ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet77d08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X76911.1|HVEMIP H.vulgare mRNA for transmembrane protein 551 e-154
2emb|AJ224327.1|OSAJ4327 Oryza sativa mRNA for aquaporin, complet... 48 0.015
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.015
4dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.015
5dbj|AP005108.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.015
6dbj|AK104658.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.015
7dbj|AK103807.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.015
8dbj|AK061769.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.015
9gb|AF022737.1|AF022737 Oryza sativa transmembrane protein mRNA, ... 48 0.015
10dbj|AB009665.1| Oryza sativa (japonica cultivar-group) mRNA for ... 48 0.015
11emb|AJ843992.1| Plantago major partial mRNA for aquaporin 2 (aqp... 46 0.061
12emb|AL772318.6| Mouse DNA sequence from clone RP23-77I17 on chro... 46 0.061
13gb|AF141643.1|AF141643 Vitis berlandieri x Vitis rupestris putat... 42 0.95
14gb|AC153823.5| Mus musculus 10 BAC RP23-11M21 (Roswell Park Canc... 42 0.95
15gb|AF188843.1|AF188843 Vitis vinifera cultivar Pinot Noir plasma... 42 0.95
16gb|AC153943.3| Mus musculus 10 BAC RP24-408O23 (Roswell Park Can... 42 0.95
17ref|NM_130159.2| Arabidopsis thaliana PIP1B; water channel AT2G4... 40 3.7
18gb|AF499725.1| Thellungiella halophila plasma membrane intrinsic... 40 3.7
19emb|CR339052.6| Zebrafish DNA sequence from clone CH211-218E6 in... 40 3.7
20gb|AC007528.5| Homo sapiens 12 BAC RP11-473N11 (Roswell Park Can... 40 3.7
21emb|AL117377.18|HSJ1037B9 Human DNA sequence from clone RP5-1037... 40 3.7
22emb|Z17424.1|ATORFA Arabidopsis thaliana mRNA for PIP1b protein 40 3.7
23emb|X95640.1|BOMIPBTCP B.oleracea mRNA for transmembrane channel... 40 3.7
24emb|X95639.1|BOMIPATCP B.oleracea mRNA for transmembrane channel... 40 3.7
25gb|AY091254.1| Arabidopsis thaliana putative aquaporin protein (... 40 3.7
26emb|X68293.1|ATRNATPR A.thaliana mRNA for transmembrane protein A 40 3.7
27gb|AY063931.1| Arabidopsis thaliana putative aquaporin, plasma m... 40 3.7
28gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome 40 3.7
29gb|AC182472.3| Pan troglodytes BAC clone CH251-394C9 from chromo... 40 3.7
30gb|AC004665.3| Arabidopsis thaliana chromosome 2 clone F4I18 map... 40 3.7
31gb|AC016493.14| Homo sapiens chromosome 18, clone RP11-58G13, co... 40 3.7
32gb|AC079064.6| Homo sapiens chromosome 11, clone RP11-485O14, co... 40 3.7
33gb|AC023577.6| Homo sapiens chromosome 18, clone RP11-645D5, com... 40 3.7
34dbj|AK222086.1| Arabidopsis thaliana mRNA for aquaporin, partial... 40 3.7
35gb|AY049238.1| Arabidopsis thaliana clone RAFL08-10-H13(R13205),... 40 3.7
36gb|AF299051.1|AF299051 Brassica oleracea aquaporin PIP1b2 mRNA, ... 40 3.7
37gb|AF299050.1|AF299050 Brassica oleracea aquaporin PIP1b1 mRNA, ... 40 3.7
38emb|BX820173.1|CNS0A8G3 Arabidopsis thaliana Full-length cDNA Co... 40 3.7
39emb|BX819664.1|CNS0A8JV Arabidopsis thaliana Full-length cDNA Co... 40 3.7
40emb|BX820969.1|CNS0A7WJ Arabidopsis thaliana Full-length cDNA Co... 40 3.7
41emb|BX819791.1|CNS0A7WA Arabidopsis thaliana Full-length cDNA Co... 40 3.7
42gb|AC011500.7| Homo sapiens chromosome 19 clone CTB-60E11, compl... 40 3.7
43gb|AY048294.1| Arabidopsis thaliana At2g45960/F4I18.6 mRNA, comp... 40 3.7
44emb|Z17399.1|ATORFB Arabidopsis thaliana PIP1b gene 40 3.7
45gb|AF004293.1|AF004293 Brassica rapa aquaporin (MOD) mRNA, compl... 40 3.7
46dbj|AB030695.1| Raphanus sativus PAQ1b mRNA for plasma membrane ... 40 3.7
47dbj|AB002149.1| Nicotiana excelsior mRNA for water channel prote... 40 3.7 
>emb|X76911.1|HVEMIP H.vulgare mRNA for transmembrane protein
          Length = 1225

