>GLI1_MOUSE (P47806) Zinc finger protein GLI1 (Glioma-associated oncogene|
           homolog)
          Length = 1111

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 29/110 (26%), Positives = 39/110 (35%), Gaps = 12/110 (10%)
 Frame = +2

Query: 2   AHKPNRTYTLHFKFPPKLPGCV-----------HDMTVHHPH-HS*TLHGSKH*LTKTHS 145
           A   NRT++    +  KLPGC            H  TVH P  H    H     L +   
Sbjct: 352 AKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHGPDAHVTKRHRGDGPLPRAQP 411

Query: 146 IGRENKQQARAASRGKQRRAQRPAESRDPNGGPSVLCHIYSSYASDHLAA 295
           +     ++ R    G++       ES  P   P       SS +SDH  A
Sbjct: 412 LSTVEPKREREGGSGREESRLTVPESAMPQQSPGA----QSSCSSDHSPA 457

>NRAM2_MOUSE (P49282) Natural resistance-associated macrophage protein 2 (NRAMP|
           2)
          Length = 568

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 9/69 (13%)
 Frame = +2

Query: 8   KPNRTYTLHFKFPPKLPGCVHDM---------TVHHPHHS*TLHGSKH*LTKTHSIGREN 160
           KP+++  L   F P  PGC              V  PH+   LH +   L K+  + R N
Sbjct: 230 KPSQSQVLRGMFVPSCPGCRTPQVEQAVGIVGAVIMPHNM-YLHSA---LVKSRQVNRAN 285

Query: 161 KQQARAASR 187
           KQ+ R A++
Sbjct: 286 KQEVREANK 294

>SNPH_HUMAN (O15079) Syntaphilin|
          Length = 538

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +2

Query: 128 LTKTHSIGRENKQQARAASRGKQRRAQRPAESRDPNGGPSV 250
           LT+THS+   +   +R  S G +RR   P   RD  G  S+
Sbjct: 38  LTRTHSLMAMSLPGSRRTSAGSRRRTSPPVSVRDAYGTSSL 78

>EGF_RAT (P07522) Pro-epidermal growth factor precursor (EGF) [Contains:|
           Epidermal growth factor]
          Length = 1133

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
 Frame = +2

Query: 149 GRENKQQARAASRGKQRRAQ--RPAESRDPNGGPSVLCHIYS 268
           G EN+ QA  + R KQRR Q       RDPN   S     Y+
Sbjct: 306 GTENRAQASDSERCKQRRGQCLYSLSERDPNSDSSACAEGYT 347

>Y764_XANAC (Q8PPC2) UPF0102 protein XAC0764|
          Length = 122

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 18/40 (45%), Positives = 22/40 (55%)
 Frame = -1

Query: 281 RRRMNCRYGRGQRGLRWGPWTLLVFARASAFLGSPPALAA 162
           R R + R+G G   + W     LV A A  FLG+ PALAA
Sbjct: 55  RYRRDDRFGGGAASVDWRKRRKLVLA-AQLFLGAHPALAA 93

>CAC1G_RAT (O54898) Voltage-dependent T-type calcium channel alpha-1G subunit|
           (Voltage-gated calcium channel alpha subunit Cav3.1)
          Length = 2254

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 17/60 (28%), Positives = 25/60 (41%)
 Frame = +2

Query: 65  VHDMTVHHPHHS*TLHGSKH*LTKTHSIGRENKQQARAASRGKQRRAQRPAESRDPNGGP 244
           VH +  HH HH    H   H    T  + R + +     + G +R    P  +  P+GGP
Sbjct: 491 VHHLVHHHHHH----HHHYHLGNGTLRVPRASPEIQDRDANGSRRLMLPPPSTPTPSGGP 546

>ARI1B_HUMAN (Q8NFD5) AT-rich interactive domain-containing protein 1B (ARID|
           domain-containing protein 1B) (Osa homolog 2) (hOsa2)
           (p250R) (BRG1-binding protein hELD/OSA1)
           (BRG1-associated factor 250b) (BAF250B)
          Length = 2236

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
 Frame = +2

Query: 83  HHPHHS*TLHGSKH*LTKTHSIGR-----ENKQQARAASRGKQRRAQRPAESRDPNGG 241
           HH HH+   H   H L   H++ +     + +QQ +   + +Q++ Q P  + +  GG
Sbjct: 85  HHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQHPISNNNSLGG 142

>GLI1_HUMAN (P08151) Zinc finger protein GLI1 (Glioma-associated oncogene)|
           (Oncogene GLI)
          Length = 1106

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 31/111 (27%), Positives = 41/111 (36%), Gaps = 13/111 (11%)
 Frame = +2

Query: 2   AHKPNRTYTLHFKFPPKLPGCV-----------HDMTVHHPH-HS*TLHGSKH*LTKTHS 145
           A   NRT++    +  KLPGC            H  TVH P  H    H     L +  S
Sbjct: 349 AKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHGPDAHVTKRHRGDGPLPRAPS 408

Query: 146 IGR-ENKQQARAASRGKQRRAQRPAESRDPNGGPSVLCHIYSSYASDHLAA 295
           I   E K++       ++ R   P  +  P   P       SS +SDH  A
Sbjct: 409 ISTVEPKREREGGPIREESRLTVPEGAMKPQPSPGA----QSSCSSDHSPA 455


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,862,101
Number of Sequences: 219361
Number of extensions: 815772
Number of successful extensions: 2434
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2432
length of database: 80,573,946
effective HSP length: 77
effective length of database: 63,683,149
effective search space used: 1528395576
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)