ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet77e07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_469569.1| Oryza sativa (japonica cultivar-group), mRNA 62 5e-07
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 62 5e-07
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 62 5e-07
4gb|AC091532.13| Oryza sativa chromosome 3 BAC OSJNBa0078A17 geno... 62 5e-07
5dbj|AK100267.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 5e-07
6dbj|AK058421.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 5e-07
7dbj|AB047313.1| Oryza sativa (japonica cultivar-group) OsRAc1 mR... 62 5e-07
8gb|AF369906.1| Sorghum bicolor clone BAC10J22 Sbb3766 sequence 60 2e-06
9emb|AL357552.25| Human DNA sequence from clone RP4-633I8 on chro... 42 0.43
10emb|X79378.1|SVSOAC1 S.vulgare SoAc1 mRNA 42 0.43
11gb|AC016587.9| Homo sapiens chromosome 19 clone CTD-2632B17, com... 42 0.43
12dbj|AK022404.1| Homo sapiens cDNA FLJ12342 fis, clone MAMMA1002282 42 0.43
13gb|AC016134.7| Homo sapiens chromosome 15 clone RP11-380D11 map ... 42 0.43
14gb|AC005792.1|AC005792 Homo sapiens chromosome 19, BAC CIT-B-978... 42 0.43
15gb|AC139574.4| Mus musculus BAC clone RP23-477I8 from chromosome... 40 1.7
16gb|AC166333.9| Mus musculus chromosome 1, clone RP23-395A13, com... 40 1.7
17ref|XM_721449.1| Plasmodium yoelii yoelii str. 17XNL pKU-alpha p... 40 1.7
18ref|XM_737111.1| Plasmodium chabaudi chabaudi protein kinase (PC... 40 1.7
19gb|AC113085.6| Mus musculus chromosome 8, clone RP23-292P21, com... 40 1.7
20ref|XM_675300.1| Plasmodium berghei strain ANKA hypothetical pro... 40 1.7
21gb|AC163007.4| Mus musculus chromosome 1, clone RP23-421G18, com... 40 1.7
22emb|Z94056.1|HS436M11 Human DNA sequence from clone RP3-436M11 o... 40 1.7
23emb|AL512599.33| Human DNA sequence from clone RP11-115D7 on chr... 40 1.7
24gb|AC093165.5| Homo sapiens BAC clone RP11-1255P17 from 2, compl... 40 1.7
25gb|AC112957.14| Mus musculus chromosome 15, clone RP23-418C6, co... 40 1.7
26emb|AL079306.3|CNS00M8P Human chromosome 14 DNA sequence BAC R-2... 40 1.7
27ref|XM_629212.1| Dictyostelium discoideum hypothetical protein (... 38 6.8
28ref|XM_419977.1| PREDICTED: Gallus gallus similar to HS1-binding... 38 6.8
29gb|AY294256.1| Lepeophtheirus salmonis trypsin 1c mRNA, partial cds 38 6.8
30gb|AC147649.2| Homo sapiens BAC clone RP11-188B11 from UL, compl... 38 6.8
31gb|AC147234.3| Mus musculus BAC clone RP24-500F11 from chromosom... 38 6.8
32gb|AC073326.6| Homo sapiens BAC clone RP11-358A10 from 7, comple... 38 6.8
33gb|AY363103.1|AY363102S2 Mus musculus diadenosine triphosphate h... 38 6.8
34gb|AC132336.3| Mus musculus BAC clone RP24-230N9 from chromosome... 38 6.8
35gb|AC122211.4| Mus musculus BAC clone RP23-97F18 from chromosome... 38 6.8
36gb|AC122932.4| Mus musculus BAC clone RP23-16A20 from 1, complet... 38 6.8
37emb|CR456621.10| Zebrafish DNA sequence from clone DKEY-37G16 in... 38 6.8
38gb|AC124776.3| Mus musculus BAC clone RP23-89D11 from 12, comple... 38 6.8
39gb|AC113126.10| Mus musculus chromosome 6, clone RP23-352D5, com... 38 6.8