 Score =  551 bits (278), Expect = e-154
 Identities = 284/286 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    gcacaacaacgagcagtactacacaacaactgagcactgatgagattacatacaagtcct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1181 gcacaacaacgagcagtactacacaacaactgagcactgatgagattacatacaagtcct 1122

                                                                        
Query: 61   ctgtctgggttcaggtgaatacagagcaagagcaagagtagcacatcaaacttggaagac 120
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1121 ctgtctgggttcaggtgaatacagagcaagagcaagagtagtacatcaaacttggaagac 1062

                                                                        
Query: 121  aaattggaattccacggtaacacggacgatgggaagagagggccgcccccatcagaaaga 180
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1061 aaattggaattccacggtaacagggacgatgggaagagagggccgcccccatcagaaaga 1002

                                                                        
Query: 181  aattcactcagaacacgcagtttgctcttcgggttgggatggcatctttctttgtagcag 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1001 aattcactcagaacacgcagtttgctcttcgggttgggatggcatctttctttgtagcag 942

                                                          
Query: 241  cagcttaggacttggtcttgaatgggatcgctctgatgaccacctg 286
            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941  cagcttaggacttggtcttgaatgggatcgctctgatgaccacctg 896
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>emb|AJ224327.1|OSAJ4327 Oryza sativa mRNA for aquaporin, complete CDS
          Length = 1139

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 243 gcttaggacttggtcttgaatgggatcgctctgatgaccacctg 286
           ||||| ||| || |||||||||||||||| ||||||| ||||||
Sbjct: 896 gcttaagacctgctcttgaatgggatcgccctgatgatcacctg 853
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                            
Query: 243      gcttaggacttggtcttgaatgggatcgctctgatgaccacctg 286
                ||||| ||| || |||||||||||||||| ||||||| ||||||
Sbjct: 27065653 gcttaagacctgctcttgaatgggatcgccctgatgatcacctg 27065610
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>dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1486_E07
          Length = 110494

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                         
Query: 243   gcttaggacttggtcttgaatgggatcgctctgatgaccacctg 286
             ||||| ||| || |||||||||||||||| ||||||| ||||||
Sbjct: 37302 gcttaagacctgctcttgaatgggatcgccctgatgatcacctg 37259
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>dbj|AP005108.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0461B08
          Length = 153743

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                          
Query: 243    gcttaggacttggtcttgaatgggatcgctctgatgaccacctg 286
              ||||| ||| || |||||||||||||||| ||||||| ||||||
Sbjct: 118855 gcttaagacctgctcttgaatgggatcgccctgatgatcacctg 118812
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>dbj|AK104658.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-D06, full
           insert sequence
          Length = 1128

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 243 gcttaggacttggtcttgaatgggatcgctctgatgaccacctg 286
           ||||| ||| || |||||||||||||||| ||||||| ||||||
Sbjct: 929 gcttaagacctgctcttgaatgggatcgccctgatgatcacctg 886
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>dbj|AK103807.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033147A07, full
           insert sequence
          Length = 1205

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 243 gcttaggacttggtcttgaatgggatcgctctgatgaccacctg 286
           ||||| ||| || |||||||||||||||| ||||||| ||||||
Sbjct: 984 gcttaagacctgctcttgaatgggatcgccctgatgatcacctg 941
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>dbj|AK061769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-C05, full
           insert sequence
          Length = 1136

