ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet77e04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ234721.1|HVU234721 Hordeum vulgare genomic DNA fragment; c... 46 0.052
2emb|AL953854.21| Human DNA sequence from clone RP11-211P14 on ch... 42 0.81
3emb|CR769775.11| Human DNA sequence from clone RP11-449H15 on ch... 42 0.81
4emb|AL935212.11| Human DNA sequence from clone RP11-160N1 on chr... 42 0.81
5emb|AL590235.23| Human DNA sequence from clone RP11-529E10 on ch... 42 0.81
6emb|AL391987.15| Human DNA sequence from clone RP11-374M1 on chr... 42 0.81
7emb|AL355151.11| Human DNA sequence from clone RP11-288C24 on ch... 42 0.81
8emb|AL121796.17|HSDJ368B9 Human DNA sequence from clone RP3-368B... 42 0.81
9gb|AC026730.6| Homo sapiens chromosome 5 clone CTD-2295C16, comp... 42 0.81
10gb|AC140172.3| Homo sapiens chromosome 5 clone RP11-811J10, comp... 42 0.81
11gb|AC012502.3|AC012502 Homo sapiens BAC clone RP11-461H6 from Y,... 42 0.81
12gb|AC093274.4| Homo sapiens chromosome 5 clone RP11-374A4, compl... 42 0.81
13emb|X75017.1|STADPGP S.tuberosum promoter for ADP-glucose pyroph... 42 0.81
14emb|AL162831.6|CNS01RI2 Human chromosome 14 DNA sequence BAC R-1... 42 0.81
15emb|AL161757.4|CNS01RHK Human chromosome 14 DNA sequence BAC R-1... 42 0.81
16emb|AL627306.15| Human DNA sequence from clone RP11-81A9 on chro... 42 0.81
17gb|AC139574.4| Mus musculus BAC clone RP23-477I8 from chromosome... 40 3.2
18gb|AC005567.1| Homo sapiens chromosome 16, cosmid clone 431F1 (L... 40 3.2
19gb|U97405.1| Caenorhabditis elegans cosmid T09B4, complete sequence 40 3.2
20gb|AY598423.1| Homo sapiens Fanconi anemia, complementation grou... 40 3.2
21gb|AC139941.9| Mus musculus chromosome 13, clone RP23-78M22, com... 40 3.2
22emb|CR385039.8| Zebrafish DNA sequence from clone DKEYP-31D1 in ... 40 3.2
23ref|XM_790248.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 3.2
24emb|BX255938.7| Mouse DNA sequence from clone RP23-333B5 on chro... 40 3.2
25gb|AC146756.17| Medicago truncatula clone mth2-15l17, complete s... 40 3.2
26dbj|AK137883.1| Mus musculus 16 days neonate thymus cDNA, RIKEN ... 40 3.2
27gb|AC093884.4| Homo sapiens BAC clone RP11-660K21 from 2, comple... 40 3.2
28emb|Z83075.1|HSZ83075 H.sapiens Fanconi anaemia group A gene, ex... 40 3.2
29gb|AC126930.4| Mus musculus BAC clone RP24-547J4 from 8, complet... 40 3.2
30gb|AC153524.3| Mus musculus 10 BAC RP23-349H12 (Roswell Park Can... 40 3.2
31emb|AL928710.6| Mouse DNA sequence from clone RP23-255P20 on chr... 40 3.2 
>emb|AJ234721.1|HVU234721 Hordeum vulgare genomic DNA fragment; clone MWG2031.uni
          Length = 205

 Score = 46.1 bits (23), Expect = 0.052
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 47  ttataaaagtgaacaaagggagtagat 73
           ||||||||||||||| |||||||||||
Sbjct: 203 ttataaaagtgaacagagggagtagat 177
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>emb|AL953854.21| Human DNA sequence from clone RP11-211P14 on chromosome 9 Contains a
             pseudogene similar to part of a vomeronasal 2 family
             protein and a novel protein similar to contactin
             associated protein-like 3 (CNTNAP3), complete sequence
          Length = 157546

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 96    aaccacacacacaaactacac 116
             |||||||||||||||||||||
Sbjct: 28005 aaccacacacacaaactacac 28025



 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 96    aaccacacacacaaactacac 116
             |||||||||||||||||||||
Sbjct: 27919 aaccacacacacaaactacac 27939



 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 96    aaccacacacacaaactacac 116
             |||||||||||||||||||||
Sbjct: 27874 aaccacacacacaaactacac 27894