40gb|AC102431.7| Mus musculus chromosome 14, clone RP24-106J1, com... 38 6.8
41emb|AL593851.6| Human DNA sequence from clone RP11-415H23 on chr... 38 6.8
42emb|AL355495.10| Human DNA sequence from clone RP11-53N12 on chr... 38 6.8
43emb|AL121899.37|HSBA128M1 Human DNA sequence from clone RP11-128... 38 6.8
44gb|AC145212.1| Homo sapiens BAC clone RP11-1368F8 from UL, compl... 38 6.8
45emb|AL031602.14|HS1174N9 Human DNA sequence from clone RP5-1174N... 38 6.8
46emb|AL024497.5|HS283K11 Human DNA sequence from clone RP1-283K11... 38 6.8
47emb|AL031587.3|HS1039K5 Human DNA sequence from clone RP5-1039K5... 38 6.8
48gb|AC155730.9| Mus musculus 6 BAC RP24-182M11 (Roswell Park Canc... 38 6.8
49gb|AC130650.2| Homo sapiens chromosome 16 clone CTA-276F8, compl... 38 6.8
50gb|AC105420.5| Homo sapiens BAC clone RP11-593F5 from 4, complet... 38 6.8
51gb|AC026223.11| Homo sapiens chromosome 10 clone RP11-548F5, com... 38 6.8
52gb|AC083801.20| Homo sapiens 3 BAC RP11-646E18 (Roswell Park Can... 38 6.8
53gb|AC091162.9| Homo sapiens chromosome 8, clone RP11-255E13, com... 38 6.8
54gb|AC069020.8| Homo sapiens chromosome 10 clone RP11-165K20, com... 38 6.8
55gb|AC023380.9| Homo sapiens chromosome 18, clone RP11-27C7, comp... 38 6.8
56gb|AC024600.5| Homo sapiens chromosome 10 clone RP11-179K3, comp... 38 6.8
57gb|AC100783.2| Homo sapiens chromosome 18, clone RP11-141I4, com... 38 6.8
58gb|AC013746.10| Homo sapiens chromosome 8, clone RP11-131P18, co... 38 6.8
59gb|AY014864.1| Clarias gariepinus fushi tarazu factor 1-A (FTZ-F... 38 6.8
60gb|AC022872.4|AC022872 Homo sapiens chromosome 15, clone RP11-39... 38 6.8
61gb|AC108491.4| Homo sapiens BAC clone RP11-138I17 from 4, comple... 38 6.8
62gb|AC020604.9| Homo sapiens BAC clone RP11-536C12 from 2, comple... 38 6.8
63gb|AC008276.4| Homo sapiens BAC clone RP11-297I3 from 2, complet... 38 6.8
64gb|AC005495.2| Homo sapiens chromosome 17, clone RP11-293K20, co... 38 6.8
65gb|AC118591.7| Mus musculus chromosome 3, clone RP24-93G19, comp... 38 6.8
66dbj|BS000016.1| Pan troglodytes chromosome 22 clone:PTB-066F21, ... 38 6.8
67emb|X58001.1|CORPS12A Infectious bronchitis virus RNA for peplom... 38 6.8
68gb|U91322.1|HSU91322 Human chromosome 16p13 BAC clone CIT987SK-2... 38 6.8
69emb|AL163208.2|HS21C008 Homo sapiens chromosome 21 segment HS21C008 38 6.8
70gb|AF130248.1|AF130248 Homo sapiens clone 10J13 chromosome 21 ma... 38 6.8
71emb|CR848024.4| Zebrafish DNA sequence from clone CH211-184C11 i... 38 6.8
72emb|BX004987.9| Human DNA sequence from clone RP11-435B5 on chro... 38 6.8
73emb|AL808026.10| Mouse DNA sequence from clone RP23-200N16 on ch... 38 6.8
74gb|AC000393.1|AC000393 Genomic sequence from Human 9q34, complet... 38 6.8
75emb|CR383665.9| Zebrafish DNA sequence from clone DKEY-3G23 in l... 38 6.8
76gb|AC000113.1|HSAC000113 Human PAC clone DJ302C05 from Xq23, com... 38 6.8
77dbj|AP001207.3| Homo sapiens genomic DNA, chromosome 8q23, clone... 38 6.8 
>ref|XM_469569.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1540