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 243 gcttaggacttggtcttgaatgggatcgctctgatgaccacctg 286
           ||||| ||| || |||||||||||||||| ||||||| ||||||
Sbjct: 929 gcttaagacctgctcttgaatgggatcgccctgatgatcacctg 886
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>gb|AF022737.1|AF022737 Oryza sativa transmembrane protein mRNA, complete cds
          Length = 1140

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 243 gcttaggacttggtcttgaatgggatcgctctgatgaccacctg 286
           ||||| ||| || |||||||||||||||| ||||||| ||||||
Sbjct: 924 gcttaagacctgctcttgaatgggatcgccctgatgatcacctg 881
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>dbj|AB009665.1| Oryza sativa (japonica cultivar-group) mRNA for water channel
           protein, complete cds
          Length = 1116

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 243 gcttaggacttggtcttgaatgggatcgctctgatgaccacctg 286
           ||||| ||| || |||||||||||||||| ||||||| ||||||
Sbjct: 927 gcttaagacctgctcttgaatgggatcgccctgatgatcacctg 884
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>emb|AJ843992.1| Plantago major partial mRNA for aquaporin 2 (aqp2 gene)
          Length = 1089

 Score = 46.1 bits (23), Expect = 0.061
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 250 acttggtcttgaatgggatcgctctgatgaccacc 284
           ||||| ||||||||||||| |||||||| ||||||
Sbjct: 847 acttgttcttgaatgggatagctctgatcaccacc 813
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>emb|AL772318.6| Mouse DNA sequence from clone RP23-77I17 on chromosome 4, complete
              sequence
          Length = 249534

 Score = 46.1 bits (23), Expect = 0.061
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 60     tctgtctgggttcaggtgaatacagag 86
              ||||||||||| |||||||||||||||
Sbjct: 225070 tctgtctgggtacaggtgaatacagag 225044
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>gb|AF141643.1|AF141643 Vitis berlandieri x Vitis rupestris putative aquaporin PIP1-1
           (PIP1-1) mRNA, complete cds
          Length = 1115

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 250 acttggtcttgaatgggatcgctctgatgaccacctg 286
           |||||| |||||| || || |||||||||||||||||
Sbjct: 887 acttggacttgaagggaatggctctgatgaccacctg 851
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>gb|AC153823.5| Mus musculus 10 BAC RP23-11M21 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 210101

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 103   acatcaaacttggaagacaaa 123
             |||||||||||||||||||||
Sbjct: 24157 acatcaaacttggaagacaaa 24177
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>gb|AF188843.1|AF188843 Vitis vinifera cultivar Pinot Noir plasma membrane aquaporin
           (PIP1a) mRNA, complete cds
          Length = 1129

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 253 tggtcttgaatgggatcgctctgat 277
           |||||||||||||||| ||||||||
Sbjct: 907 tggtcttgaatgggatggctctgat 883
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>gb|AC153943.3| Mus musculus 10 BAC RP24-408O23 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 171960

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 103    acatcaaacttggaagacaaa 123
              |||||||||||||||||||||
Sbjct: 121183 acatcaaacttggaagacaaa 121203
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>ref|NM_130159.2| Arabidopsis thaliana PIP1B; water channel AT2G45960 (PIP1B) mRNA,
           complete cds
          Length = 1259

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 257 cttgaatgggatcgctctgatgac 280
           |||||||||||| |||||||||||
Sbjct: 988 cttgaatgggatggctctgatgac 965
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>gb|AF499725.1| Thellungiella halophila plasma membrane intrinsic protein 1B-like
           protein mRNA, complete cds
          Length = 833

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 257 cttgaatgggatcgctctgatgac 280
           |||||||||||| |||||||||||
Sbjct: 671 cttgaatgggattgctctgatgac 648
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>emb|CR339052.6| Zebrafish DNA sequence from clone CH211-218E6 in linkage group 10,
             complete sequence
          Length = 127879

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 173   cagaaagaaattcactcaga 192
             ||||||||||||||||||||
Sbjct: 53978 cagaaagaaattcactcaga 53997
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>gb|AC007528.5| Homo sapiens 12 BAC RP11-473N11 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 188451