 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 96    aaccacacacacaaactacac 116
             |||||||||||||||||||||
Sbjct: 27728 aaccacacacacaaactacac 27748



 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 96    aaccacacacacaaactacac 116
             |||||||||||||||||||||
Sbjct: 26732 aaccacacacacaaactacac 26752
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>emb|CR769775.11| Human DNA sequence from clone RP11-449H15 on chromosome 9 Contains a
             novel gene, complete sequence
          Length = 169430

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 96    aaccacacacacaaactacac 116
             |||||||||||||||||||||
Sbjct: 49388 aaccacacacacaaactacac 49408



 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 96    aaccacacacacaaactacac 116
             |||||||||||||||||||||
Sbjct: 49343 aaccacacacacaaactacac 49363



 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 96    aaccacacacacaaactacac 116
             |||||||||||||||||||||
Sbjct: 49272 aaccacacacacaaactacac 49292



 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 96    aaccacacacacaaactacac 116
             |||||||||||||||||||||
Sbjct: 49186 aaccacacacacaaactacac 49206



 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 96    aaccacacacacaaactacac 116
             |||||||||||||||||||||
Sbjct: 49126 aaccacacacacaaactacac 49146



 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 96    aaccacacacacaaactacac 116
             |||||||||||||||||||||
Sbjct: 48027 aaccacacacacaaactacac 48047
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>emb|AL935212.11| Human DNA sequence from clone RP11-160N1 on chromosome 9 Contains eight
             novel pseudogenes, two novel genes and three CpG islands,
             complete sequence
          Length = 181647

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 96    aaccacacacacaaactacac 116
             |||||||||||||||||||||
Sbjct: 14349 aaccacacacacaaactacac 14329



 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 96    aaccacacacacaaactacac 116
             |||||||||||||||||||||
Sbjct: 14289 aaccacacacacaaactacac 14269
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>emb|AL590235.23| Human DNA sequence from clone RP11-529E10 on chromosome 4, complete
            sequence
          Length = 159246

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 96   aaccacacacacaaactacac 116
            |||||||||||||||||||||
Sbjct: 4193 aaccacacacacaaactacac 4173



 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 96   aaccacacacacaaactacac 116
            |||||||||||||||||||||
Sbjct: 4133 aaccacacacacaaactacac 4113



 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 96   aaccacacacacaaactacac 116
            |||||||||||||||||||||
Sbjct: 3093 aaccacacacacaaactacac 3073



 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 96   aaccacacacacaaactacac 116
            |||||||||||||||||||||
Sbjct: 3033 aaccacacacacaaactacac 3013



 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 96   aaccacacacacaaactacac 116
            |||||||||||||||||||||
Sbjct: 2861 aaccacacacacaaactacac 2841
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>emb|AL391987.15| Human DNA sequence from clone RP11-374M1 on chromosome 9 Contains the
             FAM27C gene for family with sequence similarity 27, member
             C, three novel genes, five novel pseudogenes and six CpG
             islands, complete sequence
          Length = 202081

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 96    aaccacacacacaaactacac 116
             |||||||||||||||||||||
Sbjct: 31575 aaccacacacacaaactacac 31555



 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 96    aaccacacacacaaactacac 116
             |||||||||||||||||||||
Sbjct: 30521 aaccacacacacaaactacac 30501



 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 96    aaccacacacacaaactacac 116
             |||||||||||||||||||||
Sbjct: 30461 aaccacacacacaaactacac 30441



 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 96    aaccacacacacaaactacac 116
             |||||||||||||||||||||
Sbjct: 30375 aaccacacacacaaactacac 30355



 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 96    aaccacacacacaaactacac 116
             |||||||||||||||||||||
Sbjct: 30304 aaccacacacacaaactacac 30284



 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 96    aaccacacacacaaactacac 116
             |||||||||||||||||||||
Sbjct: 30259 aaccacacacacaaactacac 30239
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>emb|AL355151.11| Human DNA sequence from clone RP11-288C24 on chromosome 9, complete
             sequence
          Length = 95128

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 96    aaccacacacacaaactacac 116
             |||||||||||||||||||||
Sbjct: 59290 aaccacacacacaaactacac 59270



 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 96    aaccacacacacaaactacac 116
             |||||||||||||||||||||
Sbjct: 59230 aaccacacacacaaactacac 59210