 Score = 61.9 bits (31), Expect = 5e-07
 Identities = 53/60 (88%), Gaps = 4/60 (6%)
 Strand = Plus / Minus

                                                                        
Query: 80   cctcaccaggcatctgattaaatttgattgaataaaccgaactcatgtgtccaaaatcac 139
            ||||| |||||||||||||||||||||    |||||||||||  ||||||||||||||||
Sbjct: 1460 cctcatcaggcatctgattaaatttga----ataaaccgaacatatgtgtccaaaatcac 1405
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 61.9 bits (31), Expect = 5e-07
 Identities = 53/60 (88%), Gaps = 4/60 (6%)
 Strand = Plus / Minus

                                                                            
Query: 80       cctcaccaggcatctgattaaatttgattgaataaaccgaactcatgtgtccaaaatcac 139
                ||||| |||||||||||||||||||||    |||||||||||  ||||||||||||||||
Sbjct: 28782256 cctcatcaggcatctgattaaatttga----ataaaccgaacatatgtgtccaaaatcac 28782201
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 61.9 bits (31), Expect = 5e-07
 Identities = 53/60 (88%), Gaps = 4/60 (6%)
 Strand = Plus / Minus

                                                                            
Query: 80       cctcaccaggcatctgattaaatttgattgaataaaccgaactcatgtgtccaaaatcac 139
                ||||| |||||||||||||||||||||    |||||||||||  ||||||||||||||||
Sbjct: 28873580 cctcatcaggcatctgattaaatttga----ataaaccgaacatatgtgtccaaaatcac 28873525
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>gb|AC091532.13| Oryza sativa chromosome 3 BAC OSJNBa0078A17 genomic sequence, complete
             sequence
          Length = 147344

 Score = 61.9 bits (31), Expect = 5e-07
 Identities = 53/60 (88%), Gaps = 4/60 (6%)
 Strand = Plus / Minus

                                                                         
Query: 80    cctcaccaggcatctgattaaatttgattgaataaaccgaactcatgtgtccaaaatcac 139
             ||||| |||||||||||||||||||||    |||||||||||  ||||||||||||||||
Sbjct: 89237 cctcatcaggcatctgattaaatttga----ataaaccgaacatatgtgtccaaaatcac 89182
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>dbj|AK100267.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065A19, full
            insert sequence
          Length = 1546

 Score = 61.9 bits (31), Expect = 5e-07
 Identities = 53/60 (88%), Gaps = 4/60 (6%)
 Strand = Plus / Minus

                                                                        
Query: 80   cctcaccaggcatctgattaaatttgattgaataaaccgaactcatgtgtccaaaatcac 139
            ||||| |||||||||||||||||||||    |||||||||||  ||||||||||||||||
Sbjct: 1474 cctcatcaggcatctgattaaatttga----ataaaccgaacatatgtgtccaaaatcac 1419
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>dbj|AK058421.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-D09, full
            insert sequence
          Length = 1508

 Score = 61.9 bits (31), Expect = 5e-07
 Identities = 53/60 (88%), Gaps = 4/60 (6%)
 Strand = Plus / Minus

                                                                        
Query: 80   cctcaccaggcatctgattaaatttgattgaataaaccgaactcatgtgtccaaaatcac 139
            ||||| |||||||||||||||||||||    |||||||||||  ||||||||||||||||
Sbjct: 1468 cctcatcaggcatctgattaaatttga----ataaaccgaacatatgtgtccaaaatcac 1413
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>dbj|AB047313.1| Oryza sativa (japonica cultivar-group) OsRAc1 mRNA for actin,
            complete cds
          Length = 1556

 Score = 61.9 bits (31), Expect = 5e-07
 Identities = 53/60 (88%), Gaps = 4/60 (6%)
 Strand = Plus / Minus

                                                                        
Query: 80   cctcaccaggcatctgattaaatttgattgaataaaccgaactcatgtgtccaaaatcac 139
            ||||| |||||||||||||||||||||    |||||||||||  ||||||||||||||||
Sbjct: 1460 cctcatcaggcatctgattaaatttga----ataaaccgaacatatgtgtccaaaatcac 1405
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>gb|AF369906.1| Sorghum bicolor clone BAC10J22 Sbb3766 sequence
          Length = 152439

 Score = 60.0 bits (30), Expect = 2e-06
 Identities = 58/67 (86%), Gaps = 4/67 (5%)
 Strand = Plus / Minus

