccctattcagacttgctttcgcttgggctccgg 648 Score = 81.8 bits (41), Expect = 1e-12 Identities = 47/49 (95%) Strand = Plus / Minus Query: 203 agccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 ||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 629 agccacttcctataagtcgccggctcattcttcaacaggcacgcggtca 581 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 289 acggtttcacgttctatttcactaccca 316 ||||||||| ||||||||||||| |||| Sbjct: 545 acggtttcatgttctatttcactcccca 518
>emb|AL606604.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0014K14, complete sequence Length = 150187 Score = 111 bits (56), Expect = 1e-21 Identities = 62/64 (96%) Strand = Plus / Plus Query: 263 cccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccactgggg 322 ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 118835 cccctaccactgcttgggagctcagcacggtttcatgttctatttcactacccactgggg 118894 Query: 323 gttc 326 |||| Sbjct: 118895 gttc 118898
>gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA-Ile, tRNA-Ala, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast Length = 5026 Score = 109 bits (55), Expect = 6e-21 Identities = 139/165 (84%), Gaps = 4/165 (2%) Strand = Plus / Minus Query: 89 aagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaatcg 148 |||||||| ||||| ||||| ||||||| || |||||||||| |||| ||||||||| || Sbjct: 2463 aagcttcaacctggccatggttagatcatccgggttcgggtctataaccagtgacaaacg 2404 Query: 149 ccctattaagactcgctttcgctacggctccggtgggttccgttcccttaaccaagccac 208 ||||||| || ||||||||| ||| ||||||||| || | |||||||| ||||| Sbjct: 2403 ccctattcaggctcgctttcactatggctccggtattctc---taccttaacct-gccac 2348 Query: 209 tgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 | | ||| |||||||||||||||||||||||||||||| |||||| Sbjct: 2347 tacttataagtcgccggctcattcttcaacaggcacgcagtcaga 2303
>gb|AY033297.1| Uncultured Synechococcus sp. MB11A04 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4141 Score = 107 bits (54), Expect = 2e-20 Identities = 85/94 (90%), Gaps = 1/94 (1%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| |||||||||| |||||||||| |||| || |||||| Sbjct: 2965 ccaagcttcatcctggccatggttagatcacccgggttcgggtctataaacactgacaaa 2906 Query: 147 cgccctatt-aagactcgctttcgctacggctcc 179 ||||||||| ||||||||||||||||| |||||| Sbjct: 2905 cgccctattcaagactcgctttcgctatggctcc 2872 Score = 61.9 bits (31), Expect = 1e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 217 agtcgccggctcattcttcaacaggcacgcggtca 251 |||||||||||||||||||||||||||| |||||| Sbjct: 2838 agtcgccggctcattcttcaacaggcacacggtca 2804 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 cacggtttcacgttctatttcact 311 |||||||||| ||||||||||||| Sbjct: 2770 cacggtttcatgttctatttcact 2747
>gb|AY584525.1| Plectonema terebrans strain CCAP 1463-4 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 107 bits (54), Expect = 2e-20 Identities = 135/160 (84%), Gaps = 4/160 (2%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| |||||||||| |||||||||| |||| || |||| | Sbjct: 343 ccaagcttcatcctggacatggttagatcacccgggttcgggtctataaacactgactaa 284 Query: 147 cgccctattaagactcgctttcgctacggctccggtgggttccgttcccttaaccaagcc 206 ||||||||| ||||||| |||| || |||| | ||||| | ||||||||| ||| Sbjct: 283 cgccctattcagactcggtttccctttggcttc---gggtttattccccttaacc-tgcc 228 Query: 207 actgcctatgagtcgccggctcattcttcaacaggcacgc 246 | ||||||| |||||||||||||||||||||||||||||| Sbjct: 227 agtgcctataagtcgccggctcattcttcaacaggcacgc 188 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 cacggtttcacgttctatttcact 311 |||||||||| ||||||||||||| Sbjct: 149 cacggtttcatgttctatttcact 126
>emb|X68893.1|CHCIRRNX1 Chloroplast Chlamydomonas indica rrnL gene, exon 1 Length = 810 Score = 107 bits (54), Expect = 2e-20 Identities = 84/93 (90%), Gaps = 2/93 (2%) Strand = Plus / Minus Query: 91 gcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgac--aatcg 148 |||||||||||| |||| ||||||||||| |||||||||||||||| |||||| ||| Sbjct: 788 gcttcatcctggccatgaatagatcacccgggttcgggtccataagaagtgactttgtcg 729 Query: 149 ccctattaagactcgctttcgctacggctccgg 181 |||||||||||||||||||||||| |||||||| Sbjct: 728 ccctattaagactcgctttcgctaaggctccgg 696 Score = 69.9 bits (35), Expect = 5e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcag 252 |||||||| |||||| ||||| |||||| | ||||||||||||||||||||||||||| Sbjct: 687 ccttaaccttgccactccctataagtcgcagactcattcttcaacaggcacgcggtcag 629
>emb|X68913.1|CHCMRRNX1 Chloroplast C.moewusii rrnL gene, exon 1 Length = 1119 Score = 107 bits (54), Expect = 2e-20 Identities = 84/93 (90%), Gaps = 2/93 (2%) Strand = Plus / Minus Query: 91 gcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgac--aatcg 148 |||||||||||| |||| ||||||||||| |||||||||||||||| |||||| ||| Sbjct: 865 gcttcatcctggccatgaatagatcacccgggttcgggtccataagaagtgactttgtcg 806 Query: 149 ccctattaagactcgctttcgctacggctccgg 181 |||||||||||||||||||||||| |||||||| Sbjct: 805 ccctattaagactcgctttcgctaaggctccgg 773 Score = 69.9 bits (35), Expect = 5e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcag 252 |||||||| |||||| ||||| |||||| | ||||||||||||||||||||||||||| Sbjct: 764 ccttaaccttgccactccctataagtcgcagactcattcttcaacaggcacgcggtcag 706
>emb|Z17234.1|CHCERRNL Chloroplast Chlamydomonas eugametos rrnL gene Length = 8146 Score = 107 bits (54), Expect = 2e-20 Identities = 84/93 (90%), Gaps = 2/93 (2%) Strand = Plus / Minus Query: 91 gcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgac--aatcg 148 |||||||||||| |||| ||||||||||| |||||||||||||||| |||||| ||| Sbjct: 1537 gcttcatcctggccatgaatagatcacccgggttcgggtccataagaagtgactttgtcg 1478 Query: 149 ccctattaagactcgctttcgctacggctccgg 181 |||||||||||||||||||||||| |||||||| Sbjct: 1477 ccctattaagactcgctttcgctaaggctccgg 1445 Score = 69.9 bits (35), Expect = 5e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcag 252 |||||||| |||||| ||||| |||||| | ||||||||||||||||||||||||||| Sbjct: 1436 ccttaaccttgccactccctataagtcgcagactcattcttcaacaggcacgcggtcag 1378
