>OPA_DROME (P39768) Pair-rule protein odd-paired|
          Length = 609

 Score = 30.8 bits (68), Expect = 0.88
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = +1

Query: 88  GQKTGIGIVYESSGISLAPVRAPTYPTPLKSFHKVGLESSSTGSSFPADSA 240
           G  +G+  +   SGI  +P    + P P+   H V L +SS+GSS  A S+
Sbjct: 417 GSSSGVSSLSGGSGIKSSPHSIKSEPNPM---HSVHLGASSSGSSSTASSS 464

>COG1_MOUSE (Q9Z160) Conserved oligomeric Golgi complex component 1 (Low|
           density lipoprotein receptor defect B-complementing
           protein)
          Length = 980

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 285 SLSTIQRNHSQGNGLGGISGERRPC 211
           +L T+ R H  G G+G + GE + C
Sbjct: 293 TLETVTRQHPTGKGIGALQGEMKLC 317

>GUAD_RAT (Q9WTT6) Guanine deaminase (EC 3.5.4.3) (Guanase) (Guanine aminase)|
           (Guanine aminohydrolase) (GAH)
          Length = 454

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 4   KN*VVVSHYCGSLFTNCSVTICNRTDKLGQKTGIGIV 114
           KN    + Y G++ T+ S+ +   TDK GQ+  +G V
Sbjct: 133 KNGTTTACYFGTIHTDSSLILAEITDKFGQRAFVGKV 169

>GUAD_MOUSE (Q9R111) Guanine deaminase (EC 3.5.4.3) (Guanase) (Guanine aminase)|
           (Guanine aminohydrolase) (GAH)
          Length = 454

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 4   KN*VVVSHYCGSLFTNCSVTICNRTDKLGQKTGIGIV 114
           KN    + Y G++ T+ S+ +   TDK GQ+  +G V
Sbjct: 133 KNGTTTACYFGTIHTDSSLILAEITDKFGQRAFVGKV 169

>SYD_THEAC (Q9HJM1) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA|
           ligase) (AspRS)
          Length = 428

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = +1

Query: 175 KSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGQWESR 300
           KS  K G+E S T  S   ++  P+PL VV  D  Q   E+R
Sbjct: 77  KSISKAGIEISGTSISIVNEAEAPLPLPVV--DPVQADLETR 116

>LHX3_PIG (O97581) LIM/homeobox protein Lhx3 (Homeobox protein LIM-3)|
           (Homeobox protein P-LIM) (LIM homeobox protein 3)
           (Fragment)
          Length = 383

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
 Frame = +1

Query: 109 IVYESSGISLAPVRAPTYPTPLKSFHKVGLESS-STGSS-----FPADSA 240
           +VY  +G+ L P   P  P P++     G  S  STGSS     FPA  A
Sbjct: 323 LVYPEAGLGLVPAGPPGGPPPMRVLAGNGPSSDLSTGSSGGYPDFPASPA 372

>RK21_CYAPA (P48128) Cyanelle 50S ribosomal protein L21|
          Length = 104

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +3

Query: 15  SGISLLWFTFYKLLGYNMQPDRQTRTKNGYR 107
           + I L  F   K++ Y MQP ++TR K G+R
Sbjct: 63  NAIILRHFLAPKVIVYKMQPKKKTRRKRGHR 93

>UBP19_HUMAN (O94966) Ubiquitin carboxyl-terminal hydrolase 19 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 19)
           (Ubiquitin-specific-processing protease 19)
           (Deubiquitinating enzyme 19) (Zinc finger MYND
           domain-containing protein 9) (Fragment)
          Length = 1371

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 21/62 (33%), Positives = 28/62 (45%)
 Frame = +1

Query: 31  CGSLFTNCSVTICNRTDKLGQKTGIGIVYESSGISLAPVRAPTYPTPLKSFHKVGLESSS 210
           C   FT   + IC R  +  Q+ G G+   ++ +  A V  PT PTPL S    G     
Sbjct: 412 CTFCFTASRIDICLRK-RQSQRWG-GLEAPAARVGGAKVAVPTGPTPLDSTPPGGAPHPL 469

Query: 211 TG 216
           TG
Sbjct: 470 TG 471

>RPOD_METTH (O26144) DNA-directed RNA polymerase subunit D (EC 2.7.7.6)|
          Length = 264

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = +1

Query: 31  CGSLFTNCSVTICNRTDKLGQKTGIGIVYESSGISLAPVRAPTYP 165
           C    + CSV++  R      K G G+VY    +S  P   P YP
Sbjct: 85  CEEYCSECSVSLTLR------KKGPGVVYSGDLVSETPAVKPVYP 123

>HBA1_PLEWA (P06639) Hemoglobin alpha-1 subunit (Hemoglobin alpha-1 chain)|
           (Alpha-1-globin) (Hemoglobin alpha-major chain)
          Length = 141

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -3

Query: 295 IPTVPVYYPAKPQPRERAWRNQRGKKTLLSLT 200
           +PT  +Y+PAK      ++ +  GKK + +LT
Sbjct: 36  MPTTRIYFPAKDLSERSSYLHSHGKKVVGALT 67

>RL21_SYNY3 (P74266) 50S ribosomal protein L21|
          Length = 124

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +3

Query: 48  KLLGYNMQPDRQTRTKNGYRYSI 116
           K++ Y MQP ++TR K G+R  +
Sbjct: 72  KVIVYKMQPKKKTRKKRGHRQEL 94

>ZBED3_HUMAN (Q96IU2) Zinc finger BED domain-containing protein 3|
          Length = 234

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +1

Query: 172 LKSFHKVGLESSSTGSSFPADSAKPVP 252
           L+S H+  LESS  GSS PA    P P
Sbjct: 93  LRSAHRRELESSGAGSSPPAAPCPPPP 119


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,163,844
Number of Sequences: 219361
Number of extensions: 850793
Number of successful extensions: 2534
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2533
length of database: 80,573,946
effective HSP length: 85
effective length of database: 61,928,261
effective search space used: 1486278264
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)