                                                                         
Query: 73    ctagtagcctcaccaggcatctgattaaatttgattgaataaaccgaactcatgtgtcca 132
             |||||||||||| ||||||||| ||||||    |||||||| |||||||  |||||||||
Sbjct: 13280 ctagtagcctcatcaggcatctcattaaa----attgaatagaccgaacatatgtgtcca 13225

                    
Query: 133   aaatcac 139
             |||||||
Sbjct: 13224 aaatcac 13218
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>emb|AL357552.25| Human DNA sequence from clone RP4-633I8 on chromosome 1p36.21-36.32
              Contains the 5' end of the RERE gene for arginine-glutamic
              acid dipeptide (RE) repeats (FLJ38775), two ribosomal
              protein L7 (RPL7) pseudogenes, a ribosomal protein L27
              (RPL27) pseudogene, a novel gene and a CpG island, complete
              sequence
          Length = 143969

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1      atattattcattcatttaaca 21
              |||||||||||||||||||||
Sbjct: 120406 atattattcattcatttaaca 120426
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>emb|X79378.1|SVSOAC1 S.vulgare SoAc1 mRNA
          Length = 1445

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 106  attgaataaaccgaactcatgtgtccaaaatca 138
            |||||||| |||||||  |||||||||||||||
Sbjct: 1396 attgaatagaccgaacatatgtgtccaaaatca 1364
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>gb|AC016587.9| Homo sapiens chromosome 19 clone CTD-2632B17, complete sequence
          Length = 155221

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 44   atgaaatcaaaaacaccagcc 64
            |||||||||||||||||||||
Sbjct: 5816 atgaaatcaaaaacaccagcc 5796
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>dbj|AK022404.1| Homo sapiens cDNA FLJ12342 fis, clone MAMMA1002282
          Length = 2443

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1    atattattcattcatttaaca 21
            |||||||||||||||||||||
Sbjct: 1694 atattattcattcatttaaca 1674
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>gb|AC016134.7| Homo sapiens chromosome 15 clone RP11-380D11 map 15q14, complete
             sequence
          Length = 170695

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 3     attattcattcatttaacagg 23
             |||||||||||||||||||||
Sbjct: 53894 attattcattcatttaacagg 53914
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>gb|AC005792.1|AC005792 Homo sapiens chromosome 19, BAC CIT-B-978SK-259j21, complete sequence
          Length = 81357

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 44    atgaaatcaaaaacaccagcc 64
             |||||||||||||||||||||
Sbjct: 77760 atgaaatcaaaaacaccagcc 77740
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>gb|AC139574.4| Mus musculus BAC clone RP23-477I8 from chromosome 15, complete
            sequence
          Length = 190948

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 78   agcctcaccaggcatctgat 97
            ||||||||||||||||||||
Sbjct: 8396 agcctcaccaggcatctgat 8377
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>gb|AC166333.9| Mus musculus chromosome 1, clone RP23-395A13, complete sequence
          Length = 188044

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 13     catttaacagggtagtgatgacac 36
              ||||||||||||| ||||||||||
Sbjct: 164918 catttaacagggtggtgatgacac 164941
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>ref|XM_721449.1| Plasmodium yoelii yoelii str. 17XNL pKU-alpha protein kinase
            (PY05975) partial mRNA
          Length = 2300

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   atgacaaatgaaatcaaaaa 56
            ||||||||||||||||||||
Sbjct: 1578 atgacaaatgaaatcaaaaa 1597
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>ref|XM_737111.1| Plasmodium chabaudi chabaudi protein kinase (PC000272.02.0) partial
           mRNA
          Length = 1530

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 37  atgacaaatgaaatcaaaaa 56
           ||||||||||||||||||||
Sbjct: 808 atgacaaatgaaatcaaaaa 827
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>gb|AC113085.6| Mus musculus chromosome 8, clone RP23-292P21, complete sequence
          Length = 211723

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 6      attcattcatttaacagggt 25
              ||||||||||||||||||||
Sbjct: 112650 attcattcatttaacagggt 112631
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>ref|XM_675300.1| Plasmodium berghei strain ANKA hypothetical protein (PB000797.02.0)
            partial mRNA
          Length = 3897

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   atgacaaatgaaatcaaaaa 56
            ||||||||||||||||||||
Sbjct: 3175 atgacaaatgaaatcaaaaa 3194
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>gb|AC163007.4| Mus musculus chromosome 1, clone RP23-421G18, complete sequence
          Length = 195727