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 107 bits (54), Expect = 2e-20 Identities = 84/93 (90%), Gaps = 2/93 (2%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgac--a 144 |||||||||||||||||||||| |||||||||| |||||||||||||||| |||||| | Sbjct: 748 ccaagcttcatcctggtcatggttagatcacccgggttcgggtccataagaagtgacgaa 689 Query: 145 atcgccctattaagactcgctttcgctacggct 177 ||||||||| |||||||||||||||| |||| Sbjct: 688 gacgccctattcagactcgctttcgctatggct 656 Score = 85.7 bits (43), Expect = 8e-14 Identities = 55/59 (93%) Strand = Plus / Minus Query: 193 cccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 ||||||||| ||||||| ||||| |||||||||||||||||||||||||||||| |||| Sbjct: 644 cccttaacctagccacttcctataagtcgccggctcattcttcaacaggcacgcagtca 586 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 289 acggtttcacgttctatttcactaccca 316 ||||||||| ||||||||||||| |||| Sbjct: 553 acggtttcatgttctatttcactcccca 526
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 105 bits (53), Expect = 9e-20 Identities = 77/85 (90%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| ||||||||| |||||||||| |||| || |||||| Sbjct: 320317 ccaagcttcatcctggccatggttagatcaccagggttcgggtctataaacactgacaaa 320258 Query: 147 cgccctattaagactcgctttcgct 171 ||||||||||||||||||||||||| Sbjct: 320257 cgccctattaagactcgctttcgct 320233 Score = 71.9 bits (36), Expect = 1e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 204 gccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||| ||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 320205 gccagtgcctataagtcgccggctcattcttcaacaggcacacggtca 320158 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 cacggtttcacgttctatttcact 311 |||||||||| ||||||||||||| Sbjct: 320124 cacggtttcatgttctatttcact 320101
>gb|AY033310.1| Uncultured Prochlorococcus sp. MB11F02 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3916 Score = 105 bits (53), Expect = 9e-20 Identities = 77/85 (90%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| ||||||||| |||||||||| |||| || |||||| Sbjct: 2740 ccaagcttcatcctggccatggttagatcaccagggttcgggtctataaacactgacaaa 2681 Query: 147 cgccctattaagactcgctttcgct 171 ||||||||||||||||||||||||| Sbjct: 2680 cgccctattaagactcgctttcgct 2656 Score = 71.9 bits (36), Expect = 1e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 204 gccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||| ||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 2628 gccagtgcctataagtcgccggctcattcttcaacaggcacacggtca 2581 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 cacggtttcacgttctatttcact 311 |||||||||| ||||||||||||| Sbjct: 2547 cacggtttcatgttctatttcact 2524
>gb|AY033307.1| Uncultured Prochlorococcus sp. MB11E08 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3917 Score = 105 bits (53), Expect = 9e-20 Identities = 77/85 (90%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| ||||||||| |||||||||| |||| || |||||| Sbjct: 2741 ccaagcttcatcctggccatggttagatcaccagggttcgggtctataaacactgacaaa 2682 Query: 147 cgccctattaagactcgctttcgct 171 ||||||||||||||||||||||||| Sbjct: 2681 cgccctattaagactcgctttcgct 2657 Score = 71.9 bits (36), Expect = 1e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 204 gccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||| ||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 2629 gccagtgcctataagtcgccggctcattcttcaacaggcacacggtca 2582 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 cacggtttcacgttctatttcact 311 |||||||||| ||||||||||||| Sbjct: 2548 cacggtttcatgttctatttcact 2525
>gb|DQ366719.1| Uncultured Prochlorococcus marinus clone ASNC729 genomic sequence Length = 38521 Score = 105 bits (53), Expect = 9e-20 Identities = 77/85 (90%) Strand = Plus / Plus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| ||||||||| |||||||||| |||| || |||||| Sbjct: 20140 ccaagcttcatcctggccatggttagatcaccagggttcgggtctataaacactgacaaa 20199 Query: 147 cgccctattaagactcgctttcgct 171 ||||||||||||||||||||||||| Sbjct: 20200 cgccctattaagactcgctttcgct 20224 Score = 71.9 bits (36), Expect = 1e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 204 gccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||| ||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 20252 gccagtgcctataagtcgccggctcattcttcaacaggcacacggtca 20299 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 cacggtttcacgttctatttcact 311 |||||||||| ||||||||||||| Sbjct: 20333 cacggtttcatgttctatttcact 20356
>gb|DQ366714.1| Uncultured Prochlorococcus marinus clone ASNC2150 genomic sequence Length = 37884 Score = 105 bits (53), Expect = 9e-20 Identities = 77/85 (90%) Strand = Plus / Plus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| ||||||||| |||||||||| |||| || |||||| Sbjct: 1894 ccaagcttcatcctggccatggttagatcaccagggttcgggtctataaacactgacaaa 1953 Query: 147 cgccctattaagactcgctttcgct 171 ||||||||||||||||||||||||| Sbjct: 1954 cgccctattaagactcgctttcgct 1978 Score = 71.9 bits (36), Expect = 1e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 204 gccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||| ||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 2006 gccagtgcctataagtcgccggctcattcttcaacaggcacacggtca 2053 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 cacggtttcacgttctatttcact 311 |||||||||| ||||||||||||| Sbjct: 2087 cacggtttcatgttctatttcact 2110
>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5 Length = 349742 Score = 105 bits (53), Expect = 9e-20 Identities = 77/85 (90%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| ||||||||| |||||||||| |||| || |||||| Sbjct: 315806 ccaagcttcatcctggccatggttagatcaccagggttcgggtctataaacactgacaaa 315747 Query: 147 cgccctattaagactcgctttcgct 171 ||||||||||||||||||||||||| Sbjct: 315746 cgccctattaagactcgctttcgct 315722 Score = 71.9 bits (36), Expect = 1e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 204 gccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||| ||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 315694 gccagtgcctataagtcgccggctcattcttcaacaggcacacggtca 315647 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 cacggtttcacgttctatttcact 311 |||||||||| ||||||||||||| Sbjct: 315613 cacggtttcatgttctatttcact 315590
