>CSPG2_BOVIN (P81282) Versican core protein precursor (Large fibroblast|
            proteoglycan) (Chondroitin sulfate proteoglycan core
            protein 2) (PG-M) (Glial hyaluronate-binding protein)
            (GHAP)
          Length = 3381

 Score = 31.6 bits (70), Expect = 0.54
 Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
 Frame = +2

Query: 26   VSK-ITSVPPQTSPNHMKG--FGGYNATREVTRYSHTPHTIP 142
            VSK +++VP    P+ ++G  F  Y++T+E T Y  T HTIP
Sbjct: 942  VSKPLSTVPQFAHPSDVEGSTFVNYSSTQEPTTYVDTSHTIP 983

>BOLA_HAEIN (P43780) Protein bolA homolog|
          Length = 103

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 11/32 (34%), Positives = 22/32 (68%)
 Frame = +1

Query: 58  ISQSYERIRGLQRNKGSYKILSHTTHHSMHVL 153
           +S  ++ IR +QR++  Y++L+   +HS+H L
Sbjct: 44  VSADFKNIRKVQRHQRIYQLLNEELNHSIHAL 75

>ZN287_MOUSE (Q9EQB9) Zinc finger protein 287 (Zfp-287) (Zinc finger protein|
           SKAT-2)
          Length = 759

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +3

Query: 24  WSPK*QV-CPHKHLPII*KDSGVTTQQGKLQDT 119
           W PK Q  CP KHLP + +D    TQ  KL+D+
Sbjct: 236 WEPKAQAQCPAKHLPELKQDG---TQTVKLEDS 265

>BARD1_RAT (Q9QZH2) BRCA1-associated RING domain protein 1 (BARD-1)|
          Length = 768

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
 Frame = +3

Query: 6   ITKHCSWSPK*QVCPHKHLPII*KDSGVTTQQGKLQDTLTHH--TPFH 143
           +  H  W+P  + C H HL I+     +  Q   L +T  +H  +P H
Sbjct: 446 VKDHAGWTPLHEACSHGHLKIV----ELLLQHNALVNTTGYHNDSPLH 489


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,029,725
Number of Sequences: 219361
Number of extensions: 852093
Number of successful extensions: 2065
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2065
length of database: 80,573,946
effective HSP length: 70
effective length of database: 65,218,676
effective search space used: 1565248224
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)