>gb|AC090309.4| Homo sapiens chromosome 11, clone RP11-142C4, complete sequence
          Length = 161586

 Score = 42.1 bits (21), Expect = 0.31
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 85     atagctttctggaaaatagct 105
              |||||||||||||||||||||
Sbjct: 134992 atagctttctggaaaatagct 135012

>gb|AC090848.4| Homo sapiens chromosome 11, clone RP11-780O24, complete sequence
          Length = 169559

 Score = 42.1 bits (21), Expect = 0.31
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 85    atagctttctggaaaatagct 105
             |||||||||||||||||||||
Sbjct: 27147 atagctttctggaaaatagct 27127

>dbj|AP001652.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-780O24, complete
              sequences
          Length = 169560

 Score = 42.1 bits (21), Expect = 0.31
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 85     atagctttctggaaaatagct 105
              |||||||||||||||||||||
Sbjct: 142414 atagctttctggaaaatagct 142434

>dbj|AP001636.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-142C4, complete
              sequence
          Length = 161582

 Score = 42.1 bits (21), Expect = 0.31
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 85     atagctttctggaaaatagct 105
              |||||||||||||||||||||
Sbjct: 134988 atagctttctggaaaatagct 135008

>dbj|AP001258.4| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-103D1, complete
             sequence
          Length = 128654

 Score = 42.1 bits (21), Expect = 0.31
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 85    atagctttctggaaaatagct 105
             |||||||||||||||||||||
Sbjct: 56041 atagctttctggaaaatagct 56061



 Score = 42.1 bits (21), Expect = 0.31
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 85    atagctttctggaaaatagct 105
             |||||||||||||||||||||
Sbjct: 12310 atagctttctggaaaatagct 12330

>ref|XM_589483.2| PREDICTED: Bos taurus similar to complement component 5 (LOC512045),
            mRNA
          Length = 5407

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 87   agctttctggaaaatagctt 106
            ||||||||||||||||||||
Sbjct: 2317 agctttctggaaaatagctt 2298

>dbj|AB054132.1| Apteronotus albifrons mitochondrial DNA, nearly complete genome
          Length = 15897

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 38   atgataattagggcaagggt 57
            ||||||||||||||||||||
Sbjct: 4751 atgataattagggcaagggt 4732

>dbj|AP001006.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-687I9, complete
              sequence
          Length = 193999

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 15     atggctgaaattcccataacaaaa 38
              |||||||| |||||||||||||||
Sbjct: 115396 atggctgacattcccataacaaaa 115419

>gb|AC163094.5| Mus musculus chromosome 5, clone RP23-123P10, complete sequence
          Length = 208850

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 8      taaaattatggctgaaatt 26
              |||||||||||||||||||
Sbjct: 145480 taaaattatggctgaaatt 145462

>gb|AC169703.1| Rhesus Macaque  BAC CH250-14E24 (Children's Hospital Oakland Research
             Institute Rhesus macaque Adult Male BAC Library) complete
             sequence
          Length = 161972

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 30    ataacaaaatgataattag 48
             |||||||||||||||||||
Sbjct: 13833 ataacaaaatgataattag 13851

>gb|AY332748.1| Sus scrofa complement component C5 mRNA, complete cds
          Length = 5422

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 87   agctttctggaaaatagct 105
            |||||||||||||||||||
Sbjct: 2317 agctttctggaaaatagct 2299

>gb|AC104846.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone
             P0004C07, complete sequence
          Length = 135425

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 54    gggtgattttttgcaaaag 72
             |||||||||||||||||||
Sbjct: 74566 gggtgattttttgcaaaag 74584

>gb|AC129295.4| Mus musculus BAC clone RP24-560M23 from chromosome 1, complete sequence
          Length = 121538

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 5     ccataaaattatggctgaaattc 27
             ||||||| |||||||||||||||
Sbjct: 94412 ccataaagttatggctgaaattc 94434

>gb|AC122886.3| Mus musculus BAC clone RP23-91G21 from 13, complete sequence
          Length = 206999

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 7     ataaaattatggctgaaat 25
             |||||||||||||||||||
Sbjct: 17835 ataaaattatggctgaaat 17817

>emb|AL357513.8| Human DNA sequence from clone RP11-100A16 on chromosome 6 Contains a
              cytochrome c oxidase subunit VIa polypeptide 1 (COX6A1)
              pseudogene, complete sequence
          Length = 177645

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 29     cataacaaaatgataatta 47
              |||||||||||||||||||
Sbjct: 152527 cataacaaaatgataatta 152509

>gb|AC175112.5| Mus musculus chromosome 5, clone wi1-1409A7, complete sequence
          Length = 38028

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 8     taaaattatggctgaaatt 26
             |||||||||||||||||||
Sbjct: 23426 taaaattatggctgaaatt 23408

>gb|AC091122.10| Oryza sativa chromosome 10 BAC OSJNBb0091N21 genomic sequence, complete
             sequence
          Length = 151991