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 105 bits (53), Expect = 9e-20 Identities = 77/85 (90%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| |||||||||| |||||||||| |||| || |||| || Sbjct: 1659220 ccaagcttcatcctggccatggttagatcacccgggttcgggtctataaacactgactat 1659161 Query: 147 cgccctattaagactcgctttcgct 171 ||||||||| ||||||||||||||| Sbjct: 1659160 cgccctattcagactcgctttcgct 1659136 Score = 105 bits (53), Expect = 9e-20 Identities = 77/85 (90%) Strand = Plus / Plus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| |||||||||| |||||||||| |||| || |||| || Sbjct: 1049524 ccaagcttcatcctggccatggttagatcacccgggttcgggtctataaacactgactat 1049583 Query: 147 cgccctattaagactcgctttcgct 171 ||||||||| ||||||||||||||| Sbjct: 1049584 cgccctattcagactcgctttcgct 1049608 Score = 71.9 bits (36), Expect = 1e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 204 gccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||| ||||||| |||||||||||||||||||||||||||||| |||| Sbjct: 1659108 gccagtgcctataagtcgccggctcattcttcaacaggcacgccgtca 1659061 Score = 71.9 bits (36), Expect = 1e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 204 gccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||| ||||||| |||||||||||||||||||||||||||||| |||| Sbjct: 1049636 gccagtgcctataagtcgccggctcattcttcaacaggcacgccgtca 1049683 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 cacggtttcacgttctatttcact 311 |||||||||| ||||||||||||| Sbjct: 1659027 cacggtttcatgttctatttcact 1659004 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 cacggtttcacgttctatttcact 311 |||||||||| ||||||||||||| Sbjct: 1049717 cacggtttcatgttctatttcact 1049740
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 105 bits (53), Expect = 9e-20 Identities = 83/93 (89%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| |||||||||| |||||||||| |||| | |||||| Sbjct: 564 ccaagcttcatcctggccatggttagatcacccgggttcgggtctataaatactgacaaa 505 Query: 147 cgccctattaagactcgctttcgctacggctcc 179 ||||||||| |||||||||||||||| |||||| Sbjct: 504 cgccctattcagactcgctttcgctatggctcc 472 Score = 65.9 bits (33), Expect = 8e-08 Identities = 39/41 (95%) Strand = Plus / Minus Query: 211 cctatgagtcgccggctcattcttcaacaggcacgcggtca 251 ||||| |||||||||||||||||||||||||||| |||||| Sbjct: 445 cctataagtcgccggctcattcttcaacaggcacacggtca 405 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 cacggtttcacgttctatttcact 311 |||||||||| ||||||||||||| Sbjct: 371 cacggtttcatgttctatttcact 348
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 105 bits (53), Expect = 9e-20 Identities = 83/93 (89%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| |||||||||| |||||||||| |||| | |||||| Sbjct: 564 ccaagcttcatcctggccatggttagatcacccgggttcgggtctataaatactgacaaa 505 Query: 147 cgccctattaagactcgctttcgctacggctcc 179 ||||||||| |||||||||||||||| |||||| Sbjct: 504 cgccctattcagactcgctttcgctatggctcc 472 Score = 65.9 bits (33), Expect = 8e-08 Identities = 39/41 (95%) Strand = Plus / Minus Query: 211 cctatgagtcgccggctcattcttcaacaggcacgcggtca 251 ||||| |||||||||||||||||||||||||||| |||||| Sbjct: 445 cctataagtcgccggctcattcttcaacaggcacacggtca 405 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 cacggtttcacgttctatttcact 311 |||||||||| ||||||||||||| Sbjct: 371 cacggtttcatgttctatttcact 348
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 105 bits (53), Expect = 9e-20 Identities = 83/93 (89%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| |||||||||| |||||||||| |||| | |||||| Sbjct: 564 ccaagcttcatcctggccatggttagatcacccgggttcgggtctataaatactgacaaa 505 Query: 147 cgccctattaagactcgctttcgctacggctcc 179 ||||||||| |||||||||||||||| |||||| Sbjct: 504 cgccctattcagactcgctttcgctatggctcc 472 Score = 65.9 bits (33), Expect = 8e-08 Identities = 39/41 (95%) Strand = Plus / Minus Query: 211 cctatgagtcgccggctcattcttcaacaggcacgcggtca 251 ||||| |||||||||||||||||||||||||||| |||||| Sbjct: 445 cctataagtcgccggctcattcttcaacaggcacacggtca 405 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 cacggtttcacgttctatttcact 311 |||||||||| ||||||||||||| Sbjct: 371 cacggtttcatgttctatttcact 348
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 105 bits (53), Expect = 9e-20 Identities = 56/57 (98%) Strand = Plus / Minus Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtc 250 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 618 ccttaaccaagccactgcctataagtcgccggctcattcttcaacaggcacgcggtc 562 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 89 aagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgaca 144 |||||||| ||||||||||| |||||||| | | ||||||||||||| |||||||| Sbjct: 719 aagcttcaccctggtcatggttagatcactcggattcgggtccataaacagtgaca 664
>emb|X00512.1|ANRN03 Anacystis nidulans 23S rRNA gene and flanking regions Length = 3282 Score = 105 bits (53), Expect = 9e-20 Identities = 77/85 (90%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| |||||||||| |||||||||| |||| || |||| || Sbjct: 982 ccaagcttcatcctggccatggttagatcacccgggttcgggtctataaacactgactat 923 Query: 147 cgccctattaagactcgctttcgct 171 ||||||||| ||||||||||||||| Sbjct: 922 cgccctattcagactcgctttcgct 898 Score = 71.9 bits (36), Expect = 1e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 204 gccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||| ||||||| |||||||||||||||||||||||||||||| |||| Sbjct: 870 gccagtgcctataagtcgccggctcattcttcaacaggcacgccgtca 823 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 cacggtttcacgttctatttcact 311 |||||||||| ||||||||||||| Sbjct: 789 cacggtttcatgttctatttcact 766
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 105 bits (53), Expect = 9e-20 Identities = 77/85 (90%) Strand = Plus / Plus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| |||||||||| |||||||||| |||| || |||| || Sbjct: 2657566 ccaagcttcatcctggccatggttagatcacccgggttcgggtctataaacactgactat 2657625 Query: 147 cgccctattaagactcgctttcgct 171 ||||||||| ||||||||||||||| Sbjct: 2657626 cgccctattcagactcgctttcgct 2657650 Score = 105 bits (53), Expect = 9e-20 Identities = 77/85 (90%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| |||||||||| |||||||||| |||| || |||| || Sbjct: 571355 ccaagcttcatcctggccatggttagatcacccgggttcgggtctataaacactgactat 571296 Query: 147 cgccctattaagactcgctttcgct 171 ||||||||| ||||||||||||||| Sbjct: 571295 cgccctattcagactcgctttcgct 571271 Score = 71.9 bits (36), Expect = 1e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 204 gccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||| ||||||| |||||||||||||||||||||||||||||| |||| Sbjct: 2657678 gccagtgcctataagtcgccggctcattcttcaacaggcacgccgtca 2657725 Score = 71.9 bits (36), Expect = 1e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 204 gccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||| ||||||| |||||||||||||||||||||||||||||| |||| Sbjct: 571243 gccagtgcctataagtcgccggctcattcttcaacaggcacgccgtca 571196 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 cacggtttcacgttctatttcact 311 |||||||||| ||||||||||||| Sbjct: 2657759 cacggtttcatgttctatttcact 2657782 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 cacggtttcacgttctatttcact 311 |||||||||| ||||||||||||| Sbjct: 571162 cacggtttcatgttctatttcact 571139