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 13     catttaacagggtagtgatgacac 36
              ||||||||||||| ||||||||||
Sbjct: 166768 catttaacagggtggtgatgacac 166745
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>emb|Z94056.1|HS436M11 Human DNA sequence from clone RP3-436M11 on chromosome Xp22.11-22.2,
              complete sequence
          Length = 134403

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 4      ttattcattcatttaacagg 23
              ||||||||||||||||||||
Sbjct: 132552 ttattcattcatttaacagg 132571
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>emb|AL512599.33| Human DNA sequence from clone RP11-115D7 on chromosome 1 Contains the
             CAP1 gene for CAP, adenylate cyclase-associated protein 1
             (yeast), the PPT1 gene for palmitoyl-protein thioesterase
             1 (ceroid-lipofuscinosis, neuronal 1, infantile), an
             ornithine decarboxylase antizyme 1 (OAZ1) pseudogene, the
             5' end of the RLF gene for rearranged L-myc fusion
             sequence and a CpG island, complete sequence
          Length = 157750

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     tattattcattcatttaaca 21
             ||||||||||||||||||||
Sbjct: 53576 tattattcattcatttaaca 53557
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>gb|AC093165.5| Homo sapiens BAC clone RP11-1255P17 from 2, complete sequence
          Length = 163772

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 4      ttattcattcatttaacagg 23
              ||||||||||||||||||||
Sbjct: 128476 ttattcattcatttaacagg 128457
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>gb|AC112957.14| Mus musculus chromosome 15, clone RP23-418C6, complete sequence
          Length = 186051

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    agcctcaccaggcatctgat 97
             ||||||||||||||||||||
Sbjct: 25006 agcctcaccaggcatctgat 25025
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>emb|AL079306.3|CNS00M8P Human chromosome 14 DNA sequence BAC R-216F9 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 184249

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 93     ctgattaaatttgattgaat 112
              ||||||||||||||||||||
Sbjct: 103979 ctgattaaatttgattgaat 103998
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>ref|XM_629212.1| Dictyostelium discoideum hypothetical protein (DDB0191855), partial
           mRNA
          Length = 3579

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 40  acaaatgaaatcaaaaaca 58
           |||||||||||||||||||
Sbjct: 507 acaaatgaaatcaaaaaca 525
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>ref|XM_419977.1| PREDICTED: Gallus gallus similar to HS1-binding protein 3 isoform 1
            (LOC421966), mRNA
          Length = 2448

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 81   ctcaccaggcatctgatta 99
            |||||||||||||||||||
Sbjct: 1376 ctcaccaggcatctgatta 1358
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>gb|AY294256.1| Lepeophtheirus salmonis trypsin 1c mRNA, partial cds
          Length = 875

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 38  tgacaaatgaaatcaaaaa 56
           |||||||||||||||||||
Sbjct: 812 tgacaaatgaaatcaaaaa 794
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>gb|AC147649.2| Homo sapiens BAC clone RP11-188B11 from UL, complete sequence
          Length = 150742

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 86     caggcatctgattaaattt 104
              |||||||||||||||||||
Sbjct: 142252 caggcatctgattaaattt 142234
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>gb|AC147234.3| Mus musculus BAC clone RP24-500F11 from chromosome 18, complete
             sequence
          Length = 189846

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 4     ttattcattcatttaacag 22
             |||||||||||||||||||
Sbjct: 82110 ttattcattcatttaacag 82128
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>gb|AC073326.6| Homo sapiens BAC clone RP11-358A10 from 7, complete sequence
          Length = 160629

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 1     atattattcattcatttaa 19
             |||||||||||||||||||
Sbjct: 16775 atattattcattcatttaa 16793
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>gb|AY363103.1|AY363102S2 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, exons 6
              through 10 and partial cds
          Length = 688489

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 5      tattcattcatttaacagg 23
              |||||||||||||||||||
Sbjct: 238524 tattcattcatttaacagg 238542
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>gb|AC132336.3| Mus musculus BAC clone RP24-230N9 from chromosome 12, complete sequence
          Length = 149020

