>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  176 bits (89), Expect = 3e-41
 Identities = 165/187 (88%), Gaps = 5/187 (2%)
 Strand = Plus / Plus

                                                                            
Query: 156      aagtacatgtctagtgaagagttcccataaaagactaatctagcttcatttatctcttaa 215
                ||||||||||||| ||||||| || || |||| ||||| ||||||| | ||||||  |||
Sbjct: 24365362 aagtacatgtctaatgaagagatctcagaaaacactaagctagcttgaattatcttgtaa 24365421

                                                                            
Query: 216      cagcgaaaactcagagcaaaa--ctgatttccagatcagaggtagccagaatatgcaaga 273
                |||  |||| | |||||||||  |||||||||| |||||||| |||||||||||||||||
Sbjct: 24365422 caga-aaaattgagagcaaaaaactgatttccatatcagaggcagccagaatatgcaaga 24365480

                                                                            
Query: 274      catccatgcatgcagacaacacttctgaattcagcacaaccattcaaagcatatgctccc 333
                |||||||| | |||||||||  ||||||||||||||||||||||||||||||||||||||
Sbjct: 24365481 catccatgtaagcagacaac--ttctgaattcagcacaaccattcaaagcatatgctccc 24365538

                       
Query: 334      aagagtt 340
                |||||||
Sbjct: 24365539 aagagtt 24365545

>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0410E01
          Length = 166753

 Score =  176 bits (89), Expect = 3e-41
 Identities = 165/187 (88%), Gaps = 5/187 (2%)
 Strand = Plus / Plus

                                                                          
Query: 156    aagtacatgtctagtgaagagttcccataaaagactaatctagcttcatttatctcttaa 215
              ||||||||||||| ||||||| || || |||| ||||| ||||||| | ||||||  |||
Sbjct: 111266 aagtacatgtctaatgaagagatctcagaaaacactaagctagcttgaattatcttgtaa 111325

                                                                          
Query: 216    cagcgaaaactcagagcaaaa--ctgatttccagatcagaggtagccagaatatgcaaga 273
              |||  |||| | |||||||||  |||||||||| |||||||| |||||||||||||||||
Sbjct: 111326 caga-aaaattgagagcaaaaaactgatttccatatcagaggcagccagaatatgcaaga 111384

                                                                          
Query: 274    catccatgcatgcagacaacacttctgaattcagcacaaccattcaaagcatatgctccc 333
              |||||||| | |||||||||  ||||||||||||||||||||||||||||||||||||||
Sbjct: 111385 catccatgtaagcagacaac--ttctgaattcagcacaaccattcaaagcatatgctccc 111442

                     
Query: 334    aagagtt 340
              |||||||
Sbjct: 111443 aagagtt 111449

>dbj|AK120636.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153K01, full
            insert sequence
          Length = 1754

 Score =  176 bits (89), Expect = 3e-41
 Identities = 165/187 (88%), Gaps = 5/187 (2%)
 Strand = Plus / Minus

                                                                        
Query: 156  aagtacatgtctagtgaagagttcccataaaagactaatctagcttcatttatctcttaa 215
            ||||||||||||| ||||||| || || |||| ||||| ||||||| | ||||||  |||
Sbjct: 1606 aagtacatgtctaatgaagagatctcagaaaacactaagctagcttgaattatcttgtaa 1547

                                                                        
Query: 216  cagcgaaaactcagagcaaaa--ctgatttccagatcagaggtagccagaatatgcaaga 273
            |||  |||| | |||||||||  |||||||||| |||||||| |||||||||||||||||
Sbjct: 1546 caga-aaaattgagagcaaaaaactgatttccatatcagaggcagccagaatatgcaaga 1488

                                                                        
Query: 274  catccatgcatgcagacaacacttctgaattcagcacaaccattcaaagcatatgctccc 333
            |||||||| | |||||||||  ||||||||||||||||||||||||||||||||||||||
Sbjct: 1487 catccatgtaagcagacaac--ttctgaattcagcacaaccattcaaagcatatgctccc 1430

                   
Query: 334  aagagtt 340
            |||||||
Sbjct: 1429 aagagtt 1423

>gb|AY107610.1| Zea mays PCO082984 mRNA sequence
          Length = 697

 Score =  143 bits (72), Expect = 4e-31
 Identities = 94/100 (94%), Gaps = 1/100 (1%)
 Strand = Plus / Minus