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 82     cagagcaagagcaagagtag 101
              ||||||||||||||||||||
Sbjct: 155822 cagagcaagagcaagagtag 155841
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>emb|AL117377.18|HSJ1037B9 Human DNA sequence from clone RP5-1037B9 on chromosome 20p12.1-13
             Contains STSs, GSSs and a putative CpG island, complete
             sequence
          Length = 82183

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   cacatcaaacttggaagaca 121
             ||||||||||||||||||||
Sbjct: 72891 cacatcaaacttggaagaca 72872
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>emb|Z17424.1|ATORFA Arabidopsis thaliana mRNA for PIP1b protein
          Length = 1064

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 257 cttgaatgggatcgctctgatgac 280
           |||||||||||| |||||||||||
Sbjct: 908 cttgaatgggatggctctgatgac 885
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>emb|X95640.1|BOMIPBTCP B.oleracea mRNA for transmembrane channel protein (mipB)
          Length = 1114

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 257 cttgaatgggatcgctctgatgac 280
           |||||||||||| |||||||||||
Sbjct: 867 cttgaatgggatggctctgatgac 844
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>emb|X95639.1|BOMIPATCP B.oleracea mRNA for transmembrane channel protein (mipA)
          Length = 1104

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 257 cttgaatgggatcgctctgatgac 280
           |||||||||||| |||||||||||
Sbjct: 886 cttgaatgggatggctctgatgac 863
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>gb|AY091254.1| Arabidopsis thaliana putative aquaporin protein (At2g45960) mRNA,
           complete cds
          Length = 892

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 257 cttgaatgggatcgctctgatgac 280
           |||||||||||| |||||||||||
Sbjct: 849 cttgaatgggatggctctgatgac 826
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>emb|X68293.1|ATRNATPR A.thaliana mRNA for transmembrane protein A
          Length = 1105

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 257 cttgaatgggatcgctctgatgac 280
           |||||||||||| |||||||||||
Sbjct: 903 cttgaatgggatggctctgatgac 880
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>gb|AY063931.1| Arabidopsis thaliana putative aquaporin, plasma membrane intrinsic
           protein 1B (At2g45960) mRNA, complete cds
          Length = 1077

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 257 cttgaatgggatcgctctgatgac 280
           |||||||||||| |||||||||||
Sbjct: 909 cttgaatgggatggctctgatgac 886
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>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome
          Length = 5373180

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 166     cccccatcagaaagaaattcactc 189
               ||||||||||||| ||||||||||
Sbjct: 1961051 cccccatcagaaacaaattcactc 1961028
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>gb|AC182472.3| Pan troglodytes BAC clone CH251-394C9 from chromosome 19, complete
              sequence
          Length = 165954

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 223    catctttctttgtagcagcagctt 246
              |||||||| |||||||||||||||
Sbjct: 108793 catctttcattgtagcagcagctt 108770
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>gb|AC004665.3| Arabidopsis thaliana chromosome 2 clone F4I18 map CIC02E07, complete
             sequence
          Length = 101647

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 257   cttgaatgggatcgctctgatgac 280
             |||||||||||| |||||||||||
Sbjct: 15226 cttgaatgggatggctctgatgac 15249
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>gb|AC016493.14| Homo sapiens chromosome 18, clone RP11-58G13, complete sequence
          Length = 163936

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 112    ttggaagacaaattggaatt 131
              ||||||||||||||||||||
Sbjct: 159892 ttggaagacaaattggaatt 159873
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>gb|AC079064.6| Homo sapiens chromosome 11, clone RP11-485O14, complete sequence
          Length = 164009

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 170   catcagaaagaaattcactcagaa 193
             ||||||||| ||||||||||||||
Sbjct: 52709 catcagaaaaaaattcactcagaa 52732
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>gb|AC023577.6| Homo sapiens chromosome 18, clone RP11-645D5, complete sequence
          Length = 166503

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 112   ttggaagacaaattggaatt 131
             ||||||||||||||||||||
Sbjct: 50150 ttggaagacaaattggaatt 50131
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>dbj|AK222086.1| Arabidopsis thaliana mRNA for aquaporin, partial cds, clone:
           RAFL22-84-C08
          Length = 318