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 45    tgaaatcaaaaacaccagc 63
             |||||||||||||||||||
Sbjct: 82249 tgaaatcaaaaacaccagc 82267
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>gb|AC122211.4| Mus musculus BAC clone RP23-97F18 from chromosome 18, complete sequence
          Length = 186451

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 4     ttattcattcatttaacag 22
             |||||||||||||||||||
Sbjct: 35347 ttattcattcatttaacag 35329
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>gb|AC122932.4| Mus musculus BAC clone RP23-16A20 from 1, complete sequence
          Length = 197193

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 67     atttctctagtagcctcac 85
              |||||||||||||||||||
Sbjct: 129050 atttctctagtagcctcac 129068
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>emb|CR456621.10| Zebrafish DNA sequence from clone DKEY-37G16 in linkage group 14,
              complete sequence
          Length = 177017

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 37     atgacaaatgaaatcaaaa 55
              |||||||||||||||||||
Sbjct: 167320 atgacaaatgaaatcaaaa 167338
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>gb|AC124776.3| Mus musculus BAC clone RP23-89D11 from 12, complete sequence
          Length = 179618

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 45    tgaaatcaaaaacaccagc 63
             |||||||||||||||||||
Sbjct: 10576 tgaaatcaaaaacaccagc 10594
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>gb|AC113126.10| Mus musculus chromosome 6, clone RP23-352D5, complete sequence
          Length = 176364

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 93     ctgattaaatttgattgaa 111
              |||||||||||||||||||
Sbjct: 149053 ctgattaaatttgattgaa 149071
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>gb|AC102431.7| Mus musculus chromosome 14, clone RP24-106J1, complete sequence
          Length = 157923

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 5     tattcattcatttaacagg 23
             |||||||||||||||||||
Sbjct: 72497 tattcattcatttaacagg 72479
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>emb|AL593851.6| Human DNA sequence from clone RP11-415H23 on chromosome 9 Contains the
             GFI1B gene for growth factor independent 1B (potential
             regulator of CDKN1A, translocated in CML), the gene for a
             novel protein similar to eukaryotic translation elongation
             factor 1 alpha1 (EEF1A1), a pseudogene similar to part of
             zinc finger proteins and a novel gene, complete sequence
          Length = 69926

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 4     ttattcattcatttaacag 22
             |||||||||||||||||||
Sbjct: 22489 ttattcattcatttaacag 22471
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>emb|AL355495.10| Human DNA sequence from clone RP11-53N12 on chromosome 10, complete
            sequence
          Length = 166118

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 3    attattcattcatttaaca 21
            |||||||||||||||||||
Sbjct: 8615 attattcattcatttaaca 8597
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>emb|AL121899.37|HSBA128M1 Human DNA sequence from clone RP11-128M1 on chromosome 20 Contains the
             3' end of a variant of the STK35 gene for serine/threonine
             kinase 35, a novel gene and a CpG island, complete
             sequence
          Length = 139037

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 85    ccaggcatctgattaaatt 103
             |||||||||||||||||||
Sbjct: 33494 ccaggcatctgattaaatt 33476
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>gb|AC145212.1| Homo sapiens BAC clone RP11-1368F8 from UL, complete sequence
          Length = 191469

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 86     caggcatctgattaaattt 104
              |||||||||||||||||||
Sbjct: 184016 caggcatctgattaaattt 183998
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>emb|AL031602.14|HS1174N9 Human DNA sequence from clone RP5-1174N9 on chromosome 1p34.1-35.3
            Contains the gene for a novel protein (FLJ90005) and two
            CpG islands, complete sequence
          Length = 72930

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 56   acaccagccgtatttctct 74
            |||||||||||||||||||
Sbjct: 2652 acaccagccgtatttctct 2670
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>emb|AL024497.5|HS283K11 Human DNA sequence from clone RP1-283K11 on chromosome 6q23.1-24.3
              Contains part of the EYA4 gene for eyes absent homolog 4
              (Drosophila) (Deafness, autosomal nonsyndromic
              sensorineural, 10 (DFNA10)), the 3' end of a novel gene and
              two novel genes, complete sequence
          Length = 140682

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 4      ttattcattcatttaacag 22
              |||||||||||||||||||
Sbjct: 113070 ttattcattcatttaacag 113088
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>emb|AL031587.3|HS1039K5 Human DNA sequence from clone RP5-1039K5 on chromosome 22q12.3-13.2,
              complete sequence
          Length = 142723