                                                                       
Query: 242 ttccagatcagaggtagccagaatatgcaagacatccatgcatgcagacaacacttctga 301
           |||||||||||| |||||||||||||||||| |||||||| | |||||||||||||||||
Sbjct: 422 ttccagatcagaagtagccagaatatgcaaggcatccatgtaagcagacaacacttctga 363

                                                   
Query: 302 attcagcacaacca-ttcaaagcatatgctcccaagagtt 340
           |||||||||||||| ||||||| |||||||||||||||||
Sbjct: 362 attcagcacaaccatttcaaaggatatgctcccaagagtt 323

>gb|AC066614.8| Homo sapiens chromosome 15 clone RP11-80G8 map 15q21.3, complete
             sequence
          Length = 176626

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 232   caaaactgatttccagatcagagg 255
             ||||||||||||||||||||||||
Sbjct: 67722 caaaactgatttccagatcagagg 67699

>ref|XM_445274.1| Candida glabrata CBS138, CAGL0C02255g partial mRNA
          Length = 1947

 Score = 46.1 bits (23), Expect = 0.073
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 73   acttggtatcacaagacaataca 95
            |||||||||||||||||||||||
Sbjct: 1231 acttggtatcacaagacaataca 1253

>emb|CR380949.1| Candida glabrata strain CBS138 chromosome C complete sequence
          Length = 558804

 Score = 46.1 bits (23), Expect = 0.073
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 73     acttggtatcacaagacaataca 95
              |||||||||||||||||||||||
Sbjct: 228725 acttggtatcacaagacaataca 228703

>gb|AC127297.4| Mus musculus BAC clone RP23-395B13 from chromosome 3, complete sequence
          Length = 222889

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 239    gatttccagatcagaggtagcc 260
              ||||||||||||||||||||||
Sbjct: 128792 gatttccagatcagaggtagcc 128813

>gb|AC159225.4| Mus musculus chromosome 1, clone RP24-306F17, complete sequence
          Length = 168805

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 96     caagaacataaaaatgatgat 116
              |||||||||||||||||||||
Sbjct: 141352 caagaacataaaaatgatgat 141372

>gb|AC079630.18| Homo sapiens 12 BAC RP11-476D10 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 178388

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 242   ttccagatcagaggtagccagaatatgca 270
             |||||||||| |||||||||||| |||||
Sbjct: 42507 ttccagatcaaaggtagccagaaaatgca 42535

>gb|AC102621.12| Mus musculus chromosome 1, clone RP23-429G8, complete sequence
          Length = 175286

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 96   caagaacataaaaatgatgat 116
            |||||||||||||||||||||
Sbjct: 1738 caagaacataaaaatgatgat 1758

>dbj|AB090307.1| Bombyx mori Bmfkbp13, Bmhepa, Bmhig, Bm6922, Bmlap, Bmprojectin,
              Bmkettin, Bmtitin1 genes, partial and complete cds
          Length = 160000

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 107    aaatgatgattcgggtattta 127
              |||||||||||||||||||||
Sbjct: 113123 aaatgatgattcgggtattta 113143

>dbj|AB079865.1| Bombyx mori gene for BMKETTIN, complete cds
          Length = 29280

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 107   aaatgatgattcgggtattta 127
             |||||||||||||||||||||
Sbjct: 19280 aaatgatgattcgggtattta 19300

>dbj|AB026191.1| Bombyx mori mRNA for BM KETTIN, partial cds
          Length = 1405

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 107 aaatgatgattcgggtattta 127
           |||||||||||||||||||||
Sbjct: 369 aaatgatgattcgggtattta 389

>emb|AL840642.7| Mouse DNA sequence from clone RP23-14P24 on chromosome X, complete
             sequence
          Length = 133498

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 228   agagcaaaactgatttccaga 248
             |||||||||||||||||||||
Sbjct: 67376 agagcaaaactgatttccaga 67396

>gb|AC153973.33| Mus musculus 10 BAC RP24-158P6 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 164139

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 89     caatacacaagaacataaaa 108
              ||||||||||||||||||||
Sbjct: 147426 caatacacaagaacataaaa 147407

>gb|AC132837.11| Mus musculus chromosome 18, clone RP24-490M12, complete sequence
          Length = 139563

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 273    acatccatgcatgcagacaacact 296
              |||| |||||||||||||||||||
Sbjct: 123117 acatacatgcatgcagacaacact 123140

>gb|AC113022.7| Mus musculus chromosome 5, clone RP23-187D22, complete sequence
          Length = 210968