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 257 cttgaatgggatcgctctgatgac 280
           |||||||||||| |||||||||||
Sbjct: 111 cttgaatgggatggctctgatgac 88
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>gb|AY049238.1| Arabidopsis thaliana clone RAFL08-10-H13(R13205), mRNA sequence
          Length = 1913

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 257 cttgaatgggatcgctctgatgac 280
           |||||||||||| |||||||||||
Sbjct: 909 cttgaatgggatggctctgatgac 886
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>gb|AF299051.1|AF299051 Brassica oleracea aquaporin PIP1b2 mRNA, complete cds
          Length = 1101

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 257 cttgaatgggatcgctctgatgac 280
           |||||||||||| |||||||||||
Sbjct: 868 cttgaatgggatggctctgatgac 845
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>gb|AF299050.1|AF299050 Brassica oleracea aquaporin PIP1b1 mRNA, complete cds
          Length = 1084

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 257 cttgaatgggatcgctctgatgac 280
           |||||||||||| |||||||||||
Sbjct: 885 cttgaatgggatggctctgatgac 862
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>emb|BX820173.1|CNS0A8G3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS86ZH06 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1084

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 257 cttgaatgggatcgctctgatgac 280
           |||||||||||| |||||||||||
Sbjct: 889 cttgaatgggatggctctgatgac 866
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>emb|BX819664.1|CNS0A8JV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS13ZG09 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 679

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 257 cttgaatgggatcgctctgatgac 280
           |||||||||||| |||||||||||
Sbjct: 522 cttgaatgggatggctctgatgac 499
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>emb|BX820969.1|CNS0A7WJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH87ZA07 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1036

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 257 cttgaatgggatcgctctgatgac 280
           |||||||||||| |||||||||||
Sbjct: 894 cttgaatgggatggctctgatgac 871
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>emb|BX819791.1|CNS0A7WA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS2ZA01 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1060

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 257 cttgaatgggatcgctctgatgac 280
           |||||||||||| |||||||||||
Sbjct: 881 cttgaatgggatggctctgatgac 858
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>gb|AC011500.7| Homo sapiens chromosome 19 clone CTB-60E11, complete sequence
          Length = 200430

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 223    catctttctttgtagcagcagctt 246
              |||||||| |||||||||||||||
Sbjct: 139931 catctttcattgtagcagcagctt 139908
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>gb|AY048294.1| Arabidopsis thaliana At2g45960/F4I18.6 mRNA, complete cds
          Length = 1052

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 257 cttgaatgggatcgctctgatgac 280
           |||||||||||| |||||||||||
Sbjct: 909 cttgaatgggatggctctgatgac 886
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>emb|Z17399.1|ATORFB Arabidopsis thaliana PIP1b gene
          Length = 2773

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 257  cttgaatgggatcgctctgatgac 280
            |||||||||||| |||||||||||
Sbjct: 1547 cttgaatgggatggctctgatgac 1524
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>gb|AF004293.1|AF004293 Brassica rapa aquaporin (MOD) mRNA, complete cds
          Length = 900

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 257 cttgaatgggatcgctctgatgac 280
           |||||||||||| |||||||||||
Sbjct: 867 cttgaatgggatggctctgatgac 844
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>dbj|AB030695.1| Raphanus sativus PAQ1b mRNA for plasma membrane aquaporin 1b,
           complete cds
          Length = 1053

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 257 cttgaatgggatcgctctgatgac 280
           |||||||||||| |||||||||||
Sbjct: 870 cttgaatgggatggctctgatgac 847
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>dbj|AB002149.1| Nicotiana excelsior mRNA for water channel protein, complete cds
          Length = 1064

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 252 ttggtcttgaatgggatcgctctgatga 279
           |||||||||||||| || ||||||||||
Sbjct: 890 ttggtcttgaatggaatggctctgatga 863


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,038,894
Number of Sequences: 3902068
Number of extensions: 3038894
Number of successful extensions: 55073
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55000
Number of HSP's gapped (non-prelim): 73
length of query: 286
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 264
effective length of database: 17,147,199,772
effective search space: 4526860739808
effective search space used: 4526860739808
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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