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 4      ttattcattcatttaacag 22
              |||||||||||||||||||
Sbjct: 108501 ttattcattcatttaacag 108519
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>gb|AC155730.9| Mus musculus 6 BAC RP24-182M11 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 171603

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 93     ctgattaaatttgattgaa 111
              |||||||||||||||||||
Sbjct: 132191 ctgattaaatttgattgaa 132173
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>gb|AC130650.2| Homo sapiens chromosome 16 clone CTA-276F8, complete sequence
          Length = 215286

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 3      attattcattcatttaaca 21
              |||||||||||||||||||
Sbjct: 141674 attattcattcatttaaca 141692
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>gb|AC105420.5| Homo sapiens BAC clone RP11-593F5 from 4, complete sequence
          Length = 118605

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 1      atattattcattcatttaa 19
              |||||||||||||||||||
Sbjct: 102786 atattattcattcatttaa 102768
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>gb|AC026223.11| Homo sapiens chromosome 10 clone RP11-548F5, complete sequence
          Length = 169131

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 3     attattcattcatttaaca 21
             |||||||||||||||||||
Sbjct: 63842 attattcattcatttaaca 63860
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>gb|AC083801.20| Homo sapiens 3 BAC RP11-646E18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 159621

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 4     ttattcattcatttaacag 22
             |||||||||||||||||||
Sbjct: 39165 ttattcattcatttaacag 39147
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>gb|AC091162.9| Homo sapiens chromosome 8, clone RP11-255E13, complete sequence
          Length = 149697

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 4     ttattcattcatttaacag 22
             |||||||||||||||||||
Sbjct: 57383 ttattcattcatttaacag 57401
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>gb|AC069020.8| Homo sapiens chromosome 10 clone RP11-165K20, complete sequence
          Length = 171413

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 3      attattcattcatttaaca 21
              |||||||||||||||||||
Sbjct: 144328 attattcattcatttaaca 144346
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>gb|AC023380.9| Homo sapiens chromosome 18, clone RP11-27C7, complete sequence
          Length = 121821

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 3     attattcattcatttaaca 21
             |||||||||||||||||||
Sbjct: 24572 attattcattcatttaaca 24554
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>gb|AC024600.5| Homo sapiens chromosome 10 clone RP11-179K3, complete sequence
          Length = 147878

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 3     attattcattcatttaaca 21
             |||||||||||||||||||
Sbjct: 17108 attattcattcatttaaca 17126
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>gb|AC100783.2| Homo sapiens chromosome 18, clone RP11-141I4, complete sequence
          Length = 149913

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 3     attattcattcatttaaca 21
             |||||||||||||||||||
Sbjct: 39742 attattcattcatttaaca 39760
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>gb|AC013746.10| Homo sapiens chromosome 8, clone RP11-131P18, complete sequence
          Length = 212337

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 3      attattcattcatttaaca 21
              |||||||||||||||||||
Sbjct: 132551 attattcattcatttaaca 132569
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>gb|AY014864.1| Clarias gariepinus fushi tarazu factor 1-A (FTZ-F1) gene, intron and
            partial sequence, alternatively spliced
          Length = 2897

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 4    ttattcattcatttaacag 22
            |||||||||||||||||||
Sbjct: 2514 ttattcattcatttaacag 2532
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>gb|AC022872.4|AC022872 Homo sapiens chromosome 15, clone RP11-390D11, complete sequence
          Length = 181923

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 3      attattcattcatttaaca 21
              |||||||||||||||||||
Sbjct: 179105 attattcattcatttaaca 179123
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>gb|AC108491.4| Homo sapiens BAC clone RP11-138I17 from 4, complete sequence
          Length = 133452

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 3     attattcattcatttaaca 21
             |||||||||||||||||||
Sbjct: 18515 attattcattcatttaaca 18533
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>gb|AC020604.9| Homo sapiens BAC clone RP11-536C12 from 2, complete sequence
          Length = 130506

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 3      attattcattcatttaaca 21
              |||||||||||||||||||
Sbjct: 121532 attattcattcatttaaca 121514
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>gb|AC008276.4| Homo sapiens BAC clone RP11-297I3 from 2, complete sequence
          Length = 208477

