| Clone Name | rbaet77g04 |
|---|---|
| Clone Library Name | barley_pub |
>GSCR2_DROME (Q9W3C2) Hypothetical protein CG1785| Length = 478 Score = 31.6 bits (70), Expect = 0.54 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +3 Query: 183 KFAEDRRNMRNVGSFQPDQSRSLFIIDSS 269 +F ED+R VG+F Q LF++DSS Sbjct: 31 QFLEDQRQEERVGTFADKQDEDLFVVDSS 59
>CWC2_CANGA (Q6FNR8) Pre-mRNA-splicing factor CWC2| Length = 306 Score = 28.9 bits (63), Expect = 3.5 Identities = 15/32 (46%), Positives = 21/32 (65%) Frame = +3 Query: 162 LDCNWT*KFAEDRRNMRNVGSFQPDQSRSLFI 257 LDC K AE+R +M VGSF Q+R+L++ Sbjct: 107 LDCFGREKHAENREDMAGVGSFN-QQNRTLYV 137
>DISC1_HUMAN (Q9NRI5) Disrupted in schizophrenia 1 protein| Length = 854 Score = 28.9 bits (63), Expect = 3.5 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%) Frame = -3 Query: 249 ATCSDPAGRIRHSSCSSCPQ-QISKSSCNPNFKSRVAHPKKGSH 121 A CSD A R+R + S P ++S +SC+P V GSH Sbjct: 162 AACSDGARRVR--AAGSLPSAELSSNSCSPGCGPEVPPTPPGSH 203
>PMPF_CHLMU (Q9PL46) Probable outer membrane protein pmpF precursor| (Polymorphic membrane protein F) Length = 1025 Score = 28.5 bits (62), Expect = 4.6 Identities = 13/41 (31%), Positives = 21/41 (51%) Frame = +1 Query: 79 AVITQLISYYNTINMRSFFRMSNTTFEVWIATGLRNLLRTG 201 ++ Q I+Y N N R F +S+ T + W + GL +G Sbjct: 47 SIAAQYITYANVSNYRGNFTISSCTQDQWFSRGLSTTNSSG 87
>STE2_SACKL (P12384) Pheromone alpha factor receptor| Length = 426 Score = 28.1 bits (61), Expect = 6.0 Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 5/47 (10%) Frame = -3 Query: 234 PAGRIRHSSCSSCPQQISKSSCNPNF-----KSRVAHPKKGSHVDCV 109 P R +S C+ P SK + NPN + + K G+H CV Sbjct: 351 PVSRTSNSRCNGYPNDGSKLAPNPNCVGHNGSTMSVNDKNGAHATCV 397
>FIBA_PARPA (P19477) Fibrinogen-like protein A precursor (FREP-A)| Length = 282 Score = 27.7 bits (60), Expect = 7.8 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = -3 Query: 240 SDPAGRIRHSSCSSCPQQISKS 175 +DPAGR + S SCP++IS S Sbjct: 42 ADPAGRQKRQSGLSCPKRISHS 63
>DLK_HUMAN (P80370) Delta-like protein precursor (DLK) (pG2) [Contains: Fetal| antigen 1 (FA1)] Length = 383 Score = 27.7 bits (60), Expect = 7.8 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 7/36 (19%) Frame = -3 Query: 246 TCSDPAGRIRHSSCSSCPQ-------QISKSSCNPN 160 TC D GR H+SC CP +I +SC PN Sbjct: 143 TCVDDEGRASHASC-LCPPGFSGNFCEIVANSCTPN 177 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 36,808,625 Number of Sequences: 219361 Number of extensions: 589823 Number of successful extensions: 1308 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1298 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1308 length of database: 80,573,946 effective HSP length: 71 effective length of database: 64,999,315 effective search space used: 1559983560 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)