| Clone Name | rbaet77c09 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 ataattaaacatgcatgtaca 43 ||||||||||||||||||||| Sbjct: 27694351 ataattaaacatgcatgtaca 27694371 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 tagtaacaaattaaattaaa 179 |||||||||||||||||||| Sbjct: 24060636 tagtaacaaattaaattaaa 24060655
>dbj|AP004989.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1153E06 Length = 174588 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 ataattaaacatgcatgtaca 43 ||||||||||||||||||||| Sbjct: 43606 ataattaaacatgcatgtaca 43626
>gb|AF027390.1|AF027390 Homo sapiens 7q telomere, complete sequence Length = 225432 Score = 42.1 bits (21), Expect = 0.66 Identities = 30/33 (90%) Strand = Plus / Plus Query: 8 caacaaagctgtgatataattaaacatgcatgt 40 ||||||||||||| |||||||||| ||||||| Sbjct: 140022 caacaaagctgtggaataattaaacctgcatgt 140054
>gb|AC122038.3| Mus musculus BAC clone RP24-427G24 from chromosome 3, complete sequence Length = 188751 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 attaaacatgcatgtacacc 45 |||||||||||||||||||| Sbjct: 182473 attaaacatgcatgtacacc 182492
>gb|AC115919.14| Mus musculus chromosome 3, clone RP24-493L18, complete sequence Length = 195790 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 attaaacatgcatgtacacc 45 |||||||||||||||||||| Sbjct: 38994 attaaacatgcatgtacacc 39013
>emb|BX897692.16| Zebrafish DNA sequence from clone DKEY-34F9 in linkage group 9, complete sequence Length = 185941 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 caaattaaattaaaacccat 185 |||||||||||||||||||| Sbjct: 156721 caaattaaattaaaacccat 156702
>dbj|AP003626.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0429G06 Length = 158321 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 tagtaacaaattaaattaaa 179 |||||||||||||||||||| Sbjct: 70329 tagtaacaaattaaattaaa 70348
>dbj|AP001759.1| Homo sapiens genomic DNA, chromosome 21q, section 103/105 Length = 340000 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 agtaacaaattaaattaaaa 180 |||||||||||||||||||| Sbjct: 166353 agtaacaaattaaattaaaa 166372
>gb|AC101812.19| Mus musculus chromosome 19, clone RP24-309C5, complete sequence Length = 169224 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 aaattaaattaaaacccatt 186 |||||||||||||||||||| Sbjct: 19829 aaattaaattaaaacccatt 19810
>dbj|AP001475.1| Homo sapiens genomic DNA, chromosome 21q22.3, clone:f133G20, telomere region, complete sequence Length = 13697 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 agtaacaaattaaattaaaa 180 |||||||||||||||||||| Sbjct: 7684 agtaacaaattaaattaaaa 7703 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,981,358 Number of Sequences: 3902068 Number of extensions: 1981358 Number of successful extensions: 194551 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 194376 Number of HSP's gapped (non-prelim): 175 length of query: 206 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 184 effective length of database: 17,147,199,772 effective search space: 3155084758048 effective search space used: 3155084758048 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)