| Clone Name | rbaet77a04 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL845436.7| Mouse DNA sequence from clone RP23-299N13 on chromosome 2, complete sequence Length = 126095 Score = 44.1 bits (22), Expect = 0.21 Identities = 25/26 (96%) Strand = Plus / Minus Query: 178 tttctcagtgtatttatcacaaggga 203 |||||||| ||||||||||||||||| Sbjct: 40560 tttctcagagtatttatcacaaggga 40535
>emb|CR788310.10| Zebrafish DNA sequence from clone DKEY-74F15 in linkage group 2, complete sequence Length = 244700 Score = 42.1 bits (21), Expect = 0.83 Identities = 24/25 (96%) Strand = Plus / Minus Query: 175 gtgtttctcagtgtatttatcacaa 199 |||||||||||||||||||| |||| Sbjct: 6464 gtgtttctcagtgtatttattacaa 6440
>gb|AF125222.1| Antheraea yamamai mariner transposon Ay1.1 transposase pseudogene, partial sequence Length = 450 Score = 42.1 bits (21), Expect = 0.83 Identities = 21/21 (100%) Strand = Plus / Minus Query: 91 agggcattgtttaagtgctga 111 ||||||||||||||||||||| Sbjct: 175 agggcattgtttaagtgctga 155
>gb|AF125219.1| Antheraea mylitta mariner transposon Anm1.1 transposase pseudogene, partial sequence Length = 450 Score = 42.1 bits (21), Expect = 0.83 Identities = 21/21 (100%) Strand = Plus / Minus Query: 91 agggcattgtttaagtgctga 111 ||||||||||||||||||||| Sbjct: 175 agggcattgtttaagtgctga 155
>gb|BC100571.1| Mus musculus cDNA clone IMAGE:6435376 Length = 3338 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 tcaagcctgtgaaattggta 230 |||||||||||||||||||| Sbjct: 936 tcaagcctgtgaaattggta 917
>dbj|AK085028.1| Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched library, clone:D430026I16 product:hypothetical protein, full insert sequence Length = 3010 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 tcaagcctgtgaaattggta 230 |||||||||||||||||||| Sbjct: 2392 tcaagcctgtgaaattggta 2411
>gb|AC097525.3| Homo sapiens BAC clone RP11-627E8 from 2, complete sequence Length = 55514 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 caaaaggacatctataagtg 42 |||||||||||||||||||| Sbjct: 297 caaaaggacatctataagtg 316
>gb|AC006994.4| Homo sapiens BAC clone RP11-396J8 from 2, complete sequence Length = 192104 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 caaaaggacatctataagtg 42 |||||||||||||||||||| Sbjct: 190400 caaaaggacatctataagtg 190419
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 tcgtgtttctcagtgtattt 192 |||||||||||||||||||| Sbjct: 2362193 tcgtgtttctcagtgtattt 2362212
>emb|AL671426.6| Mouse DNA sequence from clone RP23-107F15 on chromosome X, complete sequence Length = 123745 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 tcaagcctgtgaaattggta 230 |||||||||||||||||||| Sbjct: 40881 tcaagcctgtgaaattggta 40862 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,877,356 Number of Sequences: 3902068 Number of extensions: 1877356 Number of successful extensions: 31343 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 31325 Number of HSP's gapped (non-prelim): 18 length of query: 254 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 232 effective length of database: 17,147,199,772 effective search space: 3978150347104 effective search space used: 3978150347104 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)