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 103 bits (52), Expect = 3e-19 Identities = 115/133 (86%), Gaps = 6/133 (4%) Strand = Plus / Minus Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 650 ccttaaccaagccacttcctataagtcgccggctcattcttcaacaggcacgcggtcaga 591 Query: 254 gatcacttccccctcccactgcttgggagctcagcacggtttcacgttctatttcactac 313 ||| || || |||||||||||| ||| | ||||||||| ||||||||||||| | Sbjct: 590 -atctatttcc--tcccactgcttgtcagc---ggacggtttcatgttctatttcactcc 537 Query: 314 ccactgggggttc 326 || | |||||||| Sbjct: 536 cctccgggggttc 524 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Minus Query: 78 aagtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagc 137 |||||| | ||| ||||||| |||| |||| ||||||| || |||||||||||||||| Sbjct: 787 aagttttacccatgcttcattctggccatgcctagatcatcccggttcgggtccataaga 728 Query: 138 agtgac 143 |||||| Sbjct: 727 agtgac 722
>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4181 Score = 103 bits (52), Expect = 3e-19 Identities = 78/86 (90%), Gaps = 3/86 (3%) Strand = Plus / Minus Query: 89 aagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat-- 146 |||||||| |||||||||| ||||||||||| |||||||||||||||| |||||| || Sbjct: 744 aagcttcaacctggtcatgaatagatcacccgggttcgggtccataagaagtgaccattt 685 Query: 147 -cgccctattaagactcgctttcgct 171 ||||||||||||||||||||||||| Sbjct: 684 acgccctattaagactcgctttcgct 659 Score = 93.7 bits (47), Expect = 3e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcag 252 |||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 640 ccttaacccagccacttcctataagtcgccggctcattcttcaacaggcacgcggtcag 582
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 103 bits (52), Expect = 3e-19 Identities = 87/98 (88%), Gaps = 3/98 (3%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| |||| ||||||||||| |||||||||||||||| |||||| || Sbjct: 798 ccaagcttcatcctggccatgaatagatcacccgggttcgggtccataagaagtgaccat 739 Query: 147 ---cgccctattaagactcgctttcgctacggctccgg 181 ||||||||| ||||||||||||||| |||||||| Sbjct: 738 ttacgccctattcagactcgctttcgcttgggctccgg 701 Score = 91.7 bits (46), Expect = 1e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 692 ccttaacccagccacttcctataagtcgccggctcattcttcaacaggcacgcggtca 635 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 289 acggtttcacgttctatttcactaccca 316 ||||||||| ||||||||||||| |||| Sbjct: 602 acggtttcatgttctatttcactcccca 575
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 103 bits (52), Expect = 3e-19 Identities = 87/98 (88%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| |||| ||||||||||| |||||||||||||||| |||||| || Sbjct: 151643 ccaagcttcatcctggccatgaatagatcacccgggttcgggtccataagaagtgaccat 151702 Query: 147 ---cgccctattaagactcgctttcgctacggctccgg 181 ||||||||| ||||||||||||||| |||||||| Sbjct: 151703 ttgcgccctattcagactcgctttcgcttgggctccgg 151740 Score = 103 bits (52), Expect = 3e-19 Identities = 87/98 (88%), Gaps = 3/98 (3%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| |||| ||||||||||| |||||||||||||||| |||||| || Sbjct: 42560 ccaagcttcatcctggccatgaatagatcacccgggttcgggtccataagaagtgaccat 42501 Query: 147 ---cgccctattaagactcgctttcgctacggctccgg 181 ||||||||| ||||||||||||||| |||||||| Sbjct: 42500 ttgcgccctattcagactcgctttcgcttgggctccgg 42463 Score = 91.7 bits (46), Expect = 1e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 151749 ccttaacccagccactccctataagtcgccggctcattcttcaacaggcacgcggtca 151806 Score = 91.7 bits (46), Expect = 1e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 42454 ccttaacccagccactccctataagtcgccggctcattcttcaacaggcacgcggtca 42397 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 289 acggtttcacgttctatttcactaccca 316 ||||||||| ||||||||||||| |||| Sbjct: 151839 acggtttcatgttctatttcactcccca 151866 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 289 acggtttcacgttctatttcactaccca 316 ||||||||| ||||||||||||| |||| Sbjct: 42364 acggtttcatgttctatttcactcccca 42337
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 103 bits (52), Expect = 3e-19 Identities = 58/60 (96%) Strand = Plus / Minus Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 587 ccttaaccaggccactgcctataagtcgccggctcattcttcaacaggcacgcggtcaga 528 Score = 101 bits (51), Expect = 1e-18 Identities = 90/103 (87%) Strand = Plus / Minus Query: 80 gtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcag 139 |||||| |||| ||||||||||| |||||||||||||||| ||||||||||||||| ||| Sbjct: 694 gtttcacccaaacttcatcctggccatggatagatcacccgggttcgggtccataaacag 635 Query: 140 tgacaatcgccctattaagactcgctttcgctacggctccggt 182 ||||| ||||| | || |||| |||||||||| |||| |||| Sbjct: 634 tgacattcgccttggtatgacttgctttcgctatggcttcggt 592
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 103 bits (52), Expect = 3e-19 Identities = 87/98 (88%), Gaps = 3/98 (3%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| |||| ||||||||||| |||||||||||||||| |||||| || Sbjct: 798 ccaagcttcatcctggccatgaatagatcacccgggttcgggtccataagaagtgaccat 739 Query: 147 ---cgccctattaagactcgctttcgctacggctccgg 181 ||||||||| ||||||||||||||| |||||||| Sbjct: 738 ttacgccctattcagactcgctttcgcttgggctccgg 701 Score = 91.7 bits (46), Expect = 1e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 692 ccttaacccagccacttcctataagtcgccggctcattcttcaacaggcacgcggtca 635 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 289 acggtttcacgttctatttcactaccca 316 ||||||||| ||||||||||||| |||| Sbjct: 602 acggtttcatgttctatttcactcccca 575
>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1 Length = 1965 Score = 103 bits (52), Expect = 3e-19 Identities = 78/86 (90%), Gaps = 3/86 (3%) Strand = Plus / Minus Query: 89 aagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat-- 146 |||||||| |||||||||| ||||||||||| |||||||||||||||| |||||| || Sbjct: 744 aagcttcaacctggtcatgaatagatcacccgggttcgggtccataagaagtgaccattt 685 Query: 147 -cgccctattaagactcgctttcgct 171 ||||||||||||||||||||||||| Sbjct: 684 acgccctattaagactcgctttcgct 659 Score = 93.7 bits (47), Expect = 3e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcag 252 |||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 640 ccttaacccagccacttcctataagtcgccggctcattcttcaacaggcacgcggtcag 582