 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 96    aaccacacacacaaactacac 116
             |||||||||||||||||||||
Sbjct: 59144 aaccacacacacaaactacac 59124



 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 96    aaccacacacacaaactacac 116
             |||||||||||||||||||||
Sbjct: 59073 aaccacacacacaaactacac 59053



 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 96    aaccacacacacaaactacac 116
             |||||||||||||||||||||
Sbjct: 59028 aaccacacacacaaactacac 59008
to top
>emb|AL121796.17|HSDJ368B9 Human DNA sequence from clone RP3-368B9 on chromosome 4, complete
             sequence
          Length = 133066

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 96    aaccacacacacaaactacac 116
             |||||||||||||||||||||
Sbjct: 73418 aaccacacacacaaactacac 73398



 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 96    aaccacacacacaaactacac 116
             |||||||||||||||||||||
Sbjct: 72526 aaccacacacacaaactacac 72506



 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 96    aaccacacacacaaactacac 116
             |||||||||||||||||||||
Sbjct: 72466 aaccacacacacaaactacac 72446



 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 96    aaccacacacacaaactacac 116
             |||||||||||||||||||||
Sbjct: 72309 aaccacacacacaaactacac 72289
to top
>gb|AC026730.6| Homo sapiens chromosome 5 clone CTD-2295C16, complete sequence
          Length = 134054

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 41    aagactttataaaagtgaaca 61
             |||||||||||||||||||||
Sbjct: 84062 aagactttataaaagtgaaca 84042
to top
>gb|AC140172.3| Homo sapiens chromosome 5 clone RP11-811J10, complete sequence
          Length = 178207

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 41     aagactttataaaagtgaaca 61
              |||||||||||||||||||||
Sbjct: 121376 aagactttataaaagtgaaca 121356
to top
>gb|AC012502.3|AC012502 Homo sapiens BAC clone RP11-461H6 from Y, complete sequence
          Length = 113799

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 45    ctttataaaagtgaacaaagggagt 69
             |||||||||||||||| ||||||||
Sbjct: 44351 ctttataaaagtgaaccaagggagt 44327
to top
>gb|AC093274.4| Homo sapiens chromosome 5 clone RP11-374A4, complete sequence
          Length = 186608

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 41   aagactttataaaagtgaaca 61
            |||||||||||||||||||||
Sbjct: 2108 aagactttataaaagtgaaca 2088
to top
>emb|X75017.1|STADPGP S.tuberosum promoter for ADP-glucose pyrophosphorylase(EC2.7.7.27)
          Length = 1219

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 50  taaaagtgaacaaagggagta 70
           |||||||||||||||||||||
Sbjct: 902 taaaagtgaacaaagggagta 922
to top
>emb|AL162831.6|CNS01RI2 Human chromosome 14 DNA sequence BAC R-1077A2 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 208102

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 14     ttttgcaatatgtctgaaatg 34
              |||||||||||||||||||||
Sbjct: 121562 ttttgcaatatgtctgaaatg 121582
to top
>emb|AL161757.4|CNS01RHK Human chromosome 14 DNA sequence BAC R-1085N6 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 242832

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 14    ttttgcaatatgtctgaaatg 34
             |||||||||||||||||||||
Sbjct: 24357 ttttgcaatatgtctgaaatg 24377
to top
>emb|AL627306.15| Human DNA sequence from clone RP11-81A9 on chromosome 9, complete
            sequence
          Length = 51133

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 96   aaccacacacacaaactacac 116
            |||||||||||||||||||||
Sbjct: 2887 aaccacacacacaaactacac 2867



 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 96   aaccacacacacaaactacac 116
            |||||||||||||||||||||
Sbjct: 2827 aaccacacacacaaactacac 2807



 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 96   aaccacacacacaaactacac 116
            |||||||||||||||||||||
Sbjct: 2741 aaccacacacacaaactacac 2721



 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 96   aaccacacacacaaactacac 116
            |||||||||||||||||||||
Sbjct: 2670 aaccacacacacaaactacac 2650



 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 96   aaccacacacacaaactacac 116
            |||||||||||||||||||||
Sbjct: 2625 aaccacacacacaaactacac 2605
to top
>gb|AC139574.4| Mus musculus BAC clone RP23-477I8 from chromosome 15, complete sequence
          Length = 190948

