>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  141 bits (71), Expect = 2e-30
 Identities = 89/95 (93%)
 Strand = Plus / Minus

                                                                            
Query: 194      ttccaggcgtagacgaggagcgagaagccatcgccgcggtgcagctcggcctcctcgggg 253
                |||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||
Sbjct: 14863930 ttccaggcgtagacgaggagggagaagccatggccgcgctgcagctcggcctcctcgggg 14863871

                                                   
Query: 254      ctggcccagtccatgaccgtcgagctgctcgccca 288
                || ||||||||||| |||||||||| |||||||||
Sbjct: 14863870 ctcgcccagtccatcaccgtcgagccgctcgccca 14863836



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 48/51 (94%), Gaps = 1/51 (1%)
 Strand = Plus / Minus

                                                                   
Query: 34       aaaactgcacaagaacatttgctcggagaacaactgcaacttacaacaatc 84
                ||||||||||||||||||| ||||||| ||||| |||||||||||||||||
Sbjct: 14864080 aaaactgcacaagaacatt-gctcggataacaattgcaacttacaacaatc 14864031

>dbj|AP005636.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0707C02
          Length = 163609

 Score =  141 bits (71), Expect = 2e-30
 Identities = 89/95 (93%)
 Strand = Plus / Minus

                                                                          
Query: 194    ttccaggcgtagacgaggagcgagaagccatcgccgcggtgcagctcggcctcctcgggg 253
              |||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||
Sbjct: 149319 ttccaggcgtagacgaggagggagaagccatggccgcgctgcagctcggcctcctcgggg 149260

                                                 
Query: 254    ctggcccagtccatgaccgtcgagctgctcgccca 288
              || ||||||||||| |||||||||| |||||||||
Sbjct: 149259 ctcgcccagtccatcaccgtcgagccgctcgccca 149225



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 48/51 (94%), Gaps = 1/51 (1%)
 Strand = Plus / Minus

                                                                 
Query: 34     aaaactgcacaagaacatttgctcggagaacaactgcaacttacaacaatc 84
              ||||||||||||||||||| ||||||| ||||| |||||||||||||||||
Sbjct: 149469 aaaactgcacaagaacatt-gctcggataacaattgcaacttacaacaatc 149420

>dbj|AP005784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0014G10
          Length = 164147

 Score =  141 bits (71), Expect = 2e-30
 Identities = 89/95 (93%)
 Strand = Plus / Minus

                                                                         
Query: 194   ttccaggcgtagacgaggagcgagaagccatcgccgcggtgcagctcggcctcctcgggg 253
             |||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||
Sbjct: 72269 ttccaggcgtagacgaggagggagaagccatggccgcgctgcagctcggcctcctcgggg 72210

                                                
Query: 254   ctggcccagtccatgaccgtcgagctgctcgccca 288
             || ||||||||||| |||||||||| |||||||||
Sbjct: 72209 ctcgcccagtccatcaccgtcgagccgctcgccca 72175



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 48/51 (94%), Gaps = 1/51 (1%)
 Strand = Plus / Minus

                                                                
Query: 34    aaaactgcacaagaacatttgctcggagaacaactgcaacttacaacaatc 84
             ||||||||||||||||||| ||||||| ||||| |||||||||||||||||
Sbjct: 72419 aaaactgcacaagaacatt-gctcggataacaattgcaacttacaacaatc 72370

>dbj|AK106445.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-E02, full
            insert sequence
          Length = 1598

 Score =  141 bits (71), Expect = 2e-30
 Identities = 89/95 (93%)
 Strand = Plus / Minus

                                                                        
Query: 194  ttccaggcgtagacgaggagcgagaagccatcgccgcggtgcagctcggcctcctcgggg 253
            |||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||
Sbjct: 1446 ttccaggcgtagacgaggagggagaagccatggccgcgctgcagctcggcctcctcgggg 1387

                                               
Query: 254  ctggcccagtccatgaccgtcgagctgctcgccca 288
            || ||||||||||| |||||||||| |||||||||
Sbjct: 1386 ctcgcccagtccatcaccgtcgagccgctcgccca 1352



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 48/51 (94%), Gaps = 1/51 (1%)
 Strand = Plus / Minus

                                                               
Query: 34   aaaactgcacaagaacatttgctcggagaacaactgcaacttacaacaatc 84
            ||||||||||||||||||| ||||||| ||||| |||||||||||||||||
Sbjct: 1596 aaaactgcacaagaacatt-gctcggataacaattgcaacttacaacaatc 1547

>dbj|AK101668.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058C01, full
            insert sequence
          Length = 1285

 Score =  141 bits (71), Expect = 2e-30
 Identities = 89/95 (93%)
 Strand = Plus / Minus

                                                                        
Query: 194  ttccaggcgtagacgaggagcgagaagccatcgccgcggtgcagctcggcctcctcgggg 253
            |||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||
Sbjct: 1133 ttccaggcgtagacgaggagggagaagccatggccgcgctgcagctcggcctcctcgggg 1074