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 103 bits (52), Expect = 3e-19 Identities = 87/98 (88%), Gaps = 3/98 (3%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| |||| ||||||||||| |||||||||||||||| |||||| || Sbjct: 732 ccaagcttcatcctggccatgaatagatcacccgggttcgggtccataagaagtgaccat 673 Query: 147 ---cgccctattaagactcgctttcgctacggctccgg 181 ||||||||| ||||||||||||||| |||||||| Sbjct: 672 ttgcgccctattcagactcgctttcgcttgggctccgg 635 Score = 91.7 bits (46), Expect = 1e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 626 ccttaacccagccactccctataagtcgccggctcattcttcaacaggcacgcggtca 569 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 289 acggtttcacgttctatttcactaccca 316 ||||||||| ||||||||||||| |||| Sbjct: 536 acggtttcatgttctatttcactcccca 509
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 103 bits (52), Expect = 3e-19 Identities = 135/159 (84%), Gaps = 4/159 (2%) Strand = Plus / Minus Query: 89 aagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgac-aatc 147 |||||||| ||||| ||||| |||||||||| |||||||||| |||| |||||| || | Sbjct: 2540 aagcttcaccctggccatggttagatcacccgggttcgggtctataaatagtgactaaac 2481 Query: 148 gccctattaagactcgctttcgctacggctccggtgggttccgttcccttaaccaagcca 207 || ||||||| |||||||||||||| |||||| || | | || |||||||| |||| Sbjct: 2480 gctctattaaaactcgctttcgctatggctccagtaaat--cattaccttaacc-tgcca 2424 Query: 208 ctgcctatgagtcgccggctcattcttcaacaggcacgc 246 || ||||| |||||||||||||||||||||||||||||| Sbjct: 2423 ctacctataagtcgccggctcattcttcaacaggcacgc 2385
>gb|L43541.1|PDWCPRRNL Pedinomonas tuberculata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3875 Score = 101 bits (51), Expect = 1e-18 Identities = 57/59 (96%) Strand = Plus / Minus Query: 196 ttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag 254 |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 633 ttaaccaagccacttcctataagtcgccggctcattcttcaacaggcacgcggtcagag 575 Score = 85.7 bits (43), Expect = 8e-14 Identities = 80/91 (87%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||| ||||||||||| |||||||||| |||||||||| ||| | |||| | Sbjct: 740 ccaagcttcaccctggtcatggttagatcacccgggttcgggtctatagaaaatgacga- 682 Query: 147 cgccctattaagactcgctttcgctacggct 177 ||||||||| ||||||||||||||||||||| Sbjct: 681 cgccctattcagactcgctttcgctacggct 651
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 101 bits (51), Expect = 1e-18 Identities = 82/91 (90%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| |||||||||| |||||||||| |||| |||||| | Sbjct: 725 ccaagcttcatcctggccatggttagatcacccgggttcgggtctataaaaagtgac-gt 667 Query: 147 cgccctattaagactcgctttcgctacggct 177 ||||||||| ||||||||||||||||||||| Sbjct: 666 cgccctattcagactcgctttcgctacggct 636 Score = 101 bits (51), Expect = 1e-18 Identities = 57/59 (96%) Strand = Plus / Minus Query: 196 ttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag 254 |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 618 ttaaccaagccacttcctataagtcgccggctcattcttcaacaggcacgcggtcagag 560
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 101 bits (51), Expect = 1e-18 Identities = 82/91 (90%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| |||||||||| |||||||||| |||| |||||| | Sbjct: 2607 ccaagcttcatcctggccatggttagatcacccgggttcgggtctataaaaagtgac-gt 2549 Query: 147 cgccctattaagactcgctttcgctacggct 177 ||||||||| ||||||||||||||||||||| Sbjct: 2548 cgccctattcagactcgctttcgctacggct 2518 Score = 101 bits (51), Expect = 1e-18 Identities = 57/59 (96%) Strand = Plus / Minus Query: 196 ttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagag 254 |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2500 ttaaccaagccacttcctataagtcgccggctcattcttcaacaggcacgcggtcagag 2442
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 101 bits (51), Expect = 1e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 ||||||||||| |||| ||||| |||||||||| |||||||||| ||||| | |||||| Sbjct: 2334094 ccaagcttcattctggccatggttagatcacccgggttcgggtctataagtactgacaaa 2334153 Query: 147 cgccctattaagactcgctttcgctacggct 177 ||||||||| |||||||||||||||| |||| Sbjct: 2334154 cgccctattcagactcgctttcgctatggct 2334184 Score = 65.9 bits (33), Expect = 8e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 211 cctatgagtcgccggctcattcttcaacaggcacgcggtca 251 ||||| |||||||||||||||||||||||||||||| |||| Sbjct: 2334213 cctataagtcgccggctcattcttcaacaggcacgccgtca 2334253
>gb|L42837.1|CMKCPRGOL Chamaetrichon capsulatum large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2610 Score = 99.6 bits (50), Expect = 5e-18 Identities = 83/94 (88%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 ||||| |||||||||| ||||| |||||||| | |||||||||||||||| |||||||| Sbjct: 722 ccaagtttcatcctggccatggttagatcactcgggttcgggtccataagaagtgacaaa 663 Query: 147 cgccctattaagactcgctttcgctacggctccg 180 ||||||||| ||||| ||||||||| ||||||| Sbjct: 662 cgccctattcagacttgctttcgctttggctccg 629 Score = 97.6 bits (49), Expect = 2e-17 Identities = 55/57 (96%) Strand = Plus / Minus Query: 195 cttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 619 cttaaccaagccactccctataagtcgccggctcattcttcaacaggcacgcggtca 563
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 99.6 bits (50), Expect = 5e-18 Identities = 86/97 (88%), Gaps = 2/97 (2%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgac--a 144 |||||||||||||||||||||| |||||||||| ||||||||||||||| |||||| | Sbjct: 728 ccaagcttcatcctggtcatggttagatcacccgggttcgggtccataaaaagtgacaaa 669 Query: 145 atcgccctattaagactcgctttcgctacggctccgg 181 | |||||||| ||||||||||||||| |||||||| Sbjct: 668 agtgccctattcagactcgctttcgctttggctccgg 632 Score = 83.8 bits (42), Expect = 3e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||| Sbjct: 623 ccttaaccaagccactttctataagtcgccggctcattcttcaacaggaacgcggtca 566
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 97.6 bits (49), Expect = 2e-17 Identities = 76/85 (89%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| |||||||||| |||||||||| |||| ||||||| | Sbjct: 344 ccaagcttcatcctggacatggttagatcacccgggttcgggtctataaacagtgacgaa 285 Query: 147 cgccctattaagactcgctttcgct 171 |||||| || ||||||||||||||| Sbjct: 284 cgcccttttcagactcgctttcgct 260 Score = 63.9 bits (32), Expect = 3e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 204 gccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||||||||||| | |||||||||||| ||||||||||||| |||||| Sbjct: 231 gccactgcctataactcgccggctcatgcttcaacaggcacacggtca 184