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 26     tctgaaatgtctacaaagac 45
              ||||||||||||||||||||
Sbjct: 170962 tctgaaatgtctacaaagac 170981
to top
>gb|AC005567.1| Homo sapiens chromosome 16, cosmid clone 431F1 (LANL), complete
             sequence
          Length = 41073

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 190   ctgtgacagctcacaccgtg 209
             ||||||||||||||||||||
Sbjct: 16948 ctgtgacagctcacaccgtg 16929
to top
>gb|U97405.1| Caenorhabditis elegans cosmid T09B4, complete sequence
          Length = 38336

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 156   aggcaaaactactcggcacaaatc 179
             |||||||||| |||||||||||||
Sbjct: 10805 aggcaaaactgctcggcacaaatc 10782
to top
>gb|AY598423.1| Homo sapiens Fanconi anemia, complementation group A (FANCA) gene,
             partial cds
          Length = 79079

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 190   ctgtgacagctcacaccgtg 209
             ||||||||||||||||||||
Sbjct: 23867 ctgtgacagctcacaccgtg 23848
to top
>gb|AC139941.9| Mus musculus chromosome 13, clone RP23-78M22, complete sequence
          Length = 236536

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 185    cttcactgtgacagctcaca 204
              ||||||||||||||||||||
Sbjct: 170306 cttcactgtgacagctcaca 170325
to top
>emb|CR385039.8| Zebrafish DNA sequence from clone DKEYP-31D1 in linkage group 24,
             complete sequence
          Length = 166302

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     ggaaattgaactattttgca 20
             ||||||||||||||||||||
Sbjct: 27081 ggaaattgaactattttgca 27062
to top
>ref|XM_790248.1| PREDICTED: Strongylocentrotus purpuratus similar to annexin VII
            isoform 1 (LOC590651), mRNA
          Length = 1229

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 168  tcggcacaaatcagggactt 187
            ||||||||||||||||||||
Sbjct: 1170 tcggcacaaatcagggactt 1151
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>emb|BX255938.7| Mouse DNA sequence from clone RP23-333B5 on chromosome 11 Contains part
             of a novel gene, complete sequence
          Length = 207346

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 97    accacacacacaaactacac 116
             ||||||||||||||||||||
Sbjct: 26833 accacacacacaaactacac 26814
to top
>gb|AC146756.17| Medicago truncatula clone mth2-15l17, complete sequence
          Length = 120437

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 46   tttataaaagtgaacaaagg 65
            ||||||||||||||||||||
Sbjct: 5552 tttataaaagtgaacaaagg 5533
to top
>dbj|AK137883.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A130034H19 product:hypothetical protein,
            full insert sequence
          Length = 3823

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 178  tcagggacttcactgtgaca 197
            ||||||||||||||||||||
Sbjct: 1701 tcagggacttcactgtgaca 1720
to top
>gb|AC093884.4| Homo sapiens BAC clone RP11-660K21 from 2, complete sequence
          Length = 105087

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    cacacacacaaactacacca 118
             ||||||||||||||||||||
Sbjct: 35849 cacacacacaaactacacca 35868
to top
>emb|Z83075.1|HSZ83075 H.sapiens Fanconi anaemia group A gene, exons 12, 13 and 14
          Length = 1612

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 190 ctgtgacagctcacaccgtg 209
           ||||||||||||||||||||
Sbjct: 608 ctgtgacagctcacaccgtg 589
to top
>gb|AC126930.4| Mus musculus BAC clone RP24-547J4 from 8, complete sequence
          Length = 191241

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   aaccattataaggcaaaact 165
             ||||||||||||||||||||
Sbjct: 93164 aaccattataaggcaaaact 93183
to top
>gb|AC153524.3| Mus musculus 10 BAC RP23-349H12 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 167574

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 97     accacacacacaaactacac 116
              ||||||||||||||||||||
Sbjct: 120979 accacacacacaaactacac 120998
to top
>emb|AL928710.6| Mouse DNA sequence from clone RP23-255P20 on chromosome 2, complete
             sequence
          Length = 180748

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 178   tcagggacttcactgtgaca 197
             ||||||||||||||||||||
Sbjct: 23081 tcagggacttcactgtgaca 23062


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,727,906
Number of Sequences: 3902068
Number of extensions: 2727906
Number of successful extensions: 55146
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54868
Number of HSP's gapped (non-prelim): 278
length of query: 249
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 227
effective length of database: 17,147,199,772
effective search space: 3892414348244
effective search space used: 3892414348244
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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