                                               
Query: 254  ctggcccagtccatgaccgtcgagctgctcgccca 288
            || ||||||||||| |||||||||| |||||||||
Sbjct: 1073 ctcgcccagtccatcaccgtcgagccgctcgccca 1039



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 48/51 (94%), Gaps = 1/51 (1%)
 Strand = Plus / Minus

                                                               
Query: 34   aaaactgcacaagaacatttgctcggagaacaactgcaacttacaacaatc 84
            ||||||||||||||||||| ||||||| ||||| |||||||||||||||||
Sbjct: 1283 aaaactgcacaagaacatt-gctcggataacaattgcaacttacaacaatc 1234

>gb|AY112651.1| Zea mays CL67957_1 mRNA sequence
          Length = 356

 Score =  109 bits (55), Expect = 6e-21
 Identities = 82/91 (90%)
 Strand = Plus / Plus

                                                                       
Query: 188 tagctcttccaggcgtagacgaggagcgagaagccatcgccgcggtgcagctcggcctcc 247
           |||||||||||||||||||  || ||||||||||| |||||||| |||| |||| |||||
Sbjct: 208 tagctcttccaggcgtagatcagcagcgagaagccgtcgccgcgctgcatctcgacctcc 267

                                          
Query: 248 tcggggctggcccagtccatgaccgtcgagc 278
           |||||||||||||||||||| ||||| ||||
Sbjct: 268 tcggggctggcccagtccatcaccgtggagc 298

>ref|XM_482604.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1221

 Score =  101 bits (51), Expect = 1e-18
 Identities = 84/95 (88%)
 Strand = Plus / Minus

                                                                        
Query: 194  ttccaggcgtagacgaggagcgagaagccatcgccgcggtgcagctcggcctcctcgggg 253
            ||||| |||||||  ||||| ||||||||||||||||| |||| ||||||||||||||||
Sbjct: 1214 ttccatgcgtagatcaggagggagaagccatcgccgcgctgcatctcggcctcctcgggg 1155

                                               
Query: 254  ctggcccagtccatgaccgtcgagctgctcgccca 288
            || |||||||||||||| || |||| ||| |||||
Sbjct: 1154 ctcgcccagtccatgacggtggagccgctggccca 1120

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  101 bits (51), Expect = 1e-18
 Identities = 84/95 (88%)
 Strand = Plus / Minus

                                                                            
Query: 194      ttccaggcgtagacgaggagcgagaagccatcgccgcggtgcagctcggcctcctcgggg 253
                ||||| |||||||  ||||| ||||||||||||||||| |||| ||||||||||||||||
Sbjct: 21387461 ttccatgcgtagatcaggagggagaagccatcgccgcgctgcatctcggcctcctcgggg 21387402

                                                   
Query: 254      ctggcccagtccatgaccgtcgagctgctcgccca 288
                || |||||||||||||| || |||| ||| |||||
Sbjct: 21387401 ctcgcccagtccatgacggtggagccgctggccca 21387367

>dbj|AP004702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0524F03
          Length = 167696

 Score =  101 bits (51), Expect = 1e-18
 Identities = 84/95 (88%)
 Strand = Plus / Minus

                                                                         
Query: 194   ttccaggcgtagacgaggagcgagaagccatcgccgcggtgcagctcggcctcctcgggg 253
             ||||| |||||||  ||||| ||||||||||||||||| |||| ||||||||||||||||
Sbjct: 87386 ttccatgcgtagatcaggagggagaagccatcgccgcgctgcatctcggcctcctcgggg 87327

                                                
Query: 254   ctggcccagtccatgaccgtcgagctgctcgccca 288
             || |||||||||||||| || |||| ||| |||||
Sbjct: 87326 ctcgcccagtccatgacggtggagccgctggccca 87292

>gb|AC010809.10| Homo sapiens, clone RP11-3D4, complete sequence
          Length = 173087

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 29     cactcaaaactgcacaagaacat 51
              |||||||||||||||||||||||
Sbjct: 135049 cactcaaaactgcacaagaacat 135027

>ref|XM_604162.2| PREDICTED: Bos taurus hypothetical LOC525806 (LOC525806), mRNA
          Length = 2748

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 238  ctcggcctcctcggggctggcc 259
            ||||||||||||||||||||||
Sbjct: 1671 ctcggcctcctcggggctggcc 1692

>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 234     gcagctcggcctcctcggggctggc 258
               ||||| |||||||||||||||||||
Sbjct: 2977963 gcagcgcggcctcctcggggctggc 2977987

>gb|AC140332.3| Mus musculus BAC clone RP23-408K9 from chromosome 19, complete sequence
          Length = 206515

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 177    ggctggctagctagctcttcc 197
              |||||||||||||||||||||
Sbjct: 108436 ggctggctagctagctcttcc 108416

>gb|AC003694.1|AC003694 Mus musculus chromosome 19, clone CIT282B21, complete sequence
          Length = 186314

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 177    ggctggctagctagctcttcc 197
              |||||||||||||||||||||
Sbjct: 146356 ggctggctagctagctcttcc 146336

>ref|XM_478833.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2030

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 228  cgcggtgcagctcggcctcctcgg 251
            ||||||||||||||||||| ||||
Sbjct: 1515 cgcggtgcagctcggcctcgtcgg 1492