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 92    tctgattaaatttgattga 110
             |||||||||||||||||||
Sbjct: 42040 tctgattaaatttgattga 42058
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>gb|AC005495.2| Homo sapiens chromosome 17, clone RP11-293K20, complete sequence
          Length = 185252

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 4      ttattcattcatttaacag 22
              |||||||||||||||||||
Sbjct: 107556 ttattcattcatttaacag 107538
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>gb|AC118591.7| Mus musculus chromosome 3, clone RP24-93G19, complete sequence
          Length = 208878

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 97    ttaaatttgattgaataaa 115
             |||||||||||||||||||
Sbjct: 33809 ttaaatttgattgaataaa 33827
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>dbj|BS000016.1| Pan troglodytes chromosome 22 clone:PTB-066F21, map 22, complete
             sequences
          Length = 148564

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 4     ttattcattcatttaacag 22
             |||||||||||||||||||
Sbjct: 73663 ttattcattcatttaacag 73645
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>emb|X58001.1|CORPS12A Infectious bronchitis virus RNA for peplomeric S1 and S2 proteins
          Length = 1901

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 66  tatttctctagtagcctca 84
           |||||||||||||||||||
Sbjct: 657 tatttctctagtagcctca 675
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>gb|U91322.1|HSU91322 Human chromosome 16p13 BAC clone CIT987SK-276F8 complete sequence
          Length = 215286

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 3     attattcattcatttaaca 21
             |||||||||||||||||||
Sbjct: 73613 attattcattcatttaaca 73595
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>emb|AL163208.2|HS21C008 Homo sapiens chromosome 21 segment HS21C008
          Length = 340000

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 4      ttattcattcatttaacag 22
              |||||||||||||||||||
Sbjct: 281732 ttattcattcatttaacag 281714
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>gb|AF130248.1|AF130248 Homo sapiens clone 10J13 chromosome 21 map 21q11.2, complete sequence
          Length = 137074

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 4     ttattcattcatttaacag 22
             |||||||||||||||||||
Sbjct: 67929 ttattcattcatttaacag 67911
to top
>emb|CR848024.4| Zebrafish DNA sequence from clone CH211-184C11 in linkage group 7,
              complete sequence
          Length = 151237

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 96     attaaatttgattgaataa 114
              |||||||||||||||||||
Sbjct: 114759 attaaatttgattgaataa 114777
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>emb|BX004987.9| Human DNA sequence from clone RP11-435B5 on chromosome 1, complete
              sequence
          Length = 201709

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 86     caggcatctgattaaattt 104
              |||||||||||||||||||
Sbjct: 193458 caggcatctgattaaattt 193440
to top
>emb|AL808026.10| Mouse DNA sequence from clone RP23-200N16 on chromosome X, complete
            sequence
          Length = 214016

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 4    ttattcattcatttaacag 22
            |||||||||||||||||||
Sbjct: 3671 ttattcattcatttaacag 3689
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>gb|AC000393.1|AC000393 Genomic sequence from Human 9q34, complete sequence
          Length = 43731

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 4     ttattcattcatttaacag 22
             |||||||||||||||||||
Sbjct: 21413 ttattcattcatttaacag 21431
to top
>emb|CR383665.9| Zebrafish DNA sequence from clone DKEY-3G23 in linkage group 14,
             complete sequence
          Length = 120923

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 37    atgacaaatgaaatcaaaa 55
             |||||||||||||||||||
Sbjct: 33770 atgacaaatgaaatcaaaa 33788
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>gb|AC000113.1|HSAC000113 Human PAC clone DJ302C05 from Xq23, complete sequence
          Length = 135672

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 4     ttattcattcatttaacag 22
             |||||||||||||||||||
Sbjct: 13189 ttattcattcatttaacag 13207
to top
>dbj|AP001207.3| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1562D12
          Length = 153936

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 4     ttattcattcatttaacag 22
             |||||||||||||||||||
Sbjct: 45131 ttattcattcatttaacag 45113


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,902,188
Number of Sequences: 3902068
Number of extensions: 1902188
Number of successful extensions: 178797
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 178504
Number of HSP's gapped (non-prelim): 285
length of query: 142
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 121
effective length of database: 17,151,101,840
effective search space: 2075283322640
effective search space used: 2075283322640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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