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 4      gatatcactcatacatataa 23
              ||||||||||||||||||||
Sbjct: 114750 gatatcactcatacatataa 114769

>gb|AC113285.9| Mus musculus chromosome 5, clone RP23-407I6, complete sequence
          Length = 283052

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 93     acacaagaacataaaaatga 112
              ||||||||||||||||||||
Sbjct: 211324 acacaagaacataaaaatga 211305

>gb|AC121862.3| Mus musculus BAC clone RP24-110E10 from chromosome 14, complete
             sequence
          Length = 178501

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 91    atacacaagaacataaaaat 110
             ||||||||||||||||||||
Sbjct: 51293 atacacaagaacataaaaat 51274

>gb|AC129607.3| Mus musculus BAC clone RP23-133N3 from 5, complete sequence
          Length = 186120

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 95    acaagaacataaaaatgatg 114
             ||||||||||||||||||||
Sbjct: 49578 acaagaacataaaaatgatg 49597

>emb|CR709528.2|CNS0GAF8 Tetraodon nigroviridis full-length cDNA
          Length = 460

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 97  aagaacataaaaatgatgat 116
           ||||||||||||||||||||
Sbjct: 354 aagaacataaaaatgatgat 335

>gb|AC006269.13| Homo sapiens chromosome , clone RP11-515E23, complete sequence
          Length = 167229

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 198   gcttcatttatctcttaaca 217
             ||||||||||||||||||||
Sbjct: 84026 gcttcatttatctcttaaca 84045

>emb|BX321886.14| Zebrafish DNA sequence from clone DKEYP-46C9 in linkage group 8,
             complete sequence
          Length = 168093

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 291   aacacttctgaattcagcac 310
             ||||||||||||||||||||
Sbjct: 92671 aacacttctgaattcagcac 92652

>dbj|AK147568.1| Mus musculus cDNA, RIKEN full-length enriched library,
            clone:M5C1080J15 product:ubiquitin-conjugating enzyme E2D
            2, full insert sequence
          Length = 8158

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 273  acatccatgcatgcagacaacact 296
            |||| |||||||||||||||||||
Sbjct: 4289 acatacatgcatgcagacaacact 4312

>gb|AC092392.2| Homo sapiens chromosome 1 clone RP4-544H6, complete sequence
          Length = 98286

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 164   gtctagtgaagagttcccat 183
             ||||||||||||||||||||
Sbjct: 61533 gtctagtgaagagttcccat 61552

>dbj|AK036426.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched
            library, clone:9830106E01 product:vacuolar protein
            sorting 29 (S. pombe), full insert sequence
          Length = 2036

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 93   acacaagaacataaaaatga 112
            ||||||||||||||||||||
Sbjct: 1117 acacaagaacataaaaatga 1136

>gb|AC160147.6| Mus musculus 10 BAC RP24-576A6 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 145198

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 89     caatacacaagaacataaaa 108
              ||||||||||||||||||||
Sbjct: 114978 caatacacaagaacataaaa 114997

>gb|AC104838.3| Homo sapiens chromosome 1 clone RP4-671I22, complete sequence
          Length = 143280

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 164  gtctagtgaagagttcccat 183
            ||||||||||||||||||||
Sbjct: 4832 gtctagtgaagagttcccat 4851

>emb|BX629358.1|CNS09SBU Tetraodon nigroviridis BAC sequence
          Length = 157345

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 266    atgcaagacatccatgcatg 285
              ||||||||||||||||||||
Sbjct: 103126 atgcaagacatccatgcatg 103145

>emb|AL513143.3|CNS07EFO Human chromosome 14 DNA sequence BAC R-611H21 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 155584

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 296   ttctgaattcagcacaacca 315
             ||||||||||||||||||||
Sbjct: 23618 ttctgaattcagcacaacca 23637

>emb|AL157690.7|CNS01RG2 Human chromosome 14 DNA sequence BAC R-565E24 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 163398

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 296   ttctgaattcagcacaacca 315
             ||||||||||||||||||||
Sbjct: 97113 ttctgaattcagcacaacca 97094


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,452,204
Number of Sequences: 3902068
Number of extensions: 3452204
Number of successful extensions: 69873
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69790
Number of HSP's gapped (non-prelim): 76
length of query: 340
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 318
effective length of database: 17,147,199,772
effective search space: 5452809527496
effective search space used: 5452809527496
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)