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 20    tgaaattcccataacaaaa 38
             |||||||||||||||||||
Sbjct: 31222 tgaaattcccataacaaaa 31240

>gb|AC090701.5| Homo sapiens chromosome 18, clone RP11-810M21, complete sequence
          Length = 188779

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 27    cccataacaaaatgataat 45
             |||||||||||||||||||
Sbjct: 86105 cccataacaaaatgataat 86087

>dbj|AK090521.1| Homo sapiens cDNA FLJ33202 fis, clone ADRGL2006886, highly similar to
            Homo sapiens apamin-sensitive small-conductance
            Ca2+-activated potassium channel (KCNN2) mRNA
          Length = 2162

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 42   taattagggcaagggtgattttt 64
            |||||||||||||||| ||||||
Sbjct: 1193 taattagggcaagggtaattttt 1171

>gb|AC109482.3| Homo sapiens chromosome 5 clone RP11-492A10, complete sequence
          Length = 101941

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 42    taattagggcaagggtgattttt 64
             |||||||||||||||| ||||||
Sbjct: 84264 taattagggcaagggtaattttt 84242

>gb|AF312225.1|AF312225 Homo sapiens chromosome 2 map 2q37.1, complete sequence
          Length = 345102

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 22     aaattcccataacaaaatg 40
              |||||||||||||||||||
Sbjct: 134920 aaattcccataacaaaatg 134902

>gb|AC019130.6| Homo sapiens BAC clone RP11-563E16 from 2, complete sequence
          Length = 139049

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 22     aaattcccataacaaaatg 40
              |||||||||||||||||||
Sbjct: 138017 aaattcccataacaaaatg 137999

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 54       gggtgattttttgcaaaag 72
                |||||||||||||||||||
Sbjct: 24473475 gggtgattttttgcaaaag 24473493

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 20       tgaaattcccataacaaaa 38
                |||||||||||||||||||
Sbjct: 19047442 tgaaattcccataacaaaa 19047424

>gb|AC156995.6| Mus musculus chromosome 5, clone RP23-77E18, complete sequence
          Length = 138507

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 8      taaaattatggctgaaatt 26
              |||||||||||||||||||
Sbjct: 128542 taaaattatggctgaaatt 128560

>gb|AC157660.2| Mus musculus BAC clone RP23-263I16 from chromosome 1, complete
            sequence
          Length = 192026

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 5    ccataaaattatggctgaaattc 27
            ||||||| |||||||||||||||
Sbjct: 5640 ccataaagttatggctgaaattc 5618

>ref|NM_001001646.1| Sus scrofa complement component C5 (C5), mRNA
          Length = 5422

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 87   agctttctggaaaatagct 105
            |||||||||||||||||||
Sbjct: 2317 agctttctggaaaatagct 2299

>gb|AC138658.1| Homo sapiens BAC clone RP11-95H14 from 2, complete sequence
          Length = 72643

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 22  aaattcccataacaaaatg 40
           |||||||||||||||||||
Sbjct: 968 aaattcccataacaaaatg 950

>dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome
          Length = 1738505

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 8       taaaattatggctgaaattccca 30
               |||||||||||| ||||||||||
Sbjct: 1728883 taaaattatggccgaaattccca 1728905

>gb|AC153016.2| Mus musculus BAC clone RP23-182K18 from 13, complete sequence
          Length = 224420

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 7      ataaaattatggctgaaat 25
              |||||||||||||||||||
Sbjct: 220804 ataaaattatggctgaaat 220786

>gb|AC007631.3|AC007631 Genomic sequence of Homo sapiens clone R145D03A from chromosome 18,
             complete sequence
          Length = 146596

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 27    cccataacaaaatgataat 45
             |||||||||||||||||||
Sbjct: 79568 cccataacaaaatgataat 79586

>emb|CR555298.10| Zebrafish DNA sequence from clone CH211-25D12 in linkage group 11,
            complete sequence
          Length = 183135

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 28   ccataacaaaatgataatt 46
            |||||||||||||||||||
Sbjct: 2990 ccataacaaaatgataatt 2972

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 20       tgaaattcccataacaaaa 38
                |||||||||||||||||||
Sbjct: 19058696 tgaaattcccataacaaaa 19058678

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 54       gggtgattttttgcaaaag 72
                |||||||||||||||||||
Sbjct: 24785144 gggtgattttttgcaaaag 24785162

>gb|AC148982.4| Mus musculus BAC clone RP23-174I22 from 1, complete sequence
          Length = 195580

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 5      ccataaaattatggctgaaattc 27
              ||||||| |||||||||||||||
Sbjct: 170652 ccataaagttatggctgaaattc 170630


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,204,380
Number of Sequences: 3902068
Number of extensions: 1204380
Number of successful extensions: 88652
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88492
Number of HSP's gapped (non-prelim): 160
length of query: 107
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 86
effective length of database: 17,151,101,840
effective search space: 1474994758240
effective search space used: 1474994758240
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)