>gb|AY389861.1| Uncultured chlorophyte large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 750 Score = 97.6 bits (49), Expect = 2e-17 Identities = 82/92 (89%), Gaps = 2/92 (2%) Strand = Plus / Minus Query: 90 agcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgac--aatc 147 |||||||| |||| |||| ||||||||||| |||||||||||||||| |||||| || Sbjct: 346 agcttcattctggccatgaatagatcacccgggttcgggtccataagaagtgacttgttc 287 Query: 148 gccctattaagactcgctttcgctacggctcc 179 ||||||||||||||||||||||||| |||||| Sbjct: 286 gccctattaagactcgctttcgctaaggctcc 255 Score = 65.9 bits (33), Expect = 8e-08 Identities = 45/49 (91%) Strand = Plus / Minus Query: 204 gccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcag 252 |||||| ||||| |||||| | ||||||||||||||||||||||||||| Sbjct: 234 gccactccctataagtcgcagactcattcttcaacaggcacgcggtcag 186
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 97.6 bits (49), Expect = 2e-17 Identities = 82/93 (88%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| |||||||||| |||||||||||||| || |||| Sbjct: 742 ccaagcttcatcctggccatggttagatcacccgggttcgggtccatagacacggacata 683 Query: 147 cgccctattaagactcgctttcgctacggctcc 179 ||||||||| |||||||||||||||| |||||| Sbjct: 682 cgccctattcagactcgctttcgctatggctcc 650 Score = 85.7 bits (43), Expect = 8e-14 Identities = 104/123 (84%), Gaps = 6/123 (4%) Strand = Plus / Minus Query: 204 gccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatcacttcc 263 |||| ||||||| |||||||||||||||||||||||||||||||||||| | | || | Sbjct: 628 gccagtgcctataagtcgccggctcattcttcaacaggcacgcggtcagggct---ttac 572 Query: 264 ccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccactggggg 323 ||||||||||||||| |||| ||||||||| ||||| ||||||| ||| |||||| Sbjct: 571 ccctcccactgcttgtaagct---tacggtttcatgttctttttcactccccgatggggg 515 Query: 324 ttc 326 ||| Sbjct: 514 ttc 512
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 97.6 bits (49), Expect = 2e-17 Identities = 82/93 (88%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| |||||||||| |||||||||||||| || |||| Sbjct: 2511 ccaagcttcatcctggccatggttagatcacccgggttcgggtccatagacacggacata 2452 Query: 147 cgccctattaagactcgctttcgctacggctcc 179 ||||||||| |||||||||||||||| |||||| Sbjct: 2451 cgccctattcagactcgctttcgctatggctcc 2419 Score = 85.7 bits (43), Expect = 8e-14 Identities = 104/123 (84%), Gaps = 6/123 (4%) Strand = Plus / Minus Query: 204 gccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatcacttcc 263 |||| ||||||| |||||||||||||||||||||||||||||||||||| | | || | Sbjct: 2397 gccagtgcctataagtcgccggctcattcttcaacaggcacgcggtcagggct---ttac 2341 Query: 264 ccctcccactgcttgggagctcagcacggtttcacgttctatttcactacccactggggg 323 ||||||||||||||| |||| ||||||||| ||||| ||||||| ||| |||||| Sbjct: 2340 ccctcccactgcttgtaagct---tacggtttcatgttctttttcactccccgatggggg 2284 Query: 324 ttc 326 ||| Sbjct: 2283 ttc 2281
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 97.6 bits (49), Expect = 2e-17 Identities = 141/168 (83%), Gaps = 4/168 (2%) Strand = Plus / Plus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||| ||||| ||||| |||||||||| |||||||||| |||| |||||||| Sbjct: 114706 ccaagcttcaccctggccatggttagatcacccgggttcgggtctataaatagtgacaaa 114765 Query: 147 -cgccctattaagactcgctttcgctacggctccggtgggttccgttcccttaaccaagc 205 ||| |||| | |||||||||||||| |||||| || | | || |||||||| || Sbjct: 114766 acgctctatacaaactcgctttcgctagggctccagtaatt--ctttaccttaacct-gc 114822 Query: 206 cactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||| ||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 114823 cactacctataagtcgccggctcattcttcaacaggcacgcagtcaga 114870 Score = 97.6 bits (49), Expect = 2e-17 Identities = 141/168 (83%), Gaps = 4/168 (2%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||| ||||| ||||| |||||||||| |||||||||| |||| |||||||| Sbjct: 2811 ccaagcttcaccctggccatggttagatcacccgggttcgggtctataaatagtgacaaa 2752 Query: 147 -cgccctattaagactcgctttcgctacggctccggtgggttccgttcccttaaccaagc 205 ||| |||| | |||||||||||||| |||||| || | | || |||||||| || Sbjct: 2751 acgctctatacaaactcgctttcgctagggctccagtaatt--ctttaccttaacct-gc 2695 Query: 206 cactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||| ||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 2694 cactacctataagtcgccggctcattcttcaacaggcacgcagtcaga 2647
>gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-AstI gene Length = 4859 Score = 95.6 bits (48), Expect = 8e-17 Identities = 78/87 (89%), Gaps = 2/87 (2%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgaca-- 144 |||||||||||||||| ||||| ||||||| ||||||||||||||||||| | ||||| Sbjct: 729 ccaagcttcatcctggccatggttagatcatccaggttcgggtccataagaaatgacatt 670 Query: 145 atcgccctattaagactcgctttcgct 171 | ||||||||| ||||||||||||||| Sbjct: 669 agcgccctattcagactcgctttcgct 643 Score = 75.8 bits (38), Expect = 8e-11 Identities = 41/42 (97%) Strand = Plus / Minus Query: 211 cctatgagtcgccggctcattcttcaacaggcacgcggtcag 252 ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 608 cctataagtcgccggctcattcttcaacaggcacgcggtcag 567
>gb|L43538.1|CRECPRRNLA Chlamydomonas peterfii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3498 Score = 95.6 bits (48), Expect = 8e-17 Identities = 77/86 (89%), Gaps = 3/86 (3%) Strand = Plus / Minus Query: 89 aagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat-- 146 |||||||| |||||||||| ||||||||||| |||||||||||||||| |||||| || Sbjct: 784 aagcttcaacctggtcatgaatagatcacccgggttcgggtccataagaagtgaccattt 725 Query: 147 -cgccctattaagactcgctttcgct 171 ||||||||| ||||||||||||||| Sbjct: 724 acgccctattcagactcgctttcgct 699 Score = 93.7 bits (47), Expect = 3e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcag 252 |||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 680 ccttaacccagccacttcctataagtcgccggctcattcttcaacaggcacgcggtcag 622