>gb|AC144928.17| Medicago truncatula clone mth2-8a18, complete sequence
          Length = 138948

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 26   cagcactcaaaactgcacaa 45
            ||||||||||||||||||||
Sbjct: 7938 cagcactcaaaactgcacaa 7919

>ref|XM_795462.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
           LOC589412 (LOC589412), mRNA
          Length = 1094

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 244 ctcctcggggctggcccagt 263
           ||||||||||||||||||||
Sbjct: 363 ctcctcggggctggcccagt 344

>ref|XM_789481.1| PREDICTED: Strongylocentrotus purpuratus similar to CG2708-PA
            (LOC589849), mRNA
          Length = 3163

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 244  ctcctcggggctggcccagt 263
            ||||||||||||||||||||
Sbjct: 2430 ctcctcggggctggcccagt 2411

>emb|CR848717.7| Zebrafish DNA sequence from clone DKEY-148B12 in linkage group 5,
             complete sequence
          Length = 207800

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    aaaactgcacaagaacattt 53
             ||||||||||||||||||||
Sbjct: 88575 aaaactgcacaagaacattt 88556

>gb|AC103585.2| Homo sapiens chromosome 3 clone RP11-48D9, complete sequence
          Length = 184596

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 29    cactcaaaactgcacaagaacatt 52
             ||||||||||||||||| ||||||
Sbjct: 85744 cactcaaaactgcacaacaacatt 85721

>gb|AC113338.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone
             OSJNBa0091J06 from chromosome 10, complete sequence
          Length = 141911

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   gccggccggccggcagcttc 161
             ||||||||||||||||||||
Sbjct: 71094 gccggccggccggcagcttc 71075

>gb|AF022981.3| Caenorhabditis elegans cosmid W03F9, complete sequence
          Length = 42879

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    ggagatgaagctcccactga 105
             ||||||||||||||||||||
Sbjct: 16921 ggagatgaagctcccactga 16940

>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 265     catgaccgtcgagctgctcg 284
               ||||||||||||||||||||
Sbjct: 5028067 catgaccgtcgagctgctcg 5028048

>ref|NM_001038418.1| Caenorhabditis elegans W03F9.11 (W03F9.11) mRNA, complete cds
          Length = 609

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 86  ggagatgaagctcccactga 105
           ||||||||||||||||||||
Sbjct: 74  ggagatgaagctcccactga 55

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 142      gccggccggccggcagcttc 161
                ||||||||||||||||||||
Sbjct: 11378023 gccggccggccggcagcttc 11378004

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 228      cgcggtgcagctcggcctcctcgg 251
                ||||||||||||||||||| ||||
Sbjct: 23272135 cgcggtgcagctcggcctcgtcgg 23272158

>gb|AC091132.16| Homo sapiens chromosome 17, clone RP11-798G7, complete sequence
          Length = 207611

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 243    cctcctcggggctggcccagtcca 266
              |||||||||||||||| |||||||
Sbjct: 162796 cctcctcggggctggcacagtcca 162819

>gb|AC003070.2| Homo sapiens chromosome 17, clone CTB-39G8, complete sequence
          Length = 107217

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 243  cctcctcggggctggcccagtcca 266
            |||||||||||||||| |||||||
Sbjct: 3795 cctcctcggggctggcacagtcca 3818

>gb|AF210249.1|AF210249 Streptomyces verticillus bleomycin biosynthetic gene cluster, complete
             cds
          Length = 77457

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 160   tccgccgacgccgtcgtggc 179
             ||||||||||||||||||||
Sbjct: 11949 tccgccgacgccgtcgtggc 11930

>dbj|AP003804.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1065_B06
          Length = 113170

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 228   cgcggtgcagctcggcctcctcgg 251
             ||||||||||||||||||| ||||
Sbjct: 27393 cgcggtgcagctcggcctcgtcgg 27416

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 231     ggtgcagctcggcctcctcg 250
               ||||||||||||||||||||
Sbjct: 8159138 ggtgcagctcggcctcctcg 8159157

>dbj|AK106839.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-H03, full
            insert sequence
          Length = 2031

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 228  cgcggtgcagctcggcctcctcgg 251
            ||||||||||||||||||| ||||
Sbjct: 1516 cgcggtgcagctcggcctcgtcgg 1493

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 142      gccggccggccggcagcttc 161
                ||||||||||||||||||||
Sbjct: 11384463 gccggccggccggcagcttc 11384444

>gb|AC133709.11| Medicago truncatula clone mth2-7b3, complete sequence
          Length = 138950

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 26     cagcactcaaaactgcacaa 45
              ||||||||||||||||||||
Sbjct: 131013 cagcactcaaaactgcacaa 131032


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,634,171
Number of Sequences: 3902068
Number of extensions: 2634171
Number of successful extensions: 60907
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60488
Number of HSP's gapped (non-prelim): 414
length of query: 325
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 303
effective length of database: 17,147,199,772
effective search space: 5195601530916
effective search space used: 5195601530916
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)