| Clone Name | rbaet77e08 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | emb|BX323820.4| Zebrafish DNA sequence from clone CH211-251K4 in... | 40 | 2.7 | 2 | emb|AL974308.13| Zebrafish DNA sequence from clone DKEY-29P20, c... | 40 | 2.7 | 3 | emb|CR548630.7| Zebrafish DNA sequence from clone CH211-232B12 i... | 40 | 2.7 |
|---|
>emb|BX323820.4| Zebrafish DNA sequence from clone CH211-251K4 in linkage group 4 Contains the gene for a novel protein similar to vertebrate calcium channel voltage-dependent alpha 2/delta subunit 1 (CACNA2D1) and a CpG island, complete sequence Length = 172228 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 acatttgtaatatgtctttt 192 |||||||||||||||||||| Sbjct: 34374 acatttgtaatatgtctttt 34393
>emb|AL974308.13| Zebrafish DNA sequence from clone DKEY-29P20, complete sequence Length = 180511 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 aacagatacatttgtaatat 185 |||||||||||||||||||| Sbjct: 130837 aacagatacatttgtaatat 130818
>emb|CR548630.7| Zebrafish DNA sequence from clone CH211-232B12 in linkage group 11, complete sequence Length = 117408 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 aacagatacatttgtaatat 185 |||||||||||||||||||| Sbjct: 111045 aacagatacatttgtaatat 111026 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,179,103 Number of Sequences: 3902068 Number of extensions: 2179103 Number of successful extensions: 140315 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 140306 Number of HSP's gapped (non-prelim): 9 length of query: 210 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 188 effective length of database: 17,147,199,772 effective search space: 3223673557136 effective search space used: 3223673557136 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)