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 95.6 bits (48), Expect = 8e-17 Identities = 87/100 (87%), Gaps = 5/100 (5%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgac--- 143 ||||||||||||||||||||| |||||||||| |||||||||||||| |||||| Sbjct: 915 ccaagcttcatcctggtcatgattagatcacccgggttcgggtccatagaaagtgactct 856 Query: 144 --aatcgccctattaagactcgctttcgctacggctccgg 181 | ||||||||||||||||||||||||||| |||||||| Sbjct: 855 ttattcgccctattaagactcgctttcgctaaggctccgg 816 Score = 83.8 bits (42), Expect = 3e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 807 ccttaaccttgccacttcctataagtcgccggctcattcttcaacaggcacgcggtca 750
>emb|X68887.1|CHCPRRNL1 Chloroplast Chlamydomonas peterfii rrnL gene, exon 1 Length = 2668 Score = 95.6 bits (48), Expect = 8e-17 Identities = 77/86 (89%), Gaps = 3/86 (3%) Strand = Plus / Minus Query: 89 aagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat-- 146 |||||||| |||||||||| ||||||||||| |||||||||||||||| |||||| || Sbjct: 784 aagcttcaacctggtcatgaatagatcacccgggttcgggtccataagaagtgaccattt 725 Query: 147 -cgccctattaagactcgctttcgct 171 ||||||||| ||||||||||||||| Sbjct: 724 acgccctattcagactcgctttcgct 699 Score = 93.7 bits (47), Expect = 3e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcag 252 |||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 680 ccttaacccagccacttcctataagtcgccggctcattcttcaacaggcacgcggtcag 622
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 93.7 bits (47), Expect = 3e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcag 252 |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| Sbjct: 170883 ccttaaccaagccactccctagaagtcgccggctcattcttcaacaggcacgcggtcag 170941 Score = 93.7 bits (47), Expect = 3e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcag 252 |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| Sbjct: 122043 ccttaaccaagccactccctagaagtcgccggctcattcttcaacaggcacgcggtcag 121985 Score = 77.8 bits (39), Expect = 2e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||||||||| |||||||||| |||||||||| || | ||||||| Sbjct: 170780 ccaagcttcatcctggtcatggttagatcacccgggttcgggtctctaggaagtgacaca 170839 Query: 147 cgccctattaagactcgctttcgctacggctccgg 181 ||||| | ||||||||||||||| |||||||| Sbjct: 170840 ggcccttatcagactcgctttcgctctggctccgg 170874 Score = 77.8 bits (39), Expect = 2e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||||||||| |||||||||| |||||||||| || | ||||||| Sbjct: 122146 ccaagcttcatcctggtcatggttagatcacccgggttcgggtctctaggaagtgacaca 122087 Query: 147 cgccctattaagactcgctttcgctacggctccgg 181 ||||| | ||||||||||||||| |||||||| Sbjct: 122086 ggcccttatcagactcgctttcgctctggctccgg 122052
>gb|L43504.1|CRECPRRNLM Chlamydomonas starrii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3455 Score = 93.7 bits (47), Expect = 3e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 ||||||||||||||||||| || |||||||||| |||||||||||||||| |||||| Sbjct: 967 ccaagcttcatcctggtcacggttagatcacccgggttcgggtccataagaagtgacttg 908 Query: 147 cgccctattaagactcgctttcgctacggctccgg 181 |||||||| ||||| ||||||||| |||||||| Sbjct: 907 agccctattcagacttgctttcgcttaggctccgg 873 Score = 79.8 bits (40), Expect = 5e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 204 gccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 855 gccacttcctataagtcgccggctcattcttcaacaggcacgcggtca 808
>gb|L43503.1|CRECPRRNLL Chlamydomonas pallidostigmatica chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CpaI, site-specific DNA endonuclease I-CpaIII, site-specific DNA endonuclease I-CpaIV, site-specific DNA endonuclease I-CpaV genes Length = 8217 Score = 93.7 bits (47), Expect = 3e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcag 252 |||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||| Sbjct: 758 ccttaaccaagccactccctataagtcgccggctcattcttcaataggcacgcggtcag 700 Score = 71.9 bits (36), Expect = 1e-09 Identities = 74/86 (86%), Gaps = 3/86 (3%) Strand = Plus / Minus Query: 99 ctggtcatggatagatcacccaggttcgggtccataagcagtgac---aatcgccctatt 155 ||||||||| |||||||||| |||||||||||||||| |||||| | | |||||||| Sbjct: 852 ctggtcatgattagatcacccgggttcgggtccataagaagtgactatatttgccctatt 793 Query: 156 aagactcgctttcgctacggctccgg 181 ||||| ||||||||| ||||||||| Sbjct: 792 cagacttgctttcgcttcggctccgg 767
>gb|L43354.1|CRECPRRNLE Chlamydomonas iyengarii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3923 Score = 93.7 bits (47), Expect = 3e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| || || |||||||||| |||||||||||||||| |||||| | Sbjct: 802 ccaagcttcatcctggccacggttagatcacccgggttcgggtccataagaagtgactgt 743 Query: 147 cgccctattaagactcgctttcgctacggctccgg 181 |||||||| ||||| ||||||||| |||||||| Sbjct: 742 agccctattcagacttgctttcgcttaggctccgg 708 Score = 79.8 bits (40), Expect = 5e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 204 gccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 690 gccacttcctataagtcgccggctcattcttcaacaggcacgcggtca 643
>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 6750 Score = 93.7 bits (47), Expect = 3e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcag 252 |||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||| Sbjct: 629 ccttaaccaagccactccctataagtcgccggctcattcttcaataggcacgcggtcag 571 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 99 ctggtcatggatagatcacccaggttcgggtccataagcagtgac 143 ||||||||| |||||||||| |||||||||||||||| |||||| Sbjct: 727 ctggtcatgattagatcacccgggttcgggtccataagaagtgac 683
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 93.7 bits (47), Expect = 3e-16 Identities = 89/103 (86%) Strand = Plus / Minus Query: 80 gtttcatccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcag 139 |||||| ||||||||| |||||| ||||| |||||||||| |||||||||| ||| || Sbjct: 726 gtttcacccaagcttcctcctggccatggttagatcacccgggttcgggtctttaacaag 667 Query: 140 tgacaatcgccctattaagactcgctttcgctacggctccggt 182 ||||| ||||||||| ||||||||||||||| ||||||||| Sbjct: 666 tgacatgcgccctattcagactcgctttcgctctggctccggt 624 Score = 85.7 bits (43), Expect = 8e-14 Identities = 55/59 (93%) Strand = Plus / Minus Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcag 252 |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 617 ccttaaccaagccacttgctaaaagtcgccggctcattcttcaacaggcacgcggtcag 559
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 93.7 bits (47), Expect = 3e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcag 252 |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| Sbjct: 634 ccttaaccaagccactccctagaagtcgccggctcattcttcaacaggcacgcggtcag 576 Score = 77.8 bits (39), Expect = 2e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||||||||| |||||||||| |||||||||| || | ||||||| Sbjct: 737 ccaagcttcatcctggtcatggttagatcacccgggttcgggtctctaggaagtgacaca 678 Query: 147 cgccctattaagactcgctttcgctacggctccgg 181 ||||| | ||||||||||||||| |||||||| Sbjct: 677 ggcccttatcagactcgctttcgctctggctccgg 643
