>gb|AY111082.1| Zea mays CL35819_1 mRNA sequence
          Length = 588

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 48/52 (92%)
 Strand = Plus / Plus

                                                               
Query: 216 agcccttctgctgctcctcggccgacatcttctccttcgtcatcgtgccgac 267
           |||||||||||||||||||||||| |||||||||||| ||||| || |||||
Sbjct: 383 agcccttctgctgctcctcggccgccatcttctccttggtcattgtcccgac 434

>gb|AY104371.1| Zea mays PCO121406 mRNA sequence
          Length = 1266

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                   
Query: 212 ccggagcccttctgctgctcctcggccgacatcttctccttcgtcatcgtgccgac 267
           ||||||||||| || ||||||||||| | |||||||||||| |||||||| |||||
Sbjct: 920 ccggagcccttgtgatgctcctcggcggccatcttctccttggtcatcgtcccgac 865

>emb|AL670660.8| Mouse DNA sequence from clone RP23-265D6 on chromosome X, complete
             sequence
          Length = 181805

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 1     taacatgaaaaccccaaggtaaattc 26
             ||||||||||| ||||||||||||||
Sbjct: 54839 taacatgaaaaacccaaggtaaattc 54864

>gb|AC129330.4| Mus musculus BAC clone RP23-61B8 from chromosome 8, complete sequence
          Length = 218698

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 33     cttctacaaagagaaacaaaa 53
              |||||||||||||||||||||
Sbjct: 181908 cttctacaaagagaaacaaaa 181888

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 106      atatatctaaagttgttttct 126
                |||||||||||||||||||||
Sbjct: 30304582 atatatctaaagttgttttct 30304562

>gb|AC091751.2| Gallus gallus clone WAG-71G10, complete sequence
          Length = 120464

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 239   gacatcttctccttcgtcatcgtgc 263
             |||||||||||||||| ||||||||
Sbjct: 50751 gacatcttctccttcggcatcgtgc 50727

>emb|BX511037.9| Zebrafish DNA sequence from clone DKEY-66N24 in linkage group 1,
             complete sequence
          Length = 148544

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 37    tacaaagagaaacaaaatcct 57
             |||||||||||||||||||||
Sbjct: 75788 tacaaagagaaacaaaatcct 75768

>gb|DP000061.1| Monodelphis domestica target 117 genomic scaffold
          Length = 360990

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 134    caataaataatacaacatggc 154
              |||||||||||||||||||||
Sbjct: 106868 caataaataatacaacatggc 106848

>gb|AC092558.4| Oryza sativa chromosome 3 BAC OSJNBb0036F07 genomic sequence, complete
             sequence
          Length = 130359

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 106   atatatctaaagttgttttct 126
             |||||||||||||||||||||
Sbjct: 96262 atatatctaaagttgttttct 96242

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 106      atatatctaaagttgttttct 126
                |||||||||||||||||||||
Sbjct: 30396004 atatatctaaagttgttttct 30395984

>ref|NM_204131.1| Gallus gallus LIM domain kinase 1 (LIMK1), mRNA
          Length = 2796

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 239  gacatcttctccttcgtcatcgtgc 263
            |||||||||||||||| ||||||||
Sbjct: 1649 gacatcttctccttcggcatcgtgc 1673

>dbj|AK072451.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023120I03, full
            insert sequence
          Length = 2829

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 106  atatatctaaagttgttttct 126
            |||||||||||||||||||||
Sbjct: 2302 atatatctaaagttgttttct 2322

>dbj|AP002091.2| Homo sapiens genomic DNA, chromosome 6q25.2, clone: CITD-2058I12,
             complete sequence
          Length = 106763

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 100   tgttctatatatctaaagttgtttt 124
             |||||||||||||| ||||||||||
Sbjct: 31206 tgttctatatatctgaagttgtttt 31230

>dbj|AB073752.1| Gallus gallus limk1 mRNA for LIM kinase 1, complete cds
          Length = 2796

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 239  gacatcttctccttcgtcatcgtgc 263
            |||||||||||||||| ||||||||
Sbjct: 1649 gacatcttctccttcggcatcgtgc 1673

>gb|AE007283.1| Sinorhizobium meliloti 1021 plasmid pSymA section 89 of 121 of the
            complete plasmid sequence
          Length = 10765

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 178  tggcgatcagcggatgggcg 197
            ||||||||||||||||||||
Sbjct: 4163 tggcgatcagcggatgggcg 4182

>ref|XM_382043.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01867.1)
           partial mRNA
          Length = 1851

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 230 tcctcggccgacatcttctccttc 253
           |||||||||||| |||||||||||
Sbjct: 423 tcctcggccgacttcttctccttc 446

>ref|XM_649544.1| Entamoeba histolytica HM-1:IMSS protein kinase (48.t00015)  partial
           mRNA
          Length = 1536

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 132 accaataaataatacaacat 151
           ||||||||||||||||||||
Sbjct: 255 accaataaataatacaacat 236

>emb|CR392367.6| Zebrafish DNA sequence from clone CH211-144A4 in linkage group 24,
              complete sequence
          Length = 167553

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 34     ttctacaaagagaaacaaaa 53
              ||||||||||||||||||||
Sbjct: 158163 ttctacaaagagaaacaaaa 158144

>emb|BX276104.14| Mouse DNA sequence from clone RP24-313E3 on chromosome 4, complete
             sequence
          Length = 152376

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 129   tccaccaataaataatacaa 148
             ||||||||||||||||||||
Sbjct: 41603 tccaccaataaataatacaa 41584

>emb|AL929009.5| Zebrafish DNA sequence from clone CH211-202A8 in linkage group 24,
              complete sequence
          Length = 208279

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 34     ttctacaaagagaaacaaaa 53
              ||||||||||||||||||||
Sbjct: 169736 ttctacaaagagaaacaaaa 169755

>emb|CR854847.7| Zebrafish DNA sequence from clone DKEY-266L9 in linkage group 11,
             complete sequence
          Length = 48855

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 105   tatatatctaaagttgtttt 124
             ||||||||||||||||||||
Sbjct: 39021 tatatatctaaagttgtttt 39002

>gb|AC154192.3| Mus musculus BAC clone RP24-70F14 from chromosome 17, complete sequence
          Length = 234088

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    aaagagaaacaaaatcctgg 59
             ||||||||||||||||||||
Sbjct: 77675 aaagagaaacaaaatcctgg 77656

>emb|CT025551.9| Mouse DNA sequence from clone RP23-414I10 on chromosome 13, complete
              sequence
          Length = 196737

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 42     agagaaacaaaatcctgggt 61
              ||||||||||||||||||||
Sbjct: 191580 agagaaacaaaatcctgggt 191561


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,088,382
Number of Sequences: 3902068
Number of extensions: 3088382
Number of successful extensions: 64511
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64438
Number of HSP's gapped (non-prelim): 73
length of query: 267
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 245
effective length of database: 17,147,199,772
effective search space: 4201063944140
effective search space used: 4201063944140
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)