>emb|X68899.1|CHCPRRNX1 Chloroplast Chlamydomonas pallidostigmatica rrnL gene, exon 1 Length = 2219 Score = 93.7 bits (47), Expect = 3e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcag 252 |||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||| Sbjct: 758 ccttaaccaagccactccctataagtcgccggctcattcttcaataggcacgcggtcag 700 Score = 71.9 bits (36), Expect = 1e-09 Identities = 74/86 (86%), Gaps = 3/86 (3%) Strand = Plus / Minus Query: 99 ctggtcatggatagatcacccaggttcgggtccataagcagtgac---aatcgccctatt 155 ||||||||| |||||||||| |||||||||||||||| |||||| | | |||||||| Sbjct: 852 ctggtcatgattagatcacccgggttcgggtccataagaagtgactatatttgccctatt 793 Query: 156 aagactcgctttcgctacggctccgg 181 ||||| ||||||||| ||||||||| Sbjct: 792 cagacttgctttcgcttcggctccgg 767
>emb|X68889.1|CHCSRRNL1 Chloroplast Chlamydomonas starrii rrnL gene, exon 1 Length = 2749 Score = 93.7 bits (47), Expect = 3e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 ||||||||||||||||||| || |||||||||| |||||||||||||||| |||||| Sbjct: 967 ccaagcttcatcctggtcacggttagatcacccgggttcgggtccataagaagtgacttg 908 Query: 147 cgccctattaagactcgctttcgctacggctccgg 181 |||||||| ||||| ||||||||| |||||||| Sbjct: 907 agccctattcagacttgctttcgcttaggctccgg 873 Score = 79.8 bits (40), Expect = 5e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 204 gccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 855 gccacttcctataagtcgccggctcattcttcaacaggcacgcggtca 808
>emb|X68885.1|CHCIRRNL1 Chloroplast Chlamydomonas iyengarii rrnL gene, exon 1 Length = 2676 Score = 93.7 bits (47), Expect = 3e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| || || |||||||||| |||||||||||||||| |||||| | Sbjct: 802 ccaagcttcatcctggccacggttagatcacccgggttcgggtccataagaagtgactgt 743 Query: 147 cgccctattaagactcgctttcgctacggctccgg 181 |||||||| ||||| ||||||||| |||||||| Sbjct: 742 agccctattcagacttgctttcgcttaggctccgg 708 Score = 79.8 bits (40), Expect = 5e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 204 gccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 690 gccacttcctataagtcgccggctcattcttcaacaggcacgcggtca 643
>emb|X68905.1|CHCFRRNL1 Chloroplast Chlamydomonas frankii rrnL gene, exon 1 Length = 1282 Score = 93.7 bits (47), Expect = 3e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcag 252 |||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||| Sbjct: 629 ccttaaccaagccactccctataagtcgccggctcattcttcaataggcacgcggtcag 571 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 99 ctggtcatggatagatcacccaggttcgggtccataagcagtgac 143 ||||||||| |||||||||| |||||||||||||||| |||||| Sbjct: 727 ctggtcatgattagatcacccgggttcgggtccataagaagtgac 683
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 91.7 bits (46), Expect = 1e-15 Identities = 85/97 (87%), Gaps = 2/97 (2%) Strand = Plus / Plus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgac--a 144 |||||||||| ||||| |||| ||||||| ||||||||||||||||||| |||||| Sbjct: 155490 ccaagcttcaacctggccatgattagatcatccaggttcgggtccataagaagtgactgt 155549 Query: 145 atcgccctattaagactcgctttcgctacggctccgg 181 ||||||||||| ||||||||||||||| |||||||| Sbjct: 155550 atcgccctattcagactcgctttcgcttgggctccgg 155586 Score = 91.7 bits (46), Expect = 1e-15 Identities = 85/97 (87%), Gaps = 2/97 (2%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgac--a 144 |||||||||| ||||| |||| ||||||| ||||||||||||||||||| |||||| Sbjct: 78402 ccaagcttcaacctggccatgattagatcatccaggttcgggtccataagaagtgactgt 78343 Query: 145 atcgccctattaagactcgctttcgctacggctccgg 181 ||||||||||| ||||||||||||||| |||||||| Sbjct: 78342 atcgccctattcagactcgctttcgcttgggctccgg 78306 Score = 87.7 bits (44), Expect = 2e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 155595 ccttaaccctgccacttcctataagtcgccggctcattcttcaacaggcacgcggtcaga 155654 Score = 87.7 bits (44), Expect = 2e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcaga 253 |||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 78297 ccttaaccctgccacttcctataagtcgccggctcattcttcaacaggcacgcggtcaga 78238
>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome Length = 1842899 Score = 91.7 bits (46), Expect = 1e-15 Identities = 83/94 (88%), Gaps = 1/94 (1%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgac-aa 145 |||||||||||||||| ||||| ||||||||| |||||||||| |||| || |||| || Sbjct: 1666192 ccaagcttcatcctggccatggttagatcaccagggttcgggtctataaacactgacaaa 1666133 Query: 146 tcgccctattaagactcgctttcgctacggctcc 179 ||||||||| |||||||||||||||| |||||| Sbjct: 1666132 acgccctattcagactcgctttcgctatggctcc 1666099 Score = 63.9 bits (32), Expect = 3e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 204 gccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||| ||| ||| |||||||||||||||||||||||||||| |||||| Sbjct: 1666079 gccagtgcatataagtcgccggctcattcttcaacaggcacacggtca 1666032
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 91.7 bits (46), Expect = 1e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 194 ccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtca 251 |||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||| Sbjct: 750 ccttaaccaagccactccttataagtcgccggctcattcttcaacaggcacgcggtca 693 Score = 87.7 bits (44), Expect = 2e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 87 ccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaat 146 |||||||||||||||| ||||| |||||||||| |||||||||||||||| ||||||||| Sbjct: 859 ccaagcttcatcctggccatggttagatcacccgggttcgggtccataagaagtgacaat 800 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,491,650 Number of Sequences: 3902068 Number of extensions: 2491650 Number of successful extensions: 47569 Number of sequences better than 10.0: 2153 Number of HSP's better than 10.0 without gapping: 2160 Number of HSP's successfully gapped in prelim test: 10 Number of HSP's that attempted gapping in prelim test: 40423 Number of HSP's gapped (non-prelim): 6844 length of query: 326 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 304 effective length of database: 17,147,199,772 effective search space: 5212748730688 effective search space used: 5212748730688 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
